BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011249
(490 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356498888|ref|XP_003518279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 552
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 280/536 (52%), Positives = 360/536 (67%), Gaps = 58/536 (10%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTL-TKPHDQYHYY-AQFLIRLLQLPGD--NLSYARQVFDQ 61
L+ +KT + LKQ H+ LK L +P YHY+ + L ++L+ G+ NL YA Q+FD
Sbjct: 10 LLNAAKTIDHLKQTHALFLKLLRQQPPHHYHYFMGRLLHQVLRCTGEKTNLCYAHQLFDT 69
Query: 62 IPKCKTQFLWTSLIRNHVLH-AHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
+P C + FLWTSLIR + H AH I Y++MH+ GVL SGFTFSS+L+AC RVP+L
Sbjct: 70 MPNCPSSFLWTSLIRALLSHQAHLHHCISTYSRMHQNGVLPSGFTFSSILSACGRVPALF 129
Query: 121 E----------------------------------------------------AVICGYT 128
E A++CGY
Sbjct: 130 EGKQVHARVMQSGFHGNKIVQTALLDMYAKSGCISDARAVFDGMDDRDVVAWTAMVCGYA 189
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K+G+M DAQ LFD M ERN +W+AMVAGYANC +MK AK+ YD M +KN VTWVAMIAG
Sbjct: 190 KVGMMVDAQWLFDKMGERNSFTWTAMVAGYANCEDMKTAKKLYDVMNDKNEVTWVAMIAG 249
Query: 189 YGKCGEVREAKKVFDEISEPD-ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
YGK G VREA++VFD I P AS AAM CY Q+GYAK AI+MY+ MR+ ++I+EVA
Sbjct: 250 YGKLGNVREARRVFDGIPVPQGASACAAMLACYAQHGYAKEAIDMYEKMREAKIKITEVA 309
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
MVGAISAC QL D+ M+ L H++EGCCDRT+ VS ALIHMHSKCG ++LA EF+ ++
Sbjct: 310 MVGAISACAQLRDIRMSNTLTGHLEEGCCDRTHIVSTALIHMHSKCGNINLALSEFTTMR 369
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+DV +YS+MI AFA+HGKSQ+A+D+FLKM+ EG++PNQVTFIGVL AC G +E+GC+
Sbjct: 370 YRDVYTYSAMIAAFAEHGKSQDAIDLFLKMQKEGLKPNQVTFIGVLNACGSSGYIEEGCR 429
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F++MT VFGI+PL EH TC+VDLLG++GQLE+A+ LI DA TWG+LL C+++
Sbjct: 430 FFQIMTGVFGIEPLPEHYTCIVDLLGKAGQLERAYDLIKQNASSADATTWGSLLATCRLY 489
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
N ELGEIAARHL E+ PE +GN LLAN YAS KW+ ++ VK +ISE KK P
Sbjct: 490 GNVELGEIAARHLFEIDPEDSGNYVLLANTYASKDKWEHAQEVKKLISEKGMKKKP 545
>gi|357480561|ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511621|gb|AES92763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 598
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/537 (51%), Positives = 359/537 (66%), Gaps = 61/537 (11%)
Query: 10 SKTFNQLKQVHSYLLKTLTK--PHDQYHYYAQFLIRLLQLPGD--NLSYARQVFDQIPKC 65
+K + LKQ+H+ LK L + PH H++ + L R+L + NL YA ++FD +P C
Sbjct: 20 AKNISHLKQIHALFLKHLPQNAPH---HFFDRLLFRVLHFSAEKSNLYYAHKLFDTMPNC 76
Query: 66 KTQFLWTSLIRNHVLH-AHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--- 121
F+WTSLIR + H HFR I +A MH+ G+L SGFTFSSVLNAC RVP++ E
Sbjct: 77 SNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPAVFEGKQ 136
Query: 122 -------------------------------------------------AVICGYTKIGL 132
A+ICGY K G
Sbjct: 137 VHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGR 196
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
M DA+ LFD+M ERN +W+ MVAGYAN G+MKAA E YD M K VTWVAMIAGYGK
Sbjct: 197 MVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWVAMIAGYGKL 256
Query: 193 GEVREAKKVFDEISEP-DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
G V EA+++FDEI P + S AA+ CY QNG+A+ AIEMY+ MR+ +++++VAMVGA
Sbjct: 257 GNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGA 316
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
ISAC QL D+ M+ +L ++EG C++T+ VSNALIHM SKCG +DLAWREF+ ++N+D+
Sbjct: 317 ISACAQLRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDL 376
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+YS+MI AFA+HGKSQ+A+D+FLKM+ EG+ PNQVTF+GVL ACS GL+E+GC+ F++
Sbjct: 377 YTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRFFQI 436
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
MT V+GI+PL EH TCMVDLLGR+GQLEKA+SLI + DA TWG+LL AC+V+ N E
Sbjct: 437 MTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYGNVE 496
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LGEIAARHL E+ P +GN LLAN YAS KW+ +E VK ++S+ KK G SWI
Sbjct: 497 LGEIAARHLFEIDPTDSGNYVLLANTYASNDKWERAEEVKKLMSKKGMKKPSGYSWI 553
>gi|357445603|ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360447|gb|ABN08457.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355482127|gb|AES63330.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 558
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/541 (50%), Positives = 361/541 (66%), Gaps = 61/541 (11%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTK--PHDQYHYYAQFLIRLLQLPGD--NLSYARQVFDQ 61
+ +K + LKQ+H+ LK L + PH H++ + L R+L + NL YA ++FD
Sbjct: 16 FLNNAKNISHLKQIHALFLKHLPQNAPH---HFFNRLLFRVLHFSAEKSNLYYAHKLFDT 72
Query: 62 IPKCKTQFLWTSLIRNHVLH-AHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
+P C F+WTSLIR + H HF I +A+MH+ G+L SGFTFS VLNAC RVP+
Sbjct: 73 MPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNACGRVPAGF 132
Query: 121 E----------------------------------------------------AVICGYT 128
E A+ICGY
Sbjct: 133 EGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYA 192
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K G M DA+ LFD+M ERN +W+ MVAGYAN G+MKAA E YD M K+ VTWVAMIAG
Sbjct: 193 KAGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVTWVAMIAG 252
Query: 189 YGKCGEVREAKKVFDEISEP-DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
YGK G V EA+++FDEI+ P + S AA+ CY QNG+A+ AIEMY+ MR+ +++++VA
Sbjct: 253 YGKLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVA 312
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
MVGAISAC QL D+ M+ L +++EG C++T+ VSNALIHM SKCG +DLAWREF+ ++
Sbjct: 313 MVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMR 372
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
N+D+ +YS+MI AFA+HGKSQ+A+D+FLKM+ EG++PNQVTF+GVL ACS GL+E+GC+
Sbjct: 373 NRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLIEEGCR 432
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F++MT ++GI+PL EH TCMVDLLGR+GQLEKA+SLI + DA TWG+LL AC+V+
Sbjct: 433 FFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVY 492
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N ELGEIAARHL E+ P +GN LLAN YAS KW+ +E VK ++S+ KK G SW
Sbjct: 493 GNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWECAEEVKKLMSKKGMKKPSGYSW 552
Query: 488 I 488
I
Sbjct: 553 I 553
>gi|449446907|ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 456
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/452 (53%), Positives = 314/452 (69%), Gaps = 53/452 (11%)
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACARVP-------------------------SLLE--- 121
LYA+M + G+L S FTFSSVL+A AR+P SL++
Sbjct: 3 LYARMQKAGILESEFTFSSVLSASARMPALYLGRQVHARVIQLGFLSNKIVLTSLMDMYA 62
Query: 122 ------------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
++I GY+K+G+MDDAQ LFD M +RN SW+ MVAG
Sbjct: 63 KCGFILDAESLFFAIDDKDIVAWTSMIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAG 122
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
YAN GNMKAAK+ YD M EKN V+ +AMIAGYG+CG+V EA+++F EI PD+SC AAM
Sbjct: 123 YANWGNMKAAKQLYDAMPEKNPVSQLAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMV 182
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
CY QNGY K AIEMYK M+++N+ +EVA+VGA+SAC QLGDVEMA+ L VDEGCCD
Sbjct: 183 ACYSQNGYGKEAIEMYKQMKEKNLGTNEVALVGALSACVQLGDVEMASKLIDQVDEGCCD 242
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
RT +VSNALIH HSK G ++ A EF+R+K++DV++YS++I A ADHGK++EALD+F KM
Sbjct: 243 RTLFVSNALIHKHSKFGNIERAQEEFNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKM 302
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
EGI+PNQ+ FIGVL AC+H GL+E GCK FELM + FGI+P H CMVDLLGR+G+
Sbjct: 303 EEEGIKPNQICFIGVLNACAHAGLIEQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGE 362
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
+E A+++I ++ DA TWG+LLGACK+H N E+GEIAA+HL E+ PE TGN LLAN
Sbjct: 363 VEMAYNVIKGAREI-DAKTWGSLLGACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANT 421
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
YA M +W ++E V+ ++ E KK PG SW+S
Sbjct: 422 YAQMKEWNEAEKVRNVMVERGIKKFPGYSWVS 453
>gi|449516776|ref|XP_004165422.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 427
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/452 (50%), Positives = 293/452 (64%), Gaps = 82/452 (18%)
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACARVP-------------------------SLLE--- 121
LYA+M + G+L S FTFSSVL+A AR+P SL++
Sbjct: 3 LYARMQKAGILESEFTFSSVLSASARMPALYLGRQVHARVIQLGFLSNKIVLTSLMDMYA 62
Query: 122 ------------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
++I GY+K+G+MDDAQ LFD M +RN SW+ MVAG
Sbjct: 63 KCGFILDAESLFFAIDDKDIVAWTSMIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAG 122
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
YAN GNMKAAK+ YD M EKN V+ +AMIAGYG+CG+V EA+++F EI PD+SC AAM
Sbjct: 123 YANWGNMKAAKQLYDAMPEKNPVSQLAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAM- 181
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
VA+VGA+SAC QLGDVEMA+ L VDEGCCD
Sbjct: 182 ----------------------------VALVGALSACVQLGDVEMASKLIDQVDEGCCD 213
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
RT +VSNALIH HSK G ++ A EF+R+K++DV++YS++I A ADHGK++EALD+F KM
Sbjct: 214 RTLFVSNALIHKHSKFGNIERAQEEFNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKM 273
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
EGI+PNQ+ FIGVL AC+H GL+E GCK FELM + FGI+P H CMVDLLGR+G+
Sbjct: 274 EEEGIKPNQICFIGVLNACAHAGLIEQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGE 333
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
+E A+++I ++ DA TWG+LLGACK+H N E+GEIAA+HL E+ PE TGN LLAN
Sbjct: 334 VEMAYNVIKGAREI-DAKTWGSLLGACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANT 392
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
YA M +W ++E V+ ++ E KK PG SW+S
Sbjct: 393 YAQMKEWNEAEKVRNVMVERGIKKFPGYSWVS 424
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 193/530 (36%), Positives = 294/530 (55%), Gaps = 58/530 (10%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
T + L+QVH+ +++ H + +QFL L N SY VF+ + T LW
Sbjct: 37 TTSTLEQVHARIIRK--GLHQDHFIISQFLTLCNSL--SNFSYTTSVFNGVSSPST-VLW 91
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------AVI 124
+ I+ + + ++ L+ +M R + FT+ S++ AC++V + E AV
Sbjct: 92 NTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVR 151
Query: 125 CG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
CG Y K G + A+++FD M ERNV+SW+AM+AGYA+ ++ A++
Sbjct: 152 CGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKL 211
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS------------------------ 206
+D M EKN+V+W A+I+GY KCG++R A+K+FDE+
Sbjct: 212 FDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASAR 271
Query: 207 -------EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
E D W+A+ YVQNG A++++ M NV+ E MV +SAC+Q+G
Sbjct: 272 FVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMG 331
Query: 260 DVEMAAILAKHVDEGCCD-RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
+E+A + +V + D +V ALI M++KCG +D A + F + +D+ISY SM+
Sbjct: 332 SLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMM 391
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
+ HG +A+ +F +M NEG+ P+ V F +LTACS GLV++GC FE M + I
Sbjct: 392 QGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSI 451
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P +H CMVDLLGR+G+L++A+ L+ AG WGALLGACK+H + ELGE+ A
Sbjct: 452 VPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVAD 511
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L EL P+ GN LL+NIYA+ +W D +++ + E +K PGCSWI
Sbjct: 512 QLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 189/521 (36%), Positives = 294/521 (56%), Gaps = 43/521 (8%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ T + L+QVH+ +++ H + +QFL L N SY VF+ +
Sbjct: 31 LLKACTTTSTLEQVHARIIRK--GLHQDHFLISQFLTLCNSL--SNFSYTTSVFNGVSSP 86
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---- 121
T LW + I+ + + ++ L+ +M R + FT+ S++ AC++V + E
Sbjct: 87 ST-VLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAF 145
Query: 122 ---AVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
AV CG Y K G + A+++FD M ERNV+SW+AM+AGYA+ ++
Sbjct: 146 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDL 205
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
A++ +D M EKN+V+W A+I+GY KCG++R A+K+FDE+ + + M Y ++G
Sbjct: 206 VEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSG 265
Query: 225 ---YAKAAIE-------------MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
A+ E +++V + NV+ E MV +SAC+Q+G +E+A +
Sbjct: 266 DMASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVD 325
Query: 269 KHVDEGCCD-RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+V + D +V ALI M++KCG +D A + F + +D+ISY SM+ + HG
Sbjct: 326 DYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCG 385
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+A+ +F +M NEG+ P+ V F +LTACS GLV++GC FE M + I P +H C
Sbjct: 386 PQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYAC 445
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
MVDLLGR+G+L++A+ L+ AG WGALLGACK+H + ELGE+ A L EL P+
Sbjct: 446 MVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQN 505
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
GN LL+NIYA+ +W D +++ + E +K PGCSWI
Sbjct: 506 AGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/481 (37%), Positives = 274/481 (56%), Gaps = 20/481 (4%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFDQIPKCKTQF 69
NQ+KQVH+++ + K +Q + L+R L +P D Y R VF Q+ + F
Sbjct: 52 INQVKQVHAHIFR---KGLEQCCFVLAKLLRTLTKLDVPMD--PYPRLVFQQV-EYPNPF 105
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
LWT+LIR + L F +S+LLY M R G+ FTF+++L AC+ +
Sbjct: 106 LWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDV---------N 156
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
+G Q + ++ + ++ Y CG + +D M +++ ++W ++I Y
Sbjct: 157 LGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAY 216
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
K G + A ++FD + D W AM Y QN + A+E+++ M+ V+ EV +V
Sbjct: 217 AKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLV 276
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTN--YVSNALIHMHSKCGYLDLAWREFSRIK 307
G ISAC QLG + A + ++ T+ V +ALI M++KCG ++ A++ F R++
Sbjct: 277 GVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERME 336
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
++V SYSSMI FA HG + A+++F +M I+PN+VTFIGVLTACSH G+VE G +
Sbjct: 337 ERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQ 396
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F +M G+ P +H CMVDLLGR+G+LE+A +L+ G WGALLGAC++H
Sbjct: 397 LFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIH 456
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N ++ +IAA HL EL P GN LL+NIYAS G+W D V+ ++ KK+PGCSW
Sbjct: 457 GNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSW 516
Query: 488 I 488
+
Sbjct: 517 V 517
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 273/490 (55%), Gaps = 19/490 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ-LPGDNL-SYARQVFDQIP 63
++ R + NQ K+VH+ + K Q Y L+RL+ LP L SY R +F Q+
Sbjct: 14 ILERCSSLNQAKEVHA---QIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQL- 69
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV 123
F WT+LIR + L Q++ Y+ M + V FTFS++ +ACA V
Sbjct: 70 HTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVR------ 123
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
++ +G AQ L ++ +A++ Y CG+++ A+ +D M E++ ++W
Sbjct: 124 ---HSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWT 180
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+I Y + G++R A+ +FD + D W AM Y QN A+E+++ +R E V I
Sbjct: 181 GLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEI 240
Query: 244 SEVAMVGAISACTQLGDVEMAAIL---AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
EV +VG ISAC QLG + A + A+ G D V +ALI M+SKCG ++ A+
Sbjct: 241 DEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNV-LVGSALIDMYSKCGNVEEAY 299
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F ++ ++V SYSSMI FA HG+++ A+ +F M G++PN VTF+GVLTACSH G
Sbjct: 300 DVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAG 359
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LV+ G + F M + +G+ P E CM DLL R+G LEKA L+ D WGAL
Sbjct: 360 LVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGAL 419
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
LGA VH N ++ EIA++ L EL P+ GN LL+N YAS G+W D V+ ++ E K
Sbjct: 420 LGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLK 479
Query: 481 KSPGCSWISS 490
K+PG SW+ +
Sbjct: 480 KNPGWSWVEA 489
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/479 (38%), Positives = 269/479 (56%), Gaps = 16/479 (3%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL-QLPGDNLSYARQVFDQIPKCKTQFLW 71
F+Q+KQVH+++++ Q Y LIR+L ++ SY VF Q+ FLW
Sbjct: 55 FSQIKQVHAHIIRNGLS---QCSYVLTKLIRMLTKVDVPMGSYPLLVFGQV-NYPNPFLW 110
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
T++IR + L +S Y +M R GV FTFS++ AC ++ +G
Sbjct: 111 TAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNM---------DLG 161
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
AQ + ++ ++M+ Y CG + A++ +D M+E++ V+W +I Y K
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 221
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
G++ A +FD++ D W AM Y QNG K A+E ++ M+ + EV + G
Sbjct: 222 YGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGV 281
Query: 252 ISACTQLGDVEMAAILAKHVDE-GCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIKNK 309
ISAC QLG V+ A + + G N V +ALI M+SKCG D A++ F +K +
Sbjct: 282 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 341
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+V SYSSMI +A HG++ AL +F M I PN+VTFIG+L+ACSH GLVE G + F
Sbjct: 342 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 401
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M + FG+ P +H CMVDLLGR+G LE+A L+ + G WGALLGAC++H N
Sbjct: 402 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 461
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
++ +IAA L +L P GN LL+NIYAS G+W++ ++ +I E KK+PGCSW
Sbjct: 462 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 520
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/479 (38%), Positives = 269/479 (56%), Gaps = 16/479 (3%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL-QLPGDNLSYARQVFDQIPKCKTQFLW 71
F+Q+KQVH+++++ Q Y LIR+L ++ SY VF Q+ FLW
Sbjct: 55 FSQIKQVHAHIIRNGLS---QCSYVLTKLIRMLTKVDVPMGSYPLLVFGQV-NYPNPFLW 110
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
T++IR + L +S Y +M R GV FTFS++ AC ++ +G
Sbjct: 111 TAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNM---------DLG 161
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
AQ + ++ ++M+ Y CG + A++ +D M+E++ V+W +I Y K
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 221
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
G++ A +FD++ D W AM Y QNG K A+E ++ M+ + EV + G
Sbjct: 222 YGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGV 281
Query: 252 ISACTQLGDVEMAAILAKHVDE-GCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIKNK 309
ISAC QLG V+ A + + G N V +ALI M+SKCG D A++ F +K +
Sbjct: 282 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 341
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+V SYSSMI +A HG++ AL +F M I PN+VTFIG+L+ACSH GLVE G + F
Sbjct: 342 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 401
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M + FG+ P +H CMVDLLGR+G LE+A L+ + G WGALLGAC++H N
Sbjct: 402 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 461
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
++ +IAA L +L P GN LL+NIYAS G+W++ ++ +I E KK+PGCSW
Sbjct: 462 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 520
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 284/507 (56%), Gaps = 49/507 (9%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ T + L+QVH+ +++ H + +QFL L N SY VF+ +
Sbjct: 79 LLKACTTTSTLEQVHARIIRK--GLHQDHFIISQFLTLCNSL--SNFSYTTSVFNGVSSP 134
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---- 121
T LW + I+ + + ++ L+ +M R + FT+ S++ AC++V + E
Sbjct: 135 ST-VLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAF 193
Query: 122 ---AVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
AV CG Y K G + A+++FD M ERNV+SW+AM+AGYA+ ++
Sbjct: 194 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDL 253
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--EPDASCWAAMTVCYVQ 222
A++ +D M EKN+V+W A+I+GY KCG++R A+K+FDE+ D W+A+
Sbjct: 254 VEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALI----- 308
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD-RTNY 281
NV+ E MV +SAC+Q+G +E+A + +V + D +
Sbjct: 309 ---------------SGNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAH 353
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V ALI M++KCG +D A + F + +D+ISY SM+ + HG +A+ +F +M NEG
Sbjct: 354 VIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEG 413
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
+ P+ V F +LTACS GLV++GC FE M + I P +H CMVDLLGR+G+L++A
Sbjct: 414 LTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEA 473
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
+ L+ AG WGALLGACK+H + ELGE+ A L EL P+ GN LL+NIYA+
Sbjct: 474 YELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAA 533
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
+W D +++ + E +K PGCSWI
Sbjct: 534 EQWLDVSLLRNKMRERGIRKIPGCSWI 560
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/483 (37%), Positives = 270/483 (55%), Gaps = 22/483 (4%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ---LPGDNLSYARQVFDQIPKCKTQ 68
NQ+KQ+H ++L+ K DQ Y LIR L +P D Y R+V + + + +
Sbjct: 62 NLNQIKQIHGHVLR---KGLDQSCYILTKLIRTLTKLGVPMD--PYPRRVIEPV-QFRNP 115
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
FLWT++IR + + F ++I +Y M + + FTFS++L AC + L
Sbjct: 116 FLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDL--------- 166
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
+G AQ F V + M+ Y CG++ A++ +D M E++ ++W +IA
Sbjct: 167 NLGRQFHAQT-FRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAA 225
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y + G + A +F+ + D W AM + QN + A+E + M + +R EV +
Sbjct: 226 YARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 285
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV--SNALIHMHSKCGYLDLAWREFSRI 306
G ISAC QLG + A + + +++V +ALI M+SKCG ++ A F +
Sbjct: 286 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSM 345
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHGGLVEDG 365
NK+V SYSSMI A HG++QEALD+F M + I+PN VTF+G LTACSH GLV+ G
Sbjct: 346 NNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQG 405
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F M + FG++P +H TCMVDLLGR+G+L++A LI G WGALLGAC+
Sbjct: 406 RQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACR 465
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H N ++ EIAA HL EL P+ GN LL+N+Y+S G W V+ +I E KK+P
Sbjct: 466 IHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAV 525
Query: 486 SWI 488
SW+
Sbjct: 526 SWV 528
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/507 (35%), Positives = 288/507 (56%), Gaps = 28/507 (5%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
+++ KT LK +H+ LL + ++ L+RL G YA +VFD+I +
Sbjct: 7 HIIHNCKTLKSLKSIHARLLIESSVASSEF--VINKLLRLYSRFGAT-DYAHKVFDEITQ 63
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----- 119
+LWTSLI +V + + ++ L+ +M R + FT SSVL A AR+
Sbjct: 64 -PNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQA 122
Query: 120 ----------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
+I GY +D A++ FD M ERNV+SW++M+ GY G+
Sbjct: 123 VYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGD 182
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE-VREAKKVFDEISEPDASCWAAMTVCYVQ 222
M A+ +D M K+ +W M++GY G+ A+ +FD++ + W+ M Y +
Sbjct: 183 MAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYAR 242
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNY 281
NG A+E+++ ++++++ E ++G ISAC+QLG ++ A +I+ +V
Sbjct: 243 NGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLR- 301
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V +LI M++KCG ++ A + F KD++ YS+MI A A+HG ++A+ +F KM+
Sbjct: 302 VFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRAN 361
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
I+P+ VTF+GVLTAC+HGGLV++G K F+ MT FGI+P +H C+VDLLGR G LE+A
Sbjct: 362 IKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEA 421
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
++LI + + WGALL AC+VH N +L E+AA L ++ P+ +GN LL+NIYA+
Sbjct: 422 YNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAA 481
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
G+W V+ I E +K+ G SWI
Sbjct: 482 GRWGSVAKVRAKIREHRVRKNRGSSWI 508
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 285/536 (53%), Gaps = 58/536 (10%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ KT L QVH++L++ K +Q + I ++SY+ VFD++
Sbjct: 35 LLKLCKTHIDLHQVHAHLIQ---KGLEQDSFLVTQFISASNSVA-HISYSTSVFDRVLSP 90
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI- 124
T FLW SL+ + F I LY +M R +TF S+L CA ++E +
Sbjct: 91 ST-FLWNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMAL 149
Query: 125 ------CG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
CG Y K GL+D A+++FD M+ERNV+SW+AM+ GY++ GN+
Sbjct: 150 HGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNL 209
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP---------------- 208
AK +D M E+N +W A+I GY K G+V+ A+K FDE+ E
Sbjct: 210 VEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMPEKNVVSFTTMIDGYAKAG 269
Query: 209 ---------------DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
D W+A+ Y QNG A++ + M NV+ + + +
Sbjct: 270 DMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSSRNVKPDKFVLTSLML 329
Query: 254 ACTQLGDVEMAAILAKHVDEGCCD-RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
AC+QLG++++A + + D R +V+ ALI M++KCG ++ A F ++ +D+I
Sbjct: 330 ACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLFEKMPKRDLI 389
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
SY S++ + HG +A+ +F +M E + P+ V F +LTACS GLV++G FE+M
Sbjct: 390 SYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAGLVDEGWHYFEMM 449
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+ + P +H C+VDLL RSG+L++A+ LI AG WGALLGACK++ ++EL
Sbjct: 450 RCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGACKLYCDSEL 509
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+ A L+E+ PE GN LL+NIYA+ +W D V+ ++E +K PGCSWI
Sbjct: 510 AEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI 565
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/483 (37%), Positives = 270/483 (55%), Gaps = 22/483 (4%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ---LPGDNLSYARQVFDQIPKCKTQ 68
NQ+KQ+H ++L+ K DQ Y LIR L +P D YAR+V + + + +
Sbjct: 61 NLNQIKQIHGHVLR---KGLDQSCYILTKLIRTLTKLGVPMD--PYARRVIEPV-QFRNP 114
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
FLWT++IR + + F ++I +Y M + + FTFS++L AC + L
Sbjct: 115 FLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL--------- 165
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
+G AQ F V + M+ Y C ++ A++ +D M E++ ++W +IA
Sbjct: 166 NLGRQFHAQT-FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAA 224
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y + G + A ++F+ + D W AM + QN + A+E + M + +R EV +
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV--SNALIHMHSKCGYLDLAWREFSRI 306
G ISAC QLG + A + + +++V +ALI M+SKCG ++ A F +
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDG 365
NK+V +YSSMI A HG++QEAL +F M + I+PN VTF+G L ACSH GLV+ G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F+ M + FG++P +H TCMVDLLGR+G+L++A LI G WGALLGAC+
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACR 464
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H N E+ EIAA HL EL P+ GN LL+N+YAS G W V+ +I E KK+P
Sbjct: 465 IHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAV 524
Query: 486 SWI 488
SW+
Sbjct: 525 SWV 527
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/488 (37%), Positives = 272/488 (55%), Gaps = 26/488 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFDQIPKCKT 67
K Q+KQVH+ + L DQ Y LIR L +P D Y +F+Q+
Sbjct: 57 KNLTQIKQVHA---RILLNGLDQSCYVLAKLIRTLTKLNIPVD--PYPLSIFNQV-NYPN 110
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC-ARVPSLLEAVICG 126
FL+ +LIR +++ ++S Y+ M + GV+ FTF+++ AC A++ L I G
Sbjct: 111 PFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHG 170
Query: 127 YTKI--GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
T + G +D ++M+ Y CG ++ ++ +D M ++ ++W
Sbjct: 171 QTILVGGFGEDLH------------VGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTE 218
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ Y K G + A ++FD + D W M + QN + AI ++ M++ V
Sbjct: 219 LISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETD 278
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVD--EGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
E+ ++G ISAC QLG + A + + E + V +ALI M+SKCG + A+R
Sbjct: 279 EITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRV 338
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F +K ++V SYSSMI FA HG+ +A+ +F +M I+PN+VTFIGVLTACSH G+V
Sbjct: 339 FQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMV 398
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E G + FELM + +GIKP +H TCMVDLLGR+G+L++AH L+ G WGALLG
Sbjct: 399 EQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLG 458
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H + ++ IAA HL EL P GN LLANIYAS G+W D V+ ++ +K+
Sbjct: 459 ACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKN 518
Query: 483 PGCSWISS 490
P SWI S
Sbjct: 519 PAFSWIES 526
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 267/454 (58%), Gaps = 22/454 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR++FDQ+P + W ++I +V + H ++I L+ +M + ++++V+N
Sbjct: 249 IAEARRLFDQMP-IRNVVAWNAMIAAYVQNCHVDEAISLFMEMPE----KNSISWTTVIN 303
Query: 112 ACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
R+ L EA +I GY + MDDA+++F+ ++ R+V+ W+ M
Sbjct: 304 GYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTM 363
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+AGY+ CG M A + +M +K+ V+W M+A Y + G++ A K+F+E+ E + W
Sbjct: 364 IAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWN 423
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
++ QNG A++ + +M E + + +S+C L +++ L + V +
Sbjct: 424 SLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKS 483
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
+VSNALI M++KCG + A F I + DV+S++S+I A+A +G +EAL +F
Sbjct: 484 GYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLF 543
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
KM EG+ P++VTF+G+L+ACSH GL++ G K F+ M + + I+PL EH CMVDLLGR
Sbjct: 544 HKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGR 603
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+G+LE+A L+ K +AG WGALLGAC++H N EL + AA LLE P KT N LL
Sbjct: 604 AGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLL 663
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+N+ A G+W + V+ ++ E +K PG SWI
Sbjct: 664 SNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWI 697
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 210/456 (46%), Gaps = 79/456 (17%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFLWTSLI----RNHVLHAHFRQSILLYAKMHRL--GVL 100
L D + ARQ+FD++P + + WT +I RN L LL K + + +
Sbjct: 88 LHNDRVEEARQLFDKMP-TRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAM 146
Query: 101 TSGFTFSSVLNACARVPSLLEA--------VICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+G+ + + R+ + A ++ GYT+ G M + F+ MAER+V+SW+
Sbjct: 147 VAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWN 206
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
MV G+ G++ ++ EF++++ N+V+WV M+ G+ + G++ EA+++FD++ +
Sbjct: 207 LMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVA 266
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-------- 264
W AM YVQN + AI ++ M ++N ++ I+ ++G ++ A
Sbjct: 267 WNAMIAAYVQNCHVDEAISLFMEMPEKN----SISWTTVINGYVRMGKLDEARQLLNQMP 322
Query: 265 --------AILAKHVDEGCCDRT----NYVS-------NALIHMHSKCGYLD-------- 297
A+++ +V D N +S N +I +S+CG +D
Sbjct: 323 YRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQ 382
Query: 298 ------LAW-----------------REFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
++W + F +K K+++S++S+I+ +G +AL F
Sbjct: 383 MVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSF 442
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
+ M +EG +P+Q TF L++C+H ++ G KQ + G ++ + +
Sbjct: 443 MLMGHEGQKPDQSTFACGLSSCAHLAALQVG-KQLHQLVMKSGYATDLFVSNALITMYAK 501
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
G + A L D F D +W +L+ A ++ N
Sbjct: 502 CGSISSAELLFKDIDHF-DVVSWNSLIAAYALNGNG 536
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 124/249 (49%), Gaps = 11/249 (4%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I K G +D+A ++F M +N ++ ++M++ +A G + A++ +D M ++N V+W
Sbjct: 22 ITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWN 81
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+MIA Y V EA+++FD++ D W M CY +NG A ++ ++ + +
Sbjct: 82 SMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPV 141
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
AMV + Q + A+ + + + N+++ +++ G + L + F
Sbjct: 142 CCNAMVAGYAKNRQFDE-------ARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFF 194
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ +DV+S++ M+ F + G + + F K+ N PN V+++ +L + G +
Sbjct: 195 EEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPN----PNTVSWVTMLCGFARFGKIA 250
Query: 364 DGCKQFELM 372
+ + F+ M
Sbjct: 251 EARRLFDQM 259
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 143/292 (48%), Gaps = 20/292 (6%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I + K G + DA++LFD M +RN++SW++M+A Y + ++ A++ +D+M ++ +
Sbjct: 51 SMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYS 110
Query: 182 WVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W MI Y + GE+ +A+ +F+ + + + C AM Y +N A ++ M ++
Sbjct: 111 WTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKD 170
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+ V+ ++ T+ G++ L E +R N ++ + G L+ +W
Sbjct: 171 L----VSWNSMLTGYTRNGEMR----LGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSW 222
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +I N + +S+ +M+ FA GK EA +F +M N V + ++ A
Sbjct: 223 EFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIR----NVVAWNAMIAAYVQNC 278
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKD 410
V++ F M I T +++ R G+L++A L+ M Y++
Sbjct: 279 HVDEAISLFMEMPEKNSIS-----WTTVINGYVRMGKLDEARQLLNQMPYRN 325
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
N I K G +D A + F + +K+ ++++SMI+AFA +G+ +A +F M I
Sbjct: 19 NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI- 77
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELM-TRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
V++ ++ A H VE+ + F+ M TR + T +TC R+G+L KA
Sbjct: 78 ---VSWNSMIAAYLHNDRVEEARQLFDKMPTR--DLYSWTLMITCYT----RNGELAKAR 128
Query: 403 SL--IMDYK 409
+L ++ YK
Sbjct: 129 NLFNLLPYK 137
>gi|224071603|ref|XP_002303536.1| predicted protein [Populus trichocarpa]
gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa]
Length = 596
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 269/457 (58%), Gaps = 23/457 (5%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
Y L+ L GD ++ A++VFD++ + K W S++ H+ + ++ ++ ++
Sbjct: 160 YVQTALVDLYSKLGD-MNTAQKVFDELAE-KNVVSWNSILSGHLKSGNLLEAQRVFDQIS 217
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
+ V++ ++I GY KIG MD A LF M E+N SW+A++
Sbjct: 218 KKDVIS------------------WNSMISGYAKIGDMDRACVLFQQMPEKNYSSWNALI 259
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
+GY NCG++K+A F+D M E+NSV+W+ MIAGY KCG+V A K+FD+I++ D + A
Sbjct: 260 SGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSKCGDVDSASKLFDQIAKKDLLTFNA 319
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQ--ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
M C+ QN + A+ ++ M + N++ ++ + +SAC+QLGD+ A+ + +V++
Sbjct: 320 MISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVSACSQLGDLRFASWIESYVND 379
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+ + + AL+ +++KCG +D A+ F + KDV++YS+MI+ +GK +A+ +
Sbjct: 380 LGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKKDVVAYSAMISGCGINGKVADAIKL 439
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F M + I PN TF G+LTAC+H GLV++G + F M + G+ P T+H MVDLLG
Sbjct: 440 FDMMVDAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSM-KDHGLVPSTDHYAIMVDLLG 498
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R+G+L+ A+ LI +G WGALL AC VH N ELGEIAA+H L T +L
Sbjct: 499 RAGRLQDAYELIKSMPMQPHSGVWGALLLACNVHNNVELGEIAAQHCFNLETNATAYYSL 558
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
LANIY+S G+W D ++ + E + K GCSW S
Sbjct: 559 LANIYSSAGRWDDVGRLRKLWKEKKLAKLSGCSWTES 595
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 264/439 (60%), Gaps = 19/439 (4%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ L AR +FD++P+ + + W ++I + + ++ L+ + V FT++
Sbjct: 218 NRLVDARGIFDRMPE-RDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWT-- 270
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
A++ GY + G++D+A+R+FD M E+N +SW+A++AGY C M A+E
Sbjct: 271 ------------AMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARE 318
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++ M +N +W MI GY + G++ +A+ FD + + D+ WAA+ Y Q+GY + A
Sbjct: 319 LFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEA 378
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ ++ M+++ R++ +S C ++ +E+ + V + + YV NAL+ M
Sbjct: 379 LHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVM 438
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG +D A+ F I+ K+V+S+++MI +A HG +EAL +F M+ GI P+ VT
Sbjct: 439 YCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTM 498
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL+ACSH GLV+ G + F MT+ +GI ++H TCM+DLLGR+G+L+ A +L+ +
Sbjct: 499 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 558
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
DA TWGALLGA ++H N ELGE AA+ + E+ P+ +G LL+N+YA+ G+W D
Sbjct: 559 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGR 618
Query: 470 VKMMISETEKKKSPGCSWI 488
+++ + + KK PG SW+
Sbjct: 619 MRLRMRDRGVKKVPGYSWV 637
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 167/332 (50%), Gaps = 22/332 (6%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT----- 101
L D ARQ+F+++P + W +I V + + R + LL+ +M V++
Sbjct: 91 LSNDKFYLARQLFEKMP-TRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAML 149
Query: 102 SGFTFSSVLNACARVPSLL--------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
SG+ + + + + ++ Y + G ++DA+RLF+S A+ +ISW+
Sbjct: 150 SGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNC 209
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
M+ GY + A+ +DRM E++ V+W MI+GY + GE+ EA+++F+E D W
Sbjct: 210 MMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTW 269
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
AM YVQNG A ++ M ++N +S A++ C ++ A+ + E
Sbjct: 270 TAMVSGYVQNGMLDEARRVFDGMPEKN-SVSWNAIIAGYVQCKRMDQ-------ARELFE 321
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+ N +I +++ G + A F R+ +D IS++++I +A G +EAL +
Sbjct: 322 AMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHL 381
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
F++M+ +G N+ TF L+ C+ +E G
Sbjct: 382 FVEMKRDGERLNRSTFTSTLSTCAEIAALELG 413
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 128/249 (51%), Gaps = 12/249 (4%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I + + G D A RLF+SM R+ ISW+AM++G + A++ +++M ++ V+W
Sbjct: 56 ITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWN 115
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
MI+G + +R A+ +FD++ E D W AM Y QNGY K A E++ M +N
Sbjct: 116 VMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKN--- 172
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
++ G ++A Q G +E A+ + E D N ++ + K L A F
Sbjct: 173 -SISWNGMLAAYVQNGRIED----ARRLFESKADWELISWNCMMGGYVKRNRLVDARGIF 227
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
R+ +D +S+++MI+ +A +G+ EA +F E + T+ +++ G+++
Sbjct: 228 DRMPERDEVSWNTMISGYAQNGELLEAQRLF----EESPVRDVFTWTAMVSGYVQNGMLD 283
Query: 364 DGCKQFELM 372
+ + F+ M
Sbjct: 284 EARRVFDGM 292
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 30/278 (10%)
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
T+ + V W I + + G+ A ++F+ + + W AM + N A ++++
Sbjct: 45 TDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFE 104
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M ++ V+ IS C + ++ A +L + E R NA++ +++ G
Sbjct: 105 KMPTRDL----VSWNVMISGCVRYRNLRAARLLFDQMPE----RDVVSWNAMLSGYAQNG 156
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
Y+ A F + K+ IS++ M+ A+ +G+ ++A +F ++ + +
Sbjct: 157 YVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF---------ESKADWELISW 207
Query: 355 ACSHGGLVEDGCKQFELMTR--VFGIKPLTEHLT--CMVDLLGRSGQLEKAHSLIMDYKD 410
C GG V K+ L+ +F P + ++ M+ ++G+L +A L +
Sbjct: 208 NCMMGGYV----KRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF-EESP 262
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKT 448
D TW A++ N L E AR + + PEK
Sbjct: 263 VRDVFTWTAMVSG--YVQNGMLDE--ARRVFDGMPEKN 296
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 293/579 (50%), Gaps = 103/579 (17%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL----PGDNLSYARQVFDQ 61
L+ K+F LKQ+HS ++KT H L +L++ P NLSYA +F+
Sbjct: 38 LLSTCKSFQNLKQIHSQIIKT------GLHNTQFALSKLIEFCAISPFGNLSYALLLFES 91
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
I + QF+W ++IR + L + +I Y +M GV + +TF +L +CA+V + E
Sbjct: 92 IEQ-PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQE 150
Query: 122 ----------------------------------------------------AVICGYTK 129
A+I GYT
Sbjct: 151 GKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTL 210
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV--------- 180
G +DDA+RLF+ + R+ +SW+AM+AGYA G + A F+ M N
Sbjct: 211 RGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTV 270
Query: 181 -----------------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDA 210
+W+ A+I Y KCG++ +A+ +F+ I E D
Sbjct: 271 LSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDI 330
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W M Y K A+ +++ M+Q NV ++V V + AC LG +++ + +
Sbjct: 331 ISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAY 390
Query: 271 VDEGCCDRTNY-VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
+D+ TN + +LI M++KCG ++ A + F+ +K K + S+++MI+ A HG +
Sbjct: 391 IDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANM 450
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL++F +MR+EG EP+ +TF+GVL+ACSH GLVE G + F M + I P +H CM+
Sbjct: 451 ALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMI 510
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLGR+G ++A +L+ + + D WG+LLGAC+VH N ELGE AA+HL EL PE G
Sbjct: 511 DLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPG 570
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYA+ G+W D ++ +++ KK PGCS I
Sbjct: 571 AYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSI 609
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 281/501 (56%), Gaps = 26/501 (5%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPKCKTQ 68
S + + LKQVH+ L+T H Q HY + L++ P NL++A +VF+ +P
Sbjct: 40 STSLHHLKQVHAVALRT---GHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNV- 95
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV----- 123
F++ +I+ + + ++I Y KM + FT+ ++ AC + E V
Sbjct: 96 FVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAH 155
Query: 124 ----------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
I Y G ++ A+R+ +VI ++AM+ GY CG ++AA
Sbjct: 156 VIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAA 215
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
KE + M +KN +W M++G KCG + EA+++F+E+ E + W+AM Y++ GY K
Sbjct: 216 KELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYK 275
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A+E++ VM++E +R + + ++AC LG ++ + +V+ + AL+
Sbjct: 276 EALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALV 335
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M++KCG LD+AW F +++ K+V ++++MI HG++++A+++F KM+ + PN +
Sbjct: 336 DMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGI 395
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
T +GVL+AC+H G+V++G + F M V+GI+P EH C+VDLLGR+G L +A ++
Sbjct: 396 TLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYS 455
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
A WGALLGAC+ H + ELGE + LLEL P+ +G ALL+NIYA G+W D
Sbjct: 456 MPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDV 515
Query: 468 EIVKMMISETEKKKSPGCSWI 488
V+ ++ E K S G S I
Sbjct: 516 ANVRKLMKERGVKTSTGISMI 536
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/439 (35%), Positives = 264/439 (60%), Gaps = 19/439 (4%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ L AR +FD++P+ + + W ++I + + ++ L+ + + FT++
Sbjct: 137 NRLVDARGIFDRMPE-RDEVSWNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWT-- 189
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
A++ GY + G++D+A+R+FD M E+N +SW+A++AGY C M A+E
Sbjct: 190 ------------AMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARE 237
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++ M +N +W MI GY + G++ +A+ FD + + D+ WAA+ Y Q+GY + A
Sbjct: 238 LFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEA 297
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ ++ M+++ R++ +S C ++ +E+ + V + + YV NAL+ M
Sbjct: 298 LHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVM 357
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG +D A+ F I+ K+V+S+++MI +A HG +EAL +F M+ GI P+ VT
Sbjct: 358 YCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTM 417
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL+ACSH GLV+ G + F MT+ +GI ++H TCM+DLLGR+G+L+ A +L+ +
Sbjct: 418 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 477
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
DA TWGALLGA ++H N ELGE AA+ + E+ P+ +G LL+N+YA+ G+W D
Sbjct: 478 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGR 537
Query: 470 VKMMISETEKKKSPGCSWI 488
+++ + + KK PG SW+
Sbjct: 538 MRLRMRDRGVKKVPGYSWV 556
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 172/353 (48%), Gaps = 32/353 (9%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQF-LIRLLQLPG----DNLSYARQVFDQIPKCKTQFLWT 72
Q H+ L P Q H +F + L G NL AR +FDQ+P+ + W
Sbjct: 7 QPHAKRTMRLRSPPLQLHASPEFDFLERHDLRGCVRYRNLRAARLLFDQMPE-RDVVSWN 65
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGL 132
+++ + + + +++ ++ +M C S ++ Y + G
Sbjct: 66 AMLSGYAQNGYVKEAKEIFDEM-----------------PCKNSISW-NGMLAAYVQNGR 107
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
++DA+RLF+S A+ +ISW+ M+ GY + A+ +DRM E++ V+W MI+GY +
Sbjct: 108 IEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQN 167
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
GE+ EA+++F+E D W AM YVQNG A ++ M ++N +S A++
Sbjct: 168 GELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN-SVSWNAIIAGY 226
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
C ++ A+ + E + N +I +++ G + A F R+ +D I
Sbjct: 227 VQCKRMDQ-------ARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSI 279
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
S++++I +A G +EAL +F++M+ +G N+ TF L+ C+ +E G
Sbjct: 280 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG 332
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F ++ +DV+S+++M++ +A +G +EA ++F +M + N +++ G+L A G +
Sbjct: 53 FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRI 108
Query: 363 EDGCKQFE 370
ED + FE
Sbjct: 109 EDARRLFE 116
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 270/466 (57%), Gaps = 25/466 (5%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
+I L G+ + ARQ+FD++ + + W S+I + + + L+ +M V+
Sbjct: 143 MIELFMRCGE-MGSARQMFDEMEE-RDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVI 200
Query: 101 TSGFTFSSVLNACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSM 143
+ ++S++ + LLEA ++ Y +G + A+ LF+ M
Sbjct: 201 S----WTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELM 256
Query: 144 AERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFD 203
+V +W+ M++G G M AAKEF+DRM E+N +WV +I GY K G+V A+ VFD
Sbjct: 257 PIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFD 316
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
++ E + W+ M Y + G+ +++++YK +++ ++ E +G ISAC+QLG +
Sbjct: 317 QMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDT 376
Query: 264 A-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
A +++ V V+ +LI M++KCG ++ A + F + KD+ YS++ITAFA
Sbjct: 377 AESVICDFVGPSLFPNLQVVT-SLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFA 435
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
+HG S++A+ +F +M+ I+P+ V F+GVLTAC+HGGLV +G + F M +GI+P
Sbjct: 436 NHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSE 495
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
+H CMVD+LGR+G LE+AHSLI +A WGALL AC+VH+N +L E AA L +
Sbjct: 496 KHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQ 555
Query: 443 LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ P +GN LL NIYA G+W D V+ MI E +K+ G SWI
Sbjct: 556 IEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWI 601
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 209/438 (47%), Gaps = 54/438 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + ++ L +H++LL ++ L+RL G +SYA ++FD+ P+
Sbjct: 9 LLKQCRSLKTLTTIHAHLL--ISGSIASSDLTLNKLLRLYSKFG-AVSYAHKLFDETPE- 64
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---- 121
FLWT+LI + + + + KMHR ++ FT +SVL A +R+ + +
Sbjct: 65 PNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLV 124
Query: 122 ---AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
AV CGY E +++ + M+ + CG M +A++ +D M E++
Sbjct: 125 YGLAVRCGY-----------------EFDLVVKNVMIELFMRCGEMGSARQMFDEMEERD 167
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
+V+W +MI GYG G V A+K+FD + E + W +M YV+ G A +++ M +
Sbjct: 168 AVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPE 227
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKH-------VDEGCC------------DRT 279
+++ +V + +S + + ++ H + GCC DR
Sbjct: 228 KDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRM 287
Query: 280 NYVSNA----LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
+ A +I + K G +D A F ++ K+++++S+MI +A G +L ++
Sbjct: 288 QERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYK 347
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRS 395
+ +GI+P++ +G+++ACS G V D + + P + +T ++D+ +
Sbjct: 348 TFKEQGIKPDETFALGIISACSQLG-VPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKC 406
Query: 396 GQLEKAHSL--IMDYKDF 411
G +E+A + ++D KD
Sbjct: 407 GNIERAVQVFEMVDQKDL 424
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/496 (34%), Positives = 265/496 (53%), Gaps = 61/496 (12%)
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA 112
+Y R +F QI K FLW ++IR V + F +I Y M G L + FTF VL A
Sbjct: 63 NYTRFLFHQI-KQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKA 121
Query: 113 CARVPSLLEAV---------------------ICGYTKIGLMDDAQRLFDSMAERNVISW 151
CAR+ L V +C Y K G ++DA ++FD + ++NV+SW
Sbjct: 122 CARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSW 181
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKN----------------------SVTWV------ 183
+A+++GY G + A + + R+ E N S W+
Sbjct: 182 TAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIME 241
Query: 184 -----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+++ Y KCG + +A+ VFD + E D W AM Y NG K AI++
Sbjct: 242 MGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDL 301
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M++ENV+ +VG +SAC +LG +E+ ++ VD + ALI +++K
Sbjct: 302 FLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAK 361
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG + AW F +K KD + ++++I+ A +G + + +F ++ GI+P+ TFIG+
Sbjct: 362 CGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGL 421
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L C+H GLV++G + F M R F + P EH CMVDLLGR+G L++AH LI +
Sbjct: 422 LCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEA 481
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
+A WGALLGAC++H + +L E+A + L+EL P +GN LL+NIY++ KW ++ V++
Sbjct: 482 NAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRL 541
Query: 473 MISETEKKKSPGCSWI 488
++E +K PGCSWI
Sbjct: 542 SMNEKRIQKPPGCSWI 557
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++S A +VF + K K + +W ++I ++ + + S L+ ++ +LG+ G TF +L
Sbjct: 364 SMSRAWEVFKGM-KEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL 422
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE-----RNVISWSAMVAGYANCGNMK 165
CG T GL+D+ +R F+SM ++ + MV G +
Sbjct: 423 --------------CGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLD 468
Query: 166 AAKEFYDRMT-EKNSVTWVAMIA 187
A + M E N++ W A++
Sbjct: 469 EAHQLIRNMPMEANAIVWGALLG 491
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 274/496 (55%), Gaps = 29/496 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ R N LKQ+ ++L+ T H Q H+YA L+R L NLSYAR +FD + +
Sbjct: 61 LLERCIHLNHLKQLQAFLI---TLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDHV-ES 116
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARV--PSLLEA 122
+L+T++I + H+ ++LLY M R + F + VL +C +V P
Sbjct: 117 PNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARM 176
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC-GNMKAAKEFYDRMTEKNSVT 181
V C + G E+ + +A++ Y ++++A+ +D MTE+N V+
Sbjct: 177 VHCQVLRSGF------------EQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVS 224
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ--- 238
W AMI+GY + G++ A +F+E+ E D W A+ Y QNG A+ +++ M
Sbjct: 225 WTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEA 284
Query: 239 ----ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
+ R ++V V ++SAC G + + + +V ++VSNAL+ M+ KCG
Sbjct: 285 GAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCG 344
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN--EGIEPNQVTFIGV 352
L A R F R + + S++SMI A HG+SQ A+ +F +M G++P++VTFIG+
Sbjct: 345 CLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGL 404
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L AC+HGGLVE G FELMT+ +GI+P EH C+VDLLGR+GQ E+A ++ +
Sbjct: 405 LNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEP 464
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
D WG+LL CK+H + +L E + + L+++ P G +LANIY +GKW + V+
Sbjct: 465 DEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRK 524
Query: 473 MISETEKKKSPGCSWI 488
++ E K+PGCSWI
Sbjct: 525 VLKEQNAHKTPGCSWI 540
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 282/506 (55%), Gaps = 26/506 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN-LSYARQVFDQIPK 64
L+ + NQ+ Q+H+ ++KT ++ A+ L RL N L YAR VFD+IP
Sbjct: 9 LLQNATKLNQIIQIHALIIKTSLDGNN--FVLAKLLRRLFACSSANDLLYARSVFDEIPS 66
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPS----- 118
T F+W ++IR ++ + ++S+ L+ +M H+ + ++ S V+ AC R+
Sbjct: 67 PDT-FIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125
Query: 119 ----------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
+ A+I Y K G ++ A+ + D MA +++ ++ ++A Y G
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVG 185
Query: 163 NMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
+ A + +DRM E++ V+W MI G+ G+V AKK+FD E D W++M Y +
Sbjct: 186 EINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAK 245
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
+ A+ ++ M+ NV +V MV +SAC +G + M ++ + ++ + +
Sbjct: 246 ARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKL 305
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
+L+ M++KCG +D + R F+ + N+DV ++S+MI A+HG + ALD F KM +E I
Sbjct: 306 GTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDI 365
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
+PN VTFIGVL+ACSH GLV++G F M++V+ + P EH C+VD+LGR+G+L++A
Sbjct: 366 KPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAM 425
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
LI DA W ALLGAC+++ N E+ E A +LLEL P GN LL+NIY+
Sbjct: 426 ELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAK 485
Query: 463 KWKDSEIVKMMISETEKKKSPGCSWI 488
+W V+ M+ +K PG S I
Sbjct: 486 EWDKVVNVRRMMKNINIQKVPGSSSI 511
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 269/478 (56%), Gaps = 45/478 (9%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-----LTSGF----- 104
AR+VFD++P+ K W +L+ +V ++ ++ +L+ + L GF
Sbjct: 171 ARRVFDRMPE-KNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKK 229
Query: 105 -----------------TFSSVLNACARVPSLLEA-----------------VICGYTKI 130
++++++ A+ + EA ++ GY +
Sbjct: 230 IVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQN 289
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
++++A+ LFD M ERN +SW+AM+AGY ++ AKE +D M +N TW MI GY
Sbjct: 290 RMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYA 349
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+CG++ EAK +FD++ + D WAAM Y Q+G++ A+ ++ +M +E R++ +
Sbjct: 350 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSS 409
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
A+S C + +E+ L + +G + +V NAL+ M+ KCG ++ A F + KD
Sbjct: 410 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 469
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
++S+++MI ++ HG +EAL F M+ EG++P+ T + VL+ACSH GLV+ G + F
Sbjct: 470 IVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFH 529
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
MT+ +G++P ++H CMVDLLGR+G LE+AH+L+ + DA WG LLGA +VH N
Sbjct: 530 TMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 589
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL E AA + + PE +G LL+N+YAS G+W D +++ + + KK PG SWI
Sbjct: 590 ELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 647
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 154/323 (47%), Gaps = 26/323 (8%)
Query: 107 SSVLNACARVPSL----LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
S L R+P A+I GY + G + A+ LFD M ER+++SW+ M+ GY
Sbjct: 76 SEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNR 135
Query: 163 NMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
N+ A+E ++RM E++ +W +++GY + G V +A++VFD + E + W A+ YVQ
Sbjct: 136 NLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQ 195
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
N + A ++ R+ +S ++G ++ + A+ + R
Sbjct: 196 NSKLEEACVLFGS-RENWALVSWNCLLGGFVKKKKI-------VEARQFFDSMKVRDVVS 247
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
N +I +++ G +D A + F DV ++++M++ + + +EA ++F +M
Sbjct: 248 WNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM----P 303
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT--CMVDLLGRSGQLEK 400
E N+V++ +L G ++ E+ +F + P T M+ + G++ +
Sbjct: 304 ERNEVSWNAMLAGYVQG-------ERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISE 356
Query: 401 AHSLIMDYKDFCDAGTWGALLGA 423
A +L D D +W A++
Sbjct: 357 AKNLF-DKMPKRDPVSWAAMIAG 378
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 125/250 (50%), Gaps = 14/250 (5%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I Y + G +A R+F M + +S++AM++GY G + A+ +D M E++ V+W
Sbjct: 66 ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWN 125
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
MI GY + + +A+++F+ + E D W + Y QNG A ++ M ++N
Sbjct: 126 VMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKN--- 182
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWRE 302
+V+ +SA Q +E A +L G + VS N L+ K + A +
Sbjct: 183 -DVSWNALLSAYVQNSKLEEACVLF-----GSRENWALVSWNCLLGGFVKKKKIVEARQF 236
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F +K +DV+S++++IT +A +G+ EA +F +E + T+ +++ +V
Sbjct: 237 FDSMKVRDVVSWNTIITGYAQNGEIDEARQLF----DESPVHDVFTWTAMVSGYIQNRMV 292
Query: 363 EDGCKQFELM 372
E+ + F+ M
Sbjct: 293 EEARELFDRM 302
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 280/506 (55%), Gaps = 34/506 (6%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN--LSY--ARQVFDQIPKC 65
+ + + LKQ H+ +L+T H Q Y A L++ N LS+ + +VFD + K
Sbjct: 44 TTSLHHLKQAHALILRT---GHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKP 100
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV-- 123
FLW +I+ + + ++ILLY +M + +T+ +VL AC+ + E V
Sbjct: 101 NV-FLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQV 159
Query: 124 -------------------ICGYTKIGLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGN 163
I Y G + +A+R+ D E + + W+AM+ GY G
Sbjct: 160 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGE 219
Query: 164 MKAAKEFYDRMTEKNSV-TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
++AA+E ++ M +++ + TW AMI+G+ +CG V A++ FDE+ E D W+AM Y+Q
Sbjct: 220 VEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQ 279
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
G A+E++ M++E +R + + +SAC LG ++ + + +
Sbjct: 280 EGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 339
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
+L+ M++KCG +DLAW F ++ NK+V S+++MI A HG++++A+D+F KM I
Sbjct: 340 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DI 396
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
PN++TF+GVL AC+HGGLV+ G F M + +G++P EH C+VDLLGR+G L +A
Sbjct: 397 NPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 456
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
++ WGALLGAC+ H N ELGE + LLEL P+ +G LL+NIYA G
Sbjct: 457 KVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAG 516
Query: 463 KWKDSEIVKMMISETEKKKSPGCSWI 488
+W++ V+ ++ E K +PG S I
Sbjct: 517 RWEEVGEVRKLMKERGIKTTPGTSII 542
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 281/519 (54%), Gaps = 83/519 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L AR+VFD++P K WT++I + H H ++++ + +M +G+ + FTF+S+L
Sbjct: 115 SLVEARRVFDEMP-VKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASIL 173
Query: 111 NACARVPSLLE------------------------------------------------- 121
AC + L E
Sbjct: 174 PACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWN 233
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A+I GY + GL++DA +LF + +R+VI+W+ M+AGYA CG+++ A E +++M E+N V+
Sbjct: 234 AMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVS 293
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W MIAGY + G V+EA K+F + E + W A+ + QNG + A++++K M + NV
Sbjct: 294 WNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNV 353
Query: 242 RISEVAMVGAISACTQ-------LGDVEM----------AAILAKHVDEGCCDRTN---- 280
+S AM+ S Q G ++M A +L ++ N
Sbjct: 354 -VSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHE 412
Query: 281 -----------YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
V N L+ M++KCG ++ A + F R++ +D S S+MI +A +G S+E
Sbjct: 413 VVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKE 472
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
+L++F +M+ G++P++VTF+GVL+AC H GLV++G + F++MTR + I P EH CM+
Sbjct: 473 SLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMI 532
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLGR+G ++A+ LI DA WG+LL AC+ H N +LGE A+HL+ L P+
Sbjct: 533 DLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPA 592
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYA+ G+W D V+ + + + KK GCSWI
Sbjct: 593 PYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWI 631
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 273/505 (54%), Gaps = 33/505 (6%)
Query: 12 TFNQLKQVHSYL----LKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKT 67
F LKQ+H++L L + T + + + ++ + YA Q+F QI +
Sbjct: 25 NFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVV------SGTMDYAHQLFAQISQPDI 78
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP---------- 117
F+W ++IR ++ LY +M GV FTFS VL AC ++
Sbjct: 79 -FMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHG 137
Query: 118 -----------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
+ +I + G + A+ LFD+ A+R V+ WSA+ AGYA G +
Sbjct: 138 KVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDV 197
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A++ +D M K+ V+W MI Y K GE+ +A+K+FDE+ + D W AM YV +
Sbjct: 198 ARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLN 257
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC-DRTNYVSNA 285
K A+EM+ MR R +V M+ +SA LGD+E+ + + + + CC D + +SNA
Sbjct: 258 KEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNA 317
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
LI M++KCG + A F ++ KD S++S+I A HG ++E++++F +M ++PN
Sbjct: 318 LIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPN 377
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
++TF+ VL ACSH G V +G F LM VF I+P +H CMVD+LGR+G L +A I
Sbjct: 378 EITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFI 437
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+ +A W LLGAC+VH + ELG A LL++ +++G+ LL+NIYAS G+W
Sbjct: 438 DTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWD 497
Query: 466 DSEIVKMMISETEKKKSPGCSWISS 490
+ V+ ++ + KK G S I S
Sbjct: 498 GVQKVRKLMDDGGVKKKVGHSLIDS 522
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 184/572 (32%), Positives = 288/572 (50%), Gaps = 103/572 (18%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL----PGDNLSYARQVFDQ 61
L+ K+F LKQ+HS ++KT H L +L++ P NLSYA +F+
Sbjct: 38 LLSTCKSFQNLKQIHSQIIKT------GLHNTQFALSKLIEFCAISPFGNLSYALLLFES 91
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
I + QF+W ++IR + L + +I Y +M GV + +TF +L +CA+V + E
Sbjct: 92 IEQ-PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQE 150
Query: 122 ----------------------------------------------------AVICGYTK 129
A+I GYT
Sbjct: 151 GKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTL 210
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV--------- 180
G +DDA+RLF+ + R+ +SW+AM+AGYA G + A F+ M N
Sbjct: 211 RGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTV 270
Query: 181 -----------------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDA 210
+W+ A+I Y KCG++ +A+ +F+ I E D
Sbjct: 271 LSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDI 330
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W M Y K A+ +++ M+Q NV ++V V + AC LG +++ + +
Sbjct: 331 ISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAY 390
Query: 271 VDEGCCDRTNY-VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
+D+ TN + +LI M++KCG ++ A + F+ +K K + S+++MI+ A HG +
Sbjct: 391 IDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANM 450
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL++F +MR+EG EP+ +TF+GVL+ACSH GLVE G + F M + I P +H CM+
Sbjct: 451 ALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMI 510
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLGR+G ++A +L+ + + D WG+LLGAC+VH N ELGE AA+HL EL PE G
Sbjct: 511 DLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPG 570
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKK 481
LL+NIYA+ G+W D ++ +++ KK
Sbjct: 571 AYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 255/497 (51%), Gaps = 61/497 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ YAR++FDQ+PK + FLW +LIR + +++ LY+ MH G+ +TF V+
Sbjct: 78 MDYARKMFDQMPK-RDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVR 136
Query: 112 ACARVPSLLEA--VICGYTKIGLMDDA-------------------QRLFDSMAERNVIS 150
+CA + +L E V C K G D + +F M RN++S
Sbjct: 137 SCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVS 196
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV----------------------- 183
W+A++AGY K + M T+ N+VT V
Sbjct: 197 WTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGI 256
Query: 184 ------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
A+IA YGKCG V A+ +FD + + W AM Y QN A++
Sbjct: 257 KLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVK 316
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M+ E V + MV ISAC LG + + + V + ++NALI M++
Sbjct: 317 LFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYA 376
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG +DLA F R+ + V+S++SMI A A HG ++AL +F +M++EG++PN TF
Sbjct: 377 KCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAA 436
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
V TAC H GLVE+G K FE M R + I P EH CMVDLLGR+G L +A+ I
Sbjct: 437 VFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVE 496
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D WGALLG+C++H N EL E+ A L L P+ L++NIYA G+W+D+ ++
Sbjct: 497 PDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLR 556
Query: 472 MMISETEKKKSPGCSWI 488
++ E E KK PG S +
Sbjct: 557 KLMEERELKKIPGHSLV 573
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 29/236 (12%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
N K +H Y +K P LI L G N+ AR +FD + + W
Sbjct: 245 LNLGKLIHGYGIKLGVDPDVSL---TNALIALYGKCG-NVETARSLFDGM-VVQNLVSWN 299
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGL 132
++I + + ++ L+ +M V T SV++ACA + +L
Sbjct: 300 AMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGAL------------- 346
Query: 133 MDDAQRLFDSMAER-----NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
+ R + +R NV +A++ YA CGN+ A+E ++R+ ++ V+W +MI
Sbjct: 347 --NTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIG 404
Query: 188 GYGKCGEVREAKKVF----DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
G +A K+F DE +P++ +AA+ +G + + ++ M ++
Sbjct: 405 ACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRD 460
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
++ C+ L D ++ I A V GC + +I +D A + F ++ +DV
Sbjct: 36 LNCCSSLPD--LSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDV 93
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
++++I +AD G +EAL ++ M G+ P+ TF V+ +C+
Sbjct: 94 FLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCA 139
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 276/490 (56%), Gaps = 54/490 (11%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ +AR++FD+IP+ T W ++ R ++ + H R +++L+ +++R+ + + FTF ++
Sbjct: 60 IHHARKLFDKIPQPNTA-TWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIK 118
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
+C ++ + E ++I Y+K G ++DA ++F M ERNV+
Sbjct: 119 SCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVV 178
Query: 151 WSAMVAGYANCG-------------------------------NMKAAKEFYDRMTEKNS 179
W+A++ GY CG NM AA+E +D+M +++
Sbjct: 179 WTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDT 238
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
++W AM+ GY GEV +KVFDE+ E + W + YV+NG +E +K M E
Sbjct: 239 MSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVE 298
Query: 240 -NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+V ++ +V +SAC++LG ++M + + + +V N LI M++KCG ++
Sbjct: 299 GHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIEN 358
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A F+ + KD+IS++++I A HG + +AL MF +M++EG EP+ VTF+G+L+AC+H
Sbjct: 359 AVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTH 418
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GLV+DG F+ M + I P EH CMVDLLGR+G L++A + I DA W
Sbjct: 419 MGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWA 478
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALLGAC+++ N E+ E+A + L+EL P N +++NIY +G+ +D +K+ + +T
Sbjct: 479 ALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTG 538
Query: 479 KKKSPGCSWI 488
+K PGCS I
Sbjct: 539 FRKLPGCSVI 548
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 171/396 (43%), Gaps = 55/396 (13%)
Query: 57 QVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNACAR 115
+VFD++P+ + F W LI +V + F +++ + +M G V+ + FT +VL+AC+R
Sbjct: 259 KVFDEMPE-RNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSR 317
Query: 116 VPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
+ +L +I Y K G++++A +F+ + +++ISW+ +
Sbjct: 318 LGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTI 377
Query: 155 VAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKVFDEISE--- 207
+ G A G+ A +DRM E + VT+V +++ G V++ F + +
Sbjct: 378 INGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYS 437
Query: 208 --PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
P + M + G A+ + M E + A++G AC +VE+A
Sbjct: 438 IVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLG---ACRLYKNVEIAE 494
Query: 266 I-LAKHVDEGCCDRTNYVSNALIH----MHSKCGYLDLAWRE--FSRIKNKDVISYSSMI 318
+ L + ++ + N+V + I+ L +A R+ F ++ VI + +
Sbjct: 495 LALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSV 554
Query: 319 TAF--ADHGKSQ-EALDMFLK-----MRNEGIEPNQVTF-----IGVLTACSHGGLVEDG 365
F D S+ E++ LK +R+ G PN +G+ H L+
Sbjct: 555 VEFYSLDERHSETESIYRVLKGLTMLLRSHGYVPNLSDVAHGLGVGLWDPTIHSALLLQY 614
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
E++ V I P T + +++ R+ + KA
Sbjct: 615 NSVREVIFPVLAILPDDHSRTLLEEVVSRAQGVWKA 650
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/538 (34%), Positives = 287/538 (53%), Gaps = 64/538 (11%)
Query: 6 LVPRSKTFNQLKQVHSYLL-KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
L+ KT L Q H++++ K L + H F+I ++SY+ +F+++
Sbjct: 15 LIKSCKTIPHLHQFHAHIIHKGLEQDH--------FIISHFLSISTSVSYSTSIFNRLLN 66
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNACARVPSLLE-- 121
T FL+ L++ ++ F + L+ +M + L+ +T+ ++ C+ L E
Sbjct: 67 PST-FLYNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCSNELRLKEGE 125
Query: 122 -----AVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
A+ CG Y K + A+++FD + ERNV+SW+AMVAGYA+ G
Sbjct: 126 IVHGSAIRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVG 185
Query: 163 NMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI----------------- 205
+++ AK ++RM E+N +W AMI+G GK G++ A+KVFDE+
Sbjct: 186 DLENAKRVFERMPERNLPSWNAMISGLGKAGDLSGARKVFDEMVERNVVSFTVMIDGYAK 245
Query: 206 --------------SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
E D W+A+ Y +N A++++ M NV+ E MV
Sbjct: 246 VGDMASARALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMNVKPDEFIMVSL 305
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCD-RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+SAC+QLG+ ++A + ++ + D R +V ALI MH+KCG ++ A + F + ++D
Sbjct: 306 MSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLAALIDMHAKCGNMEKAVKLFQDMPSRD 365
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+I S+I + HG+ EA+++F +M +EG+ P+ V F +LTACS GGL+EDG F+
Sbjct: 366 LIPCCSLIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAFTVILTACSRGGLIEDGWHFFD 425
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
M + + P H CMVDLL R+GQL A+ L+ A WGALLGACK+H +
Sbjct: 426 TMKNKYSVVPSPNHYACMVDLLSRAGQLRAAYDLLKSMPLKPHACAWGALLGACKLHGDV 485
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL E A LLEL PEK G+ LL+NIYAS +W D IV+ + E +K PGCS+I
Sbjct: 486 ELREEVANRLLELEPEKAGSYVLLSNIYASANQWLDVSIVRDEMKERGIRKIPGCSYI 543
>gi|356564579|ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Glycine max]
Length = 576
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 278/475 (58%), Gaps = 33/475 (6%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
QVH + T Y L+ L GD + AR+VFD++ K+ W SL+
Sbjct: 129 QVHVFGFNTCV-------YVQTALLDLYSKIGD-MGTARKVFDEMAN-KSVVSWNSLLSG 179
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQ 137
+V + ++ L++++ V++ ++I GY K G + A
Sbjct: 180 YVKAGNLDEAQYLFSEIPGKDVIS------------------WNSMISGYAKAGNVGQAC 221
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
LF M ERN+ SW+AM+AG+ +CG++ +A+EF+D M +N V+W+ MIAGY K G+V
Sbjct: 222 TLFQRMPERNLSSWNAMIAGFIDCGSLVSAREFFDTMPRRNCVSWITMIAGYSKGGDVDS 281
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI--SEVAMVGAISAC 255
A+K+FD++ D + AM CY QN K A+E++ M ++++ + ++ + ISAC
Sbjct: 282 ARKLFDQMDHKDLLSYNAMIACYAQNSKPKEALELFNDMLKQDIYVHPDKMTLASVISAC 341
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
+QLGD+E + H+++ ++++ ALI +++KCG +D A+ F ++ +D+++YS
Sbjct: 342 SQLGDLEHWWWIESHMNDFGIVLDDHLATALIDLYAKCGSIDKAYELFHNLRKRDLVAYS 401
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI +GK+ +A+ +F +M E I PN VT+ G+LTA +H GLVE G + F M +
Sbjct: 402 AMIYGCGINGKASDAIKLFEQMLAECIGPNLVTYTGLLTAYNHAGLVEKGYQCFNSM-KD 460
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
+G+ P +H MVDL GR+G L++A+ LI++ +AG WGALL AC++H N ELGEI
Sbjct: 461 YGLVPSIDHYGIMVDLFGRAGYLDEAYKLILNMPMQPNAGVWGALLLACRLHNNVELGEI 520
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
A +H ++L + TG +LL++IYA++ KW D+ K + E K GCSW S+
Sbjct: 521 AVQHCIKLETDTTGYCSLLSSIYATVEKWDDA---KKLRKGMEGKDFTGCSWTSN 572
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 280/506 (55%), Gaps = 34/506 (6%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN--LSY--ARQVFDQIPKC 65
+ + + LKQ H+ +L+T H Q Y A L++ N LS+ + +VFD + K
Sbjct: 45 TTSLHHLKQAHALILRT---GHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKP 101
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV-- 123
FLW +I+ + + ++ILLY +M + +T+ +VL AC+ + E V
Sbjct: 102 NV-FLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQV 160
Query: 124 -------------------ICGYTKIGLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGN 163
I Y G + +A+R+ D E + + W+AM+ GY G
Sbjct: 161 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGE 220
Query: 164 MKAAKEFYDRMTEKNSV-TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
++AA+E ++ M +++ + TW AMI+G+ +CG V A++ FDE+ E D W+AM Y+Q
Sbjct: 221 VEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQ 280
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
G A+E++ M++E +R + + +SAC LG ++ + + +
Sbjct: 281 EGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 340
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
+L+ M++KCG +DLAW F ++ NK+V S+++MI A HG++++A+D+F KM I
Sbjct: 341 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DI 397
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
PN++TF+GVL AC+HGGLV+ G F M + +G++P EH C+VDLLGR+G L +A
Sbjct: 398 YPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 457
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
++ WGALLGAC+ H N ELGE + LLEL P+ +G LL+NIYA G
Sbjct: 458 KVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAG 517
Query: 463 KWKDSEIVKMMISETEKKKSPGCSWI 488
+W++ V+ ++ E K +PG S I
Sbjct: 518 RWEEVGEVRKLMKERGIKTTPGTSII 543
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 285/508 (56%), Gaps = 31/508 (6%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--DNLSYARQVFDQIP 63
++ + K+ +L+Q+H+ ++KT H + LI L G L YA VF +I
Sbjct: 12 VLDKCKSLCELRQIHAQMIKTNLLNH---QFTVSRLIAFCSLSGVSGGLDYASSVFSRI- 67
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS--SVLNACARV----- 116
+ F++ +LI+ ++ +S++LYA+M +SG FS SVL AC ++
Sbjct: 68 QHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDE 127
Query: 117 ----------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
P + +++ Y G ++ A+R+FD M R+V+SW++M+AGY
Sbjct: 128 GRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLK 187
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
G ++ A E +D M E++ V+ AMI GYGKCG A+KVF+ +S+ D W +M Y
Sbjct: 188 AGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAY 247
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD-RT 279
VQN A+++++ M +R A+V +SA LG VE L +V + +
Sbjct: 248 VQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSS 307
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMR 338
++ +ALI M+SKCGY++ A+ F I ++ ++ ++SMI+ A HG ++EALD+F++M
Sbjct: 308 GFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEME 367
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
IEPN++TF+G+L+ CSHGGLVE+G FE M + I P +H CM+DL GR+G+L
Sbjct: 368 RMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRL 427
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
E A +I + D W A+L A H + E+G+ AA +EL P+ + + LL+NIY
Sbjct: 428 EDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIY 487
Query: 459 ASMGKWKDSEIVKMMISETEKKKSPGCS 486
A G+W D +++M+ + KK GCS
Sbjct: 488 AKAGRWDDVAKIRLMMRQRGVKKIAGCS 515
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 261/497 (52%), Gaps = 62/497 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ YAR+VFD+ P+ + FLW ++IR + H F +I +Y++M GV GFT VL
Sbjct: 119 IGYARKVFDEFPE-PSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLK 177
Query: 112 ACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC+ VP L ++ Y K G ++ A+ +F+ + +RN++S
Sbjct: 178 ACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVS 237
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKN-SVTWVAMI----------------------- 186
W++M++GY G A + +M ++N W+A++
Sbjct: 238 WTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVV 297
Query: 187 ---------------AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
A Y KCG+V A+ FD++ P+ W AM Y +NGY A+
Sbjct: 298 KMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVG 357
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M +N+R + + AI AC Q+G +++A + ++++ +V+ ALI M +
Sbjct: 358 LFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFA 417
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG +DLA F R +KDV+ +S+MI + HG+ Q+A+D+F M+ G+ PN VTF+G
Sbjct: 418 KCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVG 477
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+LTAC+H GLVE+G + F M + +GI+ +H C+VDLLGRSG L +A+ I
Sbjct: 478 LLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIE 536
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
WGALLGACK++ + LGE AA L L P TG+ L+N+YAS W V+
Sbjct: 537 PGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVR 596
Query: 472 MMISETEKKKSPGCSWI 488
+++ E K G S I
Sbjct: 597 ILMREKGLSKDLGYSLI 613
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 179/415 (43%), Gaps = 72/415 (17%)
Query: 60 DQIPKCKTQF--LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
D IP F ++SL+ + V H Q ++A++ G++ SGF + +NA
Sbjct: 61 DYIPYSGFDFDSFFSSLLDHSVHKRHLNQ---IHAQLVVSGLVESGFLVTKFVNAS---- 113
Query: 118 SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT-- 175
IG + A+++FD E +V W+A++ GY++ A E Y RM
Sbjct: 114 ----------WNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQAS 163
Query: 176 -------------------------------------EKNSVTWVAMIAGYGKCGEVREA 198
E + ++A Y KCG V +A
Sbjct: 164 GVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQA 223
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+ VF+ + + + W +M Y QNG A+ ++ MRQ NV+ +A+V + A T +
Sbjct: 224 RIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDV 283
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
D+E + V + + + +L M++KCG + +A F +++ +V+ +++MI
Sbjct: 284 EDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMI 343
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE------DGCKQFELM 372
+ +A +G + EA+ +F +M ++ I + +T + AC+ G ++ D + E
Sbjct: 344 SGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYR 403
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
VF T ++D+ + G ++ A + D D W A++ +H
Sbjct: 404 NDVFVN-------TALIDMFAKCGSVDLARE-VFDRTLDKDVVVWSAMIVGYGLH 450
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/503 (35%), Positives = 273/503 (54%), Gaps = 33/503 (6%)
Query: 12 TFNQLKQVHSYLL----KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKT 67
T LKQ+H+ ++ + T + Y + I ++YA Q+F I + T
Sbjct: 25 TIGTLKQIHASMIVKGFNSNTSALRELIYASSIAI------SGTMAYAHQLFPHITEPDT 78
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV----------- 116
F+W ++IR +I LY++M V FTF VL AC R+
Sbjct: 79 -FMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHG 137
Query: 117 ----------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
+ +I + G + A+ LFD A+R+V++WSA+ AGYA G +
Sbjct: 138 RVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGV 197
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A++ +D M K+ V+W MI GY K GE+ A+K+FDE+ + D W AM YV G
Sbjct: 198 ARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSN 257
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE-GCCDRTNYVSNA 285
+ A+EM++ MR EV M+ +SACT LGD++ + + E G D + + NA
Sbjct: 258 QQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNA 317
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
LI M++KCG + A F ++ KDV +++S++ A HG +++++ +F +MR I P+
Sbjct: 318 LIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPD 377
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
++TF+GVL ACSH G VE+G + F+LM + I+P H CMVDLLGR+G L +A I
Sbjct: 378 EITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFI 437
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
K +A W LLGAC++H N ELG A LL++ +++G+ LL+NIYAS G+W
Sbjct: 438 DTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWD 497
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
E V+ ++ ++ +K GCS I
Sbjct: 498 GVEKVRKLMDDSGVRKEAGCSLI 520
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/459 (36%), Positives = 258/459 (56%), Gaps = 23/459 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++YA Q+F I + T F+W ++IR +I LY++M V FTF VL
Sbjct: 28 MAYAHQLFPHITEPDT-FMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLK 86
Query: 112 ACARV---------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC R+ + +I + G + A+ LFD A+R+V++
Sbjct: 87 ACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVA 146
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
WSA+ AGYA G + A++ +D M K+ V+W MI GY K GE+ A+K+FDE+ + D
Sbjct: 147 WSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDV 206
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W AM YV G + A+EM++ MR EV M+ +SACT LGD++ +
Sbjct: 207 VTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCC 266
Query: 271 VDE-GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
+ E G D + + NALI M++KCG + A F ++ KDV +++S++ A HG +++
Sbjct: 267 ISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEK 326
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
++ +F +MR I P+++TF+GVL ACSH G VE+G + F+LM + I+P H CMV
Sbjct: 327 SIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMV 386
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLGR+G L +A I K +A W LLGAC++H N ELG A LL++ +++G
Sbjct: 387 DLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESG 446
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ LL+NIYAS G+W E V+ ++ ++ +K GCS I
Sbjct: 447 DYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLI 485
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 246/437 (56%), Gaps = 19/437 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR++FD++P + W ++ + R ++ ++ + FT++
Sbjct: 209 MSEARELFDRMPG-RDVVSWNIMVSGYAR----RGDMVEARRLFDAAPVRDVFTWT---- 259
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
AV+ GY + G++++A+R+FD+M ERN +SW+AMVA Y M AKE +
Sbjct: 260 ----------AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELF 309
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M +N +W M+ GY + G + EAK VFD + + DA WAAM Y Q G ++ ++
Sbjct: 310 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 369
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ M + ++ A +S C + +E L + +V NAL+ M+
Sbjct: 370 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 429
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG ++ A F ++ +DV+S+++MI +A HG +EAL++F MR +P+ +T +G
Sbjct: 430 KCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVG 489
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL ACSH GLVE G F M FG+ EH TCM+DLLGR+G+L +AH L+ D
Sbjct: 490 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 549
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D+ WGALLGA ++H N ELG AA + EL PE G LL+NIYAS GKW+D+ ++
Sbjct: 550 PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMR 609
Query: 472 MMISETEKKKSPGCSWI 488
+M+ E KK PG SWI
Sbjct: 610 VMMEERGVKKVPGFSWI 626
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 183/422 (43%), Gaps = 65/422 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++F +P+ T + +++ + + + L+ + R ++++++L+A A
Sbjct: 57 AERLFAAMPRRSTS-TYNAMLAGYSANGRLPLAASLFRAIPR----PDNYSYNTLLHALA 111
Query: 115 RVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA- 156
SL +A +I + GL+ A+ FD E++ +SW+ M+A
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAA 171
Query: 157 ------------------------------GYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
GY G M A+E +DRM ++ V+W M+
Sbjct: 172 YVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMV 231
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
+GY + G++ EA+++FD D W A+ Y QNG + A ++ M + N +S
Sbjct: 232 SGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA-VSWN 290
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
AMV A + + AK + R N ++ +++ G L+ A F +
Sbjct: 291 AMVAAYIQRRMMDE-------AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 343
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
KD +S+++M+ A++ G S+E L +F++M G N+ F VL+ C+ +E G
Sbjct: 344 PQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGM 403
Query: 367 KQFELMTRV-FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ + R +G+ + ++ + + G +E A + + ++ D +W ++
Sbjct: 404 QLHGRLIRAGYGVGCFVGN--ALLAMYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYA 460
Query: 426 VH 427
H
Sbjct: 461 RH 462
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 246/437 (56%), Gaps = 19/437 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR++FD++P + W ++ + R ++ ++ + FT++
Sbjct: 209 MSEARELFDRMPG-RDVVSWNIMVSGYAR----RGDMVEARRLFDAAPVRDVFTWT---- 259
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
AV+ GY + G++++A+R+FD+M ERN +SW+AMVA Y M AKE +
Sbjct: 260 ----------AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELF 309
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M +N +W M+ GY + G + EAK VFD + + DA WAAM Y Q G ++ ++
Sbjct: 310 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 369
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ M + ++ A +S C + +E L + +V NAL+ M+
Sbjct: 370 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 429
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG ++ A F ++ +DV+S+++MI +A HG +EAL++F MR +P+ +T +G
Sbjct: 430 KCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVG 489
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL ACSH GLVE G F M FG+ EH TCM+DLLGR+G+L +AH L+ D
Sbjct: 490 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 549
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D+ WGALLGA ++H N ELG AA + EL PE G LL+NIYAS GKW+D+ ++
Sbjct: 550 PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMR 609
Query: 472 MMISETEKKKSPGCSWI 488
+M+ E KK PG SWI
Sbjct: 610 VMMEERGVKKVPGFSWI 626
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 53/333 (15%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG--------------------- 162
I + + G + DA+RLF +M R+ +++AM+AGY+ G
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYN 104
Query: 163 ----------NMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
++ A+ +D M ++SVT+ MI+ + G V A+ FD E DA
Sbjct: 105 TLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVS 164
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W M YV+NG + A ++ R E IS A+ +S Q G + A L +
Sbjct: 165 WNGMLAAYVRNGRVEEARGLFNS-RTEWDAISWNAL---MSGYVQWGKMSEARELFDRMP 220
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
R N ++ +++ G + A R F +DV +++++++ +A +G +EA
Sbjct: 221 ----GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARR 276
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F M E N V++ ++ A ++++ + F +M P + L
Sbjct: 277 VFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMM-------PCRNVASWNTMLT 325
Query: 393 G--RSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G ++G LE+A + + D DA +W A+L A
Sbjct: 326 GYAQAGMLEEAKA-VFDTMPQKDAVSWAAMLAA 357
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/462 (36%), Positives = 265/462 (57%), Gaps = 24/462 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++YA QVF QI + F+W +++R + + +LLY +M GV FTFS +L
Sbjct: 63 INYAHQVFAQITEPDI-FMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLK 121
Query: 112 ACAR--------------------VPSLLE-AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
C R V S + +I ++ G + A+ +F + ER+V+S
Sbjct: 122 GCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVS 181
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
WSA+ AGYA G + A++ +D M K+ V+W MI GY K GE+ A+ +FDE E D
Sbjct: 182 WSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDV 241
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W M YV G + A+EM++ MR EV M+ +SAC LGD+++ L
Sbjct: 242 VTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCS 301
Query: 271 VDEGC-CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
+ E D + + NAL+ M++KCG +++A + F +++ KDV +++S+I A HG ++E
Sbjct: 302 ISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEE 361
Query: 330 ALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
++ +F +M+ + I+PN++TF+GV+ ACSH G VE+G + F+LM + I+P H CM
Sbjct: 362 SIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCM 421
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKT 448
VDLLGR+G L +A LI + +A W LLGAC+VH N ELG +A LL+L +++
Sbjct: 422 VDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDES 481
Query: 449 GNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
G+ LL+NIYAS G+W +E V+ ++ + +K G S I +
Sbjct: 482 GDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEA 523
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 136/346 (39%), Gaps = 77/346 (22%)
Query: 158 YANCGNMKAAKEFYDRM------TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
+ NC N+ A K+ + + + + ++ + G + A +VF +I+EPD
Sbjct: 20 WKNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQITEPDIF 79
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W M Q+ + +Y M V+ + + CT+L + + V
Sbjct: 80 MWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGKV 139
Query: 272 DEGCCDRTNYVSNALIHMHSKCG--------YLDLAWRE--------------------- 302
+ + ++V N LI+ HS CG + DL R
Sbjct: 140 LKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVAR 199
Query: 303 --FSRIKNKDVISYSSMITAFADHGKSQEA------------------------------ 330
F + KD++S++ MIT + +G+ + A
Sbjct: 200 QIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQ 259
Query: 331 -LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK---QFELMTRVFGIKPLTEHL- 385
L+MF +MRN G P++VT + +L+AC+ G ++ G K MTR L+ L
Sbjct: 260 ALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTR----GDLSVLLG 315
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
+VD+ + G +E A + ++ D TW +++G H +AE
Sbjct: 316 NALVDMYAKCGSIEIALQVFKKMRE-KDVTTWNSVIGGLAFHGHAE 360
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 246/437 (56%), Gaps = 19/437 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR++FD++P + W ++ + R ++ ++ + FT++
Sbjct: 209 MSEARELFDRMPG-RDVVSWNIMVSGYAR----RGDMVEARRLFDAAPVRDVFTWT---- 259
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
AV+ GY + G++++A+R+FD+M ERN +SW+AMVA Y M AKE +
Sbjct: 260 ----------AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELF 309
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M +N +W M+ GY + G + EAK VFD + + DA WAAM Y Q G ++ ++
Sbjct: 310 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 369
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ M + ++ A +S C + +E L + +V NAL+ M+
Sbjct: 370 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 429
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG ++ A F ++ +DV+S+++MI +A HG +EAL++F MR +P+ +T +G
Sbjct: 430 KCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVG 489
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL ACSH GLVE G F M FG+ EH TCM+DLLGR+G+L +AH L+ D
Sbjct: 490 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 549
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D+ WGALLGA ++H N ELG AA + EL PE G LL+NIYAS GKW+D+ ++
Sbjct: 550 PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMR 609
Query: 472 MMISETEKKKSPGCSWI 488
+M+ E KK PG SWI
Sbjct: 610 VMMEERGVKKVPGFSWI 626
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 183/422 (43%), Gaps = 65/422 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++F +P+ T + +++ + + + L+ + R ++++++L+A A
Sbjct: 57 AERLFAAMPRRSTS-TYNAMLAGYSANGRLPLAASLFRAIPR----PDNYSYNTLLHALA 111
Query: 115 RVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA- 156
SL +A +I + GL+ A+ FD E++ +SW+ M+A
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAA 171
Query: 157 ------------------------------GYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
GY G M A+E +DRM ++ V+W M+
Sbjct: 172 YVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMV 231
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
+GY + G++ EA+++FD D W A+ Y QNG + A ++ M + N +S
Sbjct: 232 SGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA-VSWN 290
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
AMV A + + AK + R N ++ +++ G L+ A F +
Sbjct: 291 AMVAAYIQRRMMDE-------AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 343
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
KD +S+++M+ A++ G S+E L +F++M G N+ F VL+ C+ +E G
Sbjct: 344 PQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGM 403
Query: 367 KQFELMTRV-FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ + R +G+ + ++ + + G +E A + + ++ D +W ++
Sbjct: 404 QLHGRLIRAGYGVGCFVGN--ALLAMYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYA 460
Query: 426 VH 427
H
Sbjct: 461 RH 462
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 272/499 (54%), Gaps = 28/499 (5%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPKCKTQFL 70
+ L Q+H +L++ H Q HY + L++ P N +A +VF IP F+
Sbjct: 45 SLQYLTQLHGLVLRS---GHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNV-FI 100
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------- 121
W +I+ + + ++I Y +M + + FT+ ++ AC+ ++ E
Sbjct: 101 WNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVV 159
Query: 122 ------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
A I Y G ++DA+++F S E +V+ W+ M+ GY CG ++AAK
Sbjct: 160 KHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKG 218
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ +M KN +W MI G K G + +A+K+FDE+SE D W++M Y+ G K A
Sbjct: 219 LFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEA 278
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+E+++ M++E R + ++AC+ +G ++ + ++ + AL+ M
Sbjct: 279 LEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDM 338
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG LD+ W F +K +++ ++++MI A HG++++AL++F K++ ++PN +T
Sbjct: 339 YAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITL 398
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVLTAC+H G V+ G + F+ M +G+ P EH CMVDLLGRSG +A LI
Sbjct: 399 VGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP 458
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+A WGALLGAC++H N +L E + LLEL P+ +G LL+NIYA +G++ D
Sbjct: 459 MKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSK 518
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ + K PG S +
Sbjct: 519 IRKLMKDRGIKTVPGVSIV 537
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 272/499 (54%), Gaps = 28/499 (5%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPKCKTQFL 70
+ L Q+H+ +L++ H Q HY + L++ P N +A +VF IP F+
Sbjct: 45 SLQYLTQLHALVLRS---GHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNV-FI 100
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------- 121
W +I+ + + ++I Y +M + + FT+ ++ AC+ ++ E
Sbjct: 101 WNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVV 159
Query: 122 ------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
A I Y G ++DA+++F S E +V+ W+ M+ GY CG ++AAK
Sbjct: 160 KHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKG 218
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ +M KN +W MI G K G + +A+K+FDE+SE D W++M Y+ G K A
Sbjct: 219 LFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEA 278
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+E+++ M++E R + ++AC+ +G ++ + ++ + AL+ M
Sbjct: 279 LEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDM 338
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG LD+ W F +K +++ ++++MI A HG++++AL++F K++ ++PN +T
Sbjct: 339 YAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITL 398
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVLTAC+H G V+ G + F+ M +G+ P EH CMVDLLGRSG +A LI
Sbjct: 399 VGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP 458
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+A WGALLGAC++H N +L E + LLEL P+ +G LL+NIYA +G++ D
Sbjct: 459 MKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSK 518
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ K PG S +
Sbjct: 519 IRKLMKNRGIKTVPGVSIV 537
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 246/437 (56%), Gaps = 19/437 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR++FD++P + W ++ + R ++ ++ + FT++
Sbjct: 84 MSEARELFDRMPG-RDVVSWNIMVSGYAR----RGDMVEARRLFDAAPVRDVFTWT---- 134
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
AV+ GY + G++++A+R+FD+M ERN +SW+AMVA Y M AKE +
Sbjct: 135 ----------AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELF 184
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M +N +W M+ GY + G + EAK VFD + + DA WAAM Y Q G ++ ++
Sbjct: 185 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 244
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ M + ++ A +S C + +E L + +V NAL+ M+
Sbjct: 245 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 304
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG ++ A F ++ +DV+S+++MI +A HG +EAL++F MR +P+ +T +G
Sbjct: 305 KCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVG 364
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL ACSH GLVE G F M FG+ EH TCM+DLLGR+G+L +AH L+ D
Sbjct: 365 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 424
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D+ WGALLGA ++H N ELG AA + EL PE G LL+NIYAS GKW+D+ ++
Sbjct: 425 PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMR 484
Query: 472 MMISETEKKKSPGCSWI 488
+M+ E KK PG SWI
Sbjct: 485 VMMEERGVKKVPGFSWI 501
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 150/337 (44%), Gaps = 43/337 (12%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA-------------------------- 156
+I + GL+ A+ FD E++ +SW+ M+A
Sbjct: 12 MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISW 71
Query: 157 -----GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
GY G M A+E +DRM ++ V+W M++GY + G++ EA+++FD D
Sbjct: 72 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 131
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W A+ Y QNG + A ++ M + N +S AMV A + + AK +
Sbjct: 132 TWTAVVSGYAQNGMLEEARRVFDAMPERNA-VSWNAMVAAYIQRRMMDE-------AKEL 183
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
R N ++ +++ G L+ A F + KD +S+++M+ A++ G S+E L
Sbjct: 184 FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETL 243
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV-FGIKPLTEHLTCMVD 390
+F++M G N+ F VL+ C+ +E G + + R +G+ + ++
Sbjct: 244 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGN--ALLA 301
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+ + G +E A + + ++ D +W ++ H
Sbjct: 302 MYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYARH 337
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 118/232 (50%), Gaps = 12/232 (5%)
Query: 143 MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVF 202
M R+ ++++ M++ +AN G + A+ ++D EK++V+W M+A Y + G V EA+ +F
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+ +E D W A+ YVQ G A E++ M +V V+ +S + GD+
Sbjct: 61 NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDV----VSWNIMVSGYARRGDM- 115
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
+ A+ + + R + A++ +++ G L+ A R F + ++ +S+++M+ A+
Sbjct: 116 ---VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYI 172
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
EA ++F M N ++ +LT + G++E+ F+ M +
Sbjct: 173 QRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQ 220
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 271/506 (53%), Gaps = 26/506 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ ++ LKQVH+Y+ KT D L + +P D L YAR++F P
Sbjct: 11 LLTNCRSLKNLKQVHAYVCKTGLDT-DPIIAGKLLLHSAVSVP-DALDYARRLFLHFPNP 68
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHR-LGVLTSGFTFSSVLNACARVPSL----- 119
F+ +LIR + S++ + +M R L F+F+ +L A A SL
Sbjct: 69 DV-FMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQ 127
Query: 120 --LEAVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
+A++ G Y++ G + A+++F+ M E NV++W+A+V CG+
Sbjct: 128 LHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGD 187
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+K A ++RM +N +W M+AGY K GE+ A+K+F E+ D W+ M V + N
Sbjct: 188 VKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHN 247
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G+ A ++ ++Q +R +EV++ GA+SAC G +E IL +++ V+
Sbjct: 248 GFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVN 307
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
NAL+ +SKCG + +A F R+ K ++S++SMI A HG +EA+ +F +M GI
Sbjct: 308 NALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGI 367
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
P+ + FI +L ACSH GL+E G + F M ++ I+P EH CMVDL GR+GQL+KA+
Sbjct: 368 RPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAY 427
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
I+ A W LLGAC +H N +L E L EL P +G+ LL+NIYA G
Sbjct: 428 EFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAG 487
Query: 463 KWKDSEIVKMMISETEKKKSPGCSWI 488
KWKD V+ +++ K+PG S I
Sbjct: 488 KWKDVAAVRRSMTDQRMNKTPGWSMI 513
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 264/478 (55%), Gaps = 45/478 (9%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-----LTSGF----- 104
AR VFD++P+ K W +L+ +V ++ ++ +L+ + L GF
Sbjct: 176 ARSVFDRMPE-KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 105 -----------------TFSSVLNACARVPSLLEA-----------------VICGYTKI 130
++++++ A+ + EA ++ GY +
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
++++A+ LFD M ERN +SW+AM+AGY M+ AKE +D M +N TW MI GY
Sbjct: 295 RMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYA 354
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+CG++ EAK +FD++ + D WAAM Y Q+G++ A+ ++ M +E R++ +
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
A+S C + +E+ L + +G + +V NAL+ M+ KCG ++ A F + KD
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
++S+++MI ++ HG + AL F M+ EG++P+ T + VL+ACSH GLV+ G + F
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY 534
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
MT+ +G+ P ++H CMVDLLGR+G LE AH+L+ + DA WG LLGA +VH N
Sbjct: 535 TMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNT 594
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL E AA + + PE +G LL+N+YAS G+W D +++ + + KK PG SWI
Sbjct: 595 ELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 652
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 199/463 (42%), Gaps = 99/463 (21%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
L AR++FD++P+ + W +I+ +V + + ++ L+ M V +
Sbjct: 106 LRNGEFELARKLFDEMPE-RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----- 159
Query: 107 SSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
++ GY + G +DDA+ +FD M E+N +SW+A+++ Y M+
Sbjct: 160 -------------WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE 206
Query: 167 A-------------------------------KEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A ++F+D M ++ V+W +I GY + G++
Sbjct: 207 ACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKI 266
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
EA+++FDE D W AM Y+QN + A E++ M + N EV+ ++
Sbjct: 267 DEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----EVSWNAMLAGY 322
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
Q +EMA L D C R N +I +++CG + A F ++ +D +S++
Sbjct: 323 VQGERMEMAKEL---FDVMPC-RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS-----------HGGLV-- 362
+MI ++ G S EAL +F++M EG N+ +F L+ C+ HG LV
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 363 --EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWG 418
E GC G L + C G +E+A+ L M KD +W
Sbjct: 439 GYETGC--------FVGNALLLMYCKC--------GSIEEANDLFKEMAGKDIV---SWN 479
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPE--KTGNSALLANIYA 459
++ H GE+A R + E K ++ ++A + A
Sbjct: 480 TMIAGYSRH---GFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 149/304 (49%), Gaps = 22/304 (7%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+I GY + G + A++LFD M ER+++SW+ M+ GY N+ A+E ++ M E++ +
Sbjct: 100 GMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS 159
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W M++GY + G V +A+ VFD + E + W A+ YVQN + A ++K R+
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS-RENWA 218
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+S ++G ++ + A+ + R N +I +++ G +D A +
Sbjct: 219 LVSWNCLLGGFVKKKKI-------VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F +DV ++++M++ + + +EA ++F KM E N+V++ +L G
Sbjct: 272 LFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQG-- 325
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLT--CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
++ E+ +F + P T M+ + G++ +A +L D D +W A
Sbjct: 326 -----ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLF-DKMPKRDPVSWAA 379
Query: 420 LLGA 423
++
Sbjct: 380 MIAG 383
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 18/252 (7%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I Y + G ++A R+F M + +S++ M++GY G + A++ +D M E++ V+W
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
MI GY + + +A+++F+ + E D W M Y QNG A ++ M ++N
Sbjct: 131 VMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKN--- 187
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY--VS-NALIHMHSKCGYLDLAW 300
+V+ +SA Q +E A +L K R N+ VS N L+ K + A
Sbjct: 188 -DVSWNALLSAYVQNSKMEEACMLFK-------SRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
+ F + +DV+S++++IT +A GK EA +F +E + T+ +++
Sbjct: 240 QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNR 295
Query: 361 LVEDGCKQFELM 372
+VE+ + F+ M
Sbjct: 296 MVEEARELFDKM 307
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 262/492 (53%), Gaps = 44/492 (8%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-- 98
LI L L L A IP + +TSL+R +V H +I L+ +M
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHV 144
Query: 99 ---VLTSGFTFSSVLNACARVPSLLE--------AVICGYTKIGLMDDAQRLFDSMAERN 147
VL G + +N R+ + A++ GY + G + +A+ LFD M +RN
Sbjct: 145 SYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRN 204
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY------------------ 189
V+SW+AM++GYA G + A++ ++ M E+N V+W AM+ GY
Sbjct: 205 VVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE 264
Query: 190 -------------GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
G+ G V AK VF+++ E D W+AM Y QN + A+ ++ M
Sbjct: 265 HPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREM 324
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
VR + +++ ++ C L ++ + + D + +ALI M+ KCG L
Sbjct: 325 LWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNL 384
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
D A R F + KD++ ++SMIT +A HG ++AL +F MR G+ P+ +T+IG LTAC
Sbjct: 385 DKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTAC 444
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
S+ G V++G + F MT I+P EH +CMVDLLGRSG +E+A LI + DA
Sbjct: 445 SYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVI 504
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
WGAL+GAC++H NAE+ E+AA+ LLEL P G LL++IY S+G+W+D+ ++ IS
Sbjct: 505 WGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISS 564
Query: 477 TEKKKSPGCSWI 488
KSPGCSWI
Sbjct: 565 RNLNKSPGCSWI 576
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 140/304 (46%), Gaps = 20/304 (6%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A I + G ++ A+ F++M R S++A++AGY AA + RM ++ +
Sbjct: 22 ARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLAS 81
Query: 182 WVAMIAGYG-KCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+ A+I+G + + +A I P + ++ YV++G AI +++ M +
Sbjct: 82 YNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER 141
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
N +S ++G + ++ + A+ + + DR A++ + + G + A
Sbjct: 142 N-HVSYTVLLGGLLDAGRVNE-------ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F + ++V+S+++MI+ +A +G+ A +F M E N+V++ +L
Sbjct: 194 RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQA 249
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
G VED + F M P+ MV G+ G ++ A ++ ++ D GTW A
Sbjct: 250 GHVEDAAELFNAMPE----HPVAACNAMMVG-FGQRGMVDAAKTVFEKMRER-DDGTWSA 303
Query: 420 LLGA 423
++ A
Sbjct: 304 MIKA 307
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/455 (34%), Positives = 265/455 (58%), Gaps = 22/455 (4%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ +R++FDQ+P + W ++I +V ++ L+ +M ++++++
Sbjct: 210 NILESRRLFDQMPS-RNIVSWNAMISAYVQRCEIDEASRLFEEMPE----RDSVSWTTMI 264
Query: 111 NACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
N R+ L EA +I GY + +D+A+R FD + +V+ W+A
Sbjct: 265 NGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNA 324
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
M+AGYA+ G + A RM K+ VTW MI+ Y + G++ A K+F+E+ E D W
Sbjct: 325 MIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSW 384
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
++ ++ NG A++ + +M E + +++ +S+C + +++ L + V +
Sbjct: 385 NSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVK 444
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
G V+NALI M++KCG + A F+ I + DVIS++S+I +A +G +EAL +
Sbjct: 445 GGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKL 504
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F +M +EG+ P++VTFIG+L+AC+H G+V+ G K F+ M++V+ I+PL EH CMVDLLG
Sbjct: 505 FEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLG 564
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R G+L++A ++ K AG WGALLGAC+ H N ELG +AA L E P KT N L
Sbjct: 565 RVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVL 624
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+NI+A +W + + V+M+++ + K PGCSW+
Sbjct: 625 LSNIHAEANRWNEVQEVRMLMNASSTVKEPGCSWV 659
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 172/361 (47%), Gaps = 46/361 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFT------ 105
++ AR +FD++P+ + W +++ ++ + F ++ L+ M R + +
Sbjct: 22 INAARNLFDKMPR-RNLVSWNTMVSGYLHNGKFDEAYKLFVIMPRRDLFSWTLMITCYTR 80
Query: 106 ----------FSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
F S+ + + + A+I GY K G +++A+RLFD M +N+ISW++M+
Sbjct: 81 NGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSML 140
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
AGY M+ EF++ M E++ V+W M+ G+ + G++ A K F E +P+ W
Sbjct: 141 AGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWKFFQETQKPNVVSWVT 200
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA------ISACTQLGD-------VE 262
M + +NG + ++ M N+ +S AM+ A I ++L + V
Sbjct: 201 MLSGFARNGNILESRRLFDQMPSRNI-VSWNAMISAYVQRCEIDEASRLFEEMPERDSVS 259
Query: 263 MAAILAKHVDEGCCDRTNYVSN-----------ALIHMHSKCGYLDLAWREFSRIKNKDV 311
++ +V G D + N A+I + +C +D A R F I DV
Sbjct: 260 WTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDV 319
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+ +++MI +A HG+ EAL + +M N+ + VT+ +++ + G ++ K FE
Sbjct: 320 VCWNAMIAGYAHHGRINEALCLSKRMVNK----DMVTWNTMISCYAQVGQMDRAVKIFEE 375
Query: 372 M 372
M
Sbjct: 376 M 376
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 22/295 (7%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I Y K G ++ A+ LFD M RN++SW+ MV+GY + G A + + M ++ +
Sbjct: 11 SMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMPRRDLFS 70
Query: 182 WVAMIAGYGKCGEVREAKKVFDEIS---EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
W MI Y + GEV +A+++FD + +CW AM YV+ G A ++ M
Sbjct: 71 WTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPV 130
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+N+ IS +M ++ TQ + + +DE N + + I + G LD
Sbjct: 131 KNL-ISWNSM---LAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQV----GDLDS 182
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
AW+ F + +V+S+ +M++ FA +G E+ +F +M + I V++ +++A
Sbjct: 183 AWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNI----VSWNAMISAYVQ 238
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDF 411
+++ + FE M + T M++ R G+L++A L+ M Y++
Sbjct: 239 RCEIDEASRLFEEMPERDSVS-----WTTMINGYVRIGKLDEARELLNEMPYRNI 288
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 266/479 (55%), Gaps = 25/479 (5%)
Query: 14 NQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTS 73
N+LKQ+ +Y L+ + + Q ++ LLQ+P ++ YA ++FD IPK T FL+
Sbjct: 2 NRLKQIQAYTLR------NGIEHTKQLIVSLLQIP--SIPYAHKLFDFIPK-PTVFLYNK 52
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI--CGYTKIG 131
LI+ + H Q LY +M G + +F+ + +ACA + S + + + K G
Sbjct: 53 LIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSG 112
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
D V + +A+V YA G + A++ +D MT ++ TW +MIAGY +
Sbjct: 113 FGCD------------VFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYAR 160
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMVG 250
CG++ A ++F + + + W AM Y QNG A+ M+ +M +E +R +EV +
Sbjct: 161 CGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLAS 220
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK- 309
+ AC LG +E+ + + + YVSNAL+ M+++CG +D AW F I +
Sbjct: 221 VLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRR 280
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
++ S++SMI A HG+ EA+++F KM EG P+ VTF+GVL AC+HGG+V +G F
Sbjct: 281 NLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFF 340
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
E M R F I P EH CMVDLLGR+G+L +AH LI+ D+ WG LLGAC H +
Sbjct: 341 ESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGH 400
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL E AA L EL P GN +L+NIYA+ G+W ++ ++ + K+ G S+I
Sbjct: 401 VELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFI 459
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 157/447 (35%), Positives = 256/447 (57%), Gaps = 14/447 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-----SGFTFSSV 109
AR++FD + W +L+ +V + ++ ++ KM + V++ SG+
Sbjct: 250 ARELFDSRTEWDA-ISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGD 308
Query: 110 LNACARVPSLLE--------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
+ R+ + A++ GY + G++++A+R+FD+M ++N +SW+AM+A Y
Sbjct: 309 MAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQR 368
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
M+ AKE +D M +N +W M+ GY + G + EA+ +F + + DA WAAM Y
Sbjct: 369 RMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYS 428
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
Q G+++ ++++K M + ++ A +S C + +E L + + +
Sbjct: 429 QIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCF 488
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V NAL+ M+ KCG ++ A F ++ +DV+S+++MI +A HG +EAL++F MR
Sbjct: 489 VGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTS 548
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
+P+ +T +GVL ACSH GLVE G F M R FG+ EH TCM+DLLGR+G+L++A
Sbjct: 549 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEA 608
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
+L+ D D+ WGALLGA ++H N+ELG AA + EL PE G LL+NIYAS
Sbjct: 609 VNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASS 668
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
GKW+D + ++ ++ E KK PG SWI
Sbjct: 669 GKWRDVDKMRHIMHERGVKKVPGFSWI 695
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 200/414 (48%), Gaps = 36/414 (8%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
+L Q S+ +++ +P D + Y L+ L + +L+ R +FD++P K + +
Sbjct: 153 RLPQALSFF-RSIPRP-DSFSY--NTLLHALGV-SSSLADVRALFDEMP-VKDSVSYNVM 206
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMD 134
I +H H ++ A+ + F + +A + ++ Y + G +
Sbjct: 207 ISSHANHG-----LVSLARHY--------FDLAPEKDAVS-----WNGMLAAYVRNGRIQ 248
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
+A+ LFDS E + ISW+A++AGY ++ A++ +++M +++ V+W M++GY + G+
Sbjct: 249 EARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGD 308
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+ EA+++FD D W A+ Y QNG + A ++ M +N +S AM+ A
Sbjct: 309 MAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNA-VSWNAMMAAYVQ 367
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
+ + AK + + R N ++ +++ G LD A F + KD +S+
Sbjct: 368 RRMMEE-------AKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSW 420
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK-QFELMT 373
++M+ A++ G S+E L +F +M G N+ F VL+ C+ +E G + L+
Sbjct: 421 AAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIK 480
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+G+ + ++ + + G +E+AHS + ++ D +W ++ H
Sbjct: 481 AGYGVGCFVGN--ALLAMYFKCGSMEEAHSAFEEMEER-DVVSWNTMIAGYARH 531
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 57/335 (17%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF------------- 170
I + + G + DA+RLF +M R+ +++ M+AGYA G + A F
Sbjct: 114 ITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYN 173
Query: 171 ------------------YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
+D M K+SV++ MI+ + G V A+ FD E DA
Sbjct: 174 TLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVS 233
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W M YV+NG + A E++ R E IS A+ ++ Q +E A + +
Sbjct: 234 WNGMLAAYVRNGRIQEARELFDS-RTEWDAISWNAL---MAGYVQRSQIEEAQKMFNKMP 289
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ R N ++ +++ G + A R F +DV +++++++ +A +G +EA
Sbjct: 290 Q----RDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKR 345
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F M ++ N V++ ++ A ++E+ + F+ M P + L
Sbjct: 346 VFDAMPDK----NAVSWNAMMAAYVQRRMMEEAKELFDAM-------PCRNVASWNTMLT 394
Query: 393 G--RSGQLEKAHSL--IMDYKDFCDAGTWGALLGA 423
G ++G L++A ++ +M K DA +W A+L A
Sbjct: 395 GYAQAGMLDEARAIFGMMPQK---DAVSWAAMLAA 426
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 261/492 (53%), Gaps = 44/492 (8%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-- 98
LI L L L A IP + +TSL+R +V H +I L+ +M
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHV 144
Query: 99 ---VLTSGFTFSSVLNACARVPSLLE--------AVICGYTKIGLMDDAQRLFDSMAERN 147
VL G + +N R+ + A++ GY + G + +A+ LFD M +RN
Sbjct: 145 SYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRN 204
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY------------------ 189
V+SW+AM++GYA G + A++ ++ M E+N V+W AM+ GY
Sbjct: 205 VVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE 264
Query: 190 -------------GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
G+ G V AK VF+++ E D W+AM Y QN + A+ ++ M
Sbjct: 265 HPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREM 324
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
VR + +++ ++ C L ++ + + D + +ALI M+ KCG L
Sbjct: 325 LWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNL 384
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
D A R F + KD++ ++SMIT +A HG ++AL +F MR G+ P+ +T+IG LTAC
Sbjct: 385 DKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTAC 444
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
S+ G V++G + F MT I+P EH +CMVDLLGRSG +E+A LI + DA
Sbjct: 445 SYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVI 504
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
WGAL+GAC++H NAE+ E AA+ LLEL P G LL++IY S+G+W+D+ ++ IS
Sbjct: 505 WGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISS 564
Query: 477 TEKKKSPGCSWI 488
KSPGCSWI
Sbjct: 565 RNLNKSPGCSWI 576
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 141/306 (46%), Gaps = 24/306 (7%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A I + G ++ A+ F++M R S++A++AGY AA + RM ++ +
Sbjct: 22 ARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLAS 81
Query: 182 WVAMIAGYG-KCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+ A+I+G + + +A I P + ++ YV++G AI +++ M +
Sbjct: 82 YNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER 141
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
N +S ++G + ++ + A+ + + DR A++ + + G + A
Sbjct: 142 N-HVSYTVLLGGLLDAGRVNE-------ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F + ++V+S+++MI+ +A +G+ A +F M E N+V++ +L
Sbjct: 194 RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQA 249
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC--DAGTW 417
G VED + F M P+ MV G+ G ++ A ++ ++ C D GTW
Sbjct: 250 GHVEDAAELFNAMPE----HPVAACNAMMVG-FGQRGMVDAAKTV---FEKMCERDDGTW 301
Query: 418 GALLGA 423
A++ A
Sbjct: 302 SAMIKA 307
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 261/492 (53%), Gaps = 44/492 (8%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-- 98
LI L L L A IP + +TSL+R +V H +I L+ +M
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHV 144
Query: 99 ---VLTSGFTFSSVLNACARVPSLLE--------AVICGYTKIGLMDDAQRLFDSMAERN 147
VL G + +N R+ + A++ GY + G + +A+ LFD M +RN
Sbjct: 145 SYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRN 204
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY------------------ 189
V+SW+AM++GYA G + A++ ++ M E+N V+W AM+ GY
Sbjct: 205 VVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPE 264
Query: 190 -------------GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
G+ G V AK VF+++ E D W+AM Y QN + A+ ++ M
Sbjct: 265 HPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREM 324
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
VR + +++ ++ C L ++ + + D + +ALI M+ KCG L
Sbjct: 325 LWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNL 384
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
D A R F + KD++ ++SMIT +A HG ++AL +F MR G+ P+ +T+IG LTAC
Sbjct: 385 DKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTAC 444
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
S+ G V++G + F MT I+P EH +CMVDLLGRSG +E+A LI + DA
Sbjct: 445 SYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVI 504
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
WGAL+GAC++H NAE+ E AA+ LLEL P G LL++IY S+G+W+D+ ++ IS
Sbjct: 505 WGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISS 564
Query: 477 TEKKKSPGCSWI 488
KSPGCSWI
Sbjct: 565 RNLNKSPGCSWI 576
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 141/306 (46%), Gaps = 24/306 (7%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A I + G ++ A+ F++M R S++A++AGY AA + RM ++ +
Sbjct: 22 ARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLAS 81
Query: 182 WVAMIAGYG-KCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+ A+I+G + + +A I P + ++ YV++G AI +++ M +
Sbjct: 82 YNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER 141
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
N +S ++G + ++ + A+ + + DR A++ + + G + A
Sbjct: 142 N-HVSYTVLLGGLLDAGRVNE-------ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F + ++V+S+++MI+ +A +G+ A +F M E N+V++ +L
Sbjct: 194 RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQA 249
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC--DAGTW 417
G VED + F M P+ MV G+ G ++ A ++ ++ C D GTW
Sbjct: 250 GHVEDAAELFNAMPE----HPVAACNAMMVG-FGQRGMVDAAKTV---FEKMCERDDGTW 301
Query: 418 GALLGA 423
A++ A
Sbjct: 302 SAMIKA 307
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/525 (31%), Positives = 274/525 (52%), Gaps = 55/525 (10%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQVH + + QY+ Y + + ++YARQ+FDQIP LW S+ R
Sbjct: 115 KQVHQIQAQIIANGF-QYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIA-LWNSMFR 172
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-------VICG--- 126
+ +R+ + L+ +M + + + FTF VL +C ++ +L+E + CG
Sbjct: 173 GYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRG 232
Query: 127 -----------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
Y+ G + DA ++F M ERNV++W++M+ GY ++ +A+ +D
Sbjct: 233 NPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAP 292
Query: 176 EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKV 235
E++ V W M++GY + G++ EA+K+F E+ D W + Y NG +A +++
Sbjct: 293 ERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEE 352
Query: 236 MRQEN--------------------------------VRISEVAMVGAISACTQLGDVEM 263
M + N V ++ +V +SAC +LG +++
Sbjct: 353 MPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDL 412
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+ + + YV NAL+ M++KCG ++ A F + KD+IS++++I A
Sbjct: 413 GKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAM 472
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
H + +AL++F +M+N G +P+ +TFIG+L AC+H GLVEDG F+ M + I P E
Sbjct: 473 HSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIE 532
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
H CMVD+L R+G+LE+A + + D W LLGAC+++ N EL E+A + L+EL
Sbjct: 533 HYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIEL 592
Query: 444 GPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
P+ N +L+NIY G+W+D +K+ + +T KK PGCS I
Sbjct: 593 EPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLI 637
>gi|115441777|ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|20161377|dbj|BAB90301.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|125573076|gb|EAZ14591.1| hypothetical protein OsJ_04514 [Oryza sativa Japonica Group]
Length = 533
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 220/369 (59%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
+++C + ++ + DA+ LF +M R +SW+AMV Y N G++ +A+ +D+M ++S
Sbjct: 151 FNSLLCAHARLASVPDAESLFVAMPSRTQVSWNAMVVVYVNAGDVSSARRVFDQMPTRDS 210
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W +I GY KCG +R A++VFD + + W AM Y Q+G K ++ +++ M
Sbjct: 211 TSWSVLIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYAQSGVPKESLALFREMEAA 270
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ MVG ISA +Q+G E+A + +VD+ +R + V AL+ MH+KCG +D A
Sbjct: 271 GIEPDAATMVGVISAASQIGSTELAGWVGSYVDKKRIERNDKVLTALVDMHAKCGNVDEA 330
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F I D Y+++I+ A HG ++ AL +F +M+ + + P+ +TF+GVLTACSH
Sbjct: 331 LSAFREIAQPDAYPYTALISGLAAHGHAKLALQVFERMQAQSVWPDPITFVGVLTACSHA 390
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV+ G +E M + +G++ +H C+VD+LGR+G+LE+A ++ G GA
Sbjct: 391 GLVDKGLDYWEAMVKYYGMERRADHYACVVDMLGRAGRLEEAFEMVQTMPMGPHPGALGA 450
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL ACK H N E+ EI A L EL P TGN +L+NIYA +W+++E ++ ++
Sbjct: 451 LLSACKTHGNVEIAEIVANKLFELEPHNTGNYIMLSNIYAEKEQWEEAERIRSVMRTRLP 510
Query: 480 KKSPGCSWI 488
K PG SW+
Sbjct: 511 FKQPGSSWV 519
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 133/326 (40%), Gaps = 84/326 (25%)
Query: 51 NLSYARQVFDQIP---------------KC---------------KTQFLWTSLIRNHVL 80
++S AR+VFDQ+P KC K WT++I +
Sbjct: 194 DVSSARRVFDQMPTRDSTSWSVLIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYAQ 253
Query: 81 HAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLF 140
++S+ L+ +M G+ T V++A +++ S + G+ +G D +R+
Sbjct: 254 SGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGS---TELAGW--VGSYVDKKRI- 307
Query: 141 DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKK 200
ERN +A+V +A CGN+ A + + + ++ + A+I+G G + A +
Sbjct: 308 ----ERNDKVLTALVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGHAKLALQ 363
Query: 201 VFDEISE----PDASCW-AAMTVC----YVQNG--YAKAAIEMYKVMRQENVRISEVAMV 249
VF+ + PD + +T C V G Y +A ++ Y + R+ + V M+
Sbjct: 364 VFERMQAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACVVDML 423
Query: 250 GA--------------------------ISACTQLGDVEMAAILAKHVDEGCCDRT-NYV 282
G +SAC G+VE+A I+A + E T NY+
Sbjct: 424 GRAGRLEEAFEMVQTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPHNTGNYI 483
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKN 308
+ I+ + W E RI++
Sbjct: 484 MLSNIYAEKE------QWEEAERIRS 503
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/525 (31%), Positives = 274/525 (52%), Gaps = 55/525 (10%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQVH + + QY+ Y + + ++YARQ+FDQIP LW S+ R
Sbjct: 52 KQVHQIQAQIIANGF-QYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIA-LWNSMFR 109
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-------VICG--- 126
+ +R+ + L+ +M + + + FTF VL +C ++ +L+E + CG
Sbjct: 110 GYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRG 169
Query: 127 -----------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
Y+ G + DA ++F M ERNV++W++M+ GY ++ +A+ +D
Sbjct: 170 NPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAP 229
Query: 176 EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKV 235
E++ V W M++GY + G++ EA+K+F E+ D W + Y NG +A +++
Sbjct: 230 ERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEE 289
Query: 236 MRQEN--------------------------------VRISEVAMVGAISACTQLGDVEM 263
M + N V ++ +V +SAC +LG +++
Sbjct: 290 MPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDL 349
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+ + + YV NAL+ M++KCG ++ A F + KD+IS++++I A
Sbjct: 350 GKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAM 409
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
H + +AL++F +M+N G +P+ +TFIG+L AC+H GLVEDG F+ M + I P E
Sbjct: 410 HSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIE 469
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
H CMVD+L R+G+LE+A + + D W LLGAC+++ N EL E+A + L+EL
Sbjct: 470 HYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIEL 529
Query: 444 GPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
P+ N +L+NIY G+W+D +K+ + +T KK PGCS I
Sbjct: 530 EPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLI 574
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 266/439 (60%), Gaps = 24/439 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR +FD++P + + W +I + + ++ L+ ++ V F ++
Sbjct: 231 LDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FAWT---- 281
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A++ G+ + G++D+A R+F+ M E+N +SW+AM+AGY ++ A+E +
Sbjct: 282 ----------AMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D+M +N+ +W M+ GY +CG + +AK +FDE+ + D WAAM Y Q+G ++ A+
Sbjct: 332 DQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALH 391
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL-AKHVDEGCCDRTNYVS-NALIHM 289
++ M+++ ++ A+ A+S+C ++ +E+ L + V G +T Y++ NAL+ M
Sbjct: 392 LFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF--QTGYIAGNALLAM 449
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG ++ A+ F I KD++S+++MI +A HG +EAL +F M+ I+P+ VT
Sbjct: 450 YGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTL 508
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL+ACSH GLV+ G + F M + +GI +H TCM+DLLGR+G+L++A +L+
Sbjct: 509 VGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMP 568
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+ DA TWGALLGA ++H + ELGE AA + E+ P+ +G LL+N+YA+ G+W++
Sbjct: 569 FYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628
Query: 470 VKMMISETEKKKSPGCSWI 488
++ + + KK PG SW+
Sbjct: 629 MRSKMRDKGVKKVPGYSWV 647
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 155/315 (49%), Gaps = 19/315 (6%)
Query: 108 SVLNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
SV N R ++ A+I GY D A+++F+ M +R++ISW+ M++GY GN+ A
Sbjct: 81 SVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSA 140
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A+ +++M EK+ V+W AM++G+ + G V EA+K+FD++ + W + YVQNG
Sbjct: 141 ARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRI 200
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A ++ + +S ++G +L D A+ + + R N +
Sbjct: 201 EDARRLFDSKMDWEI-VSWNCLMGGYVRKKRLDD-------ARSLFDRMPVRDKISWNIM 252
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I +++ G L A R F + +DV ++++M++ F +G EA +F +M E N+
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKNE 308
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
V++ ++ +E + F+ M T MV + G +++A ++
Sbjct: 309 VSWNAMIAGYVQSQQIEKARELFDQMP-----SRNTSSWNTMVTGYAQCGNIDQA-KILF 362
Query: 407 DYKDFCDAGTWGALL 421
D D +W A++
Sbjct: 363 DEMPQRDCISWAAMI 377
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I Y + G + A +F+ M R+ ++++AM++GY + A++ +++M +++ ++W
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWN 126
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
M++GY K G + A+ +F+++ E D W AM + QNG+ + A +++ M +N
Sbjct: 127 VMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKN--- 183
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
E++ G +SA Q G +E A+ + + D N L+ + + LD A F
Sbjct: 184 -EISWNGLLSAYVQNGRIED----ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLF 238
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
R+ +D IS++ MIT +A +G EA +F ++ P + F G V+
Sbjct: 239 DRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMVS---GFVQ 289
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLG--RSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+G + TR+F P ++ + G +S Q+EKA L D + +W ++
Sbjct: 290 NG--MLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF-DQMPSRNTSSWNTMV 346
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 26/251 (10%)
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
E+K I + D W Y++ G ++A+ ++ MR+ + ++ AM+ +
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRST-VTYNAMISGYLSNN 105
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
+ A+ V E DR N ++ + K G L A F+++ KDV+S+++
Sbjct: 106 KFD-------CARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNA 158
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
M++ FA +G +EA +F +M + N++++ G+L+A G +ED R+F
Sbjct: 159 MLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA-------RRLF 207
Query: 377 GIKPLTEHLT--CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
K E ++ C++ R +L+ A SL D D +W ++ N L E
Sbjct: 208 DSKMDWEIVSWNCLMGGYVRKKRLDDARSLF-DRMPVRDKISWNIMITG--YAQNGLLSE 264
Query: 435 IAARHLLELGP 445
AR L E P
Sbjct: 265 --ARRLFEELP 273
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 266/485 (54%), Gaps = 53/485 (10%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR+ FD +P+ + WT+++R +V ++ L+ +M V++ ++ +L
Sbjct: 94 VSEARKAFDTMPE-RNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVS----WTVMLG 148
Query: 112 ACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
+V + EA +I GY + G + +A+ LFD M RNVISW+ M
Sbjct: 149 GLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTM 208
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY------------------------- 189
++GY G + A++ ++ M EKN V+W AM+ GY
Sbjct: 209 ISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACN 268
Query: 190 ------GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
G+ GEV +A++VFD+I E D W+AM Y + G+ A+ ++ +M++E V+
Sbjct: 269 AMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQS 328
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+ +++ +S C L ++ + + + D +V++ LI M+ KCG L A + F
Sbjct: 329 NFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIF 388
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
R KD++ ++S+IT +A HG +EAL +F +M + G+ + VTF+GVL+ACS+ G V+
Sbjct: 389 DRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVK 448
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G + FE M + ++P TEH CMVDLLGR+G + A LI DA WGALLGA
Sbjct: 449 EGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGA 508
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C+ H+N L E+AA+ LL+L P+ G LL+NIYAS G+W D ++ + + KSP
Sbjct: 509 CRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSP 568
Query: 484 GCSWI 488
GCSWI
Sbjct: 569 GCSWI 573
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 158/311 (50%), Gaps = 22/311 (7%)
Query: 113 CARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
C V + I Y +IG ++ A+R+FD M ++ ++SW++MVAGY + A+ +D
Sbjct: 12 CTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFD 71
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+M E+N+V+W +I+GY K V EA+K FD + E + W AM YVQ G A +
Sbjct: 72 KMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETL 131
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M ++NV +S M+G + ++ E + + RTN +S + +
Sbjct: 132 FWQMPEKNV-VSWTVMLGGLIQVRRID--EARGLFDIMPVKDVVARTNMISG-----YCQ 183
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
G L A F + ++VIS+++MI+ + +G+ A +F M E N+V++ +
Sbjct: 184 EGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP----EKNEVSWTAM 239
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLEKAHSLIMDYKD 410
L + GG +E+ + F+ M P+ + C M+ G++G++ KA + D
Sbjct: 240 LMGYTQGGRIEEASELFDAM-------PVKAVVACNAMILGFGQNGEVAKARQ-VFDQIR 291
Query: 411 FCDAGTWGALL 421
D GTW A++
Sbjct: 292 EKDDGTWSAMI 302
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 267/506 (52%), Gaps = 26/506 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + + KQ+H+ + KT H + + L+ D L YA ++F P
Sbjct: 8 LLSKCSSLKPTKQIHAQICKT--GLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNP 65
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTS-GFTFSSVLNACARVPSLLEAV- 123
T F+ +LIR+ L S+ + ++ R L+ FTF+ L A A L +
Sbjct: 66 DT-FMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQ 124
Query: 124 --------------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
I Y + G A+R+FD M+E NV++W+A++ CG+
Sbjct: 125 LHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGD 184
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
++ A++ + M +N +W M+AGY K GE+ A++VF E+ D W+ M V + N
Sbjct: 185 VEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHN 244
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G A ++ + +E +R +EV++ G +SAC Q G E IL V++ V+
Sbjct: 245 GCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVN 304
Query: 284 NALIHMHSKCGYLDLAWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
NALI +SKCG + +A F + + ++S++S+I A HG +EA+ +F +M G+
Sbjct: 305 NALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGV 364
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
P+ +TFI +L ACSH GLVE+GC F M ++GI+P EH CMVDL GR+ +L+KA+
Sbjct: 365 RPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAY 424
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
I + +A W LLGAC +H N E+ E+ L E+ P+ +G+ LL+N+YA G
Sbjct: 425 EFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAG 484
Query: 463 KWKDSEIVKMMISETEKKKSPGCSWI 488
KWKD ++ ++E KK+PG S I
Sbjct: 485 KWKDVSSIRRTMTEHSMKKTPGWSMI 510
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 231/371 (62%), Gaps = 3/371 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I GY + G M+ A LF M ERN SW+AM++GY G++ +A+ F+D M ++N+V+
Sbjct: 210 SMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQRNNVS 269
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-- 239
W+ MI+GY KCG+V A ++FD++ D + AM CY QN K A++++ M
Sbjct: 270 WMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDV 329
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
NV+ E+ + ISAC+QLGD+ + ++ + +++ AL+ +++KCG +D A
Sbjct: 330 NVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKA 389
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F ++ KD+++Y++MI +GK+ +A+ +F +M + I PN +TFIG+LTA +H
Sbjct: 390 YELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHA 449
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLVE+G F M + + + P +H MVDL GR+G+L++A LI AG WGA
Sbjct: 450 GLVEEGYHCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGA 508
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL AC++H N E GEIAA+H EL P+ TG +LL+NIYAS +W D + ++ + E
Sbjct: 509 LLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLSNIYASGERWDDVKRLRKVTKEKGF 568
Query: 480 KKSPGCSWISS 490
K PGCSW+ S
Sbjct: 569 SKIPGCSWMES 579
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 193/403 (47%), Gaps = 30/403 (7%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLS-----YARQVFDQIPK 64
S + Q KQVH+ +L H H L R + L N S Y V K
Sbjct: 14 SLSVKQAKQVHALILI-----HGLSHL-EPILARQILLSASNYSATVAQYVHSVLHH-SK 66
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI 124
F W IR H F+++ LY +M R G+ + F SS L ACAR+ +
Sbjct: 67 SPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGG-- 124
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
+ + Q+ S + +A+V Y G+M+ A++ +D M E+N V+W +
Sbjct: 125 -----LSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNS 179
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
M+AGY K G++ A++VFDEI + D W +M Y + G + A+ +++ M + N S
Sbjct: 180 MLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNF-AS 238
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
AM IS + GD++ A+ + R N +I +SKCG +D A F
Sbjct: 239 WNAM---ISGYVEFGDIDS----ARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFD 291
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE--GIEPNQVTFIGVLTACSHGGLV 362
++ KD++ +++MI +A + + +EAL +F M N ++P+++T V++ACS G +
Sbjct: 292 QVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDL 351
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
G E R GI+ T ++DL + G ++KA+ L
Sbjct: 352 RFG-PWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELF 393
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM--HRLGVLTSGFTFSS 108
++ A ++FDQ+ K L+ ++I + ++ ++++ L+ M + V T +S
Sbjct: 282 DVDSACELFDQVGG-KDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLAS 340
Query: 109 VLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERN 147
V++AC+++ L A++ Y K G +D A LF + +++
Sbjct: 341 VISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKD 400
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFD 203
+++++AM+ G G A + +D M + NS+T++ ++ Y G V E F
Sbjct: 401 LVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFT 460
Query: 204 EISE----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQL 258
+ + P + M + + G + A+E+ K M + + GA + AC
Sbjct: 461 SMKKYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQ----PHAGVWGALLLACRLH 516
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVS 283
+VE I A+H E D T Y S
Sbjct: 517 NNVEFGEIAAQHCFELEPDTTGYCS 541
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 256/483 (53%), Gaps = 21/483 (4%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNL-SYARQVFDQIPKCKTQFL 70
T N KQ+H+++ + H + L + LP + +Y +F Q+ FL
Sbjct: 23 TLNHAKQLHAHIYRN--NLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQV-HSPNPFL 79
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
+++LIR + + F SI LY M V FTFS++ + + PSL +
Sbjct: 80 YSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALF-SLLKNPSLGSQLHLHAFLF 138
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G ++D + + ++ Y G + A++ +D M ++ VTW +I Y
Sbjct: 139 GFVND------------LYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYA 186
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ G++ A ++F + D W +M Y QN K A++ ++ MR+ V E+ +VG
Sbjct: 187 RSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVG 246
Query: 251 AISACTQLGDVEMAAILAKHVDEGC---CDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
AISAC QLG V A + + E +V +ALI M+SKCG ++ A+ F +K
Sbjct: 247 AISACAQLG-VSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMK 305
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+V SYSSMI FA HG+++ A+ +F +M GI+PN VTF+G+ TACSH G+VE G +
Sbjct: 306 EMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQ 365
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F M +G+ P +H CM DLLGR+G LEKA L+ + G WGALLGA +H
Sbjct: 366 LFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIH 425
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N ++ EIA+R L EL P+ GN LL+ YA KW D V+ ++ E + +K+PGCSW
Sbjct: 426 GNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSW 485
Query: 488 ISS 490
+ +
Sbjct: 486 VEA 488
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 265/439 (60%), Gaps = 24/439 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR +FD++P + + W +I + + ++ L+ ++ V F ++
Sbjct: 231 LDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FAWT---- 281
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A++ G+ + G++D+A R+F+ M E+N +SW+AM+AGY ++ A+E +
Sbjct: 282 ----------AMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D+M +N+ +W M+ GY +CG + +AK +FDE+ + D WAAM Y Q+G ++ A+
Sbjct: 332 DQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALH 391
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL-AKHVDEGCCDRTNYVS-NALIHM 289
++ M+++ ++ A+ A+S+C ++ +E+ L + V G +T Y++ NAL+ M
Sbjct: 392 LFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF--QTGYIAGNALLAM 449
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG ++ A+ F I KD++S+++MI +A HG +EAL +F M+ I+P+ VT
Sbjct: 450 YGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTL 508
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL+ACSH G V+ G + F M + +GI +H TCM+DLLGR+G+L++A +L+
Sbjct: 509 VGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMP 568
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+ DA TWGALLGA ++H + ELGE AA + E+ P+ +G LL+N+YA+ G+W++
Sbjct: 569 FYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628
Query: 470 VKMMISETEKKKSPGCSWI 488
++ + + KK PG SW+
Sbjct: 629 MRSKMRDKGVKKVPGYSWV 647
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 155/315 (49%), Gaps = 19/315 (6%)
Query: 108 SVLNACARVPSLL-EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
SV N R ++ A+I GY D A+++F+ M +R++ISW+ M++GY GN+ A
Sbjct: 81 SVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSA 140
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A+ +++M EK+ V+W AM++G+ + G V EA+K+FD++ + W + YVQNG
Sbjct: 141 ARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRI 200
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A ++ + +S ++G +L D A+ + + R N +
Sbjct: 201 EDARRLFDSKMDWEI-VSWNCLMGGYVRKKRLDD-------ARSLFDRMPVRDKISWNIM 252
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I +++ G L A R F + +DV ++++M++ F +G EA +F +M E N+
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKNE 308
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
V++ ++ +E + F+ M T MV + G +++A ++
Sbjct: 309 VSWNAMIAGYVQSQQIEKARELFDQMP-----SRNTSSWNTMVTGYAQCGNIDQA-KILF 362
Query: 407 DYKDFCDAGTWGALL 421
D D +W A++
Sbjct: 363 DEMPQRDCISWAAMI 377
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 147/300 (49%), Gaps = 22/300 (7%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I Y + G + A +F+ M R+ ++++AM++GY + A++ +++M +++ ++W
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWN 126
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
M++GY K G + A+ +F+++ E D W AM + QNG+ + A +++ M +N
Sbjct: 127 VMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKN--- 183
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
E++ G +SA Q G +E A+ + + D N L+ + + LD A F
Sbjct: 184 -EISWNGLLSAYVQNGRIED----ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLF 238
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
R+ +D IS++ MIT +A +G EA +F ++ P + F G V+
Sbjct: 239 DRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMVS---GFVQ 289
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLG--RSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+G + TR+F P ++ + G +S Q+EKA L D + +W ++
Sbjct: 290 NG--MLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF-DQMPSRNTSSWNTMV 346
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 26/251 (10%)
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
E+K I + D W Y++ G ++A+ ++ MR+ + ++ AM+ +
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRST-VTYNAMISGYLSNN 105
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
+ A+ V E DR N ++ + K G L A F+++ KDV+S+++
Sbjct: 106 KFD-------CARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNA 158
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
M++ FA +G +EA +F +M + N++++ G+L+A G +ED R+F
Sbjct: 159 MLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA-------RRLF 207
Query: 377 GIKPLTEHLT--CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
K E ++ C++ R +L+ A SL D D +W ++ N L E
Sbjct: 208 DSKMDWEIVSWNCLMGGYVRKKRLDDARSLF-DRMPVRDKISWNIMITG--YAQNGLLSE 264
Query: 435 IAARHLLELGP 445
AR L E P
Sbjct: 265 --ARRLFEELP 273
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 230/371 (61%), Gaps = 3/371 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I GY + G M+ A LF M ERN SW+AM++G+ G++ +A+ F+D M +KN+V+
Sbjct: 210 SMISGYARAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVS 269
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-- 239
W+ MI+GY KCG+V A ++FD++ D + AM CY QN A+ ++ M
Sbjct: 270 WMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYV 329
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
NV+ E+ + ISAC+QLGD+ + ++ + +++ AL+ +++KCG +D A
Sbjct: 330 NVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKA 389
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F ++ KD+++Y++MI +GK+ +A+ +F +M + I PN +TFIG+LTA +H
Sbjct: 390 YELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHA 449
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLVE+G + F M + + + P +H MVDL GR+G+L++A LI AG WGA
Sbjct: 450 GLVEEGYRCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGA 508
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL AC++H N E GEIAA+H EL P+ TG +LL+NIYAS +W D + ++ + E
Sbjct: 509 LLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGF 568
Query: 480 KKSPGCSWISS 490
K PGCSW+ S
Sbjct: 569 SKIPGCSWMES 579
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 194/422 (45%), Gaps = 68/422 (16%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S + Q KQVH+ +L H + Q LI Y V K F
Sbjct: 14 SLSVKQAKQVHALIL-IHGLSHLEPILARQILISASNYSATVAQYVHSVLHH-SKSPDSF 71
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI----- 124
W IR H F+++ LY +M R G+ + F SS L ACAR+ + +
Sbjct: 72 SWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACARIAYRMGGISIHGQV 131
Query: 125 ------CG-------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
CG Y K+G M+ A+++FD MAERNV+SW++M+AGY G++
Sbjct: 132 QKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLV 191
Query: 166 AAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
A+ +D + +K+ ++W +MI+GY + G++ +A +F ++ E + + W AM +V+ G
Sbjct: 192 VAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERNFASWNAMISGHVEFGD 251
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
+A + M Q+N +S + M+ S C GDV+ A L
Sbjct: 252 IDSARSFFDAMPQKN-NVSWMTMISGYSKC---GDVDSACEL------------------ 289
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE--GIE 343
F ++ KD++ +++MI +A + + EAL++F M N ++
Sbjct: 290 -----------------FDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQ 332
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
P+++T V++ACS G + G E R GI+ T ++DL + G ++KA+
Sbjct: 333 PDEMTLASVISACSQLGDLRFG-PWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYE 391
Query: 404 LI 405
L
Sbjct: 392 LF 393
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR--LGVLTSGFTFSS 108
++ A ++FDQ+ K L+ ++I + ++ +++ L+ M + V T +S
Sbjct: 282 DVDSACELFDQVGG-KDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLAS 340
Query: 109 VLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERN 147
V++AC+++ L A++ Y K G +D A LF + +++
Sbjct: 341 VISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKD 400
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFD 203
+++++AM+ G G A + +D M + NS+T++ ++ Y G V E + F
Sbjct: 401 LVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFT 460
Query: 204 EISE----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQL 258
+ + P + M + + G + A+E+ K M + + GA + AC
Sbjct: 461 SMKKYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQ----PHAGVWGALLLACRLH 516
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVS 283
+VE I A+H E D T Y S
Sbjct: 517 NNVEFGEIAAQHCFELEPDTTGYRS 541
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 262/482 (54%), Gaps = 47/482 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
LS AR+VFD +P + WTS++R +V + ++ L+ M V++ +L
Sbjct: 102 LSEARRVFDTMPD-RNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQ 160
Query: 112 ACARVPSL--------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
RV + +I GY + G +D+A+ LFD M +RNV++W+AMV+G
Sbjct: 161 E-GRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSG 219
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY---------------------------- 189
YA G + A++ ++ M E+N V+W AM+ GY
Sbjct: 220 YARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMI 279
Query: 190 ---GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
G GEV +A++VF + E D W+AM Y + GY A+ +++ M++E + ++
Sbjct: 280 MGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFP 339
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+++ +S C L ++ + + D+ YV++ LI M+ KCG L A + F+R
Sbjct: 340 SLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRF 399
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
KDV+ ++SMIT ++ HG +EAL++F M + G+ P+ VTFIGVL+ACS+ G V++G
Sbjct: 400 PLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGL 459
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
+ FE M + ++P EH C+VDLLGR+ Q+ +A L+ DA WGALLGAC+
Sbjct: 460 ELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRT 519
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H+ +L E+A L +L P+ G LL+N+YA G+W+D E+++ I K PGCS
Sbjct: 520 HMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCS 579
Query: 487 WI 488
WI
Sbjct: 580 WI 581
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 156/338 (46%), Gaps = 58/338 (17%)
Query: 51 NLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
L +AR+VFD+ P +T W +++ + R+++LL+ KM + ++
Sbjct: 37 QLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVS-------- 88
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+I G+ K G++ +A+R+FD+M +RNV+SW++MV GY G++ A+
Sbjct: 89 ----------WNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAER 138
Query: 170 FYDRMTEKNSVTWVA-------------------------------MIAGYGKCGEVREA 198
+ M KN V+W MI GY + G + EA
Sbjct: 139 LFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEA 198
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+ +FDE+ + + W AM Y +NG A ++++VM + N EV+ + T
Sbjct: 199 RALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERN----EVSWTAMLLGYTHS 254
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G + A+ L + + V N +I G +D A R F +K +D ++S+MI
Sbjct: 255 GRMREASSLF----DAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMI 310
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
+ G EAL +F +M+ EG+ N + I VL+ C
Sbjct: 311 KVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVC 348
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 111/267 (41%), Gaps = 59/267 (22%)
Query: 186 IAGYGKCGEVREAKKVFDEISEP--DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
IA Y + G++ A+KVFDE P S W AM Y + + A+ +++ M Q N
Sbjct: 29 IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNT-- 86
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWRE 302
VS N LI H K G L A R
Sbjct: 87 --------------------------------------VSWNGLISGHIKNGMLSEARRV 108
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + +++V+S++SM+ + +G EA +F M ++ N V++ +L G V
Sbjct: 109 FDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHK----NVVSWTVMLGGLLQEGRV 164
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
+D K F++M + +T M+ G+L++A +L D + TW A++
Sbjct: 165 DDARKLFDMMPEKDVVA-----VTNMIGGYCEEGRLDEARALF-DEMPKRNVVTWTAMVS 218
Query: 423 ACKVHVNAELGEI-AARHLLELGPEKT 448
A G++ AR L E+ PE+
Sbjct: 219 G-----YARNGKVDVARKLFEVMPERN 240
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 236/397 (59%), Gaps = 30/397 (7%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+++ GYT+ G M + F+ MAER+V+SW+ MV G+ G++ ++ EF++++ N+V+
Sbjct: 63 SMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVS 122
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN- 240
WV M+ G+ + G++ EA+++FD++ + W AM YVQN + AI ++ M ++N
Sbjct: 123 WVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNS 182
Query: 241 ----------VRISEV-------------------AMVGAISACTQLGDVEMAAILAKHV 271
VR+ ++ +S+C L +++ L + V
Sbjct: 183 ISWTTVINGYVRMGKLDEARQLLNQMPYRNKPDQSTFACGLSSCAHLAALQVGKQLHQLV 242
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+ +VSNALI M++KCG + A F I + DV+S++S+I A+A +G +EAL
Sbjct: 243 MKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREAL 302
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
+F KM EG+ P++VTF+G+L+ACSH GL++ G K F+ M + + I+PL EH CMVDL
Sbjct: 303 KLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDL 362
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
LGR+G+LE+A L+ K +AG WGALLGAC++H N EL + AA LLE P KT N
Sbjct: 363 LGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNY 422
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+N+ A G+W + V+ ++ E +K PG SWI
Sbjct: 423 VLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWI 459
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 149/312 (47%), Gaps = 16/312 (5%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAER-NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+I YT+ G + A+ LF+ + + N + +AMVAGYA A+ +D M K+ V+
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS 60
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +M+ GY + GE+R + F+E++E D W M +V+ G ++ E ++ + N
Sbjct: 61 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNT 120
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+S V M+ + ++ + A+ + + R NA+I + + ++D A
Sbjct: 121 -VSWVTMLCGFARFGKIAE-------ARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAIS 172
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM--RNEGIEPNQVTFIGVLTACSHG 359
F + K+ IS++++I + GK EA + +M RN +P+Q TF L++C+H
Sbjct: 173 LFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN---KPDQSTFACGLSSCAHL 229
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
++ G KQ + G ++ + + G + A L D F D +W +
Sbjct: 230 AALQVG-KQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHF-DVVSWNS 287
Query: 420 LLGACKVHVNAE 431
L+ A ++ N
Sbjct: 288 LIAAYALNGNGR 299
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 157/440 (35%), Positives = 258/440 (58%), Gaps = 21/440 (4%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D + AR+ FD++P+ + WTS+I +V ++ +L+ M
Sbjct: 181 DRVDIARKFFDRMPE-RNVVSWTSMICGYVKAGDMAEAQVLFDSMP-------------- 225
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+ + ++ GY IG +A+ +F M + SW+ M++G+ G +++AK+
Sbjct: 226 ----VKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKD 281
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
F+DRM KN ++W M+ GY K G+ A+ +FD++ + W+ M Y +NG A
Sbjct: 282 FFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKA 341
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIH 288
+E+++ ++++++ E ++G ISAC+QLG ++ A +I+ +V V +LI
Sbjct: 342 LELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLR-VFTSLID 400
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M++KCG ++ A + F KD++ YS+MI A A+HG ++A+ +F KM+ I+P+ VT
Sbjct: 401 MYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVT 460
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+GVLTAC+HGGLV++G K F+ MT FGI+P +H C+VDLLGR G LE+A++LI +
Sbjct: 461 FLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNM 520
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+ WGALL AC+VH N +L E+AA L ++ P+ +GN LL+NIYA+ G+W
Sbjct: 521 PIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVA 580
Query: 469 IVKMMISETEKKKSPGCSWI 488
V+ I E +K+ G SWI
Sbjct: 581 KVRAKIREHRVRKNRGSSWI 600
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 209/421 (49%), Gaps = 40/421 (9%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
+++ KT LK +H+ LL + ++ L+RL G YA +VFD+I +
Sbjct: 7 HIIHNCKTLKSLKSIHARLLIESSVASSEF--VINKLLRLYSRFGAT-DYAHKVFDEITQ 63
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL--EA 122
+LWTSLI +V + + ++ L+ +M R + FT SSVL A AR+ +A
Sbjct: 64 -PNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQA 122
Query: 123 VICGYTKIGL-------------------MDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
V K G +D A++ FD M E++++SW+ M++GY N
Sbjct: 123 VYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDR 182
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+ A++F+DRM E+N V+W +MI GY K G++ EA+ +FD + D + W M Y+
Sbjct: 183 VDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDI 242
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G A ++ M + + IS + G++E A + N +S
Sbjct: 243 GDCVNARIIFGKMPIHDTGSWNI----MISGFCKAGELESAKDFFDRMPN-----KNVIS 293
Query: 284 -NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
++ + K G + A F ++ K+++++S+MI +A +G+ +AL++F + + + I
Sbjct: 294 WGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDI 353
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH--LTCMVDLLGRSGQLEK 400
+P++ +G+++ACS G+++ ++ G L++ T ++D+ + G +EK
Sbjct: 354 KPDETFILGIISACSQLGIID---AAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEK 410
Query: 401 A 401
A
Sbjct: 411 A 411
>gi|226496045|ref|NP_001146017.1| uncharacterized protein LOC100279548 [Zea mays]
gi|219885333|gb|ACL53041.1| unknown [Zea mays]
gi|414872421|tpg|DAA50978.1| TPA: hypothetical protein ZEAMMB73_118572 [Zea mays]
Length = 528
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 225/370 (60%), Gaps = 2/370 (0%)
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+++ G K G +D+A +FD M E NV SW+A+V+G+ G++ A+E ++RM +N+V
Sbjct: 156 NSMVAGLAKAGHLDEAIEMFDQMPETNVASWNALVSGFMAQGHLAQAQELFERMPTRNNV 215
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+W+ MI+GY K G+V+ A +FD + D W AM CY QNG A+ A+ ++ M + +
Sbjct: 216 SWITMISGYAKAGDVQAAANLFDRMGSKDLYAWNAMISCYAQNGCAREALGIFNRMLKPH 275
Query: 241 VRI--SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+ + +E ISAC+QLGD+ + + D +++ AL+ +++K G +D
Sbjct: 276 IWVVPNEKTFSSVISACSQLGDLRFGLWVENFMGYVGVDLDDHLRTALVDLYTKSGRMDR 335
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A+ F ++++DV+SYS+MI HGK EA+ +F +M I+PN VTF+G+L+A SH
Sbjct: 336 AFDLFRGLRSRDVVSYSAMIVGCGMHGKLNEAVGLFKEMSKARIDPNAVTFVGLLSAYSH 395
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL+E+ F MT + I P EH T MVD+LGR G+LE+A L+M DA WG
Sbjct: 396 AGLLEEARACFTSMTSRYRINPSMEHYTIMVDILGRCGKLEEAFQLVMQIPVCPDASVWG 455
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALL AC++H N ELGE+ A EL P+++G LL NIYA KW + ++ M++E
Sbjct: 456 ALLLACRLHNNIELGEVVASKCFELEPQESGYYILLGNIYAQAKKWDKVKGLRKMMAERG 515
Query: 479 KKKSPGCSWI 488
K+PG SW+
Sbjct: 516 LSKTPGSSWV 525
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 272/482 (56%), Gaps = 20/482 (4%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL-PGDNLSYARQVFDQIPKCKTQF 69
KT L Q+H+ +T+T ++ A ++ L P ++ YAR +F +I K F
Sbjct: 46 KTLKDLTQIHA---QTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDI-F 101
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGF-TFSSVLNACARVPSLL--EAVICG 126
+ +LIR + + +++ Y++M V+ TF +L AC+ +PSL EA+
Sbjct: 102 IANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSH 161
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
K+G + V + +V YA+CG +++A +DR E + +W MI
Sbjct: 162 VFKLGWSSE------------VSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMI 209
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
GY KCG + A+++F+ + + D W+ M YVQ K + +++ M E + +E
Sbjct: 210 GGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNES 269
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+V A+SAC LG +E + ++++ T + ALI M+SKCG ++ A F ++
Sbjct: 270 VLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKM 329
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
K K+V+++S+MI A +G+ ++AL++F +M +G++PN+VTFIG+L ACSH LV++GC
Sbjct: 330 KEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGC 389
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
F MT ++G+KP H CMVDL GR+G L++A ++I ++ WGALL AC++
Sbjct: 390 SFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRI 449
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H + ELGE + LLEL P G LL+NIYA+ G+W ++ M+ E + K+PGCS
Sbjct: 450 HGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCS 509
Query: 487 WI 488
+I
Sbjct: 510 FI 511
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 276/515 (53%), Gaps = 44/515 (8%)
Query: 3 SKYLVPRSKTFNQLKQVHSY--------LLKTLTKPHDQYHYYAQFL-----IRLLQLP- 48
S + +P+S NQ+ V LL+ P + +AQ + + +L L
Sbjct: 6 SSFPIPQSPNRNQIHHVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTR 65
Query: 49 -------GDNLSYARQVFDQIPKCKTQ-FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
+ YA+Q+F+ + K K + F+W S ++ +I+L+ ++ + V
Sbjct: 66 VGLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVC 125
Query: 101 TSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQ-RLFDSMAER-----NVISWSAM 154
FT SSVL AC + L+D + R+ + E+ N+ + +
Sbjct: 126 PDTFTCSSVLRAC----------------LNLLDLSNGRILHGVVEKVGFRSNLYLQNMI 169
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
V YA+CG M A+ +++M +++ VTW MIA K G+ A +F + E + W
Sbjct: 170 VHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWT 229
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
+M YVQ G AK AI ++ M + V+ +EV +V ++AC LG +++ + ++ +
Sbjct: 230 SMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRH 289
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
R +SN LI M+ KCG L+ A + F ++ + V+S+S+MI A HG+++EAL +F
Sbjct: 290 GFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLF 349
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
M GIEPN VTFIG+L ACSH GL+ +G + F MTR +GI P EH CMVDLL R
Sbjct: 350 SDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSR 409
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+G L +AH I++ + WGALLGAC+VH N E+ E A +HLLEL P G +L
Sbjct: 410 AGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVL 469
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
+NIYA G+W+D+ V+ + + + KK+PG S I+
Sbjct: 470 SNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSIT 504
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 270/518 (52%), Gaps = 34/518 (6%)
Query: 1 MTSKYLVPRSKTF-------NQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLP--GDN 51
M+S + P +F ++L Q H+++LK+ + A LI +
Sbjct: 1 MSSSFPPPPILSFAEMATSISELHQAHAHILKSGLI---HSTFAASRLIASVSTNSHAQA 57
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ YA +F +IP ++W ++IR + ++ ++ +M VL +TF+ L
Sbjct: 58 IPYAHSIFSRIPN-PNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALK 116
Query: 112 ACARVPSLLEA---------------------VICGYTKIGLMDDAQRLFDSMAERNVIS 150
+C + E +I Y G ++DA+ L D M ER+V+S
Sbjct: 117 SCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVS 176
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
W+A+++ YA G M+ A +D MTE+N +W MI+GY G + EA++VF E +
Sbjct: 177 WNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNV 236
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W AM Y G + +++ M+ V+ +V +SAC +G + + +
Sbjct: 237 VSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAY 296
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+D+ +V+ AL+ M+SKCG ++ A F+ KD+ +++S+I+ + HG Q A
Sbjct: 297 IDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHA 356
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
L +F +M EG +PN+VTF+ VL+ACS GL+++G + F LM V GI+P EH CMVD
Sbjct: 357 LQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVD 416
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGN 450
LLGR G LE+A L+ + W +LLGAC+ H N EL E A+ LLEL P+++ +
Sbjct: 417 LLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSS 476
Query: 451 SALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+N+YASMG+WKD V+ + +K PGCS I
Sbjct: 477 FVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMI 514
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 259/492 (52%), Gaps = 44/492 (8%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-- 98
LI L L L A IP + +TSL+R +V H +I L+ +M
Sbjct: 85 LISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQMPERNHI 144
Query: 99 ---VLTSGFTFSSVLNACARVPSLLEA--------VICGYTKIGLMDDAQRLFDSMAERN 147
VL GF + ++ ++ + A ++ GY ++G +D+A+ LFD M +RN
Sbjct: 145 SYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTLFDEMPKRN 204
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM---------------------- 185
V+SW+AMV+GYA G + A++ ++ M E+N V+W AM
Sbjct: 205 VVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAEELFNAMPD 264
Query: 186 ---------IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
I G+G+ G V AK VFD + E D W+A+ Y QN + A+ ++ M
Sbjct: 265 HPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEALSTFREM 324
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+R + +++ ++ C L ++ + + D Y +ALI M+ KCG L
Sbjct: 325 LHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNL 384
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
D A R F + KDV+ ++SMIT +A HG +EAL +F MR G+ P+ +T+IG LTAC
Sbjct: 385 DKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITYIGALTAC 444
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
S+ G V++G F M GIKP EH CMVDLLGR+G +++A LI DA
Sbjct: 445 SYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVI 504
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
WGAL+GAC++H NAE+ EI+A+ LLEL P G LL++IY S G+W+D+ ++ IS
Sbjct: 505 WGALMGACRMHKNAEIAEISAKKLLELEPGNAGPYVLLSHIYTSSGRWEDASNMRKFISS 564
Query: 477 TEKKKSPGCSWI 488
KS GCSWI
Sbjct: 565 RHLNKSLGCSWI 576
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 186/392 (47%), Gaps = 26/392 (6%)
Query: 51 NLSYARQVFDQIPKCKT---QFLWTSLIRNHVLHAHFRQSILLYAK-MHRLGVLTSGFTF 106
N+ AR F+ +P T L RNH+ A R + + + L SG +
Sbjct: 32 NMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPTRDLASYNALISGLSL 91
Query: 107 --------SSVLNACARVPSLLE--AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
++ L PS++ +++ GY + GL+ DA +LF M ERN IS++ ++
Sbjct: 92 RRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQMPERNHISYTVLLG 151
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
G+ + G + A++ +D M K+ V W AM++GY + G V EA+ +FDE+ + + W AM
Sbjct: 152 GFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTLFDEMPKRNVVSWTAM 211
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y QNG A ++++VM + N EV+ + Q G +E A+ +
Sbjct: 212 VSGYAQNGQVNLARKLFEVMPERN----EVSWTAMLFGYIQAGRIED----AEELFNAMP 263
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
D N +I + G +D A F R+ +D ++S++I A+ + EAL F +
Sbjct: 264 DHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEALSTFRE 323
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCK-QFELMTRVFGIKPLTEHLTCMVDLLGRS 395
M + GI PN + I +LT C+ +++ G + ++ R F + ++ ++ + +
Sbjct: 324 MLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYA--VSALITMYIKC 381
Query: 396 GQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
G L+KA + ++ D W +++ H
Sbjct: 382 GNLDKAKRVFHMFEP-KDVVMWNSMITGYAQH 412
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 147/320 (45%), Gaps = 32/320 (10%)
Query: 108 SVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
+V++A AR+ L + G M+ A+ F++M R S++A++AGY AA
Sbjct: 16 AVVDANARIARL--------ARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAA 67
Query: 168 KEFYDRMTEKNSVTWVAMIAGYG-KCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGY 225
+ RM ++ ++ A+I+G + + +A I P + ++ YV++G
Sbjct: 68 LRVFHRMPTRDLASYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGL 127
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
AI++++ M + N IS ++G ++ + A+ + + + A
Sbjct: 128 LADAIQLFRQMPERN-HISYTVLLGGFLDAGRVDE-------ARKLFDEMPAKDVVAWTA 179
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
++ + + G +D A F + ++V+S+++M++ +A +G+ A +F M E N
Sbjct: 180 MLSGYCQVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMP----ERN 235
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+V++ +L G +ED + F M PL M+ G+ G ++ A S+
Sbjct: 236 EVSWTAMLFGYIQAGRIEDAEELFNAMPD----HPLAA-CNGMIVGFGQQGMVDAAKSV- 289
Query: 406 MDYKDFC--DAGTWGALLGA 423
+ C D GTW A++ A
Sbjct: 290 --FDRMCERDDGTWSAIIKA 307
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 171/501 (34%), Positives = 271/501 (54%), Gaps = 26/501 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
K+ KQ+H+ +LK L D + + L D+L YA ++F P F+
Sbjct: 16 KSLTTFKQIHANVLK-LGLESDPF-IAGKLLHHCAISLSDSLDYACRLFRYTPNPDV-FM 72
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSVLNACARVPSL-------LEA 122
+LIR + S+L + +M R F+F+ ++ A A + S+ +A
Sbjct: 73 HNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQA 132
Query: 123 VICG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
++ G Y + G + A+++FD M E N I+W+AMV G+MK +
Sbjct: 133 LVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGR 192
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
E +D M +N ++W M+AGY K GE+ A+++F E+ D W+ M V + NGY +
Sbjct: 193 ELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEE 252
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A ++ ++++ +R +E ++ G +SAC Q G +E IL +++ V+NAL+
Sbjct: 253 AFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLD 312
Query: 289 MHSKCGYLDLAWREFSRIKN-KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
+SKCG + +A F RI N ++++S++SM+ A A HG +EA+ +F KM GI P+++
Sbjct: 313 TYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEI 372
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
FI +L ACSH GLVE GC+ F+ M ++ I+P EH CMVDL GR+GQL+KA+ +
Sbjct: 373 AFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQ 432
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
C A W LLGAC +H + +L E L EL P + + LL+N YA GKWKD+
Sbjct: 433 MPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDA 492
Query: 468 EIVKMMISETEKKKSPGCSWI 488
V+ ++E K+PG S I
Sbjct: 493 ASVRRSMTEQRITKTPGWSMI 513
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 253/437 (57%), Gaps = 19/437 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR +FD++P + W ++I + Q+ L+ + V T
Sbjct: 220 LGDARWLFDKMP-VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFT---------- 268
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A++ GY + G++D+A+ FD M E+N +S++AM+AGY M A+E +
Sbjct: 269 --------WTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELF 320
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M +N +W MI GYG+ G++ +A+K FD + + D WAA+ Y Q+G+ + A+
Sbjct: 321 ESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALN 380
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
M+ ++Q+ ++ A+S C + +E+ + + +V NAL+ M+
Sbjct: 381 MFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYF 440
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG +D A F I+ KDV+S+++M+ +A HG ++AL +F M+ G++P+++T +G
Sbjct: 441 KCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVG 500
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+ACSH GL++ G + F MT+ +G+ P ++H TCM+DLLGR+G+LE+A LI +
Sbjct: 501 VLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ 560
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
A +WGALLGA ++H N ELGE AA + ++ P+ +G LL+N+YA+ G+W D++ ++
Sbjct: 561 PGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMR 620
Query: 472 MMISETEKKKSPGCSWI 488
+ + +K PG SW+
Sbjct: 621 SKMRDIGVQKVPGYSWV 637
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 150/318 (47%), Gaps = 23/318 (7%)
Query: 109 VLNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
V N R S+ A+I GY + + A+ LFD M ER++ SW+ M+ GY + A
Sbjct: 71 VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDA 130
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+ +D M EK+ V+W ++++GY + G V EA++VFD + E ++ W + YV NG +
Sbjct: 131 RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIE 190
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A +++ ++ IS ++G +LGD A+ + + R N +I
Sbjct: 191 EACLLFESKSDWDL-ISWNCLMGGFVRKKKLGD-------ARWLFDKMPVRDAISWNTMI 242
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
+++ G L A R F +DV ++++M++ + +G EA F +E E N+V
Sbjct: 243 SGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFF----DEMPEKNEV 298
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL--TEHLTCMVDLLGRSGQLEKAHSLI 405
++ ++ G V+ K+ ++ +F P M+ G+ G + +A
Sbjct: 299 SYNAMIA-----GYVQ--TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF 351
Query: 406 MDYKDFCDAGTWGALLGA 423
D D +W A++
Sbjct: 352 -DMMPQRDCVSWAAIIAG 368
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 17/94 (18%)
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GL++ G + F M + + P ++H TCM+DLLGR +LE+ GA
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE-----------------GA 820
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
LLGA ++H N ELGE AA+ ++GP+ +G S +
Sbjct: 821 LLGASRIHGNTELGEKAAQMFFKMGPQNSGISKM 854
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 114/257 (44%), Gaps = 43/257 (16%)
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK--------------- 191
+++ W+ ++ + G+ +A ++ M ++SV++ AMI+GY +
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 192 -----------CGEVR-----EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKV 235
G VR +A+++FD + E D W ++ Y QNGY A E++
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 236 MRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
M ++N ++ G ++A G +E A +L + + N + + K G
Sbjct: 168 MPEKN----SISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVR-KKKLG- 221
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
D W F ++ +D IS+++MI+ +A G +A +F +E + T+ +++
Sbjct: 222 -DARWL-FDKMPVRDAISWNTMISGYAQGGGLSQARRLF----DESPTRDVFTWTAMVSG 275
Query: 356 CSHGGLVEDGCKQFELM 372
G++++ F+ M
Sbjct: 276 YVQNGMLDEAKTFFDEM 292
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 43/198 (21%)
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
R+ + + + W I+ + + G A VF+ + + + AM Y++N A +
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M + ++ V + G + C +LGD
Sbjct: 103 FDQMPERDLFSWNVMLTGYVRNC-RLGD-------------------------------- 129
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
A R F + KDV+S++S+++ +A +G EA ++F M E N +++ G+
Sbjct: 130 ------ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGL 179
Query: 353 LTACSHGGLVEDGCKQFE 370
L A H G +E+ C FE
Sbjct: 180 LAAYVHNGRIEEACLLFE 197
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 253/437 (57%), Gaps = 19/437 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR +FD++P + W ++I + Q+ L+ + V T
Sbjct: 220 LGDARWLFDKMP-VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFT---------- 268
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A++ GY + G++D+A+ FD M E+N +S++AM+AGY M A+E +
Sbjct: 269 --------WTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELF 320
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M +N +W MI GYG+ G++ +A+K FD + + D WAA+ Y Q+G+ + A+
Sbjct: 321 ESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALN 380
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
M+ ++Q+ ++ A+S C + +E+ + + +V NAL+ M+
Sbjct: 381 MFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYF 440
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG +D A F I+ KDV+S+++M+ +A HG ++AL +F M+ G++P+++T +G
Sbjct: 441 KCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVG 500
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+ACSH GL++ G + F MT+ +G+ P ++H TCM+DLLGR+G+LE+A LI +
Sbjct: 501 VLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ 560
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
A +WGALLGA ++H N ELGE AA + ++ P+ +G LL+N+YA+ G+W D++ ++
Sbjct: 561 PGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMR 620
Query: 472 MMISETEKKKSPGCSWI 488
+ + +K PG SW+
Sbjct: 621 SKMRDIGVQKVPGYSWV 637
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 150/318 (47%), Gaps = 23/318 (7%)
Query: 109 VLNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
V N R S+ A+I GY + + A+ LFD M ER++ SW+ M+ GY + A
Sbjct: 71 VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDA 130
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+ +D M EK+ V+W ++++GY + G V EA++VFD + E ++ W + YV NG +
Sbjct: 131 RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIE 190
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A +++ ++ IS ++G +LGD A+ + + R N +I
Sbjct: 191 EACLLFESKSDWDL-ISWNCLMGGFVRKKKLGD-------ARWLFDKMPVRDAISWNTMI 242
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
+++ G L A R F +DV ++++M++ + +G EA F +E E N+V
Sbjct: 243 SGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFF----DEMPEKNEV 298
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL--TEHLTCMVDLLGRSGQLEKAHSLI 405
++ ++ G V+ K+ ++ +F P M+ G+ G + +A
Sbjct: 299 SYNAMIA-----GYVQ--TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF 351
Query: 406 MDYKDFCDAGTWGALLGA 423
D D +W A++
Sbjct: 352 -DMMPQRDCVSWAAIIAG 368
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 114/257 (44%), Gaps = 43/257 (16%)
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK--------------- 191
+++ W+ ++ + G+ +A ++ M ++SV++ AMI+GY +
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 192 -----------CGEVR-----EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKV 235
G VR +A+++FD + E D W ++ Y QNGY A E++
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 236 MRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
M ++N ++ G ++A G +E A +L + + N + + K G
Sbjct: 168 MPEKN----SISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVR-KKKLG- 221
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
D W F ++ +D IS+++MI+ +A G +A +F +E + T+ +++
Sbjct: 222 -DARWL-FDKMPVRDAISWNTMISGYAQGGGLSQARRLF----DESPTRDVFTWTAMVSG 275
Query: 356 CSHGGLVEDGCKQFELM 372
G++++ F+ M
Sbjct: 276 YVQNGMLDEAKTFFDEM 292
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 82/198 (41%), Gaps = 43/198 (21%)
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
R+ + + + W I+ + + G A VF+ + + + AM Y++N A +
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M + ++ V + G + C +LGD
Sbjct: 103 FDQMPERDLFSWNVMLTGYVRNC-RLGD-------------------------------- 129
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
A R F + KDV+S++S+++ +A +G EA ++F M E N +++ G+
Sbjct: 130 ------ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGL 179
Query: 353 LTACSHGGLVEDGCKQFE 370
L A H G +E+ C FE
Sbjct: 180 LAAYVHNGRIEEACLLFE 197
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 275/515 (53%), Gaps = 44/515 (8%)
Query: 3 SKYLVPRSKTFNQLKQVHSY--------LLKTLTKPHDQYHYYAQFL-----IRLLQLP- 48
S + +P+S NQ+ V LL+ P + +AQ + + +L L
Sbjct: 6 SSFPIPQSPNRNQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTR 65
Query: 49 -------GDNLSYARQVFDQIPKCKTQ-FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
+ YA+Q+F + K K + F+W S ++ +I+L+ ++ + V
Sbjct: 66 VGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVC 125
Query: 101 TSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQ-RLFDSMAER-----NVISWSAM 154
FT SSVL AC + L+D + R+ + E+ N+ + +
Sbjct: 126 PDTFTCSSVLRAC----------------LNLLDLSNGRILHGVVEKVGFRSNLYLQNMI 169
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
V YA+CG M A+ +++M +++ VTW MIA K G+ A +F + E + W
Sbjct: 170 VHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWT 229
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
+M YVQ G AK AI ++ M + V+ +EV +V ++AC LG +++ + ++ +
Sbjct: 230 SMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRH 289
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
R +SN LI M+ KCG L+ A + F ++ + V+S+S+MI A HG+++EAL +F
Sbjct: 290 GFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLF 349
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
M GIEPN VTFIG+L ACSH GL+ +G + F MTR +GI P EH CMVDLL R
Sbjct: 350 SDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSR 409
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+G L +AH I++ + WGALLGAC+VH N E+ E A +HLLEL P G +L
Sbjct: 410 AGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVL 469
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
+NIYA G+W+D+ V+ + + + KK+PG S I+
Sbjct: 470 SNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSIT 504
>gi|296082839|emb|CBI22140.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 230/371 (61%), Gaps = 3/371 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+++ GY K G M+ A LF M ERN SW+AM++G+ G++ +A+ F+D M +KN+V+
Sbjct: 58 SMLAGYLKAGDMEKASSLFQQMPERNFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVS 117
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-- 239
W+ MI+GY KCG+V A ++FD++ D + AM CY QN A+ ++ M
Sbjct: 118 WMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYV 177
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
NV+ E+ + ISAC+QLGD+ + ++ + +++ AL+ +++KCG +D A
Sbjct: 178 NVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKA 237
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F ++ KD+++Y++MI +GK+ +A+ +F +M + I PN +TFIG+LTA +H
Sbjct: 238 YELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHA 297
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLVE+G + F M + + + P +H MVDL GR+G+L++A LI AG WGA
Sbjct: 298 GLVEEGYRCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGA 356
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL AC++H N E GEIAA+H EL P+ TG +LL+NIYAS +W D + ++ + E
Sbjct: 357 LLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKRLRKVTKEKGF 416
Query: 480 KKSPGCSWISS 490
K PGCSW+ S
Sbjct: 417 SKIPGCSWMES 427
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 42/256 (16%)
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
+A+V Y G+M+ A++ +D M E+N V+W +M+AGY K G++ +A +F ++ E + +
Sbjct: 26 TALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKAGDMEKASSLFQQMPERNFA 85
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W AM +V+ G +A + M Q+N +S + M+ S C GDV+ A L
Sbjct: 86 SWNAMISGHVEFGDIDSARSFFDAMPQKN-NVSWMTMISGYSKC---GDVDSACEL---- 137
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
F ++ KD++ +++MI +A + + EAL
Sbjct: 138 -------------------------------FDQVGGKDLLLFNAMIACYAQNSRPNEAL 166
Query: 332 DMFLKMRNE--GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
++F M N ++P+++T V++ACS G + G E R GI+ T ++
Sbjct: 167 NLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFG-PWIESYMRRLGIEMDGHLATALL 225
Query: 390 DLLGRSGQLEKAHSLI 405
DL + G ++KA+ L
Sbjct: 226 DLYAKCGSIDKAYELF 241
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR--LGVLTSGFTFSS 108
++ A ++FDQ+ K L+ ++I + ++ +++ L+ M + V T +S
Sbjct: 130 DVDSACELFDQVGG-KDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLAS 188
Query: 109 VLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERN 147
V++AC+++ L A++ Y K G +D A LF + +++
Sbjct: 189 VISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKD 248
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFD 203
+++++AM+ G G A + +D M + NS+T++ ++ Y G V E + F
Sbjct: 249 LVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFT 308
Query: 204 EISE----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQL 258
+ + P + M + + G + A+E+ K M + + GA + AC
Sbjct: 309 SMKKYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQ----PHAGVWGALLLACRLH 364
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVS 283
+VE I A+H E D T Y S
Sbjct: 365 NNVEFGEIAAQHCFELEPDTTGYRS 389
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 34/213 (15%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
YV AL+ + K G +++A + F + ++V+S++SM+ + G ++A +F +M
Sbjct: 23 YVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKAGDMEKASSLFQQMPER 82
Query: 341 GI---------------------------EPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
+ N V+++ +++ S G V+ C EL
Sbjct: 83 NFASWNAMISGHVEFGDIDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSAC---ELFD 139
Query: 374 RVFGIKPL--TEHLTCMVDLLGRSGQLEKAHSLIMDYKDF-CDAGTWGALLGACKVHVNA 430
+V G L + C + L ++++ Y + D T +++ AC +
Sbjct: 140 QVGGKDLLLFNAMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDL 199
Query: 431 ELGEIAARHLLELGPEKTGNSAL-LANIYASMG 462
G ++ LG E G+ A L ++YA G
Sbjct: 200 RFGPWIESYMRRLGIEMDGHLATALLDLYAKCG 232
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 257/461 (55%), Gaps = 23/461 (4%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + YA + Q+ + F++ ++I+ V Q++ LY +M R V + +TF S+
Sbjct: 28 NRMDYAVLAYTQM-EIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVSPTSYTFPSL 86
Query: 110 LNACARVPSL--LEAV-------------------ICGYTKIGLMDDAQRLFDSMAERNV 148
+ AC V L EAV + Y+ +G ++++ R+FD M ER+V
Sbjct: 87 IKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDV 146
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP 208
+W+ MV+G G+M +A +D M ++N TW +I GY + EV A+ +F+++
Sbjct: 147 FAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPAR 206
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
D W M CY QN + A+ ++ M + + EV M ISAC LG +++ +
Sbjct: 207 DIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIH 266
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
++ + + Y+ +ALI M++KCG LD + F +++ K++ ++S+I A HG ++
Sbjct: 267 YYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAE 326
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
EAL MF KM E I+PN VTF+ VL+AC+H GL+E+G K+F MTR I P EH CM
Sbjct: 327 EALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCM 386
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKT 448
VDLL ++G LE+A LI K +A WGALL CK+H N E+ ++AA L+ L P +
Sbjct: 387 VDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNS 446
Query: 449 GNSALLANIYASMGKWKDSEIVKMMISETE-KKKSPGCSWI 488
G LL N+ A + +W ++ +++ + E +K+ PG SWI
Sbjct: 447 GYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWI 487
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/435 (38%), Positives = 246/435 (56%), Gaps = 39/435 (8%)
Query: 88 ILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERN 147
I +A + +LG + F ++V++ AR + A++ GY K AQ LFD M ERN
Sbjct: 45 IGFHAHVLKLGHGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERN 104
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEK------------------------------ 177
VI+W+AMV GYA +++AA+ ++D M E+
Sbjct: 105 VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLG 164
Query: 178 ---NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
NSVTW AMI+ Y + G++ A+K+F+ + + W +M Y QNG + AIE++K
Sbjct: 165 AYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFK 224
Query: 235 VM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M + + EV MV ISAC LG +E+ + + + E + NA+I M+S+C
Sbjct: 225 EMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRC 284
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G ++ A R F + +DV+SY+++I+ FA HG EA+++ M+ GIEP++VTFIGVL
Sbjct: 285 GSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVL 344
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
TACSH GL+E+G K FE + P +H CMVDLLGR G+LE A +
Sbjct: 345 TACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPH 399
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
AG +G+LL A ++H ELGE+AA L EL P+ +GN LL+NIYAS G+WKD E ++
Sbjct: 400 AGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREA 459
Query: 474 ISETEKKKSPGCSWI 488
+ + KK+ G SW+
Sbjct: 460 MKKGGVKKTTGWSWV 474
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 40/253 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A++VF ++ + + +LI H H ++I L + M G+ TF VL AC+
Sbjct: 290 AKRVFQEMA-TRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS 348
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
GL+++ +++F+S+ + + ++ MV G ++ AK +RM
Sbjct: 349 HA--------------GLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRTMERM 394
Query: 175 TEK------NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+ S+ + I + GE+ A K+F+ EPD S + N YA A
Sbjct: 395 PMEPHAGVYGSLLNASRIHKQVELGEL-AANKLFE--LEPDNSG----NFILLSNIYASA 447
Query: 229 AIEMYKVMRQENV-RISEVAMVGAISACTQLGDVEMAAILAKH-VDEGCCDRTNYVSNAL 286
R ++V RI E G + T VE L K V + +R++ + L
Sbjct: 448 G-------RWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLL 500
Query: 287 IHMHSK---CGYL 296
I + K GY+
Sbjct: 501 IELRKKMREAGYI 513
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 263/481 (54%), Gaps = 45/481 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-----SGFTF 106
+S AR+VFD++P+ + WTS++R +V ++ LL+ +M V++ G
Sbjct: 94 ISEARKVFDKMPE-RNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIE 152
Query: 107 SSVLNACARVPSLLEA--------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
++ R+ ++ +I G G + +A+ +FD M +RNV++W++M++GY
Sbjct: 153 DGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGY 212
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY----------------------------- 189
A + A++ ++ M +KN VTW AM+ GY
Sbjct: 213 AMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIM 272
Query: 190 --GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
G GEV +A+ VFD++ E D W+A+ Y + G+ A+ ++ +M++E VR + +
Sbjct: 273 GFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPS 332
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++ +S C L ++ + + D YVS+ LI M+ KCG L R F R
Sbjct: 333 IISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFS 392
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+KD++ ++S+I +A HG ++AL++F +M + G P+++TFIGVL+AC + G V++G +
Sbjct: 393 SKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLE 452
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
FE M + + TEH CMVDLLGR+G+L +A +LI + DA WGALL AC+ H
Sbjct: 453 IFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTH 512
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N +L EIAA+ LL+L P G LL+N+YAS +WKD ++ + KSPGCSW
Sbjct: 513 KNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSW 572
Query: 488 I 488
I
Sbjct: 573 I 573
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 162/326 (49%), Gaps = 27/326 (8%)
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
RL S F+ S+ + C I + ++G +D A+ +FD + + V SW+A+V
Sbjct: 4 RLIPYRSYFSSSAAITQCQ---------ISYFARLGQIDRARNIFDDLQSKTVTSWNAIV 54
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
AGY + A++ +D+M E+N+++W +++GY K G + EA+KVFD++ E + W +
Sbjct: 55 AGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTS 114
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
M YVQ G A ++ M ++NV +S M+G + + G V+ A L +
Sbjct: 115 MVRGYVQEGLIDEAELLFWRMPEKNV-VSWTVMLGGL---IEDGRVDEARRLFDMIPV-- 168
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
+ S +I G L A F + ++V++++SMI+ +A + K A +F
Sbjct: 169 --KDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFE 226
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRS 395
M ++ N+VT+ +L + G + + + F+ M +KP+ M+ G +
Sbjct: 227 VMPDK----NEVTWTAMLKGYTRSGRINEAAELFKAMP----VKPVAA-CNGMIMGFGLN 277
Query: 396 GQLEKAHSLIMDYKDFCDAGTWGALL 421
G++ KA + D D GTW AL+
Sbjct: 278 GEVGKAR-WVFDQMKEKDDGTWSALI 302
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 97/239 (40%), Gaps = 28/239 (11%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
+ + +QVHS L+++ H Y ++ + + +L ++VFD+ K +W
Sbjct: 345 SLDHGRQVHSQLVRS----HFDLDIYVSSVLITMYIKCGDLVTGKRVFDRF-SSKDIVMW 399
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
S+I + H +++ ++ +M G TF VL+A CGYT G
Sbjct: 400 NSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSA------------CGYT--G 445
Query: 132 LMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKEFYDRM-TEKNSVTWVAM 185
+ + +F+SM + + ++ MV G + A + M E +++ W A+
Sbjct: 446 KVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGAL 505
Query: 186 IAG---YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
++ + A K ++ A + ++ Y K E+ K MR NV
Sbjct: 506 LSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNV 564
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 262/490 (53%), Gaps = 54/490 (11%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+++AR +FD P K + LW ++ R + +A +R+ + L+ KM + V + FTF VL
Sbjct: 115 MAHARHLFDHFPDPKVE-LWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLK 173
Query: 112 ACARVPSLLEA--VICGYTKIGL-------------------MDDAQRLFDSMAERNVIS 150
+CA++ + +E + C K GL + A +LF M ERN+++
Sbjct: 174 SCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVA 233
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
W++M++GY C + A+ +D E++ V W M++GY + G+++ A+K+FD + D
Sbjct: 234 WTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDT 293
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENV------------------------RI--- 243
W M Y NG +A ++++ M + NV R+
Sbjct: 294 MSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLID 353
Query: 244 -----SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
++ +V +SAC +LG +++ + + + YV NALI M+SKCG ++
Sbjct: 354 GLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIEN 413
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A F + KD+I+++SMI A HG +AL +F +M+ G +P+ +TFIGVL +C+H
Sbjct: 414 AMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTH 473
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GLVE+G F M + I P EH CMVDL GR+G L++A + DA W
Sbjct: 474 LGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWA 533
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALLGAC+++ N +L E+A + L+ L P+ N LL+NIY +G+WKD +K+++ +T
Sbjct: 534 ALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTG 593
Query: 479 KKKSPGCSWI 488
KK PGCS I
Sbjct: 594 SKKLPGCSLI 603
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 169/430 (39%), Gaps = 73/430 (16%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNH---VLHAHFR------QSILLYAKMHRLGV 99
G NL + + + T F+ +L + H VL HF +++ L K+ + +
Sbjct: 32 GWNLPPTLTFYSEWARNNTFFIDDTLTQKHPRWVLEEHFISLLRSCKTVALLQKV-QAQI 90
Query: 100 LTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY- 158
+T GF ++ + P+ V+ + + M A+ LFD + V W+A+ GY
Sbjct: 91 ITHGFQYNGYV-----APN----VVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYF 141
Query: 159 ---------------------ANC-------------GNMKAAKEFYDRMT----EKNSV 180
NC G +E + + E N
Sbjct: 142 HNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQF 201
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+I Y + A K+F + E + W +M Y+ A ++ + + +
Sbjct: 202 VATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERD 261
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V + + + G I ++GD++ A L + R N +++ ++ G ++
Sbjct: 262 VVLWNIMVSGYI----EIGDMKAARKLFDTMPY----RDTMSWNTMLNGYANNGDVEACE 313
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHG 359
+ F + ++V S++ +I +A +G E L F +M +G + PN T + VL+AC+
Sbjct: 314 QLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARL 373
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTW 417
G ++ G K + G K ++D+ + G +E A + MD KD TW
Sbjct: 374 GALDLG-KWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLI---TW 429
Query: 418 GALLGACKVH 427
+++ H
Sbjct: 430 NSMICGLATH 439
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 258/481 (53%), Gaps = 45/481 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR+VFD++P+ + WT+++R +V ++ L+ +M V++ +L
Sbjct: 176 INEAREVFDRMPE-RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQ 234
Query: 112 ------ACARVPSLLEA-------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
AC + E +I GY ++G + +A+ LFD M RNV+SW+ M+ GY
Sbjct: 235 EGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGY 294
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG------------------------- 193
+ A++ ++ M EKN V+W AM+ GY CG
Sbjct: 295 VQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMIL 354
Query: 194 ------EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
EV +A++VFD++ E D W+AM Y + G A+E++++M++E +R + +
Sbjct: 355 CFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPS 414
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++ +S C L +++ + + D YV++ L+ M+ KCG L A + F R
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
KDV+ ++S+IT +A HG EAL +F M GI P+ VTF+GVL+ACS+ G V+ G +
Sbjct: 475 VKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLE 534
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F M + ++ EH CMVDLLGR+G+L +A LI DA WGALLGAC+ H
Sbjct: 535 IFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+ +L E+AA+ LL L P+ G LL+NIYAS G+W D ++ + + K PGCSW
Sbjct: 595 MKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSW 654
Query: 488 I 488
I
Sbjct: 655 I 655
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 167/321 (52%), Gaps = 26/321 (8%)
Query: 106 FSSVLNA--CARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
F VLN C+ ++I Y+++G ++ A+ +FD M ++N+ISW+++VAGY
Sbjct: 85 FRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKR 144
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+ A+ +D+M+E+N+++W +++GY G + EA++VFD + E + W AM YV+
Sbjct: 145 PQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKE 204
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE-GCCDRTNYV 282
G A ++ M ++NV +S M+G + Q G ++ A L + E RTN
Sbjct: 205 GMISEAETLFWQMPEKNV-VSWTVMLGGL---LQEGRIDEACRLFDMMPEKDVVTRTN-- 258
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
+I + + G L A F + ++V+S+++MIT + + + A +F M
Sbjct: 259 ---MIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP---- 311
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLEK 400
E N+V++ +L ++ G +++ + F M P+ + C M+ G++G++ K
Sbjct: 312 EKNEVSWTAMLKGYTNCGRLDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPK 364
Query: 401 AHSLIMDYKDFCDAGTWGALL 421
A + D D GTW A++
Sbjct: 365 ARQ-VFDQMREKDEGTWSAMI 384
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+++ GY + +AQ +FD M+ERN ISW+ +V+GY N G + A+E +DRM E+N V+
Sbjct: 134 SIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVS 193
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W AM+ GY K G + EA+ +F ++ E + W M +Q G A ++ +M +++V
Sbjct: 194 WTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDV 253
Query: 242 RISEVAMVGAISACTQLGDVEMA--AILAKHVDEGCCDRTNYVSN--------------- 284
++ M+G +L + M + ++V T YV N
Sbjct: 254 -VTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE 312
Query: 285 -------ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
A++ ++ CG LD A F+ + K V++ ++MI F +G+ +A +F +M
Sbjct: 313 KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQM 372
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
R E ++ T+ ++ GL D + F +M R GI+P
Sbjct: 373 R----EKDEGTWSAMIKVYERKGLELDALELFRMMQRE-GIRP 410
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 282/545 (51%), Gaps = 69/545 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGD--NLSYARQVFDQIP 63
L+ LK +H+ LL+ L D Y L ++L+ + N +Y+ ++ DQ
Sbjct: 16 LIQGFSCLKHLKHIHAALLR-LGLDEDTY-----LLNKVLRFSFNFGNTNYSFRILDQ-T 68
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV------- 116
K FL+ ++IR VL+ F++SI +Y M + G+ FTF VL ACARV
Sbjct: 69 KEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGV 128
Query: 117 --PSLLEAVICG------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
SL+ C YTK G +D+A ++FD + ++N SW+A ++GY G
Sbjct: 129 KMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVG 188
Query: 163 NMKAAKEFYDRMTE---------------------------------------KNSVTWV 183
+ A + + R+ E +N
Sbjct: 189 KCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVAT 248
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
A++ YGKCG + A+ VFD + E + W++M Y NG K A++++ M E ++
Sbjct: 249 ALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKP 308
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
AMVG + +C +LG +E+ + ++ + + ALI M++KCG +D AW F
Sbjct: 309 DCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVF 368
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
++ KD + +++ I+ A G ++AL +F +M GI+P++ TF+G+L AC+H GLVE
Sbjct: 369 RGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVE 428
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G + F M VF + P EH CMVDLLGR+G L++AH LI +A WGALLG
Sbjct: 429 EGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGG 488
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C++H + +L E+ + L+ L P +GN LL+NIYA+ KW+++ ++ ++SE KK P
Sbjct: 489 CRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIP 548
Query: 484 GCSWI 488
G SWI
Sbjct: 549 GYSWI 553
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 258/481 (53%), Gaps = 45/481 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR+VFD++P+ + WT+++R +V ++ L+ +M V++ +L
Sbjct: 176 INEAREVFDRMPE-RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQ 234
Query: 112 ------ACARVPSLLEA-------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
AC + E +I GY ++G + +A+ LFD M RNV+SW+ M+ GY
Sbjct: 235 EGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGY 294
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG------------------------- 193
+ A++ ++ M EKN V+W AM+ GY CG
Sbjct: 295 VQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMIL 354
Query: 194 ------EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
EV +A++VFD++ E D W+AM Y + G A+E++++M++E +R + +
Sbjct: 355 CFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPS 414
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++ +S C L +++ + + D YV++ L+ M+ KCG L A + F R
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA 474
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
KDV+ ++S+IT +A HG EAL +F M GI P+ VTF+GVL+ACS+ G V+ G +
Sbjct: 475 VKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLE 534
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F M + ++ EH CMVDLLGR+G+L +A LI DA WGALLGAC+ H
Sbjct: 535 IFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+ +L E+AA+ LL L P+ G LL+NIYAS G+W D ++ + + K PGCSW
Sbjct: 595 MKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSW 654
Query: 488 I 488
I
Sbjct: 655 I 655
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 167/321 (52%), Gaps = 26/321 (8%)
Query: 106 FSSVLNA--CARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
F VLN C+ ++I Y+++G ++ A+ +FD M ++N+ISW+++VAGY
Sbjct: 85 FRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKR 144
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+ A+ +D+M+E+N+++W +++GY G + EA++VFD + E + W AM YV+
Sbjct: 145 PQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKE 204
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE-GCCDRTNYV 282
G A ++ M ++NV +S M+G + Q G ++ A L + E RTN
Sbjct: 205 GMISEAETLFWQMPEKNV-VSWTVMLGGL---LQEGRIDEACRLFDMMPEKDVVTRTN-- 258
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
+I + + G L A F + ++V+S+++MIT + + + A +F M
Sbjct: 259 ---MIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP---- 311
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLEK 400
E N+V++ +L ++ G +++ + F M P+ + C M+ G++G++ K
Sbjct: 312 EKNEVSWTAMLKGYTNCGRLDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPK 364
Query: 401 AHSLIMDYKDFCDAGTWGALL 421
A + D D GTW A++
Sbjct: 365 ARQ-VFDQMREKDEGTWSAMI 384
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 141/283 (49%), Gaps = 30/283 (10%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+++ GY + +AQ +FD M+ERN ISW+ +V+GY N G + A+E +DRM E+N V+
Sbjct: 134 SIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVS 193
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W AM+ GY K G + EA+ +F ++ E + W M +Q G A ++ +M +++V
Sbjct: 194 WTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDV 253
Query: 242 RISEVAMVGAISACTQLGDVEMA--AILAKHVDEGCCDRTNYVSN--------------- 284
++ M+G +L + M + ++V T YV N
Sbjct: 254 -VTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE 312
Query: 285 -------ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
A++ ++ CG LD A F+ + K V++ ++MI F +G+ +A +F +M
Sbjct: 313 KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQM 372
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
R E ++ T+ ++ GL D + F +M R GI+P
Sbjct: 373 R----EKDEGTWSAMIKVYERKGLELDALELFRMMQRE-GIRP 410
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 262/490 (53%), Gaps = 54/490 (11%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+++AR +FD P K + LW ++ R + +A +R+ + L+ KM + V + FTF VL
Sbjct: 73 MAHARHLFDHFPDPKVE-LWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLK 131
Query: 112 ACARVPSLLEA--VICGYTKIGL-------------------MDDAQRLFDSMAERNVIS 150
+CA++ + +E + C K GL + A +LF M ERN+++
Sbjct: 132 SCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVA 191
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
W++M++GY C + A+ +D E++ V W M++GY + G+++ A+K+FD + D
Sbjct: 192 WTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDT 251
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENV------------------------RI--- 243
W M Y NG +A ++++ M + NV R+
Sbjct: 252 MSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLID 311
Query: 244 -----SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
++ +V +SAC +LG +++ + + + YV NALI M+SKCG ++
Sbjct: 312 GLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIEN 371
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A F + KD+I+++SMI A HG +AL +F +M+ G +P+ +TFIGVL +C+H
Sbjct: 372 AMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTH 431
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GLVE+G F M + I P EH CMVDL GR+G L++A + DA W
Sbjct: 432 LGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWA 491
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALLGAC+++ N +L E+A + L+ L P+ N LL+NIY +G+WKD +K+++ +T
Sbjct: 492 ALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTG 551
Query: 479 KKKSPGCSWI 488
KK PGCS I
Sbjct: 552 SKKLPGCSLI 561
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 145/371 (39%), Gaps = 63/371 (16%)
Query: 99 VLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
++T GF ++ + P+ V+ + + M A+ LFD + V W+A+ GY
Sbjct: 48 IITHGFQYNGYV-----APN----VVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGY 98
Query: 159 ----------------------ANC-------------GNMKAAKEFYDRMT----EKNS 179
NC G +E + + E N
Sbjct: 99 FHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQ 158
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+I Y + A K+F + E + W +M Y+ A ++ + +
Sbjct: 159 FVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPER 218
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+V + + + G I ++GD++ A L + R N +++ ++ G ++
Sbjct: 219 DVVLWNIMVSGYI----EIGDMKAARKLFDTMPY----RDTMSWNTMLNGYANNGDVEAC 270
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSH 358
+ F + ++V S++ +I +A +G E L F +M +G + PN T + VL+AC+
Sbjct: 271 EQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACAR 330
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGT 416
G ++ G K + G K ++D+ + G +E A + MD KD T
Sbjct: 331 LGALDLG-KWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLI---T 386
Query: 417 WGALLGACKVH 427
W +++ H
Sbjct: 387 WNSMICGLATH 397
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 275/537 (51%), Gaps = 72/537 (13%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNL---SYARQVFDQIPKCKTQFLW 71
L Q+++ LL T + Y FLI L N+ S AR++FD+ P FLW
Sbjct: 90 HLNQIYAKLLVTGLQ-------YGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDV-FLW 141
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL------------ 119
+++R + H F +I +YA+M V GF+F VL AC+ +P+L
Sbjct: 142 NAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFR 201
Query: 120 ---------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
++ Y K G + A +F + +R ++SW+++++GYA G A
Sbjct: 202 HGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRI 261
Query: 171 YDRMTEKN-SVTWVAMIAG--------------------------------------YGK 191
+ M + N W+A+++ Y K
Sbjct: 262 FSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAK 321
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG V A+ F+++ P W AM YV+NGYA+ AIE++++M+ +N+R + + +
Sbjct: 322 CGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSS 381
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
I+AC Q+G +E+A + +++ V+ +LI ++KCG +D+A F RI +KDV
Sbjct: 382 IAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDV 441
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+ +S+M+ + HG+ +E++ +F MR G+ PN VTF+G+LTAC + GLVE+G F
Sbjct: 442 VVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHR 501
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M R +GI+P +H C+VDLLGR+G L++A++ +M+ WGALL ACK+H +
Sbjct: 502 M-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVT 560
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LGE AA L L P TG+ L+N+YAS W V++++ E K G S I
Sbjct: 561 LGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVI 617
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 172/411 (41%), Gaps = 78/411 (18%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
K + SLI + + H Q +YAK+ G+ GF + ++N
Sbjct: 73 KPDKFYASLIDDSIHKTHLNQ---IYAKLLVTGLQYGGFLIAKLVNKA------------ 117
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT---------- 175
+ IG + A++LFD + +V W+A+V Y+ G A E Y RM
Sbjct: 118 --SNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFS 175
Query: 176 -----------------------------EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
E + ++A Y KCGE+ A VF +
Sbjct: 176 FPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLV 235
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
+ W ++ Y QNG A+ ++ MR+ NVR +A+V + A T + D+E
Sbjct: 236 DRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKS 295
Query: 267 LAKHVDEGC-------CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+ GC C+ +S L +++KCG++ +A F++++N +I +++MI+
Sbjct: 296 I-----HGCVIKMGLECEFDLLIS--LTSLYAKCGHVMVARLFFNQVENPSLIFWNAMIS 348
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK 379
+ +G ++EA+++F M+++ I P+ +T + AC+ G +E M +
Sbjct: 349 GYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELA----RWMDEYISMS 404
Query: 380 PLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+ T ++D + G ++ A + D D W A++ +H
Sbjct: 405 EFRNDVIVNTSLIDTYAKCGSVDMAR-FVFDRIPDKDVVVWSAMMVGYGLH 454
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 260/456 (57%), Gaps = 19/456 (4%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ +S A ++F+++P K W ++I + + ++ L+ KM V+ S T S+
Sbjct: 129 NKISDAEKLFNEMPN-KNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVV-SWNTVMSM 186
Query: 110 LNACARVPSLLE--------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
L C R+ A+I G +K G +D+A+ LFD M ERNV+SW+AM+
Sbjct: 187 LAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMI 246
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
GYA + A + ++RM E++ +W MI G + G++R A+K+F+E+ + + W
Sbjct: 247 TGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTT 306
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
M VQ G ++ A++++ M N + ++ V + AC+ L + + + + +
Sbjct: 307 MITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKT 366
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSR--IKNKDVISYSSMITAFADHGKSQEALD 332
+ +V +ALI+M+SKCG L A + F +D++S++ +I A+A HG +EA++
Sbjct: 367 VYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAIN 426
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
F +MR G +P+ VT++G+L+ACSH GLVE+G K F+ + + I +H C+VDL
Sbjct: 427 FFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLC 486
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR+G+L++A I + A WGALL C VH N ++G+ AA+ LLE+ PE G
Sbjct: 487 GRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYL 546
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYAS GKW+++ V++ + + KK PGCSWI
Sbjct: 547 LLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWI 582
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 190/375 (50%), Gaps = 29/375 (7%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++ + WT++I ++ ++ L+ R+ + T++
Sbjct: 71 ARRLFDEMREPDV-ITWTTVISGYIKCGMIEEARRLF---DRVDAKKNVVTWT------- 119
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
A++ GY + + DA++LF+ M +NV+SW+ M+ GYA G + +A +++M
Sbjct: 120 -------AMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKM 172
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E+N V+W +++ +CG + EA+++FD + E D W AM +NG A ++
Sbjct: 173 PERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFD 232
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M + NV +S AM+ + +L + A L + + E N + LI + G
Sbjct: 233 RMPERNV-VSWNAMITGYAQNLRLDE---ALDLFERMPERDLPSWNTMITGLI----QNG 284
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTFIGVL 353
L A + F+ + K+VIS+++MIT G+S+EAL +F +M G +PNQ TF+ VL
Sbjct: 285 DLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVL 344
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD-YKDFC 412
ACS+ + +G + +++++ + T ++ ++++ + G+L A + D
Sbjct: 345 GACSNLAGLGEGQQVHQIISKTV-YQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQR 403
Query: 413 DAGTWGALLGACKVH 427
D +W ++ A H
Sbjct: 404 DLVSWNGIIAAYAHH 418
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 144/286 (50%), Gaps = 36/286 (12%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM-TEKNSVT 181
+I +K G + +A+RLFD M E +VI+W+ +++GY CG ++ A+ +DR+ +KN VT
Sbjct: 58 MITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVT 117
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W AM+ GY + ++ +A+K+F+E+ + W M Y QNG +A+ +++ M + NV
Sbjct: 118 WTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV 177
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
V+ +S Q G +E A L + E R A+I SK G +D A
Sbjct: 178 ----VSWNTVMSMLAQCGRIEEARRLFDRMPE----RDVISWTAMIAGLSKNGRIDEARL 229
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR----------------------- 338
F R+ ++V+S+++MIT +A + + EALD+F +M
Sbjct: 230 LFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRA 289
Query: 339 ----NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
NE + N +++ ++T C G E+ K F M G KP
Sbjct: 290 RKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKP 335
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 141/288 (48%), Gaps = 25/288 (8%)
Query: 141 DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKK 200
D + NV + M+ + G + A+ +D M E + +TW +I+GY KCG + EA++
Sbjct: 45 DFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARR 104
Query: 201 VFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+FD + ++ + W AM Y+++ A +++ M +NV V+ I Q G
Sbjct: 105 LFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNV----VSWNTMIDGYAQNG 160
Query: 260 DVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
++ A L + + E N VS N ++ M ++CG ++ A R F R+ +DVIS+++MI
Sbjct: 161 RIDSAMYLFEKMPE-----RNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMI 215
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
+ +G+ EA +F +M E N V++ ++T + +++ FE M
Sbjct: 216 AGLSKNGRIDEARLLFDRMP----ERNVVSWNAMITGYAQNLRLDEALDLFERMPE---- 267
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGAC 424
+ L T + L+ ++G L +A L M K+ +W ++ C
Sbjct: 268 RDLPSWNTMITGLI-QNGDLRRARKLFNEMPKKNVI---SWTTMITGC 311
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 259/451 (57%), Gaps = 22/451 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++P CK W ++I +V +++ L+ + ++++++N
Sbjct: 254 ARKLFDRMP-CKNVVSWNAMIAAYVQDLQIDEAVKLFKETP----YKDCVSWTTMINGYV 308
Query: 115 RVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
RV L EA ++ G + G +D+A ++F + +R+ I W++M+AG
Sbjct: 309 RVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAG 368
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
Y G M A + +M KN+V+W MI+GY + GE+ A ++F+ + + W ++
Sbjct: 369 YCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLI 428
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
++QNG A++ +M QE + + ++S+C L +++ L + + +
Sbjct: 429 TGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYI 488
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
+VSNALI M++KCG + A + F I+ D+IS++S+I+ +A +G + EA F +M
Sbjct: 489 NDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQM 548
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+EG P++VTFIG+L+ACSH GL G F+ M F I+PL EH +C+VDLLGR G+
Sbjct: 549 SSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGR 608
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
LE+A +++ K +AG WG+LL AC+VH N ELG+IAA LLEL P N L+N+
Sbjct: 609 LEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNM 668
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+A G+W+D E +++++ E K PGCSWI
Sbjct: 669 HAEAGRWEDVERLRVLMRERRAGKLPGCSWI 699
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 193/428 (45%), Gaps = 82/428 (19%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++F+ +P W ++I + F + ++ KM +++
Sbjct: 126 LEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVS---------- 175
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+++ GYT+ G M A + F+ MAERNV+SW+ MVAG+ N ++ +A E +
Sbjct: 176 --------YNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELF 227
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ--------- 222
+++ + N+V+WV M+ G+ + G++ EA+K+FD + + W AM YVQ
Sbjct: 228 EKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVK 287
Query: 223 -----------------NGYAKA-----AIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
NGY + A E+Y M ++V M G I Q G
Sbjct: 288 LFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLI----QNGR 343
Query: 261 VEMAAILAKHVDE-----------GCCDR---------------TNYVS-NALIHMHSKC 293
++ A+ + +++ G C N VS N +I +++
Sbjct: 344 IDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQA 403
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G +D A F + ++VIS++S+IT F +G +AL + M EG +P+Q TF L
Sbjct: 404 GEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSL 463
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
++C++ ++ G + EL+ + I L ++ + + G ++ A + D + D
Sbjct: 464 SSCANLAALQVGKQLHELILKSGYINDLFVS-NALIAMYAKCGGVQSAEKVFKDIEG-VD 521
Query: 414 AGTWGALL 421
+W +L+
Sbjct: 522 LISWNSLI 529
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 153/294 (52%), Gaps = 24/294 (8%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+++ + K G + DA++LFD M++RN++SW+ M+AGY + ++ A + +D M E+++ +
Sbjct: 53 SMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFS 112
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEP-DASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W MI Y + G + +A+++F+ + + D +CW AM Y + G A ++++ M ++
Sbjct: 113 WALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKD 172
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+ +S +M+ + ++G LA E +R N ++ L AW
Sbjct: 173 L-VSYNSMLAGYTQNGKMG-------LAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAW 224
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +I + + +S+ +M+ FA HGK EA +F +M + N V++ ++ A
Sbjct: 225 ELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCK----NVVSWNAMIAA----- 275
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQLEKAHSLI--MDYKD 410
V+D Q + ++F P + + T M++ R G+L++A + M YKD
Sbjct: 276 YVQD--LQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKD 327
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 133/244 (54%), Gaps = 11/244 (4%)
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K G +D+A+R+F ++ +N ++++MV +A G + A++ +D+M+++N V+W MIAG
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAG 88
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y V EA K+FD ++E D WA M CY + G + A E+++++ + AM
Sbjct: 89 YLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAM 148
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+ + + D E + K + D +Y N+++ +++ G + LA + F R+
Sbjct: 149 IAGYAKKGRFDDAE--KVFEKMPVK---DLVSY--NSMLAGYTQNGKMGLAMKFFERMAE 201
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
++V+S++ M+ F ++ A ++F K+ +PN V+++ +L + G + + K
Sbjct: 202 RNVVSWNLMVAGFVNNCDLGSAWELFEKIP----DPNAVSWVTMLCGFARHGKIVEARKL 257
Query: 369 FELM 372
F+ M
Sbjct: 258 FDRM 261
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 125/282 (44%), Gaps = 25/282 (8%)
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+NV + + + G + AK + + KN T+ +M+ + K G V +A+++FD++
Sbjct: 15 KNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM 74
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA- 264
S+ + W M Y+ N + A +++ +M + + + I+ T+ G +E A
Sbjct: 75 SQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERD----NFSWALMITCYTRKGMLEKAR 130
Query: 265 ---AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
++ +D C NA+I ++K G D A + F ++ KD++SY+SM+ +
Sbjct: 131 ELFELVPDKLDTACW-------NAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGY 183
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
+GK A+ F +M + + G + C G +EL ++ P
Sbjct: 184 TQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGS-------AWELFEKI--PDPN 234
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
M+ R G++ +A L D + +W A++ A
Sbjct: 235 AVSWVTMLCGFARHGKIVEARKLF-DRMPCKNVVSWNAMIAA 275
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 248/442 (56%), Gaps = 22/442 (4%)
Query: 48 PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTS-GFTF 106
PG + YARQ+F++IP+ T +I+L H LGV + GF
Sbjct: 86 PG-HFEYARQLFEKIPQPNT----------------VSYNIMLACHWHHLGVHDARGFFD 128
Query: 107 SSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
S L A +++ A+ ++GLM +A+RLF +M E+N +SWSAMV+GY CG++ A
Sbjct: 129 SMPLKDVASWNTMISAL----AQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDA 184
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A E + ++ +TW AMI GY K G V A+++F E+S W AM YV+NG A
Sbjct: 185 AVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRA 244
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ + +++ M + V+ + +++ + C+ L +++ + + V + +L
Sbjct: 245 EDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSL 304
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M+SKCG L AW F +I KDV+ +++MI+ +A HG ++AL +F +M+ EG++P+
Sbjct: 305 VSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDW 364
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TF+ VL AC+H GLV+ G + F M R FGI+ EH CMVDLLGR+G+L +A LI
Sbjct: 365 ITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIK 424
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+G LLGAC++H N L E AA++LLEL P LAN+YA+ +W
Sbjct: 425 SMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDH 484
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
++ + + K PG SWI
Sbjct: 485 VASIRRSMKDNNVVKIPGYSWI 506
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 153/309 (49%), Gaps = 17/309 (5%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA-NCGNMKAAKEFYDRMTEKNSVT 181
+I Y + G +D A R+F+ M ++ ++W++++A +A G+ + A++ ++++ + N+V+
Sbjct: 47 LIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIPQPNTVS 106
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
+ M+A + V +A+ FD + D + W M Q G A ++ M ++N
Sbjct: 107 YNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEKNC 166
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+S AMV AC L D + A + R+ A+I + K G ++LA R
Sbjct: 167 -VSWSAMVSGYVACGDL-DAAVECFYAAPM------RSVITWTAMITGYMKFGRVELAER 218
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F + + ++++++MI + ++G++++ L +F M G++PN ++ VL CS+
Sbjct: 219 LFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSA 278
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTC---MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
++ G + +L+ + PL+ T +V + + G L+ A L + D W
Sbjct: 279 LQLGKQVHQLVCKC----PLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPR-KDVVCWN 333
Query: 419 ALLGACKVH 427
A++ H
Sbjct: 334 AMISGYAQH 342
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 279/511 (54%), Gaps = 31/511 (6%)
Query: 8 PRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRL-LQLPGDNLS-----YARQVFDQ 61
P LKQ+H+ ++ + ++ ++ ++ + L G + YA Q+F Q
Sbjct: 10 PTLPNLKTLKQIHALMI--INGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQ 67
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV----- 116
IP+ T F++ +IR + ++I LY +MHR V +TF VL AC R+
Sbjct: 68 IPQPDT-FMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNT 126
Query: 117 ----------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
+ ++ + K G ++ A LFD + +V++WS+++AGYA
Sbjct: 127 GSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYAR 186
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
G++K A++ ++ M E++ V+W MI GY K GE+ A+ +FDE D W AM Y
Sbjct: 187 RGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGY 246
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA-ILAKHVDEGCCDRT 279
V G +K A+E++ M + V EV ++ +SAC LGD+E + AK ++ +
Sbjct: 247 VVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLS 306
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
+ NALI M++KCG + + F I +KDVIS++S+I A HG +E+L +F M+
Sbjct: 307 TLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQR 366
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
I PN++TF+GVL ACSH G +++G K F+LM+ + I+P H CMVD+LGR+G L+
Sbjct: 367 TKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLK 426
Query: 400 KAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYA 459
+A I K +A W LL ACKVH + EL ++A L + + +G+ L++N+YA
Sbjct: 427 EAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYA 486
Query: 460 SMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
S G+W +E V+ ++ ++ K G S++ +
Sbjct: 487 SRGEWDGAEKVRKLMDDSGVTKIRGSSFVEA 517
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/541 (31%), Positives = 292/541 (53%), Gaps = 67/541 (12%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R ++ Q ++VH+ +LK+ +P+ Y L+ + G +L+ AR+VFD I + +
Sbjct: 108 RLRSLEQGREVHAAILKSGIQPN---RYLENTLLSMYAKCG-SLTDARRVFDGI-RDRNI 162
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE------- 121
WT++I V ++ Y M G TF S+LNA P LL+
Sbjct: 163 VSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTN-PELLQVGQKVHM 221
Query: 122 ---------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
+++ Y K G + AQ +FD + E+NV++W+ ++AGYA G +
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281
Query: 167 AKEFYDRMTE----KNSVTWVAMI---------------------AGYG----------- 190
A E ++M + N +T+ +++ +GYG
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341
Query: 191 ---KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
KCG ++EA+K+F ++ D W AM Y Q G+ AI++++ M+Q+ ++ ++
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMT 401
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
A+++C+ ++ + + + Y+ +AL+ M++KCG +D A F+++
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS 461
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
++V+++++MIT A HG+ +EAL+ F +M+ +GI+P++VTF VL+AC+H GLVE+G K
Sbjct: 462 ERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 521
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F M +GIKP+ EH +C VDLLGR+G LE+A ++I+ WGALL AC++H
Sbjct: 522 HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIH 581
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+ E GE AA ++L+L P+ G L+NIYA+ G+++D+E V+ ++ + + K PG SW
Sbjct: 582 SDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSW 641
Query: 488 I 488
I
Sbjct: 642 I 642
>gi|125528817|gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
Length = 565
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 218/367 (59%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
+++C + ++ + DA+ LF +M R +SW+AMV Y N G++ +A+ +D+M ++S
Sbjct: 151 FNSLLCAHARLASVPDAESLFAAMPSRTQVSWNAMVVVYVNAGDVSSARRVFDQMPTRDS 210
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W +I GY KCG +R A++VFD + + W AM Y Q+G K ++ +++ M
Sbjct: 211 TSWSVLIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYAQSGVPKESLALFREMEAA 270
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ MVG ISA +Q+G E+A + +VD+ +R + V AL+ MH+KCG +D A
Sbjct: 271 GIEPDAATMVGVISAASQIGSTELAGWVGSYVDKKRIERNDKVLTALVDMHAKCGNVDEA 330
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F I D Y+++I+ A HG ++ AL +F +M+ + + P+ +TF+GVLTACSH
Sbjct: 331 LSAFREIAQPDAYPYTALISGLAAHGHAKLALQVFERMQAQSVWPDPITFVGVLTACSHA 390
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV+ G +E M + +G++ +H C+VD+LGR+G+LE+A ++ G GA
Sbjct: 391 GLVDKGLDYWEAMVKYYGMERRADHYACVVDMLGRAGRLEEAFEMVQTMPMGPHPGALGA 450
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL ACK H N E+ EI A L EL P TGN +L+NIYA +W+++E ++ ++
Sbjct: 451 LLSACKTHGNVEIAEIVANKLFELEPHNTGNYIMLSNIYAEKEQWEEAERIRSVMRTRVP 510
Query: 480 KKSPGCS 486
K PG S
Sbjct: 511 FKQPGSS 517
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 133/326 (40%), Gaps = 84/326 (25%)
Query: 51 NLSYARQVFDQIP---------------KC---------------KTQFLWTSLIRNHVL 80
++S AR+VFDQ+P KC K WT++I +
Sbjct: 194 DVSSARRVFDQMPTRDSTSWSVLIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYAQ 253
Query: 81 HAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLF 140
++S+ L+ +M G+ T V++A +++ S + G+ +G D +R+
Sbjct: 254 SGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGS---TELAGW--VGSYVDKKRI- 307
Query: 141 DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKK 200
ERN +A+V +A CGN+ A + + + ++ + A+I+G G + A +
Sbjct: 308 ----ERNDKVLTALVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGHAKLALQ 363
Query: 201 VFDEISE----PDASCW-AAMTVC----YVQNG--YAKAAIEMYKVMRQENVRISEVAMV 249
VF+ + PD + +T C V G Y +A ++ Y + R+ + V M+
Sbjct: 364 VFERMQAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACVVDML 423
Query: 250 GA--------------------------ISACTQLGDVEMAAILAKHVDEGCCDRT-NYV 282
G +SAC G+VE+A I+A + E T NY+
Sbjct: 424 GRAGRLEEAFEMVQTMPMGPHPGALGALLSACKTHGNVEIAEIVANKLFELEPHNTGNYI 483
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKN 308
+ I+ + W E RI++
Sbjct: 484 MLSNIYAEKE------QWEEAERIRS 503
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 274/536 (51%), Gaps = 57/536 (10%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ K L+QVH+ ++ + +Q H+ I LSYA VF ++
Sbjct: 35 LLKACKKREHLEQVHACIIH---RGLEQDHFLVFLFISRAHTLLSTLSYASSVFHRVLAP 91
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMH------------------------------ 95
T LW +LI++H F ++ +A+M
Sbjct: 92 ST-VLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSGTCKAREGKSL 150
Query: 96 -----RLGV---LTSGFTFSSVLNACARVPSLLE--------------AVICGYTKIGLM 133
R GV L G + + C + + A++ GY +G +
Sbjct: 151 HGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGDV 210
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
+A++LFD M RNV SW++M+ G+ G++ A+ +D M EKN V++ MI GY K G
Sbjct: 211 VEARKLFDEMPHRNVASWNSMLQGFVKMGDLSGARGVFDAMPEKNVVSFTTMIDGYAKAG 270
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
++ A+ +FD E D W+A+ YVQNG A+ ++ M NV+ E +V +S
Sbjct: 271 DMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVFLEMELMNVKPDEFILVSLMS 330
Query: 254 ACTQLGDVEMAAILAKHVDEGCCD-RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
A QLG +E+A + +V + C D + ++V AL+ M++KCG ++ A + F +DV+
Sbjct: 331 ASAQLGHLELAQWVDSYVSKICIDLQQDHVIAALLDMNAKCGNMERALKLFDEKPRRDVV 390
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
Y SMI + HG+ +EA+++F +M EG+ P++V F +LTACS GLV++G F+ M
Sbjct: 391 LYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILTACSRAGLVDEGRNYFQSM 450
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+ + I PL +H CMVDLL RSG + A+ LI AG WGALLGACK++ ++EL
Sbjct: 451 KQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHAGAWGALLGACKLYGDSEL 510
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
GEI A L EL P N LL++IYA+ +W D +V+ + E +K PG S I
Sbjct: 511 GEIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRERRVRKIPGSSKI 566
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/549 (31%), Positives = 292/549 (53%), Gaps = 78/549 (14%)
Query: 6 LVPRSKTFNQLKQVHSYLL-KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
L+ + + QLKQ+H+ LL ++ KP+ FL ++ L + +YA F I
Sbjct: 38 LLQQCLSIKQLKQIHAQLLTNSIHKPN-------SFLYKIADL--KDFAYASVFFSNILD 88
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSIL---LYAKMHRLGVLTSGFTFSSVLNACARVPSL-- 119
T++ + +IR L + +S L Y++M LG+ + T+ + AC+ + ++
Sbjct: 89 -PTEYSFNVMIRG--LSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVEN 145
Query: 120 -------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
++I Y + G M DA+++FD +++++++SW++M++GY+
Sbjct: 146 GRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSK 205
Query: 161 CGNMKAAKEFYDRMTEKN---------SV-------------TWV--------------- 183
+ A + M E SV TWV
Sbjct: 206 MRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFM 265
Query: 184 --AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
A+I YGKCG++ A+++FD + + D W AM Y QNG ++ AI++++ MR +
Sbjct: 266 GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST 325
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
++ ++G +SAC +G +++ + + E YV AL+ M++KCG LD A+R
Sbjct: 326 APDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFR 385
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG--IEPNQVTFIGVLTACSHG 359
F + NK+ +S+++MI+A A HG++QEAL +F M NEG + PN +TF+GVL+AC H
Sbjct: 386 VFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHA 445
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV++G + F +M+ FG+ P EH +CMVDL R+G LE+A +M + D GA
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGA 505
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LLGAC+ N ++ E + LLEL P +GN + + +YA++ +W DS ++M++ +
Sbjct: 506 LLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565
Query: 480 KKSPGCSWI 488
K+PGCSWI
Sbjct: 566 SKTPGCSWI 574
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 286/545 (52%), Gaps = 67/545 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
++ + KT L ++H++L+KT L KP + I L ++ YA +F QI
Sbjct: 30 ILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILL----PTSMDYAVSIFRQID 85
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-- 121
+ + + +IR L ++ILL+ +MH V FTF +L C+R+ +L E
Sbjct: 86 EPDSP-AYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGE 144
Query: 122 ---AVI--CG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
A+I CG Y G ++ A+R+FD M+ERNV +W++M AGY G
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSG 204
Query: 163 NMKAAKEFYDRMTEK----NSVTWVAMIAG------------------------------ 188
N + + + M E + VT V+++
Sbjct: 205 NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLIT 264
Query: 189 -----YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
Y KCG+V A+++FD++ D W+AM Y Q + A++++ M++ N+
Sbjct: 265 SLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDP 324
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+E+ MV +S+C LG +E + + + T + AL+ ++KCG ++ + F
Sbjct: 325 NEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVF 384
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
++ K+V+S++ +I A +G+ ++AL+ F M + +EPN VTFIGVL+ACSH GLV+
Sbjct: 385 GKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVD 444
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G F M+R FGI+P EH CMVD+LGR+G +E+A I + +A W LL +
Sbjct: 445 EGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLAS 504
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
CKVH N E+GE + + L+ L P +G+ LL+NIYAS+G+W+D+ V+ + E KK+P
Sbjct: 505 CKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTP 564
Query: 484 GCSWI 488
GCS I
Sbjct: 565 GCSLI 569
>gi|357478647|ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510664|gb|AES91806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 576
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 262/454 (57%), Gaps = 23/454 (5%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
Y L+ L GD ++ AR+VFD++P K W SL+ ++ + + + ++
Sbjct: 140 YVQTALLDLYCKIGDVVT-ARKVFDEMPD-KNVVSWNSLLSGYIKGGNLDEGQRFFDEIP 197
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
V++ ++ GY K G MD A LF M ERN SW+ M+
Sbjct: 198 LKDVIS------------------WNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMI 239
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
GY +CG++ A+E +D M +NSV+ + MIAGY K G+V A+++FD++ + D + A
Sbjct: 240 TGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNA 299
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRI--SEVAMVGAISACTQLGDVEMAAILAKHVDE 273
M CY Q+ K A++++ VM + + + ++ + ISAC+QLG++E + ++
Sbjct: 300 MIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINN 359
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
++++ ALI +++KCG +D A+ F ++ +DV++YS+MI +G++ +A+++
Sbjct: 360 FGIVLDDHLATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVEL 419
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F +M E I PN VT+ G+LTA +H GL E+G + F M + GI P +H MVDLLG
Sbjct: 420 FERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCFISM-KDNGIVPSVDHYGIMVDLLG 478
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R+G L++A+ LIM + G WGALL AC++H N +LGEIA +H ++L E G +L
Sbjct: 479 RAGWLDEAYKLIMKMPMQPNVGVWGALLLACRLHDNLKLGEIAVQHCIKLESETAGYYSL 538
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
L+ IYA++GKW D++ + + + K PGCSW
Sbjct: 539 LSGIYATVGKWNDAKKLTTGVEGKKIIKIPGCSW 572
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
+ + PD+ W + + Q G A+ +Y MR+ + S A+ + +C ++ D
Sbjct: 60 ILHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVED 119
Query: 261 VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
++ HV + D YV AL+ ++ K G + A + F + +K+V+S++S+++
Sbjct: 120 DLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSG 179
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+ G E F +E + +++ +++ + G ++ C F+ M
Sbjct: 180 YIKGGNLDEGQRFF----DEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQM 227
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 268/487 (55%), Gaps = 26/487 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGD--NLSYARQVFDQIPKCKTQ 68
+ LK VH+ LL+ L D Y L ++L+ + N +Y+ ++F Q K
Sbjct: 21 NSLKHLKHVHAALLR-LGLDEDSY-----LLNKVLRFSFNFGNTNYSHRIFHQ-TKEPNI 73
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
FL+ ++I VL+ F++SI +Y M + G+ FTF +L ACAR LL++ + G
Sbjct: 74 FLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACAR---LLDSKL-GIK 129
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
GL+ A E + +++V+ Y CG + A + +D + EKN W A+I+G
Sbjct: 130 LHGLVVKAG------CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISG 183
Query: 189 Y---GKCGEV----REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
Y GKC E R A VFD + E D W++M Y NG K A++++ M E
Sbjct: 184 YIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGF 243
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
R AMVG + AC +LG +E+ + +D + ALI M++KCG +D AW
Sbjct: 244 RPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWE 303
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F ++ KD++ +++ I+ A G + A +F +M GIEP+ TF+G+L AC+H GL
Sbjct: 304 VFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGL 363
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + F M RVF + P EH CMVDLLGR+G L++AH L+ +A WGALL
Sbjct: 364 VDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALL 423
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
G C++H + +L E + L+ L P +GN LL+NIY++ KW+D+ ++ ++SE KK
Sbjct: 424 GGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKK 483
Query: 482 SPGCSWI 488
PG SWI
Sbjct: 484 VPGYSWI 490
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 266/505 (52%), Gaps = 25/505 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L + K+ +KQ+ + + KT + + L+ D+L YAR++F I +
Sbjct: 11 LFSKCKSLRTVKQIQALIFKTCLNSYPLVS--GKLLLHCAVTLPDSLHYARRLFLDI-RN 67
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSVLNACARVPSLLEAV- 123
F++ +LIR ++ L+ +M R V L F+F+ +L A A +L +
Sbjct: 68 PDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQ 127
Query: 124 --------------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
I Y + + A+++FD M E N+++W+A+VA C
Sbjct: 128 LHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEG 187
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+K A++ + M +N +W M+AGY K GE++ A++VF ++ D W+ M V + N
Sbjct: 188 VKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHN 247
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G A ++ +R+E +R +EV++ G +SAC Q G E IL V++ + V+
Sbjct: 248 GNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVN 307
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
NALI +SKCG LD+A F + + +S+++MI A HG +EA+ +F +M I+
Sbjct: 308 NALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIK 367
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
P+ +TFI +L ACSH GLV+ GC F M +GI+P+ EH CMVDL GR+G+L++A+
Sbjct: 368 PDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYD 427
Query: 404 LIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGK 463
+ + W LLGAC +H N L R L EL PE +G+ LL+NIYA GK
Sbjct: 428 FVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGK 487
Query: 464 WKDSEIVKMMISETEKKKSPGCSWI 488
WKD ++ ++ KK+PG S I
Sbjct: 488 WKDVAALRRSMTHQRLKKTPGWSMI 512
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/479 (35%), Positives = 263/479 (54%), Gaps = 21/479 (4%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
K + +H+ +++T HDQ + LIR+ D++ YA VF + +L
Sbjct: 40 KNIAHVPSIHAKIIRTF---HDQDAFVVFELIRVCSTL-DSVDYAYDVFSYVSNPNV-YL 94
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC-ARVPSLLEAVICGYTK 129
+T++I V + LY +M VL + +SVL AC +V + A + K
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVL---K 151
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
+G + R+V M+ Y G + AK+ +D M +++ V MI Y
Sbjct: 152 LGFG----------SSRSV--GLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCY 199
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
+CG ++EA ++F ++ D CW AM V+N A+E+++ M+ ENV +E V
Sbjct: 200 SECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAV 259
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+SAC+ LG +E+ + V+ + +N+V NALI+M+S+CG ++ A R F +++K
Sbjct: 260 CVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK 319
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
DVISY++MI+ A HG S EA++ F M N G PNQVT + +L ACSHGGL++ G + F
Sbjct: 320 DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVF 379
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M RVF ++P EH C+VDLLGR G+LE+A+ I + D G LL ACK+H N
Sbjct: 380 NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN 439
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
ELGE A+ L E +G LL+N+YAS GKWK+S ++ + ++ +K PGCS I
Sbjct: 440 MELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTI 498
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/486 (34%), Positives = 274/486 (56%), Gaps = 19/486 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLL--KTLTKPHDQYHYYAQFLIRLLQLPGD-NLSYARQVFDQI 62
L+ + T +KQ+ S+L TL P + A +I + ++S+A +F +
Sbjct: 19 LLDQCVTMAHIKQIQSHLTVSGTLFDP-----FAAGRIISFCAVSAQGDISHAYLLFLSL 73
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA 122
P+ +T F+W +++R + LY M G L + +TFS +L ACA++ L
Sbjct: 74 PR-RTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDL--- 129
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
G++ AQ + + + + ++ YA+C M +A+ +D ++ VTW
Sbjct: 130 ------SFGILLHAQAVRLGWEAYDFVQ-NGLLHLYASCNCMDSARRLFDGSVNRDVVTW 182
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A+I GY K G+V A+++FDE+ E +A W+AM Y Q G + A+E++ M+ R
Sbjct: 183 TAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFR 242
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+ A+VGA++AC LG ++ + +VD + ALI M++KCG ++ A R
Sbjct: 243 PNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRV 302
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + ++DV +++S+I+ A+HG S A++MF +M+NEG+ PN+VTFI +L+ACS GLV
Sbjct: 303 FDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLV 362
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G + F+ MT ++GI+P+ +H C+VDLLGR+G LE A ++ + D+ GALL
Sbjct: 363 EEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLN 422
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC+VH + ELG+ L E + G LL+N+YAS +W+D V+ + E + KK
Sbjct: 423 ACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKV 482
Query: 483 PGCSWI 488
PGCS I
Sbjct: 483 PGCSLI 488
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 266/476 (55%), Gaps = 21/476 (4%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
T + LK +H++L++ H + +A + + + + L YA QVF QI + F++
Sbjct: 27 TLSHLKIIHAHLIRA----HTIFDVFAASCLISISINKNLLDYAAQVFYQI-QNPNLFIY 81
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
S IR +S Y + R G++ T+ ++ AC + SL +G
Sbjct: 82 NSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSL---------DMG 132
Query: 132 LMDDAQRL---FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
+ Q + FDS +V +++V Y+ G++K+A + R++ + V+W +M+AG
Sbjct: 133 IQAHGQIIRHGFDS----DVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAG 188
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y K G+V A+K+FD++ E + W+ M Y +N + AIE+Y +++ E V +E M
Sbjct: 189 YIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVM 248
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V I++C LG +E+ ++ + AL+ M+++CG +D A F ++
Sbjct: 249 VSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPG 308
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+D +S++++I FA HG +++AL+ F +M G+ P ++TF VL+ACSHGGLVE G +
Sbjct: 309 RDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLEL 368
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
FE M R + I+P EH CMVDLLGR+G+L +A + + +A WGALLGAC++H
Sbjct: 369 FESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHK 428
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
N+E+ E A + L+EL PE +G LL+NIYA KW++ E ++ M+ E K PG
Sbjct: 429 NSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPG 484
>gi|242038381|ref|XP_002466585.1| hypothetical protein SORBIDRAFT_01g010380 [Sorghum bicolor]
gi|241920439|gb|EER93583.1| hypothetical protein SORBIDRAFT_01g010380 [Sorghum bicolor]
Length = 529
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 223/369 (60%), Gaps = 2/369 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+++ G K G +D+A LFD M E N SW+A+V+G+ G++ A+E ++RM +N+V+
Sbjct: 158 SMVAGLAKAGHLDEAIELFDQMPETNAASWNALVSGFMAQGHLAQAQELFERMPIRNNVS 217
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W+ MI+GY K G+V+ A +FD + D W AM CY QNG A+ A+ ++ M + ++
Sbjct: 218 WITMISGYAKAGDVQAAANLFDRMDSKDLYAWNAMISCYAQNGCAREALGIFNRMLKPHI 277
Query: 242 RIS--EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
++ E ISAC+QLGD+ + + +++ ALI +++K G +D A
Sbjct: 278 WVAPNEKTFSSVISACSQLGDLRFGLWVESFMGYVGVHLDDHLRTALIDLYTKSGQMDRA 337
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F ++++DV+SYS+MI HGK EA+ +F +M I+PN VTF+G+L+A SH
Sbjct: 338 FDLFRGLRSRDVVSYSAMIVGCGMHGKLNEAISLFKEMSKARIDPNAVTFVGLLSAYSHA 397
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GL+E+ F M+ + I P EH T MVD+LGR G+LE+A LIM A WGA
Sbjct: 398 GLLEEARACFTSMSSKYKINPSMEHYTIMVDILGRCGKLEEAFQLIMQIPVCPHASVWGA 457
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL AC++H N ELGE+AA EL P+++G LL NIYA KW + ++ M++E
Sbjct: 458 LLLACRLHNNIELGEVAASKCFELEPKESGYYILLGNIYAQAKKWDKVKGLRKMMAERGL 517
Query: 480 KKSPGCSWI 488
K+PG SW+
Sbjct: 518 SKTPGSSWV 526
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 254/437 (58%), Gaps = 19/437 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQ+FDQIP + W ++I + Q+ L+ + + FT++
Sbjct: 204 LGDARQLFDQIP-VRDLISWNTMISGYAQDGDLSQARRLFEE----SPVRDVFTWT---- 254
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A++ Y + G++D+A+R+FD M ++ +S++ M+AGYA M +E +
Sbjct: 255 ----------AMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELF 304
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M N +W MI+GY + G++ +A+ +FD + + D+ WAA+ Y QNG + A+
Sbjct: 305 EEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMN 364
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
M M+++ ++ A+SAC + +E+ + V ++ V NAL+ M+
Sbjct: 365 MLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYC 424
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG +D A+ F +++KD++S+++M+ +A HG ++AL +F M G++P+++T +G
Sbjct: 425 KCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVG 484
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+ACSH GL + G + F M + +GI P ++H CM+DLLGR+G LE+A +LI +
Sbjct: 485 VLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFE 544
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
DA TWGALLGA ++H N ELGE AA + ++ P +G LL+N+YA+ G+W D ++
Sbjct: 545 PDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMR 604
Query: 472 MMISETEKKKSPGCSWI 488
+ + + +K+PG SW+
Sbjct: 605 LKMRQIGVQKTPGYSWV 621
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 172/349 (49%), Gaps = 31/349 (8%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I + + G D A +FD+M RN +S++AM++GY A++ +D+M K+ +W
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
M+ GY + +R+A+ +FD + E D W AM YV++G+ A +++ M +N
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKN--- 156
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
++ G ++A + G +E A+ + E D N L+ + K L A + F
Sbjct: 157 -SISWNGLLAAYVRSGRLEE----ARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLF 211
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+I +D+IS+++MI+ +A G +A +F E + T+ ++ A G+++
Sbjct: 212 DQIPVRDLISWNTMISGYAQDGDLSQARRLF----EESPVRDVFTWTAMVYAYVQDGMLD 267
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLG--RSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ RVF P ++ V + G + +++ L + F + G+W ++
Sbjct: 268 EA-------RRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMP-FPNIGSWNIMI 319
Query: 422 -GACKVHVNAELGEIAARHLLELGPEKTGNS--ALLANIYASMGKWKDS 467
G C+ N +L + AR+L ++ P++ S A++A YA G ++++
Sbjct: 320 SGYCQ---NGDLAQ--ARNLFDMMPQRDSVSWAAIIAG-YAQNGLYEEA 362
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 165/373 (44%), Gaps = 46/373 (12%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A+I GY + A+ LFD M +++ SW+ M+ GYA ++ A+ +D M EK+ V+
Sbjct: 69 AMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVS 128
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W AM++GY + G V EA+ VFD + ++ W + YV++G + A +++ +
Sbjct: 129 WNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWEL 188
Query: 242 RISEVAMVGAISACTQLGD-------------VEMAAILAKHVDEGCCD----------- 277
IS ++G LGD + +++ + +G
Sbjct: 189 -ISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPV 247
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
R + A+++ + + G LD A R F + K +SY+ MI +A + + ++F +M
Sbjct: 248 RDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEM 307
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG--RS 395
I + G C +G L + +F + P + ++ + G ++
Sbjct: 308 PFPNIGSWNIMISGY---CQNGDLAQ--------ARNLFDMMPQRDSVSWAAIIAGYAQN 356
Query: 396 GQLEKAHSLIMDYK---DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK---TG 449
G E+A +++++ K + + T+ L AC ELG+ ++ G EK G
Sbjct: 357 GLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVG 416
Query: 450 NSALLANIYASMG 462
N+ L +Y G
Sbjct: 417 NA--LVGMYCKCG 427
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 262/483 (54%), Gaps = 19/483 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ +SKT + L Q+H+ L + H ++ Q L L Y+ +F + +
Sbjct: 36 LIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASL----GRLDYSVALFGRT-QN 90
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
+ F WT++I H L Q++ YA+M GV + FTFSS+L C P +A+
Sbjct: 91 PSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPG--KALHS 148
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
K+G FDS ++ + ++ YA G++ +A++ +D M EK+ V+ AM
Sbjct: 149 QAVKLG--------FDS----DLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAM 196
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
+ Y K GE+ A+ +FD + E D CW M Y QNG A+ +++ M + + +E
Sbjct: 197 LTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNE 256
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
V ++ +SAC QLG +E + +++ +V AL+ M+SKCG L+ A F +
Sbjct: 257 VTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDK 316
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
I +KDV++++SMI +A HG SQEAL +F M G+ P +TFIG+L+AC H G V +G
Sbjct: 317 IDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG 376
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
F M +GI+P EH CMV+LLGR+G +E+A+ L+ + D WG LLGAC+
Sbjct: 377 WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACR 436
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H LGE L++ +G LL+NIYA++G W ++ M+ ++ KK PGC
Sbjct: 437 LHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGC 496
Query: 486 SWI 488
S I
Sbjct: 497 SSI 499
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 175/485 (36%), Positives = 267/485 (55%), Gaps = 20/485 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ RSK NQ+ +H+ L++ H Q + L+R + YA ++F Q
Sbjct: 55 LLQRSKHINQVLPIHAQLIRN---GHSQDPFMVFELLRSCS-KCHAIDYASRIF-QYTHN 109
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--V 123
+L+T+LI V ++ +I LY++M +L + +S+L AC +L E V
Sbjct: 110 PNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREV 169
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
K+GL N + ++ Y CG + A+ ++ M E + V
Sbjct: 170 HSRALKLGL------------SSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVAST 216
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
MI+ Y G V EA VF + D CW AM +V+N A+E ++ M+ ENVR
Sbjct: 217 VMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRP 276
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+E +V +SAC+QLG +E+ + ++ + + +V NALI+M+S+CG +D A F
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+K++DVI+Y++MI+ + +GKS++A+++F M + P VTF+GVL ACSHGGLV+
Sbjct: 337 DEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVD 396
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G K F MTR +G++P EH CMVDLLGR G+LE+A+ LI K D G LL A
Sbjct: 397 FGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA 456
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
CK+H N ELGE A+ L + G +G LL+++YAS GKWK++ V+ + E +K P
Sbjct: 457 CKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEP 516
Query: 484 GCSWI 488
GCS I
Sbjct: 517 GCSSI 521
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 249/447 (55%), Gaps = 32/447 (7%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++P+ T W L+ +V + ++ ++ KM V++
Sbjct: 13 ARKLFDKMPETNT-ISWNGLVSGYVQNGMISEARKVFDKMPERNVVS------------- 58
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
A+I GY + GL+++A+ LF M ERNV+SW+ M+ G G + A++ +D M
Sbjct: 59 -----WTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMM 113
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-------------EPDASCWAAMTVCYV 221
K+ V MI G G + EA+++FDE+ E D W+ M Y
Sbjct: 114 PVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYE 173
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
+ G+ A+ ++ +M++E VR S +++ +S C L ++ + + D Y
Sbjct: 174 RKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIY 233
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
VS+ LI M+ KCG L A R F R +KD++ ++S+I +A HG ++AL++F M +
Sbjct: 234 VSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSS 293
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
I P+++TFIGVL+ACS+ G V++G + FE M + + P TEH CMVDLLGR+G+L +A
Sbjct: 294 IAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEA 353
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
+LI + DA WGALLGAC+ H N +L EIAA+ LL+L P G LL+N+Y+S
Sbjct: 354 MNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQ 413
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
+WKD ++ + +KSPGCSWI
Sbjct: 414 SRWKDVVELRKTMRAKNLRKSPGCSWI 440
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 26/233 (11%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
+ GY + +A++LFD M E N ISW+ +V+GY G + A++ +D+M E+N V+W
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
AMI GY + G + EA+ +F + E + W M +++G A +++ +M ++V +
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDV-V 119
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+ M+ + C++ +E I + T+ +S
Sbjct: 120 ASTNMIDGL--CSEGRLIEAREIFDEMPQRNVVAWTSMISG------------------- 158
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
KD ++S+MI + G EAL +F M+ EG+ P+ + I VL+ C
Sbjct: 159 ----EKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVC 207
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 291/549 (53%), Gaps = 78/549 (14%)
Query: 6 LVPRSKTFNQLKQVHSYLL-KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
L+ + + QLKQ+H+ LL ++ KP+ FL ++ L + +YA F I
Sbjct: 38 LLQQCLSIKQLKQIHAQLLTNSIHKPN-------SFLYKIADL--KDFAYASVFFSNILD 88
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSIL---LYAKMHRLGVLTSGFTFSSVLNACARVPSL-- 119
T++ + +IR L + +S L Y++M LG+ + T+ + AC+ + ++
Sbjct: 89 -PTEYSFNVMIRG--LSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVEN 145
Query: 120 -------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
++I Y + G M DA+++FD +++++++SW++M++GY+
Sbjct: 146 GRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSK 205
Query: 161 CGNMKAAKEFYDRMTEKN---------SV-------------TWV--------------- 183
+ A + M E SV TWV
Sbjct: 206 MRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFM 265
Query: 184 --AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
A+I YGKCG++ A+++FD + + D W AM Y QNG ++ AI++++ MR +
Sbjct: 266 GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST 325
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
++ ++G +SAC +G +++ + + E YV AL+ M++KCG LD A+R
Sbjct: 326 APDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFR 385
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG--IEPNQVTFIGVLTACSHG 359
F + K+ +S+++MI+A A HG++QEAL +F M NEG + PN +TF+GVL+AC H
Sbjct: 386 VFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHA 445
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV++G + F +M+ FG+ P EH +CMVDL R+G LE+A +M + D GA
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGA 505
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LLGAC+ N ++ E + LLEL P +GN + + +YA++ +W DS ++M++ +
Sbjct: 506 LLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565
Query: 480 KKSPGCSWI 488
K+PGCSWI
Sbjct: 566 SKTPGCSWI 574
>gi|414587316|tpg|DAA37887.1| TPA: hypothetical protein ZEAMMB73_488455 [Zea mays]
Length = 622
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 270/536 (50%), Gaps = 64/536 (11%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRL--LQLPGDNLSYARQVFDQ-- 61
L+ R T L Q+H+ ++ L H+ + A+F L+ P S+ + D
Sbjct: 88 LLGRCCTVRCLAQLHARII--LLGLHNHHALLARFTTACDALECPSVAASFIAALTDSHA 145
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV----- 116
P + SL R+ LHA + LL R L F+F +L ACARV
Sbjct: 146 APLRLRNAVLASLARHAPLHAALTEFNLL-----RQAALPDSFSFPCLLRACARVSCLPA 200
Query: 117 ---------------------------------------------PSLLE--AVICGYTK 129
PS + A+I Y
Sbjct: 201 GRALHAAAIRLGVHADLFIRTALIQFYGRCGVADAARALFYQIDIPSEVSWTAIIVAYVN 260
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
G + DA+ LFD+M +RNV+ W+ MV GY CG+++ A+ +D M E+ + ++I GY
Sbjct: 261 NGGIIDARALFDTMPQRNVVHWNVMVDGYVKCGDLEGARRLFDEMPERTATACTSLIGGY 320
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
K G + A+ +FD++ + D W+AM Y QNGY A+ + + + + E+ +V
Sbjct: 321 AKAGNMEAARLLFDKLEDRDVFSWSAMISGYAQNGYPGEALRTFDEFQGQGIHPDELVVV 380
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIHMHSKCGYLDLAWREFSRIKN 308
G +SAC+QLG++ +A+ + ++ + D N +V L++M++KCG L+ A F +
Sbjct: 381 GLMSACSQLGNIRLASWIEDYITKYSIDMNNAHVLAGLVNMNAKCGNLERATFLFESMPV 440
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+DV SY S++ + HG + +A+ +F +M EG+ P+ F VLTAC H GLVE+G K
Sbjct: 441 RDVFSYCSLMQGYCLHGSADKAVKLFSRMLLEGLTPDNAVFTIVLTACCHAGLVEEGKKF 500
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F++M V+ + P EH C+V+LLGR G LE A+ LIM G WGALLG CK+H
Sbjct: 501 FDIMKNVYLMVPSGEHYACLVNLLGRCGMLEDAYWLIMSMPGKPHPGAWGALLGGCKLHC 560
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
N ELG+IAA+ L E+ P+ GN L+N+YA++ +W D V+ ++ K G
Sbjct: 561 NIELGKIAAKKLFEIEPDNAGNYVSLSNMYANIDRWGDVSEVRAEMTGKRITKIAG 616
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 279/511 (54%), Gaps = 33/511 (6%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT-LTKPHDQYHYYAQFLIRLLQLPGDNL---SYARQVFDQ 61
L+ K L Q+H+ L+KT L K + + + + L+ DNL +YA+++FD
Sbjct: 37 LLQNCKNPKDLIQLHTLLIKTSLIK---EKYAFGRLLLSFASF--DNLGSLNYAQKLFDT 91
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM--HRLGVLTSGFTFSSVLNACARVPSL 119
+ + F++T++I+ + + R++ Y++M + V + FTF+ V +AC++ +
Sbjct: 92 VDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGV 151
Query: 120 LE---------------------AVICGYTKIGLMDDA-QRLFDSMAERNVISWSAMVAG 157
E +++ Y K+G + +R+FD + +V+SW+ ++ G
Sbjct: 152 FEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLING 211
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
Y G++ A+ +D M E++ V+W M+ GY G + EA +FDE+ + + W+A+
Sbjct: 212 YVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALI 271
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
Y+Q G A+E++K M+ V++ EV + +SAC +LG ++ L ++D+
Sbjct: 272 KGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIK 331
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
++S ALI M+SKCG +D+AW+ F +K V +SSMI A H ++A+++F KM
Sbjct: 332 VDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKM 391
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
GIEP+++T+I +L AC+H GLV+ G + F M KP +H C+VDLLGR+G
Sbjct: 392 IECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGL 451
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
L A ++ D W ALL ACK+H N ELGE R L+++ P+ N L +N+
Sbjct: 452 LHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQNDMNYVLFSNV 511
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
YA++ +W S ++ + +K+PGCS I
Sbjct: 512 YAAVNRWDISGKLRREMKVRGMQKNPGCSSI 542
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 153/455 (33%), Positives = 258/455 (56%), Gaps = 24/455 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVL 110
++ AR++FD++P K W ++I +V +++ L+ KM H+ V ++++++
Sbjct: 251 MAEARELFDRMP-SKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSV-----SWTTII 304
Query: 111 NACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
N RV L EA ++ G + G +D+A ++F + +V+ W++
Sbjct: 305 NGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNS 364
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
M+AGY+ G M A + +M KNSV+W MI+GY + G++ A ++F + E + W
Sbjct: 365 MIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSW 424
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
++ ++QN A++ +M +E + + +SAC L +++ L +++ +
Sbjct: 425 NSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILK 484
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+V NALI M++KCG + A + F I+ D+IS++S+I+ +A +G + +A
Sbjct: 485 SGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKA 544
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F +M +E + P++VTFIG+L+ACSH GL G F+ M F I+PL EH +C+VDLLG
Sbjct: 545 FEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLG 604
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R G+LE+A + + K +AG WG+LLGAC+VH N ELG AA L EL P N
Sbjct: 605 RVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYIT 664
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+N++A G+W++ E V+M++ K PGCSWI
Sbjct: 665 LSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWI 699
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 205/424 (48%), Gaps = 41/424 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++ + +P W ++I + F + ++ +M +++
Sbjct: 126 LEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVS---------- 175
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+++ GYT+ G M A + F+SM ERNV+SW+ MVAGY G++ +A + +
Sbjct: 176 --------YNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLF 227
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+++ N+V+WV M+ G K G++ EA+++FD + + W AM YVQ+ A++
Sbjct: 228 EKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVK 287
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++K M ++ V+ I+ ++G ++ A + + C D T AL+
Sbjct: 288 LFKKMPHKD----SVSWTTIINGYIRVGKLDEARQVYNQMP--CKDIT--AQTALMSGLI 339
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
+ G +D A + FSRI DV+ ++SMI ++ G+ EAL++F +M + N V++
Sbjct: 340 QNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIK----NSVSWNT 395
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+++ + G ++ + F+ M K + + + L + L+ SL+M K+
Sbjct: 396 MISGYAQAGQMDRATEIFQAMRE----KNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEG 451
Query: 412 --CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK---TGNSALLANIYASMGKWKD 466
D T+ L AC ++G ++L+ G GN AL+A +YA G+ +
Sbjct: 452 KKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGN-ALIA-MYAKCGRVQS 509
Query: 467 SEIV 470
+E V
Sbjct: 510 AEQV 513
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 145/300 (48%), Gaps = 33/300 (11%)
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K+G +++A R+F +M +N++++++M++ A ++ A++ +D+M+ +N V+W MIAG
Sbjct: 29 KLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAG 88
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y V EA ++FD + E D WA M CY + G + A E+ +++ + AM
Sbjct: 89 YLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAM 148
Query: 249 VGAISACTQLGD-------------VEMAAILAKHVDEG----------CCDRTNYVS-N 284
+ + Q D V ++LA + G N VS N
Sbjct: 149 IAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWN 208
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
++ + K G L AW+ F +I N + +S+ +M+ A +GK EA ++F +M ++
Sbjct: 209 LMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSK---- 264
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
N V++ ++ V++ K F+ M + T +++ R G+L++A +
Sbjct: 265 NVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVS-----WTTIINGYIRVGKLDEARQV 319
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 25/265 (9%)
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
G ++ A + MT KN VT+ +MI+ K +R+A+++FD++S + W M Y+
Sbjct: 31 GKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYL 90
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA----AILAKHVDEGCCD 277
N + A E++ VM + + + I+ T+ G +E A ++ +D C
Sbjct: 91 HNNMVEEASELFDVMPERD----NFSWALMITCYTRKGKLEKARELLELVPDKLDTACW- 145
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
NA+I ++K G + A + F ++ KD++SY+SM+ + +GK AL F M
Sbjct: 146 ------NAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESM 199
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
E N V++ ++ G + + FE + + +T M+ L + G+
Sbjct: 200 ----TERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVT-----MLCGLAKYGK 250
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLG 422
+ +A L D + +W A++
Sbjct: 251 MAEARELF-DRMPSKNVVSWNAMIA 274
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 276/547 (50%), Gaps = 82/547 (14%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFDQIPKCKT 67
K+ +Q KQ H LL+ L D Y LI LL L YA VF Q P
Sbjct: 14 KSLHQAKQCHCLLLR-LGLHQDTY------LINLLLRSSLHFAATQYATVVFAQTPH-PN 65
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE------ 121
FL+ +LIR V + FR ++ +YA M + G FTF VL AC R+P
Sbjct: 66 IFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLH 125
Query: 122 ----------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------- 158
++C Y+K G + DA+++FD + E+NV+SW+A++ GY
Sbjct: 126 SLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFG 185
Query: 159 ----------------------------ANCGNMKAAKEFYDRMTEKNSVTWV----AMI 186
+ G++ + + M E SV V +++
Sbjct: 186 EALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLV 245
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
Y KCG + EA++VFD + E D CW+A+ Y NG K A++++ M++ENVR
Sbjct: 246 DMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCY 305
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN-----ALIHMHSKCGYLDLAWR 301
AMVG SAC++LG +E+ + G D ++SN ALI ++KCG + A
Sbjct: 306 AMVGVFSACSRLGALELG-----NWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKE 360
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F ++ KD + ++++I+ A G A +F +M G++P+ TF+G+L C+H GL
Sbjct: 361 VFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGL 420
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V+DG + F M+ VF + P EH CMVDL R+G L +A LI ++ WGALL
Sbjct: 421 VDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALL 480
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
G C++H + +L E + L+EL P +G+ LL+NIY++ +W ++E ++ +++ +K
Sbjct: 481 GGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQK 540
Query: 482 SPGCSWI 488
PGCSW+
Sbjct: 541 LPGCSWV 547
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 272/494 (55%), Gaps = 29/494 (5%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
+ N LKQ+ +L+ + H Q ++A L+R L +L YAR +FD +
Sbjct: 52 KCSNLNHLKQLQGFLI---SHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNV- 107
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL-TSGFTFSSVLNACARVPSLLEAVICGY 127
FL+T++I + + + + LLY M R G + + F + VL +C P +L +
Sbjct: 108 FLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSC---PDVLGS---NA 161
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-CGNMKAAKEFYDRMTEKNSVTWVAMI 186
TK M Q L V+ +A+V Y+ ++ +A++ +D M E+ V+W AMI
Sbjct: 162 TK---MVHTQVLKSGFGGYPVVQ-TAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMI 217
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM---------- 236
+GY + G A ++F+ + E D W A+ QNG+ AI ++K M
Sbjct: 218 SGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNN 277
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+EN + ++ + A+SAC G + + + +V + + +++SNAL+ M+ KCG L
Sbjct: 278 DREN-KPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNL 336
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN--EGIEPNQVTFIGVLT 354
+A R F I K++ S++S+I A HG S A+D+F ++ + +G++PN+VTF+GVL
Sbjct: 337 KVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLN 396
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC+HGGLVE G FE+M R + I+P EH C++DLLGR+G+ E+A ++ D
Sbjct: 397 ACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDE 456
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
WG+LL ACK+H ++L E + + L+E+ P+ G +LANIYA GKW + V+ ++
Sbjct: 457 VVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLL 516
Query: 475 SETEKKKSPGCSWI 488
E K+PGCSWI
Sbjct: 517 KEKNAYKTPGCSWI 530
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/505 (32%), Positives = 274/505 (54%), Gaps = 33/505 (6%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
+SK+ + K++H + LK + + + L L + + AR++FD+IP +
Sbjct: 20 QSKSLTEAKKIHQHFLKNTSNADSSVLHK----LTRLYLSCNQVVLARRLFDEIPN-PSV 74
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV----- 123
LW +IR + + F +I LY M LGV + +T+ VL AC+ + ++ + V
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 124 -----------ICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
+C Y K G++ +AQRLF SM+ R+V++W+AM+AG + G A
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194
Query: 168 KEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+ +M E+ NS T V ++ C + A+K+FD + + W+AM YV +
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLP---TCQCLLYARKIFDVMGVRNEVSWSAMIGGYVAS 251
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
K A++++++M+ + M+G + AC+ L ++ ++ +
Sbjct: 252 DCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLIC 311
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
NALI M+SKCG + A F+R+ D++S+++MI + HG EAL +F + G++
Sbjct: 312 NALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLK 371
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
P+ +TFI +L++CSH GLV +G F+ M+R F I P EH CMVD+LGR+G +++AH
Sbjct: 372 PDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHH 431
Query: 404 LIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGK 463
I + D W ALL AC++H N ELGE ++ + LGPE TGN LL+NIY++ G+
Sbjct: 432 FIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGR 491
Query: 464 WKDSEIVKMMISETEKKKSPGCSWI 488
W D+ +++ + KK PGCSWI
Sbjct: 492 WDDAAHIRITQKDWGLKKIPGCSWI 516
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ AC Q + A + +H + + + V + L ++ C + LA R F I N V
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
I ++ +I A+A +G A+D++ M + G+ PN+ T+ VL ACS +EDG +
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV-EIHS 133
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVH 427
++FG++ T +VD + G L +A L M ++D W A++ C ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV---AWNAMIAGCSLY 188
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/569 (31%), Positives = 273/569 (47%), Gaps = 104/569 (18%)
Query: 23 LLKTLTKPHDQYHYYAQFLIRLLQLPGD---------NLSYARQVFDQIPKCKTQFLWTS 73
LL+T T + +AQ LI L L ++ YAR V DQ P T F W S
Sbjct: 5 LLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHSIDYARFVLDQTPS-PTDFSWNS 63
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE------------ 121
LIR + +H + S+ LY KM R S FTF VL AC+ + S+LE
Sbjct: 64 LIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLG 123
Query: 122 ----------------------------------------AVICGYTKIGLMDDAQRLFD 141
++I GY + G ++ A+ LF+
Sbjct: 124 FGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFE 183
Query: 142 SMA-ERNVISWSAMVAGYANCGNMKAAKEFYDRM------TEKNSVTWV----------- 183
M RNV+ W+AM+ GY G+ + +M + N+ T V
Sbjct: 184 EMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCN 243
Query: 184 ------------------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
A+I Y KCG+V +A ++FD +S + W A+
Sbjct: 244 YEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITG 303
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
VQ G + AI++Y+ M+ ++V+ +E+ +V +SAC LG +E+ + ++ D
Sbjct: 304 CVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLN 363
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
++ AL+ M++KCG +D A F + KDV +++MI A HG +++L +F +M
Sbjct: 364 VILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVR 423
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
G++PN VTFIGVL+AC+H GLVE+G QF M G+ P EH CMVDLLGR+G L+
Sbjct: 424 AGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLK 483
Query: 400 KAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYA 459
+A+ L+ + D+ WGALL AC++H N EL + + ++ G LL+NIYA
Sbjct: 484 EAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYA 543
Query: 460 SMGKWKDSEIVKMMISETEKKKSPGCSWI 488
S G+WKD V+ + E KK GCSW+
Sbjct: 544 SSGRWKDVARVRRQVKEKRIKKPSGCSWV 572
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 258/462 (55%), Gaps = 24/462 (5%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG--FTFSS 108
NL ++ +F+ F + +L++ H + +I + L + +TF+S
Sbjct: 73 NLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTS 132
Query: 109 VLNACARVPSLLEA--VICGYTKIGLMDD-------------------AQRLFDSMAERN 147
VL ACA + +LE V C TK G + AQ+LFD M R+
Sbjct: 133 VLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRD 192
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
V+SW+ +++GY G + A+ +D M EKN V+W MI+GY + G + EA+++F+ +
Sbjct: 193 VVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPM 252
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAI 266
+ W AM Y QN AIE+++ M+ E + ++V +V +SAC LG +++
Sbjct: 253 RNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKW 312
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ + + + ++ NAL M++KCG + A F + +DVIS+S +I A +G
Sbjct: 313 IHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGY 372
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+ EA + F +M +G+EPN ++F+G+LTAC+H GLV+ G + F++M +V+GI P EH
Sbjct: 373 ANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYG 432
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
C+VDLL R+G+L++A SLI + WGALLG C+++ +AE GE +LEL
Sbjct: 433 CVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSN 492
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+G+ LAN+YASMG+ D+ ++ + + + K+PGCSWI
Sbjct: 493 HSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWI 534
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 270/477 (56%), Gaps = 19/477 (3%)
Query: 15 QLKQVHSYLL--KTLTKPHDQYHYYAQFLIRLLQLPGD-NLSYARQVFDQIPKCKTQFLW 71
+KQ+ S+L TL P + A +I + ++S+A +F +P+ +T F+W
Sbjct: 3 HIKQIQSHLTVSGTLFDP-----FAAGRIISFCAVSAQGDISHAYLLFLSLPR-RTSFIW 56
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
+++R + LY M G L + +TFS +L ACA++ L G
Sbjct: 57 NTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDL---------SFG 107
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
++ AQ + + + + ++ YA+C M +A+ +D ++ VTW A+I GY K
Sbjct: 108 ILLHAQAVRLGWEAYDFVQ-NGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAK 166
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
G+V A+++FDE+ E +A W+AM Y Q G + A+E++ M+ R + A+VGA
Sbjct: 167 SGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGA 226
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
++AC LG ++ + +VD + ALI M++KCG ++ A R F + ++DV
Sbjct: 227 LTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDV 286
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+++S+I+ A+HG S A++MF +M+NEG+ PN+VTFI +L+ACS GLVE+G + F+
Sbjct: 287 FAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKS 346
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
MT ++GI+P+ +H C+VDLLGR+G LE A ++ + D+ GALL AC+VH + E
Sbjct: 347 MTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVE 406
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LG+ L E + G LL+N+YAS +W+D V+ + E + KK PGCS I
Sbjct: 407 LGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLI 463
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 271/486 (55%), Gaps = 15/486 (3%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGD-NLSYARQVFDQIP 63
+L+ R +L+Q+H +LKT + A L+ P +L+YAR VFD+I
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGLILDE---IPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV 123
+ T F+W ++IR + +++LLY M V + +TF +L AC+ + S LE
Sbjct: 80 RPNT-FMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM-SALEET 137
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
+ I M ++ + + NV Y+ G++K+A+ +D++ ++++V+W
Sbjct: 138 QQIHAHIIKMGFGSEIYTTNSLLNV---------YSKSGDIKSARLLFDQVDQRDTVSWN 188
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+MI GY KCGE+ A ++F+ + E + W +M V G K A+ ++ M+ +++
Sbjct: 189 SMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKL 248
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
VA+V + AC LG ++ + ++ + + + LI M++KCG L+ A F
Sbjct: 249 DNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVF 308
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+++ K V +++MI+ +A HG+ +EAL+ F+KM+ G+EPNQ+TF G+LTACSH GLV
Sbjct: 309 RKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVH 368
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ FE M R+ G KP EH CMVDLLGR+G L++A LI + +A WGALL A
Sbjct: 369 EAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C +H N ELG+ + L+++ P G LA+I+A+ G+W + V+ + E K P
Sbjct: 429 CHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLP 488
Query: 484 GCSWIS 489
GCS IS
Sbjct: 489 GCSVIS 494
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 272/543 (50%), Gaps = 73/543 (13%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
K K H LL+ L HD ++R +N Y VF + P FL
Sbjct: 15 KCLKHAKLAHCRLLR-LNLHHDND--LLSIILRSTINFSNNAQYPILVFHKTPTNSNTFL 71
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR---------VPSLL- 120
+ ++IR V F ++ LYA MH+ ++ FTFS VL ACAR + SL+
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131
Query: 121 -----------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
V+C Y+K G + DA ++FD M +NV+SW+ M+ G G + A +
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 170 FYD----------------------RMTEKNSVTWV-----------------AMIAGYG 190
+ R+ + S W+ +++ Y
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYT 251
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
KCG + EA+ VFD + E D CW+AM Y NG + AIE++ MR+ NVR AMVG
Sbjct: 252 KCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVG 311
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN-----ALIHMHSKCGYLDLAWREFSR 305
A+S+C LG +E+ + +G + ++SN +LI ++KCG ++ A +
Sbjct: 312 ALSSCASLGALELG-----NWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKM 366
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+K KD + ++++I+ A +G+ A +F +M GI PN+ TF+G+L C+H GLV+DG
Sbjct: 367 MKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDG 426
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
F M+ F + P EH CMVDLL R+G L++AH+LI + WG+LLG C+
Sbjct: 427 RHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCR 486
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H +L E + L+EL P +G+ LL+NIY++ +W ++E ++ ++E +K PG
Sbjct: 487 LHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGY 546
Query: 486 SWI 488
SW+
Sbjct: 547 SWV 549
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 273/527 (51%), Gaps = 50/527 (9%)
Query: 11 KTFNQLKQVHSYLLK--------------TLTKPHDQYHYYAQFLIRLLQLPGDNL---- 52
KT LKQVH+ ++ + P + YA+ + LQ P +L
Sbjct: 107 KTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSL 166
Query: 53 ----SYARQVFDQIPKCKTQFLWTSLIRNH-----VLHAHFRQSILLYAKMHRLGVLTSG 103
S ++ + +P T L + L +H V+ A S+ + + V+ SG
Sbjct: 167 IRALSSSKTPLEALPLYHT-MLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSG 225
Query: 104 FTFSS---------------------VLNAC-ARVPSLLEAVICGYTKIGLMDDAQRLFD 141
F S + N C AR A+I GY K M A+ +FD
Sbjct: 226 FECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFD 285
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKV 201
M R+VISW+ M+ GYA G + AK +D M E+N V+W +M+AG+ KCG V +A +
Sbjct: 286 RMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGL 345
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
F E+ D W +M CY Q G A+ ++ MR V+ +E +V +SAC LG +
Sbjct: 346 FSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGAL 405
Query: 262 EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
+ L ++++ + + V AL+ M++KCG + LA + F+ +++KDV++++++I
Sbjct: 406 DKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGM 465
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
A HG +EA +F +M+ G+EPN +TF+ +L+ACSH G+V++G K + M+ +GI+P
Sbjct: 466 AIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPK 525
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
EH C++DLL R+G LE+A LI + GALLG C++H N ELGE+ + L+
Sbjct: 526 VEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLI 585
Query: 442 ELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L P +G LL+NIYA+ KW D+ V+ ++ K PG S I
Sbjct: 586 NLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVI 632
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 269/482 (55%), Gaps = 19/482 (3%)
Query: 12 TFNQLKQVHSYLLKT-LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
T +LKQ HS +++ L+ +D +F + GD L+YA +VFD+IP ++
Sbjct: 32 TMAELKQYHSQIIRLGLSADNDAMGRVIKFCA--ISKSGD-LNYALEVFDKIPH-PDAYI 87
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICGYT 128
+ ++ R ++ R I +Y++M V + FT+ ++ AC ++ E +
Sbjct: 88 YNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVL 147
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K G D S + ++ Y N +++ A+ +D M +++ V+W ++I G
Sbjct: 148 KFGFGADG------------FSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITG 195
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y + G V +A++VF+ + E ++ W AM YVQ+ A ++ MR ENV + +
Sbjct: 196 YSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 255
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+SACT LG +E + ++++ + + ++ +I M+ KCG L+ A F+ +
Sbjct: 256 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 315
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
K + S++ MI A HGK + A+++F +M E + P+ +TF+ VL+AC+H GLVE+G
Sbjct: 316 KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHY 375
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F+ MT V G+KP EH CMVDLLGR+G LE+A LI + DAG GAL+GAC++H
Sbjct: 376 FQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHG 435
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N ELGE + ++EL P +G LLAN+YAS G+W+D V+ ++++ KK+PG S I
Sbjct: 436 NTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMI 495
Query: 489 SS 490
S
Sbjct: 496 ES 497
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 282/484 (58%), Gaps = 17/484 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGD-NLSYARQVFDQIPK 64
L+ + +T +Q+KQ+HS+L+ + ++ + A +I L + + ++S+A ++F +P
Sbjct: 16 LLEQCRTMSQIKQMHSHLIVSASRLDP---FAAGKIISLFAVSSNADISHAYKLFLSLPH 72
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI 124
+T F+W ++IR V ++ LY M + G L + +TFS VL AC
Sbjct: 73 -RTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACT---------- 121
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
+ +GL AQ + + + + ++ YAN +++AA++ +D T ++ +TW A
Sbjct: 122 -DNSPVGLASHAQVIKLGWESYDFV-LNGLIHLYANWSSVEAARKLFDVSTCRDVITWTA 179
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I GY K G V A+++FD++ E + W+AM YV G + A+E++ ++ +R +
Sbjct: 180 LINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPN 239
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+VGA++AC+ LG ++ + +VD + + AL+ M++KCG +++A F
Sbjct: 240 HAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFE 299
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
++ +KD +++S+I+ A+HG+S +A+ +F +M++E + PN+VTFI VL+ACS GLV++
Sbjct: 300 KMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDE 359
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G + F M+ V+GI+P +H CMVDLLGR+G LE+A L+ + D+ GALL +C
Sbjct: 360 GLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSC 419
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
+VH + ELG+ L+E G + G LL+N+YAS +W V+ + + KK PG
Sbjct: 420 RVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPG 479
Query: 485 CSWI 488
CS I
Sbjct: 480 CSSI 483
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 253/437 (57%), Gaps = 19/437 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQ+FD++P + W ++I + Q+ L+ + + FT++
Sbjct: 217 LGDARQLFDRMP-VRDVISWNTMISGYAQVGDLSQAKRLFNE----SPIRDVFTWT---- 267
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A++ GY + G++D+A++ FD M +N IS++AM+AGY M A E +
Sbjct: 268 ----------AMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELF 317
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M +N +W MI GYG+ G + +A+K+FD + + D WAA+ Y QNG+ + A+
Sbjct: 318 EAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALN 377
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
M+ M+++ + A+S C + +E+ + V + + +V NAL+ M+
Sbjct: 378 MFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYF 437
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG D A F I+ KDV+S+++MI +A HG ++AL +F M+ G++P+++T +G
Sbjct: 438 KCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVG 497
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+ACSH GL++ G + F M R + +KP ++H TCM+DLLGR+G+LE+A +L+ +
Sbjct: 498 VLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFD 557
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
A +WGALLGA ++H N ELGE AA + ++ P+ +G LL+N+YA+ G+W D ++
Sbjct: 558 PGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMR 617
Query: 472 MMISETEKKKSPGCSWI 488
+ E +K G SW+
Sbjct: 618 SKMREAGVQKVTGYSWV 634
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 150/316 (47%), Gaps = 23/316 (7%)
Query: 109 VLNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
V N+ R S+ A+I GY + A+ LFD M ER++ SW+ M+ GY + A
Sbjct: 68 VFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEA 127
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+ +D M +K+ V+W AM++GY + G V EA++VF+++ ++ W + YV NG K
Sbjct: 128 HKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLK 187
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A +++ + IS ++G LGD A+ + + R N +I
Sbjct: 188 EARRLFESQSNWEL-ISWNCLMGGYVKRNMLGD-------ARQLFDRMPVRDVISWNTMI 239
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
+++ G L A R F+ +DV ++++M++ + +G EA F +M + N++
Sbjct: 240 SGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK----NEI 295
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE--HLTCMVDLLGRSGQLEKAHSLI 405
++ +L G V+ K+ + +F P M+ G++G + +A L
Sbjct: 296 SYNAMLA-----GYVQ--YKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLF 348
Query: 406 MDYKDFCDAGTWGALL 421
D D +W A++
Sbjct: 349 -DMMPQRDCVSWAAII 363
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 117/253 (46%), Gaps = 35/253 (13%)
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
++++W+ ++ + G+ +A ++ M ++SV++ AMI+GY + + A+ +FD++
Sbjct: 45 DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-- 264
E D W M YV+N A +++ +M +++V V+ +S Q G V+ A
Sbjct: 105 ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDV----VSWNAMLSGYAQNGFVDEARE 160
Query: 265 --------------AILAKHVDEGCCDRTNYVS-----------NALIHMHSKCGYLDLA 299
+LA +V G + N L+ + K L A
Sbjct: 161 VFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDA 220
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F R+ +DVIS+++MI+ +A G +A +F NE + T+ +++
Sbjct: 221 RQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLF----NESPIRDVFTWTAMVSGYVQN 276
Query: 360 GLVEDGCKQFELM 372
G+V++ K F+ M
Sbjct: 277 GMVDEARKYFDEM 289
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+ + + VTW I+ + + G A +VF+ + + + AM Y++N A ++
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDL 99
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHS 291
+ M + ++ V + G + +LG+ L D VS NA++ ++
Sbjct: 100 FDKMPERDLFSWNVMLTGYVRN-RRLGEAHKLFDLMPKKD--------VVSWNAMLSGYA 150
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
+ G++D A F+++ +++ IS++ ++ A+ +G+ +EA +F N
Sbjct: 151 QNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSN 198
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 269/493 (54%), Gaps = 32/493 (6%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
+F L ++H+ + + Q +Y L+ L G +L A++VF+ I T +W
Sbjct: 39 SFRNLAKIHA---QIVVSGFSQKNYILNHLLSLYISFG-SLGSAQKVFEDITAPSTT-VW 93
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-VICGYTKI 130
+I+ H ++SI L+ +M GV +GFT+S +L+AC R E I G
Sbjct: 94 NQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHG---- 149
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGN-----MKAAKEFYDRMTEKNSVTWVAM 185
R+ + N+ + ++ YAN G+ +K A+ +D M + N V W ++
Sbjct: 150 -------RVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSL 202
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
+AGY + G+ A+KVFDE+ E + W M + QNG K A+ ++ MR+ V + +
Sbjct: 203 LAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQ 262
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV----SNALIHMHSKCGYLDLAWR 301
VA+V A+SAC +LGD+ + + +V+ R V +NALIHM++ CG +DLA++
Sbjct: 263 VALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYK 322
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG---IEPNQVTFIGVLTACSH 358
F I ++ +S+SS+IT FA G EA+ +F M G + P+++TFIG LTACSH
Sbjct: 323 VFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSH 382
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL+ DG + F+ M + FG+ P EH CMVDLL R+G L +A SLI + WG
Sbjct: 383 AGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWG 442
Query: 419 ALLGACKVHVNAELGEIAARHL-LELGP--EKTGNSALLANIYASMGKWKDSEIVKMMIS 475
ALL C++H N E+ A+HL E+ P + G LLAN+YA+ G+W+D+ V+ +
Sbjct: 443 ALLSGCRLHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMH 502
Query: 476 ETEKKKSPGCSWI 488
+ KK G SWI
Sbjct: 503 DIGVKKPSGRSWI 515
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/487 (33%), Positives = 251/487 (51%), Gaps = 54/487 (11%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +VFDQIP+ +W ++ R + + + I+L+ +M L V+ + FTF +L +C
Sbjct: 4 AHKVFDQIPEPNAS-IWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCV 62
Query: 115 RVPSLLEA---------------------VICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
++ +L E +I Y G + A R+F M ERNVI+W+A
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
M+ GY C ++ A+ +D E++ V W MI+GY + +V A+++FD++ D W
Sbjct: 123 MINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSW 182
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVR--------------ISEV------------- 246
+ Y NG A +++ M + NV SEV
Sbjct: 183 NTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTV 242
Query: 247 -----AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+V +SAC +LG +++ + + + YV NAL+ M++KCG ++ A
Sbjct: 243 VPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALD 302
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F + NKD+IS++++I A HG +AL++F M+ G P+ +TFIG+L AC+H GL
Sbjct: 303 VFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGL 362
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
VEDG F+ MT + I P EH C+VDLLGR+G L A I DA W ALL
Sbjct: 363 VEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALL 422
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC+V+ N EL E+A L+E P+ N +L+NIY G+WKD +K+ + +T KK
Sbjct: 423 GACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKK 482
Query: 482 SPGCSWI 488
PGCS I
Sbjct: 483 LPGCSLI 489
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 134/337 (39%), Gaps = 54/337 (16%)
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYA--------------------------------N 160
M++A ++FD + E N W+AM GY+ +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 161 CGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
C + A KE N +I Y G + A +VF E+ E + W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
AM Y+ A ++ + + ++ + + G I A DV I A+ + +
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEA----KDV----IRARELFD 172
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
++ N +++ ++ G + R F + ++V S++++I + +G E L
Sbjct: 173 KMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSA 232
Query: 334 FLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
F +M +G + PN T + VL+AC+ G ++ G K + G K ++D+
Sbjct: 233 FKRMLVDGTVVPNDATLVNVLSACARLGALDLG-KWVHVYAESHGYKGNVYVRNALMDMY 291
Query: 393 GRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVH 427
+ G +E A + MD KD +W ++G VH
Sbjct: 292 AKCGVVETALDVFKSMDNKDLI---SWNTIIGGLAVH 325
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 272/504 (53%), Gaps = 28/504 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ-LPGDNLSYARQVFDQIPKCKTQF 69
K+ LKQ+H+ ++KT+ P Q + Q LP D YA + Q+ +
Sbjct: 48 KSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDP-RYALSLLAQL-RTPNLP 105
Query: 70 LWTSLIRNHVLHAHFR-QSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICG 126
L+ ++IR + + +++Y +M G++ +T VL ACA ++ E V
Sbjct: 106 LYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQ 165
Query: 127 YTKIGLMDD-------------------AQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
K+GL D A+++FD+ +R+++SW+ M+ GY G +
Sbjct: 166 AIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREG 225
Query: 168 KEFYD-RMTEKNSVTWV--AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
Y R + N +V A++ Y KCG+ A+KVF E+ + W +M Q G
Sbjct: 226 VGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKG 285
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN 284
K ++ M++ M++ V+ +V +V +++C LG +E+ + ++D ++ N
Sbjct: 286 QFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGN 345
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
AL+ M++KCG +D A F + KDV SY++MI A HG+ +ALD+F +M GIEP
Sbjct: 346 ALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEP 405
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
++VTF+GVLTACSH GLVE+G K FE M+ ++ ++P EH CMVDLLGR+G + +A
Sbjct: 406 DEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEF 465
Query: 405 IMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKW 464
I + DA GALLGACK+H ELGE + + ++ P K G L++NIY+S +W
Sbjct: 466 IRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRW 525
Query: 465 KDSEIVKMMISETEKKKSPGCSWI 488
+D+ ++ + E +K+PGCS I
Sbjct: 526 RDALKLRKTMKERNLEKTPGCSSI 549
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/547 (31%), Positives = 282/547 (51%), Gaps = 74/547 (13%)
Query: 6 LVPRSKTFNQLKQVHS-YLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
L+ + + L+Q+H+ ++ + KP+ H R + L + + A +F QIP
Sbjct: 37 LLKQCTSTKSLQQIHTQMIINAIHKPNFLLH-------RFIDLK--DFNNASLLFSQIPY 87
Query: 65 CKTQFLWTSLIRN-HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV------- 116
++ + +IR F +I Y +M G+ + FT+ V ACA +
Sbjct: 88 -PNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQ 146
Query: 117 ---PSLLEAVICG-----------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
+L++ +C Y++ G + A+R+FD ++E++++SW++M++GY+ G
Sbjct: 147 CAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMG 206
Query: 163 ----------NMKAAKEFYDRMT-----------------------------EKNSVTWV 183
M+ A D MT + NS
Sbjct: 207 YAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGS 266
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
A+I YGKCG++ A++VFD + + D W AM Y QNG + AI ++ MR+ V
Sbjct: 267 ALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNP 326
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
++ +VG +SAC +G ++ L + E YVS ALI M++KCG LD A R F
Sbjct: 327 DKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVF 386
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG--IEPNQVTFIGVLTACSHGGL 361
+ K+ +S+++MI+A A HG+ QE+L +F +M EG + PN ++FIGVL+AC H GL
Sbjct: 387 EDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGL 446
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + F+LM+ FG+ P EH +CMVDLL R+G + +A I + D GALL
Sbjct: 447 VDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALL 506
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC+ N ++ E LLE+ P +GN + + I+A+M +W DS +++++ + K
Sbjct: 507 GACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTK 566
Query: 482 SPGCSWI 488
+PGCSWI
Sbjct: 567 TPGCSWI 573
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 259/475 (54%), Gaps = 39/475 (8%)
Query: 45 LQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFR-----QSILLYAKMHRLGV 99
L +PG L YA ++FD+IPK I NHVL + +++ LY +M + GV
Sbjct: 56 LSVPG-ALKYAHKLFDEIPKPDVS------ICNHVLRGSAQSMKPEKTVSLYTEMEKRGV 108
Query: 100 LTSGFTFSSVLNACARVP---------------------SLLEAVICGYTKIGLMDDAQR 138
+TF+ VL AC+++ + A+I + G + A
Sbjct: 109 SPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASE 168
Query: 139 LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREA 198
LFD A+ + ++WS+M +GYA G + A +D M K+ V W MI G KC E+ A
Sbjct: 169 LFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSA 228
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+++FD +E D W AM YV GY K A+ ++K MR V ++ +SAC L
Sbjct: 229 RELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVL 288
Query: 259 GDVEMAAILAKHVDE-GCCDRTNYVS----NALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
GD+E L ++ E + YV NALI M++KCG +D A F +K++D+ +
Sbjct: 289 GDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLST 348
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++++I A H ++ +++MF +M+ + PN+VTFIGV+ ACSH G V++G K F LM
Sbjct: 349 WNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMR 407
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
++ I+P +H CMVD+LGR+GQLE+A + K +A W LLGACK++ N ELG
Sbjct: 408 DMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELG 467
Query: 434 EIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ A LL + +++G+ LL+NIYAS G+W + V+ M +T KK G S I
Sbjct: 468 KYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/478 (33%), Positives = 265/478 (55%), Gaps = 46/478 (9%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-----SGFTFSSV 109
AR+VFD +P+ + WTS++R +V ++ L+ +M R V++ G S
Sbjct: 102 ARKVFDVMPE-RNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESR 160
Query: 110 LNACAR----VPS----LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
++ + +P ++ +I GY ++G +D+A+ LFD M RNV +W+ MV+GYA
Sbjct: 161 IDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKN 220
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGY-------------------------------G 190
G + A++ ++ M E+N V+W AM+ GY G
Sbjct: 221 GRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFG 280
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
GE+ A+ +F+ + E D W AM + + G A+ ++ M++E V ++ +M+
Sbjct: 281 LAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMIS 340
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+S C L ++ + + D+ YV++ LI M+ KCG L A F+R KD
Sbjct: 341 VLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKD 400
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
V+ ++SMIT ++ HG +EAL++F M + G++P++VTFIGVL+ACS+ G V++G + FE
Sbjct: 401 VVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFE 460
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
M + ++P EH CMVDLLGR+G++++A L+ DA WGALLGAC+ H+
Sbjct: 461 AMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKL 520
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L E+A L +L P+ G LL+++YA+ G+W+D E+++ I+ K PGCSWI
Sbjct: 521 DLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINR-RVIKFPGCSWI 577
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 150/339 (44%), Gaps = 58/339 (17%)
Query: 51 NLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
++ AR+VFD P +T W +++ + R ++LL+ +M + ++
Sbjct: 34 DIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVS-------- 85
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+I GY K G++ DA+++FD M ERNV+SW++MV GY G ++ A++
Sbjct: 86 ----------FNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEK 135
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC----------------- 212
+ M +N V+W MI G K + +AKK+FD I E D
Sbjct: 136 LFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEA 195
Query: 213 --------------WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
W M Y +NG A ++++VM + N EV+ + TQ
Sbjct: 196 RELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERN----EVSWTAMLMGYTQS 251
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G ++ A L E + N +I G + A F +K +D ++++MI
Sbjct: 252 GRMKEAFELF----EAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMI 307
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
F G EAL +F +M+ EG+ N + I VL+ C+
Sbjct: 308 KVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCA 346
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 63/304 (20%)
Query: 173 RMTEKNSV-TWVAMIAGYGKCGEVREAKKVFDEISEPDAS--CWAAMTVCYVQNGYAKAA 229
RM + S+ + + I+ YG+ G++ A+KVFD P + W AM Y ++ + A
Sbjct: 12 RMVQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDA 71
Query: 230 IEMYKVMRQENV-----RISEVAMVGAISACTQLGD-------VEMAAILAKHVDEGCCD 277
+ ++ M Q N IS G ++ ++ D V +++ +V EG +
Sbjct: 72 LLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVE 131
Query: 278 ----------RTNYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
R N VS +I K +D A + F I KDV+ ++MI + G+
Sbjct: 132 EAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGR 191
Query: 327 SQEALDMFLKMRNEGI---------------------------EPNQVTFIGVLTACSHG 359
EA ++F +M+ + E N+V++ +L +
Sbjct: 192 LDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQS 251
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
G +++ + FE M P+ + C M+ G +G++ +A + K+ D GTW
Sbjct: 252 GRMKEAFELFEAM-------PVKWIVACNEMILQFGLAGEMHRARMMFEGMKER-DEGTW 303
Query: 418 GALL 421
A++
Sbjct: 304 NAMI 307
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 259/475 (54%), Gaps = 39/475 (8%)
Query: 45 LQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFR-----QSILLYAKMHRLGV 99
L +PG L YA ++FD+IPK I NHVL + +++ LY +M + GV
Sbjct: 22 LSVPG-ALKYAHKLFDEIPKPDVS------ICNHVLRGSAQSMKPEKTVSLYTEMEKRGV 74
Query: 100 LTSGFTFSSVLNACARVP---------------------SLLEAVICGYTKIGLMDDAQR 138
+TF+ VL AC+++ + A+I + G + A
Sbjct: 75 SPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASE 134
Query: 139 LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREA 198
LFD A+ + ++WS+M +GYA G + A +D M K+ V W MI G KC E+ A
Sbjct: 135 LFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSA 194
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+++FD +E D W AM YV GY K A+ ++K MR V ++ +SAC L
Sbjct: 195 RELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVL 254
Query: 259 GDVEMAAILAKHVDE-GCCDRTNYVS----NALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
GD+E L ++ E + YV NALI M++KCG +D A F +K++D+ +
Sbjct: 255 GDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLST 314
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++++I A H ++ +++MF +M+ + PN+VTFIGV+ ACSH G V++G K F LM
Sbjct: 315 WNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMR 373
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
++ I+P +H CMVD+LGR+GQLE+A + K +A W LLGACK++ N ELG
Sbjct: 374 DMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELG 433
Query: 434 EIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ A LL + +++G+ LL+NIYAS G+W + V+ M +T KK G S I
Sbjct: 434 KYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 488
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 254/449 (56%), Gaps = 14/449 (3%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
LI L L G+ +S AR VFD+ K W +I + F +S+ L+ +M R+ VL
Sbjct: 160 LIHLYSLSGE-VSVARGVFDRSSKGDV-VTWNVMISGYNRSKQFDESMKLFDEMERMRVL 217
Query: 101 TSGFTFSSVLNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
S T SVL+AC+++ L + + Y K D E + +A++ YA
Sbjct: 218 PSSITLVSVLSACSKLKDLNVGKRVHRYVK-----------DLKIEPVRVLENALIDMYA 266
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
CG+M A +D M ++ ++W A++ G+ G+V A+ FD++ E D W AM
Sbjct: 267 ACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDG 326
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
Y+Q K + +++ M+ N++ E MV ++AC LG +E+ + ++D+
Sbjct: 327 YLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKID 386
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
++V NALI M+ CG ++ A R F+ + ++D IS++++I A +G +EALDMF +M
Sbjct: 387 SFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLK 446
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
I P++VT IGVL AC+H G+V+ G K F MT GI+P H CMVDLLGR+G L+
Sbjct: 447 ASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLK 506
Query: 400 KAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYA 459
+AH +I + ++ WG+LLGAC+VH + E+ E+AA+ +LEL PE LL NIYA
Sbjct: 507 EAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYA 566
Query: 460 SMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ +W+ V+ ++ + KK+PGCS I
Sbjct: 567 ACNRWEKLHEVRKLMMDRGIKKTPGCSLI 595
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 179/394 (45%), Gaps = 81/394 (20%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
L+ K+ QLKQ+HS + T ++ P AQ + + ++ YAR VFD +P
Sbjct: 25 LIKTCKSMAQLKQIHSQTICTGLISNP----IVPAQIIAFCCKHELGDMEYARMVFDTMP 80
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV 123
F+W ++I+ + ++ +Y +M GV+ +T+ +L R AV
Sbjct: 81 G-PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRD----TAV 135
Query: 124 ICGYTKIGLMDDAQRL-FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
CG L D +L F S NV +A++ Y+ G + A+ +DR ++ + VTW
Sbjct: 136 KCGRE---LHDHIVKLGFSS----NVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTW 188
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
MI+GY + + E+ K+FDE M + V
Sbjct: 189 NVMISGYNRSKQFDESMKLFDE-------------------------------MERMRVL 217
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
S + +V +SAC++L D+ + + ++V + + + NALI M++ CG +D A
Sbjct: 218 PSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGI 277
Query: 303 FSRIKNKDVISYSSMITAFADHG-------------------------------KSQEAL 331
F +K++DVIS+++++T F + G + +E L
Sbjct: 278 FDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVL 337
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+F +M+ I+P++ T + +LTAC+H G +E G
Sbjct: 338 SLFREMQAANIKPDEFTMVSILTACAHLGALELG 371
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 8/256 (3%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G++ A+ VFD + P+ W M Y + G +A+ MY M + V E +
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
T+ V+ L H+ + +V NALIH++S G + +A F R DV+
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVV 186
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+++ MI+ + + E++ +F +M + P+ +T + VL+ACS + G K+
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVG-KRVHRY 245
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+ I+P+ ++D+ G ++ A + + K D +W A++ L
Sbjct: 246 VKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSR-DVISWTAIVTGF-----TNL 299
Query: 433 GEIA-ARHLLELGPEK 447
G++ AR+ + PE+
Sbjct: 300 GQVGLARNYFDKMPER 315
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 268/501 (53%), Gaps = 35/501 (6%)
Query: 23 LLKTLTKPHDQYHYYAQFLIRLLQLPG----------DNLSYARQVFDQIPKCKTQ-FLW 71
L + P +AQ L+R L LP + YAR +FD +P +LW
Sbjct: 14 LAQRALSPAAARQLHAQLLLRGLPLPARAAVTLIASSSSPQYARAIFDSVPAASANVYLW 73
Query: 72 TSLIRNHVLHAH---FRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---------- 118
T+ + ++ HA ++ L+ M R G +GFT SSVL + +++ +
Sbjct: 74 TATVSSYAKHASPALAAEAFPLFMFMLRSGPRPNGFTVSSVLKSLSKLRAAHQVCQVHGF 133
Query: 119 LLEAVICGYTKIG--LMD---------DAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
L++A + +G L+D DA+R+FD M NV+ +AMV+GY G+++AA
Sbjct: 134 LVKAGLASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVGNAMVSGYVKAGDVEAA 193
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
++ +D M E++S++W +++GY + G+ A+ +FDE+ + + + W M + G
Sbjct: 194 RQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVGLWA 253
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
++ ++ MR + R M +SAC QLG + +A + + +GC + +V N+L+
Sbjct: 254 DSVAVFNQMRFMSFRPDAATMAVLMSACAQLGFLSVARQVYGLLRKGCVEMNCHVHNSLV 313
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M +KCG A F+ + KDV+SY+ M++A A HG ++AL +F +M G++P+ V
Sbjct: 314 DMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDAV 373
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+GVL+AC+H GLV+ G FE M + I+ +H CMVDL GR G +E+AH +
Sbjct: 374 TFLGVLSACAHAGLVDSGKYYFETMGTTYAIEKSADHYACMVDLYGRVGLIEEAHYFVKI 433
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
AG WGALL AC+ H N ++GE+AAR L+ + P GN LL+N A +W
Sbjct: 434 MPVKPHAGIWGALLNACRKHCNIDVGEVAARELIRIEPMNPGNYVLLSNTLAWSQQWDAV 493
Query: 468 EIVKMMISETEKKKSPGCSWI 488
V+ ++ K+ G SW+
Sbjct: 494 GDVRQLMRGNGIDKNTGFSWV 514
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 173/486 (35%), Positives = 273/486 (56%), Gaps = 25/486 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPKCKTQF 69
K+ NQ+KQ H++L+ T H A L+++L +LSYA Q+FDQIPK F
Sbjct: 26 KSMNQIKQTHAHLITTGLILHP---ITANKLLKVLIASSFGSLSYAHQLFDQIPKPDV-F 81
Query: 70 LWTSLIRNH-VLHAHFRQSILLYAKMHRL-GVLTSGFTFSSVLNACARVPSLLEA--VIC 125
++ ++I+ H V+ S+ ++ M R+ G L + +TF V AC +LE +
Sbjct: 82 IYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRV 141
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
KIGL E N+ +AM+ YAN G + A+ +D +++ +W M
Sbjct: 142 HAIKIGL------------ESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIM 189
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I GY GE+ AK++FDE+SE D W + YVQ G K A++++ M Q +E
Sbjct: 190 IGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNE 249
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ A++AC L ++ + ++D+ + +L+ M++KCG +D A + F
Sbjct: 250 FTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHD 309
Query: 306 ---IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
+K K V +++MI +A HGKS+EA+D+F +M+ E + PN+VTF+ +L ACSHG LV
Sbjct: 310 EYGLKLK-VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLV 368
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G F+ M +GI+P EH CMVDLLGRSG L++A + + DA WGALLG
Sbjct: 369 EEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLG 428
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H + E G+ + + EL + G LLAN+Y++ G+W +++ V+ I + +KK+
Sbjct: 429 ACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKT 488
Query: 483 PGCSWI 488
PGCS I
Sbjct: 489 PGCSSI 494
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 259/484 (53%), Gaps = 27/484 (5%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYH-----YYAQFLIRLLQLPGDNLS---YARQVFDQIPK 64
LK +H+Y+++T H + A LI P S YA ++F QI +
Sbjct: 30 LTHLKIIHAYMIRT--------HIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQI-Q 80
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI 124
F++ ++IR H + Q+ Y + R G+L TF ++ +C + L +
Sbjct: 81 NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTK----LHCIS 136
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
G G + E++V +++V YA G+ +AA + RM + V+W +
Sbjct: 137 MGSQAHG------HIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTS 190
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
MI G+ KCG+V A+K+FD++ E + W+ M Y QN + A+E++KV++ + VR +
Sbjct: 191 MIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRAN 250
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
E MV IS+C LG +E+ +V + + AL+ M+++CG +D A F
Sbjct: 251 ETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFE 310
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+ +D +S++++I A HG S+ +L F M G+ P +TF VL+ACSHGGLVE
Sbjct: 311 DLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVER 370
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G + FE M R ++P EH CMVDLLGR+G+LE+A ++ +A WGALLGAC
Sbjct: 371 GFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGAC 430
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
++H NAE+GE + L++L P+ +G LL+NIYA+ +W+ ++ M+ KK PG
Sbjct: 431 RIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPG 490
Query: 485 CSWI 488
S I
Sbjct: 491 HSLI 494
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 282/547 (51%), Gaps = 74/547 (13%)
Query: 6 LVPRSKTFNQLKQVHS-YLLKTLTKPHDQYHYYAQFLI-RLLQLPGDNLSYARQVFDQIP 63
L+ + K+ N LKQ+H+ L+ ++ KP+ FL+ +++ L +L+YA VF+Q+
Sbjct: 39 LIKQCKSKNLLKQIHAQMLINSIPKPN--------FLLSKIIDL--KDLAYASLVFNQLT 88
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-- 121
K L + + LY K+ LG+ + FT+ + AC V L+
Sbjct: 89 KPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGK 148
Query: 122 -------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
++I Y + G M A+++FD M +R+++SW++M++GY+ G
Sbjct: 149 IGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMG 208
Query: 163 NMKAAKEFY----------DRMT-----------------------------EKNSVTWV 183
K A + D MT E NS
Sbjct: 209 FTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGS 268
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
A+I YGKCG++ A++VFD + D W A+ Y QNG + AI ++ MR+
Sbjct: 269 ALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHP 328
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
V M+ +SAC+ +G +++ + H E YV++ALI M++KCG LD A R F
Sbjct: 329 DRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVF 388
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR--NEGIEPNQVTFIGVLTACSHGGL 361
+ +K+ +S+++MI+A A HG++QEAL +F +M N ++PN +TFIGVL+AC H GL
Sbjct: 389 ESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGL 448
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + FE M FG+ P EH +CMVDL R+G L +A LI D G+LL
Sbjct: 449 VDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLL 508
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC+ NA++GE + LE+ +GN + + IYA+M +W DS +++++ + K
Sbjct: 509 GACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSK 568
Query: 482 SPGCSWI 488
+PGCSWI
Sbjct: 569 TPGCSWI 575
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 171/539 (31%), Positives = 276/539 (51%), Gaps = 74/539 (13%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLI-RLLQLPGD--NLSYARQVFDQIPKCKTQFLW 71
QLKQ+H+ LL + ++ FLI +L+ ++++ARQVFD +P+ + F W
Sbjct: 36 QLKQIHARLLVLGLQ-------FSGFLITKLIHASSSFGDITFARQVFDDLPRPQI-FPW 87
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL----------- 120
++IR + + HF+ ++L+Y+ M V FTF +L AC+ + L
Sbjct: 88 NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147
Query: 121 ----------EAVICGYTKIGLMDDAQRLFD--SMAERNVISWSAMVAGYANCGNMKAAK 168
+I Y K + A+ +F+ + ER ++SW+A+V+ YA G A
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 169 EFYDRMTEKN-SVTWVAMIA--------------------------------------GY 189
E + M + + WVA+++ Y
Sbjct: 208 EIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
KCG+V AK +FD++ P+ W AM Y +NGYA+ AI+M+ M ++VR +++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
AISAC Q+G +E A + ++V ++S+ALI M +KCG ++ A F R ++
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
DV+ +S+MI + HG+++EA+ ++ M G+ PN VTF+G+L AC+H G+V +G F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
LM I P +H C++DLLGR+G L++A+ +I WGALL ACK H +
Sbjct: 448 NLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
ELGE AA+ L + P TG+ L+N+YA+ W V++ + E K GCSW+
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 182/403 (45%), Gaps = 60/403 (14%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
+ SLI + A +Q ++A++ LG+ SGF + +++A +
Sbjct: 23 FYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHAS--------------SS 65
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV-- 183
G + A+++FD + + W+A++ GY+ + + A Y M +S T+
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 184 ---------------------------------AMIAGYGKCGEVREAKKVFDEISEPDA 210
+IA Y KC + A+ VF+ + P+
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 211 S--CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
+ W A+ Y QNG A+E++ MR+ +V+ VA+V ++A T L D++ +
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
V + + + +L M++KCG + A F ++K+ ++I +++MI+ +A +G ++
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
EA+DMF +M N+ + P+ ++ ++AC+ G +E +E + R + + +
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSAL 364
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
+D+ + G +E A L+ D D W A++ +H A
Sbjct: 365 IDMFAKCGSVEGAR-LVFDRTLDRDVVVWSAMIVGYGLHGRAR 406
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 268/497 (53%), Gaps = 40/497 (8%)
Query: 23 LLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHA 82
+++ +P D + Y L+ L + +L+ AR +FD++P K + +I +H H
Sbjct: 88 FFRSIPRP-DSFSY--NTLLHALGV-SSSLADARALFDEMP-VKDSVSYNVMISSHANHG 142
Query: 83 HFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-----------------VIC 125
+ L L +++ +L A R + EA ++
Sbjct: 143 ----LVSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNALMA 198
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
GY + +++AQ++F+ M +R+V+SW+ MV+G+A G+M A+ +D ++ TW A+
Sbjct: 199 GYVQCSQIEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRDVFTWTAV 258
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR--- 242
++GY + G + EAK+VFD + E +A W AM YVQ + A E++ M NV
Sbjct: 259 VSGYAQNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWN 318
Query: 243 --ISEVAMVGAISACTQLGD-------VEMAAILAKHVDEGCCDRTNYVSNALIH--MHS 291
++ A G + + D V AA+LA + G + T + + M+
Sbjct: 319 TMLTGYAQAGMLDEARAIFDMMPQKDAVSWAAMLAAYSQGGFSEETLQLFKEMGRCAMYF 378
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG ++ A F ++ +D++S+++MI +A HG +EAL++F MR +P+ +T +G
Sbjct: 379 KCGNMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVG 438
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL ACSH GLVE G F M R FG+ EH TCM+DLLGR+G+L++A +L+ D
Sbjct: 439 VLAACSHSGLVEKGISYFYSMHRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFE 498
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D+ WGALLGA ++H N+ELG AA + EL PE G LL+NIYAS GKW+D + ++
Sbjct: 499 PDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMR 558
Query: 472 MMISETEKKKSPGCSWI 488
+M+ E KK PG SWI
Sbjct: 559 LMMHERGVKKVPGFSWI 575
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 148/333 (44%), Gaps = 53/333 (15%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF------------- 170
I + + G + DA+RLF +M+ R+ +++AM+ GYA G + A F
Sbjct: 42 ITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRSIPRPDSFSYN 101
Query: 171 ------------------YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
+D M K+SV++ MI+ + G V A+ FD E DA
Sbjct: 102 TLLHALGVSSSLADARALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVS 161
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W M Y++NG + A +++ R E IS A++ C+Q+ + A+ +
Sbjct: 162 WNGMLAAYIRNGRIQEARDLFDS-RTEWDAISWNALMAGYVQCSQIEE-------AQKMF 213
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
R N ++ H++ G + A R F +DV +++++++ +A +G +EA
Sbjct: 214 NRMPQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRDVFTWTAVVSGYAQNGMLEEAKR 273
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F M E N V++ ++ A ++E+ + F+ M P + L
Sbjct: 274 VFDAM----PEKNAVSWNAMMAAYVQRRMMEEAKELFDAM-------PCRNVASWNTMLT 322
Query: 393 G--RSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G ++G L++A + I D DA +W A+L A
Sbjct: 323 GYAQAGMLDEARA-IFDMMPQKDAVSWAAMLAA 354
>gi|449459744|ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
gi|449529850|ref|XP_004171911.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
Length = 580
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 267/457 (58%), Gaps = 25/457 (5%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
Y L+ GD + +A++VFD++ + K W S++ +V + + L+ +M
Sbjct: 140 YVQTALVDFYSKLGD-MGFAQKVFDEMTE-KNVVSWNSILSGYVKIGNLVDAQKLFDEMP 197
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
+ +++S+L G++ G MD A LF M E++ SW+AM+
Sbjct: 198 ----VKDAISWNSMLT--------------GFSNSGNMDRACCLFQQMGEKSSASWNAMI 239
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI--SEPDASCW 213
GY NCG+MKAA+ +D M +N+VT + +IAGY K GEV A ++FD++ SE + +
Sbjct: 240 GGYVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSAYELFDKMEESEKELLSF 299
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRI--SEVAMVGAISACTQLGDVEMAAILAKHV 271
AM CY QN A+E++ +M Q +V I E+ ISACTQLG++ + ++
Sbjct: 300 NAMIACYSQNSMPNKALELFNLMLQPHVNIQPDEMTFASVISACTQLGNLSYGTWIESYM 359
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
++ + ++++ AL+ +++K G ++ A+ F+ +K +D+++YS+MI + K+ EA+
Sbjct: 360 EKLGIELDDHLATALVDLYAKSGNINRAFELFNGLKKRDLVAYSAMIFGCGINSKAHEAI 419
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
+F +M I PN VT+ G+LTA +H GLV++G F M + G+ PL +H MVDL
Sbjct: 420 RLFKEMLRVNICPNLVTYAGLLTAYNHAGLVDEGYLCFSSM-KDHGLAPLADHYGIMVDL 478
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
LGR+G+LE+A+ LI +AG WGALL ACK+H N ELGEIAAR+ +L + TG
Sbjct: 479 LGRAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTTGYR 538
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+LLANIY+SM +W D++ ++ + K GCSW+
Sbjct: 539 SLLANIYSSMERWDDAKRMRKAMGNKIFAKISGCSWM 575
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
R +++ PDA WA + QNG AI Y M++ + S A+ + AC
Sbjct: 55 RYLQRILHHSRNPDAFTWACAVRFFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRAC 114
Query: 256 TQ-LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
+ + I A+ G C R YV AL+ +SK G + A + F + K+V+S+
Sbjct: 115 GRIMCKFRGWCIHAQVYKLGFC-RCVYVQTALVDFYSKLGDMGFAQKVFDEMTEKNVVSW 173
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+S+++ + G +A +F +M + + +++ +LT S+ G ++ C F+ M
Sbjct: 174 NSILSGYVKIGNLVDAQKLFDEMPVK----DAISWNSMLTGFSNSGNMDRACCLFQQM 227
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 276/484 (57%), Gaps = 34/484 (7%)
Query: 15 QLKQVHSYLLK-TLTKPHDQYHYYAQFLIRLLQLPGDNLS---YARQVFDQIPKCKTQFL 70
+LK++H++++K +L++ + FL+ + DNLS YA +F Q+ F
Sbjct: 22 ELKKIHAHIVKLSLSQ--------SNFLVTKMLDLCDNLSHVDYATMIFQQLENPNV-FS 72
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-FTFSSVLNACA-----RVPSLLEAVI 124
+ ++IR + + +I ++ +M + FTF V+ +CA R+ + A +
Sbjct: 73 YNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHV 132
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
C + + + I+ +A++ Y CG+M A + Y+ MTE+++V+W +
Sbjct: 133 CKFG---------------PKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNS 177
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+G+ + G+++ A++VFDE+ W M Y + G A+ +++ M+ +
Sbjct: 178 LISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPD 237
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
E++++ + AC QLG +E+ + K+ ++ + V NAL+ M++KCG +D AW F+
Sbjct: 238 EISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFN 297
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
++ KDVIS+S+MI A+HGK A+ +F M+ G+ PN VTF+GVL+AC+H GL +
Sbjct: 298 QMIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNE 357
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G + F++M + ++P EH C+VDLLGRSGQ+E+A I+ D+ TW +LL +C
Sbjct: 358 GLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSC 417
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
++H N E+ +A LL+L PE++GN LLANIYA + KW+ V+ +I KK+PG
Sbjct: 418 RIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPG 477
Query: 485 CSWI 488
CS I
Sbjct: 478 CSLI 481
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/486 (33%), Positives = 270/486 (55%), Gaps = 15/486 (3%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGD-NLSYARQVFDQIP 63
+L+ R +L+Q+H +LKT + A L+ P +L+YAR VFD+I
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGLILDE---IPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV 123
+ T F+W ++IR + +++LLY M V + +TF +L AC+ + S E
Sbjct: 80 RPNT-FMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM-SASEET 137
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
+ I M ++ + + NV Y+ G++K+A+ +D++ ++++V+W
Sbjct: 138 QQIHAHIIKMGFGSEIYTTNSLLNV---------YSKSGDIKSARLLFDQVDQRDTVSWN 188
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+MI GY KCGE+ A ++F+ + E + W +M V G K A+ ++ M+ +++
Sbjct: 189 SMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKL 248
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
VA+V + AC LG ++ + ++ + + + LI M++KCG L+ A F
Sbjct: 249 DNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVF 308
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+++ K V +++MI+ +A HG+ +EAL+ F+KM+ G+EPNQ+TF G+LTACSH GLV
Sbjct: 309 RKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVH 368
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ FE M R+ G KP EH CMVDLLGR+G L++A LI + +A WGALL A
Sbjct: 369 EAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C +H N ELG+ + L+++ P G LA+I+A+ G+W + V+ + E K P
Sbjct: 429 CHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLP 488
Query: 484 GCSWIS 489
GCS IS
Sbjct: 489 GCSVIS 494
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 254/454 (55%), Gaps = 22/454 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR +F+++P K W ++I +V + L+ +M ++++++N
Sbjct: 249 MTEARNLFNEMP-TKNLVSWNAMIGAYVRENQIDDAYKLFMEMPE----KDSVSWTAMIN 303
Query: 112 ACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
RV LL+A +I GY + G MD+A +F ++ R+ + W++M
Sbjct: 304 GYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSM 363
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+ GYA+CG A + M K+ V+W MIA Y + G++ +A ++F+E+ E + W
Sbjct: 364 ITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWN 423
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
++ YVQNG A+ + +M+Q+ + + +V + A L + + L +
Sbjct: 424 SLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKT 483
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
+V NA++ M++K G + A F+ IKNKDV+S++S+I +A +G +EA+++F
Sbjct: 484 GFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELF 543
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
M GI P++VTF G+L+AC+HGG V+ G F+ MT + IKP +EH C+++LLGR
Sbjct: 544 EVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGR 603
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
G+LE+A ++ K A WGALL AC++H N EL + +A LL L P+ N LL
Sbjct: 604 VGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLL 663
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+N++A G+W E V++++ E + +K PGCSWI
Sbjct: 664 SNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWI 697
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 170/360 (47%), Gaps = 48/360 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++F+ +P + +LI + FR++ L+ +M V++
Sbjct: 124 LEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVS---------- 173
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+++ GYTK G M + F++M ERNV+SW+ MV GY G++ +A F+
Sbjct: 174 --------WNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFF 225
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
++ N V+WV M++G+ G + EA+ +F+E+ + W AM YV+ A +
Sbjct: 226 KKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYK 285
Query: 232 MYKVMRQENVRISEVAMV-GAISACTQLGDVEM------------AAILAKHVDEGCCDR 278
++ M +++ +S AM+ G + L E+ A++ ++ G D
Sbjct: 286 LFMEMPEKD-SVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDE 344
Query: 279 TNYVS-----------NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
N + N++I ++ CG D A R F + KD++S+++MI A+A G+
Sbjct: 345 ANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQM 404
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+AL+MF NE E N V++ ++T GL + F LM + G KP + C
Sbjct: 405 DKALEMF----NEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQ-GEKPDQTTIVC 459
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 148/293 (50%), Gaps = 20/293 (6%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I Y K G + +A+ LFD M +RN++SW++M+AGY + ++ A +DRM +++ +
Sbjct: 51 SMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYS 110
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEP-DASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W MI Y + GE+ +A+++F+ + + D C A+ Y + + A +++ M +N
Sbjct: 111 WTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKN 170
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V V+ +S T+ G ++ L E +R N ++ + G LD AW
Sbjct: 171 V----VSWNSILSGYTKNGKMQ----LGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAW 222
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +I +V+S+ +M++ FA +G+ EA ++F NE N V++ ++ A
Sbjct: 223 MFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLF----NEMPTKNLVSWNAMIGAYVREN 278
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--IMDYKDF 411
++D K F M + T M++ R G+L +A + +M YK+
Sbjct: 279 QIDDAYKLFMEMPEKDSVS-----WTAMINGYVRVGKLLQAREILNLMPYKNI 326
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 148/332 (44%), Gaps = 52/332 (15%)
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
V + + ++ G ++ A + +MTE+N VT+ +MI+ Y K G + A+++FD + +
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
+ W +M Y+ N + A ++ M + ++ + I+ T++G++E A L
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDI----YSWTLMITCYTRIGELEKAREL 130
Query: 268 AKHVDEGCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ D+ + V NALI ++K A + F + K+V+S++S+++ + +GK
Sbjct: 131 FNLLP----DKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGK 186
Query: 327 SQEALDMFLKMRNEGI---------------------------EPNQVTFIGVLTACSHG 359
Q L F M + PN V+++ +L+ +H
Sbjct: 187 MQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHY 246
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG---RSGQLEKAHSLIMDYKDFCDAGT 416
G + + F M T++L ++G R Q++ A+ L M+ + D+ +
Sbjct: 247 GRMTEARNLFNEMP--------TKNLVSWNAMIGAYVRENQIDDAYKLFMEMPE-KDSVS 297
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKT 448
W A++ V V L AR +L L P K
Sbjct: 298 WTAMING-YVRVGKLL---QAREILNLMPYKN 325
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 272/550 (49%), Gaps = 75/550 (13%)
Query: 4 KYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
YL FNQLK +H+ LL+ H Y LI L + +Y++ VF Q+
Sbjct: 20 NYLSNGLNFFNQLKHIHARLLRL----HLDQDNYLLNLILCCALDFGSTNYSKLVFSQV- 74
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR-------- 115
K FLW ++IR V F +I LY M G L + FT VL ACAR
Sbjct: 75 KEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGL 134
Query: 116 -VPSLL------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
+ SLL +++ Y K DDA ++FD + ++NV+SW+A++ GY + G
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 163 NMKAAKEFYDRMTE---------------------------------------KNSVTWV 183
+ + A + ++ E +N
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+++ Y KCG + A +F + E D W+ M Y NG + A++++ M+ EN++
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKP 314
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN-----ALIHMHSKCGYLDL 298
MVG +SAC LG +++ I A + DR ++SN ALI M+SKCG +
Sbjct: 315 DCYTMVGVLSACATLGALDLG-IWASSL----MDRNEFLSNPVLGTALIDMYSKCGSVTQ 369
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
AW F+ +K KD + +++M+ + +G ++ +F + GI P++ TFIG+L C+H
Sbjct: 370 AWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTH 429
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GG V +G + F M RVF + P EH CMVDLLGR+G L +AH LI + +A WG
Sbjct: 430 GGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWG 489
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALLG CK+H + L E + L+EL P +GN L+NIY+ +W+++E ++ + E +
Sbjct: 490 ALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQ 549
Query: 479 KKKSPGCSWI 488
+K CSWI
Sbjct: 550 IQKIRACSWI 559
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 272/550 (49%), Gaps = 75/550 (13%)
Query: 4 KYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
YL FNQLK +H+ LL+ H Y LI L + +Y++ VF Q+
Sbjct: 20 NYLSNGLNFFNQLKHIHARLLRL----HLDQDNYLLNLILCCALDFGSTNYSKLVFSQV- 74
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR-------- 115
K FLW ++IR V F +I LY M G L + FT VL ACAR
Sbjct: 75 KEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGL 134
Query: 116 -VPSLL------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
+ SLL +++ Y K DDA ++FD + ++NV+SW+A++ GY + G
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 163 NMKAAKEFYDRMTE---------------------------------------KNSVTWV 183
+ + A + ++ E +N
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVAT 254
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+++ Y KCG + A +F + E D W+ M Y NG + A++++ M+ EN++
Sbjct: 255 SLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKP 314
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN-----ALIHMHSKCGYLDL 298
MVG +SAC LG +++ I A + DR ++SN ALI M+SKCG +
Sbjct: 315 DCYTMVGVLSACATLGALDLG-IWASSL----MDRNEFLSNPVLGTALIDMYSKCGSVTQ 369
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
AW F+ +K KD + +++M+ + +G ++ +F + GI P++ TFIG+L C+H
Sbjct: 370 AWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTH 429
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GG V +G + F M RVF + P EH CMVDLLGR+G L +AH LI + +A WG
Sbjct: 430 GGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWG 489
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALLG CK+H + L E + L+EL P +GN L+NIY+ +W+++E ++ + E +
Sbjct: 490 ALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQ 549
Query: 479 KKKSPGCSWI 488
+K CSWI
Sbjct: 550 IQKIRACSWI 559
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/499 (30%), Positives = 263/499 (52%), Gaps = 32/499 (6%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
+ FNQ++ + +L T+ + H +Q + D F + K T
Sbjct: 72 TNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGN 131
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL---------- 119
+W +I + ++A++ + G ++ F +S++++ ++ S
Sbjct: 132 VWLPVIES------------VHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFV 179
Query: 120 ----------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
++I G K GL ++A+++FD M E++ ISW+ M+ GY G M A +
Sbjct: 180 SMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFK 239
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D M E+N V+W M+ GY K G++ A+ +FD++ + W + + + G A+ A
Sbjct: 240 LFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREA 299
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
I ++ M + +++ ++ ++AC + G + + + + T +SNAL+ M
Sbjct: 300 ISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDM 359
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG L++A+ F+ IKNKDV+S+++M+ A HG +AL++F +M+ EG PN+VT
Sbjct: 360 YAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTM 419
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
IGVL AC+H GL++DG + F M R + + P EH CMVDLLGR G+LE+A LI +
Sbjct: 420 IGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMP 479
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+A WG LLGAC++H EL HL+EL P +GN ++L+NIYA+ G W
Sbjct: 480 MAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVAN 539
Query: 470 VKMMISETEKKKSPGCSWI 488
++ + KK G S I
Sbjct: 540 TRLRMRSIGTKKPSGASSI 558
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 263/505 (52%), Gaps = 39/505 (7%)
Query: 23 LLKTLTKPHDQYHYYAQFLIRLLQLPG----------DNLSYARQVFDQ-IPKCKTQ-FL 70
L + T P AQ L+R L LP + +AR VFD +P +L
Sbjct: 19 LARRATSPAAARQLQAQLLVRGLPLPARAAVALIASSHSPRHARAVFDSAVPAASENVYL 78
Query: 71 WTSLIRNHVLHAHFRQS-----ILLYAKMHRLGVL-TSGFTFSSVLNACARVPSLLE--- 121
WT+ I + HA S + L+ M R GV + FT SSV+ C+ + ++ E
Sbjct: 79 WTATIAAYARHASSSLSAAEGALALFRLMLRRGVPRPNAFTASSVVRCCSALRAVREGIQ 138
Query: 122 ------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
A++ Y +G + DA+R+FD M NV+ + MVA Y G+
Sbjct: 139 VHGFLFSAGLGRASHVGAALVDMYGSLGRVADARRVFDEMPSTNVVLGNTMVACYVRAGD 198
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
++A ++ +DRM E++ ++W ++ GY + GE A+ +F+E+ + + + W + Q
Sbjct: 199 VEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGVARDLFEEMPDRNVNSWNMVIAACSQE 258
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G A+E++ MR + M +SAC QLG + +A+ + + +GC + +V
Sbjct: 259 GLWADAVEVFNRMRLARFQPDPATMAVLMSACAQLGSLSIASQVHGILRKGCVEMNFHVL 318
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
N+LI M++KCG + A F + KD +SY+ MI A A HG ++AL +F +M EG++
Sbjct: 319 NSLIDMYAKCGSVSQAHLLFVETRLKDTVSYNVMICALAQHGHGRDALQIFDEMSEEGLQ 378
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
P+ VTF+GVL+AC+H GLV DG FE M + I+ +H CMVDL GR+G +E+A+
Sbjct: 379 PDAVTFLGVLSACAHAGLVHDGKFYFESMRTNYAIEQSPDHYACMVDLYGRAGLIEEAYQ 438
Query: 404 LIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGK 463
L AG WGAL+ AC+ H N E+G++AAR L+ + P G LLAN A +
Sbjct: 439 LARAMPVKPHAGVWGALINACRKHCNVEVGKVAARELIAIEPGNPGTYVLLANTLARGQQ 498
Query: 464 WKDSEIVKMMISETEKKKSPGCSWI 488
W E V + +K+ GCSW+
Sbjct: 499 WDFVETVWQSMRGKGIEKTAGCSWL 523
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 276/539 (51%), Gaps = 74/539 (13%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLI-RLLQLPGD--NLSYARQVFDQIPKCKTQFLW 71
QLKQ+H+ LL + ++ FLI +L+ ++++ARQVFD +P+ + F W
Sbjct: 36 QLKQIHARLLVLGLQ-------FSGFLITKLIHASSSFGDITFARQVFDDLPRPQI-FPW 87
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL----------- 120
++IR + + HF+ ++L+Y+ M V FTF +L AC+ + L
Sbjct: 88 NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147
Query: 121 ----------EAVICGYTKIGLMDDAQRLFD--SMAERNVISWSAMVAGYANCGNMKAAK 168
+I Y K + A+ +F+ + ER ++SW+A+V+ YA G A
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 169 EFYDRMTEKN-SVTWVAMIA--------------------------------------GY 189
E + +M + + WVA+++ Y
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
KCG+V AK +FD++ P+ W AM Y +NGYA+ AI+M+ M ++VR +++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
AISAC Q+G +E A + ++V ++S+ALI M +KCG ++ A F R ++
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
DV+ +S+MI + HG+++EA+ ++ M G+ PN VTF+G+L AC+H G+V +G F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M I P +H C++DLLGR+G L++A+ +I WGALL ACK H +
Sbjct: 448 NRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
ELGE AA+ L + P TG+ L+N+YA+ W V++ + E K GCSW+
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 182/403 (45%), Gaps = 60/403 (14%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
+ SLI + A +Q ++A++ LG+ SGF + +++A +
Sbjct: 23 FYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHAS--------------SS 65
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV-- 183
G + A+++FD + + W+A++ GY+ + + A Y M +S T+
Sbjct: 66 FGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHL 125
Query: 184 ---------------------------------AMIAGYGKCGEVREAKKVFDEISEPDA 210
+IA Y KC + A+ VF+ + P+
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 211 S--CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
+ W A+ Y QNG A+E++ MR+ +V+ VA+V ++A T L D++ +
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
V + + + +L M++KCG + A F ++K+ ++I +++MI+ +A +G ++
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
EA+DMF +M N+ + P+ ++ ++AC+ G +E +E + R + + +
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS-DYRDDVFISSAL 364
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
+D+ + G +E A L+ D D W A++ +H A
Sbjct: 365 IDMFAKCGSVEGAR-LVFDRTLDRDVVVWSAMIVGYGLHGRAR 406
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 264/483 (54%), Gaps = 16/483 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ RS+ NQ+ +H+ L++ H Q + L+R + YA ++F Q
Sbjct: 55 LLQRSRHINQVLPIHAQLIRN---GHSQDPFMVFELLRSCS-KCHAIDYASRIF-QYTHN 109
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
+L+T+LI V ++ ++I LY++M +L + +S+L AC +L E
Sbjct: 110 PNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREV 169
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
+ L + RL ++ Y CG + A+ ++ M E + V M
Sbjct: 170 HSRALKLGFSSNRLVRL----------RIMELYGKCGELGDARRVFEEMPE-DVVASTVM 218
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I+ Y G V EA VF + D CW AM +V+N A+E ++ M+ ENVR +E
Sbjct: 219 ISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNE 278
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+V +SAC+QLG +E+ + ++ + + +V NALI+M+S+CG +D A F
Sbjct: 279 FTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDE 338
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+K++DVI+Y++MI+ + +GKS++A+++F M + P VTF+GVL ACSHGGLV+ G
Sbjct: 339 MKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFG 398
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F M R + ++P EH CMVDLLGR G+LE+A+ LI K D G LL ACK
Sbjct: 399 FEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACK 458
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H N ELGE A+ L + G +G LL+++YAS GKWK++ V+ + E +K PGC
Sbjct: 459 MHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGC 518
Query: 486 SWI 488
S I
Sbjct: 519 SSI 521
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 273/513 (53%), Gaps = 48/513 (9%)
Query: 11 KTFNQLKQVHSYL----LKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
K F L Q+H+++ L + + Y A L +PG L YA ++F++IPK
Sbjct: 23 KNFRTLMQIHAFMVVNGLMSNLSVVGELIYSAS-----LSVPG-ALKYAHKLFEEIPKPD 76
Query: 67 TQFLWTSLIRNHVLHAHFR-----QSILLYAKMHRLGVLTSGFTFSSVLNACARVP---- 117
I NHVL + +++ LY +M + GV +TF+ VL AC+++
Sbjct: 77 VS------ICNHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSN 130
Query: 118 -----------------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
+ A+I + G + A LFD A+ + ++WS+M +GYA
Sbjct: 131 GFAIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAK 190
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
G + A +D M +K+ V W MI G KC E+ A+++FD +E D W AM Y
Sbjct: 191 RGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGY 250
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE-GCCDRT 279
V GY K A+ ++K MR V ++ +SAC LGD+E L ++ E +
Sbjct: 251 VNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 280 NYVS----NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
YV NALI M++KCG +D A F +K++D+ +++++I A H ++ +++MF
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALH-HAEGSVEMFE 369
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRS 395
+M+ + PN+VTFIGV+ ACSH G V++G K F LM ++ I+P +H CMVD+LGR+
Sbjct: 370 EMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRA 429
Query: 396 GQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLA 455
G LE+A + K +A W LLGACK++ N ELG+ A LL + +++G+ LL+
Sbjct: 430 GLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLS 489
Query: 456 NIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
NIYAS G+W + V+ M +T KK G S I
Sbjct: 490 NIYASTGQWDGVQKVRKMFDDTRVKKPTGISLI 522
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 239/423 (56%), Gaps = 13/423 (3%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
K+ F S I N ++H LYA LG F+ S + + A+I
Sbjct: 28 KSGFECDSYIVNSLIH--------LYANGKDLGAAKQLFSLCSDRDVVS-----WNAMID 74
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
GY K G M + +FD M R+VISW+ ++ GYA G + AK +D M E+N V+W +M
Sbjct: 75 GYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSM 134
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
++G+ KCG V EA +F E+ D W +M CY Q G A+ ++ MR V+ +E
Sbjct: 135 LSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTE 194
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+V +SAC LG ++ L ++++ + + V AL+ M++KCG + LA + F+
Sbjct: 195 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 254
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+++KDV++++++I A HG +EA +F +M+ +EPN +TF+ +L+ACSH G+V++G
Sbjct: 255 MESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEG 314
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
K + M+ +GI+P EH C++DLL R+G LE+A LI + GALLG C+
Sbjct: 315 QKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCR 374
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H N ELGE+ + L+ L P +G LL+NIYA+ KW D+ V+ ++ K PG
Sbjct: 375 IHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 434
Query: 486 SWI 488
S I
Sbjct: 435 SVI 437
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 133/289 (46%), Gaps = 41/289 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ A +F ++P C+ W S++ + +++ L+ +M +GV + T S+L
Sbjct: 143 NVEEAFGLFSEMP-CRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 201
Query: 111 NACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA + +L + A++ Y K G + A ++F++M ++V+
Sbjct: 202 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 261
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+W+ ++AG A G++K A++ + M E N +T+VAM++ G V E +K+ D +
Sbjct: 262 AWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 321
Query: 206 S-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
S EP + + + G + A+E+ M E + A+ + C G+
Sbjct: 322 SSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEP---NPSALGALLGGCRIHGN 378
Query: 261 VEMAAILAKH-VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
E+ ++ K ++ C Y+ + I+ +K W + +++N
Sbjct: 379 FELGEMVGKRLINLQPCHSGRYILLSNIYAAAK------KWDDARKVRN 421
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
I AC + ++ HV + + +Y+ N+LIH+++ L A + FS ++DV
Sbjct: 7 IKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDV 66
Query: 312 ISYSSMITAFADHGKSQEALDMFLKM 337
+S+++MI + G+ +F +M
Sbjct: 67 VSWNAMIDGYVKRGEMGHTRMVFDRM 92
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 267/493 (54%), Gaps = 32/493 (6%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
+F L + H+ + + Q +Y L+ L G +L A++VF+ I T +W
Sbjct: 39 SFRNLAKTHA---QIVVSGFSQKNYILNHLLSLYISFG-SLGSAQKVFEDITAPSTT-VW 93
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-VICGYTKI 130
+I+ H ++SI L+ +M GV +GFT+S +L+AC R E I G
Sbjct: 94 NQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHG---- 149
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGN-----MKAAKEFYDRMTEKNSVTWVAM 185
R+ + N+ + ++ YAN G+ +K A +D M + N V W ++
Sbjct: 150 -------RVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSL 202
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
+AGY + G+ A+KVFDE+ E + W M + QNG K A+ ++ MR+ V + +
Sbjct: 203 LAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQ 262
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV----SNALIHMHSKCGYLDLAWR 301
VA+V A+SAC +LGD+ + + +V+ R V +NALIHM++ CG +DLA++
Sbjct: 263 VALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYK 322
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG---IEPNQVTFIGVLTACSH 358
F I ++ +S+SS+IT FA G EA+ +F M G + P+++TFIG LTACSH
Sbjct: 323 LFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSH 382
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL+ DG + F+ M + FG+ P EH CMVDLL R+G L +A SLI + WG
Sbjct: 383 AGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWG 442
Query: 419 ALLGACKVHVNAELGEIAARHL-LELGP--EKTGNSALLANIYASMGKWKDSEIVKMMIS 475
ALL C++H N E+ A+HL E+ P + G LLAN+YA+ G+W+D+ V+ +
Sbjct: 443 ALLSGCRLHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMH 502
Query: 476 ETEKKKSPGCSWI 488
+ KK G SWI
Sbjct: 503 DIGVKKPSGRSWI 515
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 262/460 (56%), Gaps = 11/460 (2%)
Query: 35 HYYAQFLIRLLQL----PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILL 90
H +A L ++ + P L YA ++F QI + T F + +LIR + + QS+ L
Sbjct: 270 HNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNT-FFYNTLIRGYSKSSSPSQSVQL 328
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
+ +M R V GFTF+ +L +R+ L ++ G + F ++
Sbjct: 329 FNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCF------HLFV 382
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
+A++ YA G AA + ++ M + V+W ++ + + GE+ A++VFDE+ E D
Sbjct: 383 MNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDV 442
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W M Y Q ++ A+E+++ MR VR EVAMV ISACT LGD+E + ++
Sbjct: 443 VSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRY 502
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+DE + NALI M++KCG +DLAW+ F+ ++ K +I+++SMI+A A+HG +++A
Sbjct: 503 IDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDA 562
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
+F M GI P+ VTF+ +LTA +H G V+DG FE M R +G++ EH CMVD
Sbjct: 563 FRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVD 622
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGN 450
+LGR+G+LE+A+ LI C+ WGALL AC+++ + E+GE + L+EL P++ G
Sbjct: 623 MLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGY 682
Query: 451 SALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
LL +IY + G+ ++ ++ + KK+ GCSW+ +
Sbjct: 683 YILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWVGA 722
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 197/453 (43%), Gaps = 64/453 (14%)
Query: 35 HYYAQFLIRLLQL----PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILL 90
H +A L ++ + P L YA ++F QI + T F + +LIR + + QS+ L
Sbjct: 116 HNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNT-FFYNTLIRGYSKSSSPSQSVQL 174
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICG--YTKIGLMDDAQRLFDSMAERNV 148
+ +M R V GFTF+ +L +R+ L ++ G+ D + S V
Sbjct: 175 FNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAGVDYDKYKTLKSYISNKV 234
Query: 149 ---ISWSAMVAGYAN-CGNMKAAKEFYDRMTEKN------SVTWVAMIAGYGKCGEVREA 198
+ S +A A C M+A K + R N + + A G + A
Sbjct: 235 MHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYA 294
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
++F +I +P+ + + Y ++ +++++ MR+ V + +++
Sbjct: 295 DRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRM 354
Query: 259 GDVEMAAILAKHVDEGCCDRTN-----YVSNALIHM------------------------ 289
+++ I+A G + +V NALIH+
Sbjct: 355 -RIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVS 413
Query: 290 -------HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
H + G L+LA + F + +DV+S++ M++ +A +S+EAL++F +MR+ G+
Sbjct: 414 WSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGV 473
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV--FGIKPLTEHLTCMVDLLGRSGQLEK 400
P++V + V++AC+ G +E G FE+ + G + ++D+ + G ++
Sbjct: 474 RPDEVAMVIVISACTSLGDLETG---FEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDL 530
Query: 401 AHSLI--MDYKDFCDAGTWGALLGACKVHVNAE 431
A + M+ K TW +++ AC H NAE
Sbjct: 531 AWQVFNNMERKSLI---TWNSMISACANHGNAE 560
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 269/483 (55%), Gaps = 17/483 (3%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL----PGDNLSYARQVFDQIPKCKT 67
T LK +H+ + H++A L ++ + P L YA ++F QI + T
Sbjct: 194 TMQALKLIHALAFRA------NLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNT 247
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGY 127
F + +LIR + + QS+ L+ +M R V GFTF+ +L +R+ L ++
Sbjct: 248 -FFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASD 306
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
G + F ++ +A++ YA G AA + ++ M + V+W ++
Sbjct: 307 EIHGAVLKLGFCF------HLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVV 360
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
+ + GE+ A++VF E+ E D W M Y Q ++ A+E+++ MR VR EVA
Sbjct: 361 AHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVA 420
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
MV ISACT LGD+E + +++DE + NALI M++KCG +DLAW+ F+ ++
Sbjct: 421 MVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNME 480
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
K +I+++SMI+A A+HG +++A +F M GI P+ VTF+ +LTA +H G V+DG
Sbjct: 481 RKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYG 540
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
FE M R +G++ EH CMVD+LGR+G+LE+A+ LI C+ WGALL AC+++
Sbjct: 541 LFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIY 600
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+ E+GE + L+EL P++ G LL +IY + G+ ++ ++ + KK+ GCSW
Sbjct: 601 GDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSW 660
Query: 488 ISS 490
+ +
Sbjct: 661 VGA 663
>gi|147828480|emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
Length = 841
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 223/368 (60%), Gaps = 10/368 (2%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I GY + G M+ A LF M ERN SW+AM++GY G++ +A+ F+D M + N+V+
Sbjct: 206 SMISGYARAGDMEKALSLFQQMPERNFASWNAMISGYVEFGDIDSARSFFDAMPQXNNVS 265
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-- 239
W+ MI+GY KCG+V A ++FD++ D + AM CY QN K A++++ M
Sbjct: 266 WMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDV 325
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
NV+ E+ + ISAC+QLGD+ + ++ + +++ AL+ +++KCG +D A
Sbjct: 326 NVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKA 385
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F ++ KD+++Y++MI +GK+ +A+ +F +M + I PN +TFIG+LTA +H
Sbjct: 386 YELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHA 445
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLVE+G + F M + + + P +H MVDLLGR+G+L++A LI AG WGA
Sbjct: 446 GLVEEGYRCFTSMKK-YNLVPSVDHYGIMVDLLGRAGRLQEALELIKSMPMQPHAGVWGA 504
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL AC++H N E GEIAA+H EL P+ TG +LL+NIYAS +W D + K
Sbjct: 505 LLLACRLHNNVEFGEIAAQHCFELEPDTTGYXSLLSNIYASGERWDD-------VKRLRK 557
Query: 480 KKSPGCSW 487
P W
Sbjct: 558 SPKPEIWW 565
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 195/404 (48%), Gaps = 32/404 (7%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLS-----YARQVFDQIPK 64
S + Q KQVH+ +L H H L R + J N S Y V K
Sbjct: 10 SLSVKQAKQVHALILI-----HGLSHL-EPILARQILJSASNYSATVAQYVHSVLHH-SK 62
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI 124
F W IR H F+++ LY +M R G+ + F SS L ACAR+ +
Sbjct: 63 SPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGG-- 120
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
+ + Q+ S + +A+V Y G+M+ A++ +D M E+N V+W +
Sbjct: 121 -----LSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNS 175
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
M+AGY K G++ A++VFDEI + D W +M Y + G + A+ +++ M + N S
Sbjct: 176 MLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNF-AS 234
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
AM IS + GD++ A+ + N +I +SKCG +D A F
Sbjct: 235 WNAM---ISGYVEFGDIDS----ARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFD 287
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE--GIEPNQVTFIGVLTACSHGGLV 362
++ KD++ +++MI +A + + +EAL +F M N ++P+++T V++ACS G +
Sbjct: 288 QVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDL 347
Query: 363 EDGCKQFELMTRVFGIKPLTEHL-TCMVDLLGRSGQLEKAHSLI 405
G E R GI+ + HL T ++DL + G ++KA+ L
Sbjct: 348 RFG-PWIESYMRRLGIE-MDGHLATALLDLYAKCGSIDKAYELF 389
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM--HRLGVLTSGFTFSS 108
++ A ++FDQ+ K L+ ++I + ++ ++++ L+ M + V T +S
Sbjct: 278 DVDSACELFDQV-GGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLAS 336
Query: 109 VLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERN 147
V++AC+++ L A++ Y K G +D A LF + +++
Sbjct: 337 VISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKD 396
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFD 203
+++++AM+ G G A + +D M + N +T++ ++ Y G V E + F
Sbjct: 397 LVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEEGYRCFT 456
Query: 204 EISE----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQL 258
+ + P + M + G + A+E+ K M + + GA + AC
Sbjct: 457 SMKKYNLVPSVDHYGIMVDLLGRAGRLQEALELIKSMPMQ----PHAGVWGALLLACRLH 512
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVS 283
+VE I A+H E D T Y S
Sbjct: 513 NNVEFGEIAAQHCFELEPDTTGYXS 537
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 273/487 (56%), Gaps = 36/487 (7%)
Query: 15 QLKQVHSYLLK--------TLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
+LK++H++++K +TK D +++A+ YA +F ++
Sbjct: 29 ELKKIHAHIVKFSLSQSSFLVTKMVDVCNHHAE------------TEYANLLFKRVAD-P 75
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKM--HRLG---VLTSGFTFSSVLNACARVPSLLE 121
FL+ ++IR + + + +I +Y +M H G + FTF V+ +CA
Sbjct: 76 NAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCA------- 128
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++C +G +F + N + +++V Y C ++ A + ++ MTE+++V+
Sbjct: 129 GLMC--YDLGKQVHGH-VFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVS 185
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +I+G+ + G++R A+ +F+E+ + W A+ Y + G A+E ++ M+ +
Sbjct: 186 WNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGI 245
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
E+++V + AC QLG +E+ + + D+ R V NALI M++KCG +D R
Sbjct: 246 EPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRR 305
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F ++ +DVIS+S+MI A+HG++ EA+++F +M+ IEPN +TF+G+L+AC+H GL
Sbjct: 306 LFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGL 365
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ +G + FE M R + I+P EH C+V+LLG SG+L++A LI D+ WG+LL
Sbjct: 366 LNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLL 425
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
+C+ H N E+ IA HLLEL P TGN LL+N+YA +GKW ++ ++ KK
Sbjct: 426 SSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKK 485
Query: 482 SPGCSWI 488
+PGCS I
Sbjct: 486 TPGCSSI 492
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 275/534 (51%), Gaps = 69/534 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+++H +LK D + A L+ + G+ + A VF I W ++I
Sbjct: 203 RKIHGLMLKM---GLDLDQFSANALVDMYSKAGE-IEGAVAVFQDIAHPDV-VSWNAIIA 257
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV-------------------P 117
VLH +++L +M G + FT SS L ACA +
Sbjct: 258 GCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHS 317
Query: 118 SLLEAV--ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
L AV + Y+K +MDDA+R +DSM ++++I+W+A+++GY+ CG+ A + +M
Sbjct: 318 DLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMF 377
Query: 176 EKN-------------------------SVTWVAMIAG--------------YGKCGEVR 196
++ + +++ +G YGKC +
Sbjct: 378 SEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHID 437
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
EA K+F+E + D + +M Y Q G + A+++Y M+ +++ ++AC
Sbjct: 438 EASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACA 497
Query: 257 QLGDVEMAAILAKHVDEG--CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
L E L H + CD + SN+L++M++KCG ++ A R FS I N+ ++S+
Sbjct: 498 NLSAYEQGKQLHVHAIKFGFMCDI--FASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSW 555
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
S+MI +A HG +EAL +F +M +G+ PN +T + VL AC+H GLV +G + FE M
Sbjct: 556 SAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEV 615
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+FGIKP EH CM+DLLGRSG+L +A L+ D WGALLGA ++H N ELG+
Sbjct: 616 MFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQ 675
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA+ L +L PEK+G LLANIYAS G W++ V+ + +++ KK PG SWI
Sbjct: 676 KAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWI 729
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 184/414 (44%), Gaps = 62/414 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
YAR++ D+ + W+SL+ +V + +++L++ +M LGV + FTF SVL
Sbjct: 32 FGYARKLVDESSELDV-VSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLK 90
Query: 112 ACARVPSLLE-------AVICG--------------YTKIGLMDDAQRLFDSMAERNVIS 150
AC+ L AV+ G Y K GL+DD++RLF + ERNV+S
Sbjct: 91 ACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVS 150
Query: 151 WSAMVAGYAN---CGNMKAAKEFYDR---MTEKNSVTWV--------------------- 183
W+A+ + Y CG + R M + S++ +
Sbjct: 151 WNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLML 210
Query: 184 ------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
A++ Y K GE+ A VF +I+ PD W A+ V + A+
Sbjct: 211 KMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALM 270
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+ M+ R + + A+ AC +G E+ L + + + + L+ M+S
Sbjct: 271 LLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYS 330
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KC +D A R + + KD+I+++++I+ ++ G +A+ +F KM +E I+ NQ T
Sbjct: 331 KCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLST 390
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
VL + + ++ CKQ ++ GI + ++D G+ +++A +
Sbjct: 391 VLKSVASLQAIK-VCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIF 443
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 124/245 (50%), Gaps = 6/245 (2%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
++ Y KC A+K+ DE SE D W+++ YVQNG+ + A+ ++ M V+ +
Sbjct: 22 LVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCN 81
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
E + AC+ D+ M + + +V+N L+ M++KCG LD + R F
Sbjct: 82 EFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFG 141
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
I ++V+S++++ + + EA+ +F +M GI PN+ + +L AC+ GL E
Sbjct: 142 GIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA--GLQEG 199
Query: 365 --GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
G K LM ++ G+ +VD+ ++G++E A ++ D D +W A++
Sbjct: 200 DLGRKIHGLMLKM-GLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAIIA 257
Query: 423 ACKVH 427
C +H
Sbjct: 258 GCVLH 262
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 136/291 (46%), Gaps = 39/291 (13%)
Query: 114 ARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
+R PSL ++ Y+K A++L D +E +V+SWS++++GY G ++ A ++
Sbjct: 13 SRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNE 72
Query: 174 M----TEKNSVTW---------------------VAMIAG--------------YGKCGE 194
M + N T+ +A++ G Y KCG
Sbjct: 73 MCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGL 132
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+ +++++F I E + W A+ CYVQ+ A+ ++K M + + +E ++ ++A
Sbjct: 133 LDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNA 192
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C L + ++ + + + D + +NAL+ M+SK G ++ A F I + DV+S+
Sbjct: 193 CAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSW 252
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+++I H + AL + +M+ G PN T L AC+ G E G
Sbjct: 253 NAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELG 303
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/460 (36%), Positives = 260/460 (56%), Gaps = 24/460 (5%)
Query: 43 RLLQLPGDN----LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG 98
RLL+ D+ L Y+ Q+FD+I F+W +++R ++ +++LLY M +
Sbjct: 66 RLLKFSTDSPFIGLDYSLQIFDRIEN-SNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNN 124
Query: 99 VLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRL-FDSMAERNVISWSAMVAG 157
V +T+ V+ ACA LLE + + D ++ FDS +V + ++
Sbjct: 125 VGPDNYTYPLVVQACA--VRLLE-----FGGKEIHDHVLKVGFDS----DVYVQNTLINM 173
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY---GKCGEVREAKKVFDEISEPDASCWA 214
YA CGNM+ A++ +D +SV+W +++AGY G G+V EA K+F+E+ E D W+
Sbjct: 174 YAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWS 233
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
A+ Y QNG + A+ M+ M +R+ EV +V +SAC L V+ ++ V
Sbjct: 234 ALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRM 293
Query: 275 CCDRTNYVSNALIHMHS----KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ + NALIHM+S KCG ++ A F+ ++ K V S++++I A +G + +
Sbjct: 294 GIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERS 353
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
LDMF +M+N G+ PN++TF+GVL AC H GLV++G F M GI+P +H CMVD
Sbjct: 354 LDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVD 413
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGN 450
LLGR+G L +A LI D TWGALLGACK H + E+GE R L+EL P+ G
Sbjct: 414 LLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGF 473
Query: 451 SALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
LL+NI+AS G W+D V+ M+ + K+PGCS I +
Sbjct: 474 HVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEA 513
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/433 (34%), Positives = 245/433 (56%), Gaps = 13/433 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD + W ++ + F++S +L+ +M + GV + T +L+AC+
Sbjct: 161 ARKVFDMGDAWEV-VTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACS 219
Query: 115 RVPSLLEAV-ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
++ L I Y G++ ERN+I + ++ +A CG M A+ +D
Sbjct: 220 KLKDLEGGKHIYKYINGGIV-----------ERNLILENVLIDMFAACGEMDEAQSVFDN 268
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M ++ ++W +++ G+ G++ A+K FD+I E D W AM Y++ A+ ++
Sbjct: 269 MKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALF 328
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M+ NV+ E MV ++AC LG +E+ + ++D+ +V NALI M+ KC
Sbjct: 329 REMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKC 388
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A + F + +KD ++++MI A +G +EAL MF M I P+++T+IGVL
Sbjct: 389 GNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVL 448
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC+H G+VE G F MT GIKP H CMVDLLGR+G+LE+AH +I++ +
Sbjct: 449 CACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPN 508
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
+ WG+LLGAC+VH N +L E+AA+ +LEL PE LL NIYA+ +W++ V+ +
Sbjct: 509 SIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKL 568
Query: 474 ISETEKKKSPGCS 486
+ E KK+PGCS
Sbjct: 569 MMERGIKKTPGCS 581
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 201/459 (43%), Gaps = 81/459 (17%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + K+ QLKQ+HS+ +K + + + + YARQVFD IP+
Sbjct: 13 LLEKCKSMYQLKQIHSHTIKMGLSSDPLFQ--KRVIAFCCAHESGKMIYARQVFDAIPQ- 69
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
T F+W ++I+ + H + + +Y M + FTF +L R +L
Sbjct: 70 PTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMAL------ 123
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
Y K+ L + FDS N+ A + ++ C + A++ +D VTW M
Sbjct: 124 QYGKVLLNHAVKHGFDS----NLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIM 179
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
++GY + + +++K +F E M + V +
Sbjct: 180 LSGYNRVKQFKKSKMLFIE-------------------------------MEKRGVSPNS 208
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
V +V +SAC++L D+E + K+++ G +R + N LI M + CG +D A F
Sbjct: 209 VTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDN 268
Query: 306 IKNKDVISYSSMITAFADHGKSQ-------------------------------EALDMF 334
+KN+DVIS++S++T FA+ G+ EAL +F
Sbjct: 269 MKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALF 328
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
+M+ ++P++ T + +LTAC+H G +E G + + IK T ++D+ +
Sbjct: 329 REMQMSNVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNSIKNDTFVGNALIDMYFK 387
Query: 395 SGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAE 431
G + KA + M +K D TW A++ ++ + E
Sbjct: 388 CGNVGKAKKVFKEMHHK---DKFTWTAMIVGLAINGHGE 423
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 122/256 (47%), Gaps = 8/256 (3%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G++ A++VFD I +P W M Y + + + + MY +M N++ +
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLL 114
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
T+ ++ +L H + D +V A IHM S C +DLA + F +V+
Sbjct: 115 KGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVV 174
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+++ M++ + + +++ +F++M G+ PN VT + +L+ACS +E G ++ +
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI 234
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+ L ++D+ G++++A S+ + K+ D +W +++ A +
Sbjct: 235 NGGIVERNLILE-NVLIDMFAACGEMDEAQSVFDNMKNR-DVISWTSIVTGF-----ANI 287
Query: 433 GEI-AARHLLELGPEK 447
G+I AR + PE+
Sbjct: 288 GQIDLARKYFDQIPER 303
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 260/485 (53%), Gaps = 22/485 (4%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
+S N LKQ+ +YL T H H+YA LIR L NL+YAR +FD IP T
Sbjct: 15 KSNHLNHLKQLQAYLT---TLGHAHTHFYAFKLIRFCTLTLSNLTYARLIFDHIPSLNTH 71
Query: 69 FLWTSLIRNHVLHAHFRQSIL-LYAKMHR-LGVLTSGFTFSSVLNACARVPSLLEAVICG 126
L+T++I + H S L L+ M R + F F L C C
Sbjct: 72 -LFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCPES--------CA 122
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC-GNMKAAKEFYDRMTEKNSVTWVAM 185
+ AQ + E V+ +A+V Y+ G + AK+ +D M++++ V++ AM
Sbjct: 123 AESL----HAQIVKSGFHEYPVVQ-TALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAM 177
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
++G+ + G+V A +VF E+ + D W A+ QNG IE+++ M E R +
Sbjct: 178 VSGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNG 237
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
V +V A+SAC +G +++ + +V + ++V NAL+ M+ KCG L A + F
Sbjct: 238 VTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEM 297
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKM--RNEGIEPNQVTFIGVLTACSHGGLVE 363
K + S++SMI FA HG+S A+ +F +M G+ P++VTF+G+L AC+HGGLVE
Sbjct: 298 NPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVE 357
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G FE+M + +GI+P EH C++DLLGR+G+ ++A ++ D WG+LL
Sbjct: 358 KGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNG 417
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
CKVH +L E AA+ L+E+ P G +LAN+Y +GKW + V + + + K P
Sbjct: 418 CKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVP 477
Query: 484 GCSWI 488
GCSWI
Sbjct: 478 GCSWI 482
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 261/478 (54%), Gaps = 46/478 (9%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-----VLTSGFTFSSV 109
AR+VFD +P+ + WT+L++ +V + + L+ KM V+ GF
Sbjct: 98 ARKVFDLMPE-RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGR 156
Query: 110 LNACARVPSLLE--------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
++ ++ ++ ++I G K G +D+A+ +FD M+ER+VI+W+ MV GY
Sbjct: 157 IDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQN 216
Query: 162 GNMKAAKEFYDRMTEKNSVTWV-------------------------------AMIAGYG 190
+ A++ +D M EK V+W AMI+G G
Sbjct: 217 NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLG 276
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ GE+ +A++VFD + E + + W + + +NG+ A++++ +M+++ VR + ++
Sbjct: 277 QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+S C L + + + D YV++ L+ M+ KCG L + F R +KD
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+I ++S+I+ +A HG +EAL +F +M G +PN+VTF+ L+ACS+ G+VE+G K +
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
E M VFG+KP+T H CMVD+LGR+G+ +A +I DA WG+LLGAC+ H
Sbjct: 457 ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
++ E A+ L+E+ PE +G LL+N+YAS G+W D ++ ++ +KSPGCSW
Sbjct: 517 LDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSW 574
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 160/311 (51%), Gaps = 21/311 (6%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
P I ++IG + +A++LFDS +++ SW++MVAGY + A++ +D M +
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD 76
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
+N ++W +++GY K GE+ EA+KVFD + E + W A+ YV NG A ++ M
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
++N V ++G + Q G ++ A L + + D+ N ++IH K G +
Sbjct: 137 PEKNKVSWTVMLIGFL----QDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRV 188
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
D A F + + VI++++M+T + + + +A +F M E +V++ +L
Sbjct: 189 DEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGY 244
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
G +ED + FE+M +KP+ M+ LG+ G++ KA + K+ DA +
Sbjct: 245 VQNGRIEDAEELFEVMP----VKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERNDA-S 298
Query: 417 WGALLGACKVH 427
W ++ K+H
Sbjct: 299 WQTVI---KIH 306
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR+VFD + K + W ++I+ H + +++ L+ M + GV + T S+L+
Sbjct: 281 IAKARRVFDSM-KERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 112 ACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
CA + SL ++ Y K G + ++ +FD +++I
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM-----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
W+++++GYA+ G + A + + M T+ N VT+VA ++ G V E K+++ +
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 206 S-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
+P + +A M + G A+EM M E +++GA +QL
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDV 519
Query: 261 VEMAA 265
E A
Sbjct: 520 AEFCA 524
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 264/484 (54%), Gaps = 22/484 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ K N L Q+H+ ++ + K +H+ LI L L AR VFD P
Sbjct: 58 LLSSCKHLNPLLQIHAQIIVSGFK----HHHSITHLINLYSL-FHKCDLARSVFDSTPN- 111
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
++ LW S+IR + + +++ +Y M G L + ++
Sbjct: 112 PSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGA-------------GLVD 158
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
Y+K+G + A+ +FD M +R+V++W+AM+AG + + A+ +D+M +++ V+W M
Sbjct: 159 MYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTM 218
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
+AGY G E ++FD++ + + W + Y+QNG+AK AI + MR EN +
Sbjct: 219 MAGYAHNGCFVEVLELFDKMKLGNVT-WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNS 277
Query: 246 VAMVGAISACTQLGDV-EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
V V + A L E A A + G T V N+LI M++KCG LD + + F+
Sbjct: 278 VTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNT-LVGNSLIDMYAKCGQLDYSEKLFN 336
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+ +KD +S+++M++ +A HG A+ +F M+ ++ + V+F+ VL+AC H GLVE+
Sbjct: 337 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEE 396
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G K F M+ + IKP EH CMVDLLGR+G ++ I DAG WGALLG+C
Sbjct: 397 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSC 456
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
++H N +LGE+A HL++L P + +L++IYA G+W D+ + +++ KK+PG
Sbjct: 457 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 516
Query: 485 CSWI 488
CSW+
Sbjct: 517 CSWV 520
>gi|218186878|gb|EEC69305.1| hypothetical protein OsI_38371 [Oryza sativa Indica Group]
Length = 560
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/494 (32%), Positives = 258/494 (52%), Gaps = 46/494 (9%)
Query: 37 YAQFLIRLLQLPG----------DNLSYARQVFDQIPKCKTQ-FLWTSLIRNHVLHAHFR 85
+A LIR L LP + +AR VFD +P +LWT+ I + H
Sbjct: 31 HAHLLIRGLPLPARAAVALVASSSSPRHARAVFDSVPAASANVYLWTATISAYARHTSSS 90
Query: 86 QS---------ILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------------- 121
S + L+A M G + FT +SV+ C++V ++ E
Sbjct: 91 SSHALEVAGEAVALFALMLWSGPRPNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGLGC 150
Query: 122 -------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
A++ Y IGL+ DA+R+FD M +NV+ + MVA G+M AA+E +D M
Sbjct: 151 SSVHVGAALLDLYGNIGLVGDARRVFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGM 210
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E++ ++W +++GY G+ +++FDE++ + + W M + G ++++
Sbjct: 211 AERDPISWNTLMSGYLHLGDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFN 270
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
MR M +SAC QLG + +A + + + C + +V N+LI M++KCG
Sbjct: 271 RMRATGFEPDAATMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCG 330
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A F+ KD +SY+ MI AFA HG +++ALD+F M + G++P+ VTF+GVL+
Sbjct: 331 CISQAQFLFTETYPKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLS 390
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC+H GLVE G FELM + ++ +H C+VDL GR+G +E+AH + A
Sbjct: 391 ACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHA 450
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
G WGALL AC+ H + ++GEIAA+ L+ + P+ GN LL N A +W E V++ +
Sbjct: 451 GVWGALLNACRKHCHVDVGEIAAKELIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQLSM 510
Query: 475 SETEKKKSPGCSWI 488
++K+ WI
Sbjct: 511 ----RRKTFDTFWI 520
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/502 (33%), Positives = 274/502 (54%), Gaps = 29/502 (5%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN-----LSYARQVFDQIPKCKTQFL 70
LKQ+H+ ++ + + L + + G N + YA Q+F QIP+ T F+
Sbjct: 17 LKQIHALMIVNGLTSNVGF-LRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDT-FM 74
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC-------------ARVP 117
W + IR ++ LYA+M + V FTF VL AC RV
Sbjct: 75 WNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVL 134
Query: 118 SL--------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L ++ + K G + A +FD + +V++WSA++AGYA G++ A++
Sbjct: 135 RLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSVARK 194
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D M +++ V+W MI Y K GE+ A+++FDE D W A+ YV + A
Sbjct: 195 LFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLNREA 254
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIH 288
+E++ M EV M+ +SAC LGD+E + AK ++ + + NAL+
Sbjct: 255 LELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNALVD 314
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M++KCG + A R F I++KDV+S++S+I+ A HG ++E+L +F +M+ + P++VT
Sbjct: 315 MYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDEVT 374
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+GVL ACSH G V++G + F LM + I+P H C+VD+LGR+G L++A + I
Sbjct: 375 FVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIASM 434
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
K +A W +LLGACKVH + EL + A LL + +++G+ LL+N+YAS G+W +E
Sbjct: 435 KIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNVYASQGEWDGAE 494
Query: 469 IVKMMISETEKKKSPGCSWISS 490
V+ ++ + K+ G S++ +
Sbjct: 495 NVRKLMDDNGVTKNRGSSFVEA 516
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 269/483 (55%), Gaps = 17/483 (3%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL----PGDNLSYARQVFDQIPKCKT 67
T LK +H+ + H++A L ++ + P L YA ++F QI + T
Sbjct: 7 TMQALKLIHALAFRA------NLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNT 60
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGY 127
F + +LIR + + QS+ L+ +M R V GFTF+ +L +R+ L ++
Sbjct: 61 -FFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASD 119
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
G + F ++ +A++ YA G AA + ++ M + V+W ++
Sbjct: 120 EIHGAVLKLGFCF------HLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVV 173
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
+ + GE+ A++VF E+ E D W M Y Q ++ A+E+++ MR VR EVA
Sbjct: 174 AHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVA 233
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
MV ISACT LGD+E + +++DE + NALI M++KCG +DLAW+ F+ ++
Sbjct: 234 MVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNME 293
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
K +I+++SMI+A A+HG +++A +F M GI P+ VTF+ +LTA +H G V+DG
Sbjct: 294 RKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYG 353
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
FE M R +G++ EH CMVD+LGR+G+LE+A+ LI C+ WGALL AC+++
Sbjct: 354 LFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIY 413
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+ E+GE + L+EL P++ G LL +IY + G+ ++ ++ + KK+ GCSW
Sbjct: 414 GDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSW 473
Query: 488 ISS 490
+ +
Sbjct: 474 VGA 476
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 273/494 (55%), Gaps = 25/494 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ--LPGDNLSYARQVFDQIP 63
L+ T +LKQ+H+ + + Q ++ L++LL + NL A +VF++I
Sbjct: 24 LLQTCDTIKKLKQIHT---QIIVNGFSQKNF---LLVKLLSFYITSGNLLNAHKVFERIE 77
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV 123
T +W +IR H + + LY +M + FT+S ++ CAR L E
Sbjct: 78 NPSTT-VWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLRE-- 134
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
G G + + ++++ A+ GY ++ A+ +D + ++N V+W
Sbjct: 135 --GEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGY---DGVRKARRVFDEIVDRNIVSWN 189
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+++AGY +CG+V A+++FDE+ E + W M Q G K A+ ++ MR+ V++
Sbjct: 190 SLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKL 249
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDE----GCCDRTNYVSNALIHMHSKCGYLDLA 299
+VA+V A+SAC +LGD+++ + ++DE G ++N+LIHM++ CG +D A
Sbjct: 250 DQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKA 309
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE---PNQVTFIGVLTAC 356
++ F ++ + IS++SMIT FA G ++EAL +F M+ G + P+ +TFIGVL AC
Sbjct: 310 YKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCAC 369
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
SH G V+ G FE M + +GI P EH CMVDLL R+G L++AH LI +
Sbjct: 370 SHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAV 429
Query: 417 WGALLGACKVHVNAELGEIAARHL-LELGPEK-TGNSALLANIYASMGKWKDSEIVKMMI 474
WGALLG C++H NAEL A+ L LEL P++ G LL+N+YA+ +W+D +V+ +
Sbjct: 430 WGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKM 489
Query: 475 SETEKKKSPGCSWI 488
E +K G SW+
Sbjct: 490 VEIGVRKPAGRSWV 503
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 275/499 (55%), Gaps = 37/499 (7%)
Query: 7 VPRSKTFNQLKQVHSYLLKTLTKPHDQYHY--YAQFLIRLLQLPGDN-LSYARQVFDQI- 62
+ R KT LKQ+H++ +KT Q H+ A L++ L L + YAR+ F QI
Sbjct: 22 ISRCKTTRHLKQIHAHFIKT-----GQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIH 76
Query: 63 -PKCKTQFLWTSLIR-------NHVLHAHFRQSILLYAKMHRLGVLTSG-FTFSSVLNAC 113
P C F W ++IR + + H + +++L ++ M G++ FTF VL AC
Sbjct: 77 HPNC---FSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKAC 133
Query: 114 ARVPSLLEA-VICGYT-KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE-F 170
A++ + E + G+ K+GL+ D S +V Y CG MK A F
Sbjct: 134 AKLARIEEGKQLHGFVVKLGLVSDE------------FVRSNLVRVYVMCGAMKDAHVLF 181
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
Y E N V W MI GY + G++R ++++FD + W M QNG+ K AI
Sbjct: 182 YQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAI 241
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
EM+ M+ +V + V +V + A ++LG +E+ + ++ + + + +ALI M+
Sbjct: 242 EMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMY 301
Query: 291 SKCGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
SKCG +D A + F I+NK + I++S++I A HG++++ALD F +M+ G+ P+ V +
Sbjct: 302 SKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVY 361
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
IGVL+ACSH GLVE+G + M + G+ P EH CMVDLLGR+G LE+A LI++
Sbjct: 362 IGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMP 421
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D ALLGACK+H N E+GE A+ L+ P +G+ L+N++AS G W+
Sbjct: 422 VKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVK 481
Query: 470 VKMMISETEKKKSPGCSWI 488
V++ + E + +K PGCSWI
Sbjct: 482 VRLKMKELDIRKDPGCSWI 500
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 260/492 (52%), Gaps = 44/492 (8%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-- 98
LI L L L A IP + +TSL+R +V H +I L+ +M
Sbjct: 85 LIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPERNHV 144
Query: 99 ---VLTSGFTFSSVLNACARVPSLLE--------AVICGYTKIGLMDDAQRLFDSMAERN 147
VL GF + +N ++ + A++ GY + G + +A+ LFD M +RN
Sbjct: 145 TYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRN 204
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
V+SW+AM++GYA G + A++ ++ M ++N V+W AM+ GY + G V +A+ +F+ + +
Sbjct: 205 VVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPD 264
Query: 208 -PDASC------------------------------WAAMTVCYVQNGYAKAAIEMYKVM 236
P A+C W+AM Y QN + A+ ++ M
Sbjct: 265 HPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREM 324
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+R + + + ++ C L + L + D + +ALI M+ KCG L
Sbjct: 325 LCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNL 384
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
D A R F+ + KDV+ ++SMIT +A HG +EAL +F +R + P+ +T+IGVLTAC
Sbjct: 385 DKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTAC 444
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
S+ G V++G + F M I+ H +CMVDLLGR+G +++A LI + DA
Sbjct: 445 SYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAII 504
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
WGAL+GAC++H NAE+ E+AA+ LLEL P G LL++IY S G+W+D+ ++ IS
Sbjct: 505 WGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISS 564
Query: 477 TEKKKSPGCSWI 488
KSPGCSWI
Sbjct: 565 RNLNKSPGCSWI 576
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 144/321 (44%), Gaps = 32/321 (9%)
Query: 105 TFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
T +V+ A AR+ L+ A G ++ A+ FD+M R S++A++AGY
Sbjct: 13 TAPAVVAANARIAWLVRA--------GNIEGARAAFDAMPLRTTASYNALIAGYFRNHLP 64
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYG-KCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQ 222
AA + RM ++ ++ A+IAG + + +A I P + ++ YV+
Sbjct: 65 DAALGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVR 124
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
+G AI ++ M + N V + G + A G V A K DE D+
Sbjct: 125 HGLLADAIRLFHQMPERNHVTYTVLLGGFLDA----GRVNEA---RKLFDE-MPDKDVVA 176
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
A++ + + G + A F + ++V+S+++MI+ +A +GK A +F M +
Sbjct: 177 RTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR-- 234
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
N+V++ +L G VED F M P+ MV G+ G ++ A
Sbjct: 235 --NEVSWTAMLVGYIQAGHVEDAEDLFNAMPD----HPVAACNAMMVG-FGQHGMVDAAK 287
Query: 403 SLIMDYKDFC--DAGTWGALL 421
++ ++ C D GTW A++
Sbjct: 288 AM---FERMCARDDGTWSAMI 305
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 278/542 (51%), Gaps = 69/542 (12%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ--LPGDNLSYARQVFDQIPKCK 66
+ K KQVH ++K+ + + A + LL + L AR VFD + K K
Sbjct: 40 KQKDLMAAKQVHDCIIKSRMEQN------AHVMNNLLHVYIECGRLQEARCVFDALVK-K 92
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL------- 119
+ W ++I +V H H ++ L+ +M GV + T+ +L ACA + +L
Sbjct: 93 SGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVH 152
Query: 120 -------LE-------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
LE A++ Y K G +++A+R+FD++ ++ISW+ M+ YA GN K
Sbjct: 153 ACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGK 212
Query: 166 AAKEFYDRMTEK----NSVTWV-----------------------------------AMI 186
A +M ++ N++T+V A++
Sbjct: 213 EAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALV 272
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
Y K G + +A+ VFD + D W M + ++G A +++ M+ E + +
Sbjct: 273 QMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAI 332
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+ ++AC G +E + +H + + V AL+HM+SK G +D A F R+
Sbjct: 333 MFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRM 392
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
K ++V+S+++MI+ A HG Q+AL++F +M G++P++VTF+ VL+ACSH GLV++G
Sbjct: 393 KVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGR 452
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
Q+ MT+V+GI+P H CMVDLLGR+G+L +A I + D TWGALLG+C+
Sbjct: 453 SQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRT 512
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
+ N ELGE+ A+ L+L P+ LL+NIYA GKW V+ M+ E +K PG S
Sbjct: 513 YGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRS 572
Query: 487 WI 488
WI
Sbjct: 573 WI 574
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 184/400 (46%), Gaps = 63/400 (15%)
Query: 88 ILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA---------------------VICG 126
++L ++ R G++T F + VL C + L+ A ++
Sbjct: 14 VVLMNRLQR-GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHV 72
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTW 182
Y + G + +A+ +FD++ +++ SW+AM+AGY + + A + M + N+ T+
Sbjct: 73 YIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTY 132
Query: 183 V-----------------------------------AMIAGYGKCGEVREAKKVFDEISE 207
+ A++ YGKCG + EA+++FD +
Sbjct: 133 MIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMN 192
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W M Y Q+G K A + M QE + + + V ++AC G ++ +
Sbjct: 193 HDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRV 252
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+H + + V AL+ M++K G +D A F R+K +DV+S++ MI AFA+HG+
Sbjct: 253 HRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRG 312
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
EA D+FL+M+ EG +P+ + F+ +L AC+ G +E K+ G++ T
Sbjct: 313 HEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALE-WVKKIHRHALDSGLEVDVRVGTA 371
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+V + +SG ++ A ++ D + +W A++ H
Sbjct: 372 LVHMYSKSGSIDDAR-VVFDRMKVRNVVSWNAMISGLAQH 410
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 151/457 (33%), Positives = 261/457 (57%), Gaps = 19/457 (4%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + A ++F ++P + W +++ + + +Q++ L+ +M V+ S T +
Sbjct: 78 NQVKEAERLFYEMP-LRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVV-SWNTIITA 135
Query: 110 LNACARVPSLLE--------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
L C R+ ++ G K G ++DA+ LFD M RNV+SW+AM+
Sbjct: 136 LVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMI 195
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
GYA + A + + RM E++ +W MI G+ + GE+ A+K+F E+ E + W A
Sbjct: 196 TGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTA 255
Query: 216 MTVCYVQNGYAKAAIEMY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
M YVQ+G ++ A+ ++ K++ ++ + V + AC+ L + + + + +
Sbjct: 256 MMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKT 315
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSR--IKNKDVISYSSMITAFADHGKSQEALD 332
+ V +ALI+M+SKCG L A + F + +D+IS++ MI A+A HG +EA++
Sbjct: 316 VFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAIN 375
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F +M+ G+ N VTF+G+LTACSH GLVE+G K F+ + + I+ +H C+VDL
Sbjct: 376 LFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDLC 435
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR+G+L++A ++I + WGALL C VH NA++G++ A +L++ P+ G +
Sbjct: 436 GRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTYS 495
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
LL+N+YAS+GKWK++ V+M + + KK PGCSWI
Sbjct: 496 LLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIE 532
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 188/358 (52%), Gaps = 30/358 (8%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ YAR+VF+++P+ + LWT++I ++ R++ L+ R + T+++++N
Sbjct: 17 IDYARKVFEEMPE-RDIGLWTTMITGYLKCGMIREARKLF---DRWDAKKNVVTWTAMVN 72
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
GY K + +A+RLF M RNV+SW+ MV GYA G + A + +
Sbjct: 73 --------------GYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLF 118
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
RM E+N V+W +I +CG + +A+++FD++ + D W M +NG + A
Sbjct: 119 RRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARA 178
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ M NV +S AM+ + +L + A + + +R N +I
Sbjct: 179 LFDQMPVRNV-VSWNAMITGYAQNRRLDE-------ALQLFQRMPERDMPSWNTMITGFI 230
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM--RNEGIEPNQVTF 349
+ G L+ A + F ++ K+VI++++M+T + HG S+EAL +F+KM NE ++PN TF
Sbjct: 231 QNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNE-LKPNTGTF 289
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
+ VL ACS + +G + +++++ + T ++ ++++ + G+L A + D
Sbjct: 290 VTVLGACSDLAGLTEGQQIHQMISKTV-FQDSTCVVSALINMYSKCGELHTARKMFDD 346
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 232/412 (56%), Gaps = 22/412 (5%)
Query: 99 VLTSGFTFSSVLNACARVPSL---------------------LEAVICGYTKIGLMDDAQ 137
V + FTFSS++ AC+ V L A++ Y G + +A+
Sbjct: 6 VSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEAR 65
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
R+FD M+ER+V +W+ M++ +A G+M +A++ +D M +N+ +W AMI GY + V
Sbjct: 66 RVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVES 125
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A+ +F ++ D W M CY QN + A+ ++ M+ + EV M ISAC
Sbjct: 126 AELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAH 185
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
LG +++ + + E D Y+ +ALI M++KCG LD + F +++ K++ ++S+
Sbjct: 186 LGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSI 245
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I A HG ++EAL MF +M+ E I+PN VTFI VL AC+H GLVE+G K+F M+R F
Sbjct: 246 IEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFS 305
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I P EH CMVDLLG++G LE A L+ + ++ WGALLG CK+H N ++ ++A
Sbjct: 306 IPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAV 365
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE-KKKSPGCSWI 488
L P +G LL N+YA + +W + ++ + E +K SPG SWI
Sbjct: 366 NESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWI 417
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 107/231 (46%), Gaps = 31/231 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ A +F Q+P + WT++I + + FR+++ ++ +M G+ T ++++
Sbjct: 122 NVESAELLFSQMPN-RDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 111 NACARVPSL----------LE-----------AVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA + +L +E A+I Y K G +D + +F + ++N+
Sbjct: 181 SACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLF 240
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEI 205
W++++ G A G + A + RM + N VT+++++ G V E +K F +
Sbjct: 241 CWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSM 300
Query: 206 SE-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
S P+ + M + G + A+E+ + MR E + A++G
Sbjct: 301 SRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGG 351
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 43/243 (17%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H Y ++ D Y LI + G +L + VF ++ K K F W S+I
Sbjct: 193 KEIHLYAMEM---GFDLDVYIGSALIDMYAKCG-SLDKSLVVFFKLRK-KNLFCWNSIIE 247
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+H + +++ ++++M R + +G TF SVL AC T GL+++
Sbjct: 248 GLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGAC--------------THAGLVEEG 293
Query: 137 QRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKEFYDRM-TEKNSVTWVAMIAGYG 190
++ F SM+ I + MV G ++ A E M E NSV W A++ G
Sbjct: 294 RKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCK 353
Query: 191 KCGEVREAKKVFDE--ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
++ A+ +E + EP+ S GY + MY E R SEVA
Sbjct: 354 LHRNLKIAQVAVNESKVLEPNNS------------GYYTLLVNMYA----EVNRWSEVAN 397
Query: 249 VGA 251
+ A
Sbjct: 398 IRA 400
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 263/463 (56%), Gaps = 33/463 (7%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + AR++FD +P K W ++I + Q++ L+ KM V++ +++V
Sbjct: 143 NRIEEARRLFDAMP-VKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVS----WNTV 197
Query: 110 LNACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+ A + + EA ++ G +K G +DDA+ LFD M RNV+SW+
Sbjct: 198 ITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWN 257
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
M+ GYA + A + +++M E+ +W MI G+ + G++ A F ++S +
Sbjct: 258 TMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVT 317
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQ-ENVRISEVAMVGAISACTQLGDV----EMAAIL 267
W A+ +VQ+G ++ A++++ M+ NV+ +E V + AC++L + ++ I+
Sbjct: 318 WTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQII 377
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS--RIKNKDVISYSSMITAFADHG 325
+K V + D V +ALI+M+SKCG L+LA + F I ++DV+S++ MI A+A HG
Sbjct: 378 SKTVYQEVAD----VVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHG 433
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+A+ +F +M+ G P+ VT+I +L+ACSH GLV++G K FE + R IK +H
Sbjct: 434 HGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHF 493
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
TC+VDL GR+G+L++A I + A W ALL C VH + +LG++ A LLE P
Sbjct: 494 TCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEP 553
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E G +L+NIYAS GKW+++ V+M + + KK PGCSWI
Sbjct: 554 ENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWI 596
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 189/375 (50%), Gaps = 29/375 (7%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
ARQVF+++P + WT++I ++ + G++ T +A
Sbjct: 85 ARQVFEEMPD-RDVVSWTAVITGYI----------------KCGMIEEAKTLFDRNDAIK 127
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
V + A++ GY + +++A+RLFD+M +NVISW+ M+ GYA G + A + +++M
Sbjct: 128 NVVTW-TALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKM 186
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E+N V+W +I + + V EA+++F+ + E D W M +NG A ++
Sbjct: 187 PERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFD 246
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M NV +S M+ + +L + A + E +R N +I + G
Sbjct: 247 KMPVRNV-VSWNTMIIGYAQNMRLDE-------AFKLFEQMPERELSSWNTMITGFIQNG 298
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR-NEGIEPNQVTFIGVL 353
L+ A F ++ NK+V++++++I+ G+S+EAL +F +M+ ++PN+ TF+ VL
Sbjct: 299 KLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVL 358
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK-DFC 412
ACS + +G + +++++ + + + ++ ++++ + G+LE A + D
Sbjct: 359 GACSKLAALCEGQQIHQIISKTV-YQEVADVVSALINMYSKCGELELARKIFDDGSIGHR 417
Query: 413 DAGTWGALLGACKVH 427
D +W ++ A H
Sbjct: 418 DVVSWNGMIAAYAHH 432
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 253/454 (55%), Gaps = 22/454 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR +F+++P K W ++I +V + L+ +M ++++++N
Sbjct: 249 MTEARNLFNEMP-TKNLVSWNAMIGAYVRENQIDDAYKLFMEMPE----KDSVSWTAMIN 303
Query: 112 ACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
RV LL+A +I GY + G MD+A +F ++ R+ + W++M
Sbjct: 304 GYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSM 363
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+ GYA+CG A + M K+ V+W MIA Y + G++ +A ++F+E+ E + W
Sbjct: 364 ITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWN 423
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
++ YVQNG A+ + +M+Q+ + + +V + A L + + L +
Sbjct: 424 SLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKT 483
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
+V NA++ M++K G + A F+ IK KDV+S++S+I +A +G +EA+++F
Sbjct: 484 GFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELF 543
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
M GI P++VTF G+L+AC+HGG V+ G F+ MT + IKP +EH C+++LLGR
Sbjct: 544 EVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGR 603
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
G+LE+A ++ K A WGALL AC++H N EL + +A LL L P+ N LL
Sbjct: 604 VGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLL 663
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+N++A G+W E V++++ E + +K PGCSWI
Sbjct: 664 SNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWI 697
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 170/360 (47%), Gaps = 48/360 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++F+ +P + +LI + FR++ L+ +M V++
Sbjct: 124 LEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVS---------- 173
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+++ GYTK G M + F++M ERNV+SW+ MV GY G++ +A F+
Sbjct: 174 --------WNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFF 225
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
++ N V+WV M++G+ G + EA+ +F+E+ + W AM YV+ A +
Sbjct: 226 KKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYK 285
Query: 232 MYKVMRQENVRISEVAMV-GAISACTQLGDVEM------------AAILAKHVDEGCCDR 278
++ M +++ +S AM+ G + L E+ A++ ++ G D
Sbjct: 286 LFMEMPEKD-SVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDE 344
Query: 279 TNYVS-----------NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
N + N++I ++ CG D A R F + KD++S+++MI A+A G+
Sbjct: 345 ANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQM 404
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+AL+MF NE E N V++ ++T GL + F LM + G KP + C
Sbjct: 405 DKALEMF----NEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQ-GEKPDQTTIVC 459
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 148/293 (50%), Gaps = 20/293 (6%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I Y K G + +A+ LFD M +RN++SW++M+AGY + ++ A +DRM +++ +
Sbjct: 51 SMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYS 110
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEP-DASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W MI Y + GE+ +A+++F+ + + D C A+ Y + + A +++ M +N
Sbjct: 111 WTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKN 170
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V V+ +S T+ G ++ L E +R N ++ + G LD AW
Sbjct: 171 V----VSWNSILSGYTKNGKMQ----LGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAW 222
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +I +V+S+ +M++ FA +G+ EA ++F NE N V++ ++ A
Sbjct: 223 MFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLF----NEMPTKNLVSWNAMIGAYVREN 278
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--IMDYKDF 411
++D K F M + T M++ R G+L +A + +M YK+
Sbjct: 279 QIDDAYKLFMEMPEKDSVS-----WTAMINGYVRVGKLLQAREILNLMPYKNI 326
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 148/332 (44%), Gaps = 52/332 (15%)
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
V + + ++ G ++ A + +MTE+N VT+ +MI+ Y K G + A+++FD + +
Sbjct: 15 VFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
+ W +M Y+ N + A ++ M + ++ + I+ T++G++E A L
Sbjct: 75 RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDI----YSWTLMITCYTRIGELEKAREL 130
Query: 268 AKHVDEGCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ D+ + V NALI ++K A + F + K+V+S++S+++ + +GK
Sbjct: 131 FNLLP----DKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGK 186
Query: 327 SQEALDMFLKMRNEGI---------------------------EPNQVTFIGVLTACSHG 359
Q L F M + PN V+++ +L+ +H
Sbjct: 187 MQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHY 246
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG---RSGQLEKAHSLIMDYKDFCDAGT 416
G + + F M T++L ++G R Q++ A+ L M+ + D+ +
Sbjct: 247 GRMTEARNLFNEMP--------TKNLVSWNAMIGAYVRENQIDDAYKLFMEMPE-KDSVS 297
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKT 448
W A++ V V L AR +L L P K
Sbjct: 298 WTAMINGY-VRVGKLL---QAREILNLMPYKN 325
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 260/480 (54%), Gaps = 27/480 (5%)
Query: 15 QLKQVHSYLLKTLTK----PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
+LKQ+H++LLKT + P + F + SYA+ +F + +
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAF--------NSSFSYAKLIFQLLDASEVTH- 80
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-VICGYT- 128
W + +R+ +I L+ ++ + +T S VL AC+R+ + ++ GY
Sbjct: 81 WNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVE 140
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K+GL + N+ + +V YA CG + A++ +D+M +++ +TW MIA
Sbjct: 141 KLGL------------QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
K G+ A K+F E+ E + W +M Y Q G +K AI+++ M + +EV +
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V + AC +G++ + + + ++ V N LI M+ KCG L+ A R F ++
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEE 308
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+ V+S+S+MI A HG++++AL +F KM N G++PN VTFIG+L ACSH G+VE G K
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKY 368
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F MTR +GI P EH CMVDL R+G L++AH IM+ + WGALLG CKVH
Sbjct: 369 FASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK 428
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N +L E A RHL +L P G +L+NIYA G+W+D V+ ++ + KK+PG S I
Sbjct: 429 NIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSI 488
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 253/478 (52%), Gaps = 45/478 (9%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-----VLTSGFTFSSV 109
AR VF+ +P+ + WT++++ +V ++ LL+ +M V+ G
Sbjct: 98 ARNVFEIMPE-RNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGR 156
Query: 110 LNACARVPSLLEA--------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
++ ++ ++ +I G + G +D+A+ +FD M ERNVI+W+ M+ GY
Sbjct: 157 IDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQN 216
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGY-------------------------------G 190
+ A++ ++ M EK V+W +M+ GY G
Sbjct: 217 KRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALG 276
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ GE+ +A++VFD++ + D + W M Y + G+ A+E++ M+++ VR S +++
Sbjct: 277 EVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLIS 336
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+S C L ++ + H+ D YV++ L+ M+ KCG L A F R +KD
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKD 396
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+I ++S+I+ +A HG +EAL +F +M G PN+VT I +LTACS+GG +E+G + FE
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFE 456
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
M F + P EH +C VD+LGR+G+++KA LI DA WGALLGACK H
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRL 516
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L E+AA+ L E+ PE G LL++I AS KW D ++ + K PGCSWI
Sbjct: 517 DLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWI 574
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 150/302 (49%), Gaps = 22/302 (7%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I ++IG +++A++ FDS+ + + SW+++V+GY G + A++ +D M E+N V+W
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWN 83
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+++GY K + EA+ VF+ + E + W AM YVQ G A ++ M + N +
Sbjct: 84 GLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERN-EV 142
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
S M G + ++ D A+ + + + S +I + G +D A F
Sbjct: 143 SWTVMFGGLIDGGRIDD-------ARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIF 195
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
++ ++VI++++MIT + + + A +F M E +V++ +L + G +E
Sbjct: 196 DEMRERNVITWTTMITGYGQNKRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIE 251
Query: 364 DGCKQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
D + FE+M P+ + C M+ LG G++ KA + D + D TW ++
Sbjct: 252 DAEEFFEVM-------PMKPVIACNAMIVALGEVGEIVKARR-VFDQMEDRDNATWRGMI 303
Query: 422 GA 423
A
Sbjct: 304 KA 305
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 281/554 (50%), Gaps = 82/554 (14%)
Query: 5 YLVPRSKTFNQLKQVHSYLL--KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQI 62
+L + + L+QVH+ ++ ++ P++ L + + L N Y+ +F I
Sbjct: 29 FLAKQCSSTKTLQQVHTQMVVNSSIHTPNNH------LLSKAIHL--KNFPYSSLLFSHI 80
Query: 63 PKCKTQFLWTSLIRNHVLHAH-FRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
+ + +IR H + ++ L+ +M L + FTF +CA + SL
Sbjct: 81 APHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSH 140
Query: 122 A---------------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
A +I Y + GL+ A+++FD + R+ +SW++M+AGYA
Sbjct: 141 ACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAK 200
Query: 161 CGNMKAAKEFYDRMTEK----------------------------------------NSV 180
G + A E + M + NS
Sbjct: 201 AGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSY 260
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
A+I+ Y KCGE+ A+++FD ++ D W A+ Y QNG A AI ++ M+++
Sbjct: 261 IGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDC 320
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR----TNYVSNALIHMHSKCGYL 296
V +++ + +SAC +G ++ L K +DE R +V+ ALI M++K G L
Sbjct: 321 VTANKITLTAVLSACATIGALD----LGKQIDEYASQRGFQHDIFVATALIDMYAKSGSL 376
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG--IEPNQVTFIGVLT 354
D A R F + K+ S+++MI+A A HGK++EAL +F M +EG PN +TF+G+L+
Sbjct: 377 DNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLS 436
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC H GLV++G + F++M+ +FG+ P EH +CMVDLL R+G L +A LI + D
Sbjct: 437 ACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDK 496
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
T GALLGAC+ N ++GE R +LE+ P +GN + + IYA++ W+DS +++++
Sbjct: 497 VTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLM 556
Query: 475 SETEKKKSPGCSWI 488
+ K+PGCSWI
Sbjct: 557 RQKGITKTPGCSWI 570
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 263/494 (53%), Gaps = 27/494 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
K L Q+H + +K+ D Y + + ++ D L YAR++ P+ F+
Sbjct: 183 KNLRALTQIHGFFIKSGVD-TDSY-FIGKLILHCAISISDALPYARRLLLCFPE-PDAFM 239
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNACARVPSL---------- 119
+ +L+R + S+ ++ +M R G + F+F+ V+ A A SL
Sbjct: 240 FNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQA 299
Query: 120 -----------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
+I Y + G + A+++FD M + N+++W+A+V ++ A+
Sbjct: 300 LKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAR 359
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
E +D+M +N +W M+AGY K GE+ AK++F E+ D W+ M V + NG
Sbjct: 360 EIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNE 419
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
+ ++ + + +R +EV++ G +SAC+Q G E L V++ V+NALI
Sbjct: 420 SFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALID 479
Query: 289 MHSKCGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+S+CG + +A F ++ K ++S++SMI A HG +EA+ +F +M G+ P+++
Sbjct: 480 MYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEI 539
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
+FI +L ACSH GL+++G F M RV+ I+P EH CMVDL GRSG+L+KA+S I
Sbjct: 540 SFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQ 599
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD- 466
A W LLGAC H N EL E + L EL P +G+ LL+N+YA+ GKWKD
Sbjct: 600 MPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDV 659
Query: 467 SEIVKMMISETEKK 480
+ I K MI + KK
Sbjct: 660 ASIRKSMIVQRIKK 673
>gi|15240281|ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g37570
gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 259/490 (52%), Gaps = 63/490 (12%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-FTFSSVLNACA-- 114
VF+++P T +LW LI+ + F +++ + +M R G+ +TF V+ C+
Sbjct: 65 VFERVPSPGT-YLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNN 123
Query: 115 ---RVPSLLE-----------------------------------------------AVI 124
RV S + A++
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
Y K G +++A+ +FD M ERN+ SW+A+V G G++ AK+ +D M +++ +++ +
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
MI GY K G++ A+ +F+E D W+A+ + Y QNG A +++ M +NV+
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 303
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN-----YVSNALIHMHSKCGYLDLA 299
E MVG +SAC+Q+G E L + VD R N YV ALI M++KCG++D A
Sbjct: 304 EFIMVGLMSACSQMGCFE----LCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRA 359
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F + +D++SY SM+ A HG EA+ +F KM +EGI P++V F +L C
Sbjct: 360 AKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
LVE+G + FELM + + I +H +C+V+LL R+G+L++A+ LI A WG+
Sbjct: 420 RLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGS 479
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LLG C +H N E+ E+ ARHL EL P+ G+ LL+NIYA++ +W D ++ ++E
Sbjct: 480 LLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGI 539
Query: 480 KKSPGCSWIS 489
K G SWIS
Sbjct: 540 TKICGRSWIS 549
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 273/536 (50%), Gaps = 61/536 (11%)
Query: 7 VPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
+P+ NQ+KQ+H+ +++ H+ H + + L NL A +VF+Q+ +
Sbjct: 26 LPKCANLNQVKQLHAQIIRR--NLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPN 81
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA------------ 114
L SLIR H ++ Q+ ++++M R G+ FT+ +L AC+
Sbjct: 82 VH-LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 115 ------------RVPSLL------------------------------EAVICGYTKIGL 132
VP+ L +++ G K G
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
+ DA+RLFD M +R++ISW+ M+ GYA C M A E +++M E+N+V+W M+ GY K
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 193 GEVREAKKVFDEISEP--DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
G++ A+ +FD++ P + W + Y + G K A + M ++ A++
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
++ACT+ G + + + + YV NAL+ M++KCG L A+ F+ I KD
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
++S+++M+ HG +EA+++F +MR EGI P++VTFI VL +C+H GL+++G F
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
M +V+ + P EH C+VDLLGR G+L++A ++ + WGALLGAC++H
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
++ + +L++L P GN +LL+NIYA+ W+ ++ + +K G S
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 276/487 (56%), Gaps = 21/487 (4%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
++ N LKQ+H++ L LT H+ + L P +L YA+++FDQ+P+ T F
Sbjct: 27 QSMNHLKQIHAHSL--LTDLHNHSVILGKMLRFAAVSPSGDLPYAQRLFDQMPQPNT-FF 83
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV------PSLLEAVI 124
+ ++IR + + + L+ +M + V FTF+ ++ A +RV PS LE
Sbjct: 84 YNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTLEC-- 141
Query: 125 CGYTKIGLMDDAQ-RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
D+ +F ++ +A++ YA G+ AA ++ + V+W
Sbjct: 142 ---------DEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVDVVSWS 192
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
++ + + GE+ A++VFD++ E D W AM Y + ++ A+E++ M +R
Sbjct: 193 GLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRP 252
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
EV +V ISACT LGDVE + +++E + NALI+M++KCG +D AWR F
Sbjct: 253 DEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDRAWRVF 312
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ +K K +I+++SMI+A A+HG +++A ++F M N GI P+ +TF+ +L A +H GLV+
Sbjct: 313 NNMKRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVD 372
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G + F++M R +GI+ EH C+VD+LGR+G+LE+A+ LI+ + WGALL A
Sbjct: 373 EGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALLAA 432
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C+++ + +GE + LLEL P++ G LL +IY + G+ ++ ++ + E+ K+P
Sbjct: 433 CRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQESGAMKNP 492
Query: 484 GCSWISS 490
G SW+ +
Sbjct: 493 GYSWVGA 499
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 289/542 (53%), Gaps = 68/542 (12%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R ++ Q ++VH+ +LK+ +P+ Y L+ + G +L+ AR+VFD I + +
Sbjct: 59 RLRSLEQGREVHAAILKSGIQPN---RYLENTLLSMYAKCG-SLTDARRVFDSI-RDRNI 113
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE------- 121
WT++I V ++ Y M G TF S+LNA P LL+
Sbjct: 114 VSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTN-PELLQLGQKVHM 172
Query: 122 ---------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
+++ Y K G + A+ +FD + E+NV++W+ ++AGYA G +
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232
Query: 167 AKEFYDRMTE----KNSVTWVAMI---------------------AGYG----------- 190
A E + M + N +T+ +++ +GYG
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292
Query: 191 ---KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
KCG + EA+K+F ++ D W AM Y Q G+ AI +++ M+Q+ ++ ++
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMT 352
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+++C+ ++ + + + + Y+ +AL+ M++KCG +D A F+++
Sbjct: 353 FTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS 412
Query: 308 NKDVISYSSMITAF-ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
++V++++++IT A HG+ +EAL+ F +M+ +GI+P++VTF VL+AC+H GLVE+G
Sbjct: 413 ERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 472
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
K F M +GIKP+ EH +C VDLLGR+G LE+A ++I+ WGALL AC+V
Sbjct: 473 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRV 532
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H + E GE AA ++L+L P+ G L++IYA+ G+++D+E V+ ++ + + K PG S
Sbjct: 533 HSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 592
Query: 487 WI 488
WI
Sbjct: 593 WI 594
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 271/488 (55%), Gaps = 25/488 (5%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ--LPGDNLSYARQVFDQIPKCKTQF 69
T +LKQ+H+ + + Q ++ L++LL + NL A +VF++I T
Sbjct: 46 TIKKLKQIHT---QIIVNGFSQKNF---LLVKLLSFYITSGNLLNAHKVFERIENPSTT- 98
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
+W +IR H + + LY +M + FT+S ++ CAR L E G
Sbjct: 99 VWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLRE----GEQV 154
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
G + + ++++ A+ GY ++ A+ +D + ++N V+W +++AGY
Sbjct: 155 HGRVVANGYCTNVFVRTSLVNLYAIAGGY---DGVRKARRVFDEIVDRNIVSWNSLLAGY 211
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
+CG+V A+++FDE+ E + W M Q G K A+ ++ MR+ V++ +VA+V
Sbjct: 212 VRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALV 271
Query: 250 GAISACTQLGDVEMAAILAKHVDE----GCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
A+SAC +LGD+++ + ++DE G ++N+LIHM++ CG +D A++ F
Sbjct: 272 AALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIG 331
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE---PNQVTFIGVLTACSHGGLV 362
++ + IS++SMIT FA G ++EAL +F M+ G + P+ +TFIGVL ACSH G V
Sbjct: 332 MQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFV 391
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
+ G FE M + +GI P EH CMVDLL R+G L++AH L + WGALLG
Sbjct: 392 DQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLG 451
Query: 423 ACKVHVNAELG-EIAARHLLELGPEK-TGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
C++H NAEL +A + +LEL P++ G LL+N+YA+ +W+D +V+ + E +
Sbjct: 452 GCRIHKNAELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVR 511
Query: 481 KSPGCSWI 488
K G SW+
Sbjct: 512 KPAGRSWV 519
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 257/485 (52%), Gaps = 52/485 (10%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR +FD+ + WT+L+ + ++ L+ +M V++ ++++L
Sbjct: 82 LHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVS----WNTMLE 137
Query: 112 ACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
A + +A ++ + G MD A++LFD M ERNV++W+ M
Sbjct: 138 AYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTM 197
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
VAG A G++ A+ +D M E+N V+W AMI+GY + + EA +F ++ D + W
Sbjct: 198 VAGIARSGSVDEARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWN 257
Query: 215 AMTVCYVQ--------------------------NGY-----AKAAIEMYKVMRQENVRI 243
M ++Q NGY ++ A++++ M E +R
Sbjct: 258 IMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRP 317
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
++V +GA+ AC+ L + + + + + ++ + L+++++KCG + LA + F
Sbjct: 318 NQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVF 377
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
K KDVIS++ MI A+A HG EA+ ++ KM+ +G +PN VT++G+L+ACSH GLV+
Sbjct: 378 DLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVD 437
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G + FE M + I EH TC++DL R+G+L A LI K + W ALLG
Sbjct: 438 EGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGG 497
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C H N +G++AAR+LLE P G LL NIYAS GKWK++ ++ +++ KK P
Sbjct: 498 CNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQP 557
Query: 484 GCSWI 488
GCSWI
Sbjct: 558 GCSWI 562
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 170/359 (47%), Gaps = 48/359 (13%)
Query: 122 AVICGYTKIGLMDDAQRLFDSM-AERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
A++ Y + G++ DA+ LFD A RNV++W+A+++GYA G + A+ + RM E+N V
Sbjct: 71 ALVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVV 130
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+W M+ Y G VR+A +FD + DA W + V++G A +++ M + N
Sbjct: 131 SWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRMPERN 190
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V +A ++ + G V+ A L +G +R NA+I +++ +D A
Sbjct: 191 V----MAWTTMVAGIARSGSVDEARALF----DGMPERNVVSWNAMISGYARNHRIDEAH 242
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM--RN------------------- 339
F ++ +D+ S++ MIT F + A D+F KM RN
Sbjct: 243 DLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSET 302
Query: 340 ----------EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV-FGIKPLTEHLTCM 388
EGI PNQVTF+G + ACS+ + +G + +++ + F E + +
Sbjct: 303 ALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIE--STL 360
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
++L + G++ A + D D +W ++ A H +G + A HL E EK
Sbjct: 361 MNLYAKCGEIRLARK-VFDLSKEKDVISWNGMIAAYAHH---GVG-VEAIHLYEKMQEK 414
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 239/440 (54%), Gaps = 14/440 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A +VF I K K W S+I V +++ L+ KM V S T VL
Sbjct: 183 DLDSACKVFTTI-KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 241
Query: 111 NACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+ACA++ L +C Y + ++ N+ +AM+ Y CG+++ AK
Sbjct: 242 SACAKIRDLEFGRRVCSYIE-----------ENRVNVNLTLANAMLDMYTKCGSIEDAKR 290
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D M EK++VTW M+ GY + A++V + + + D W A+ Y QNG A
Sbjct: 291 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEA 350
Query: 230 IEMYKVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
+ ++ ++ Q+N++++++ +V +SAC Q+G +E+ + ++ + YV++ALIH
Sbjct: 351 LLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIH 410
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKCG L+ A F+ ++ +DV +S+MI A HG EA+DMF KM+ ++PN VT
Sbjct: 411 MYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVT 470
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F V ACSH GLV++ F M +GI P +H C+VD+LGRSG LEKA I
Sbjct: 471 FTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAM 530
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
WGALLGACK+H N L E+A LLEL P G LL+NIYA GKW +
Sbjct: 531 PIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVS 590
Query: 469 IVKMMISETEKKKSPGCSWI 488
++ + T KK PGCS I
Sbjct: 591 ELRKHMRVTGLKKEPGCSSI 610
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 136/298 (45%), Gaps = 20/298 (6%)
Query: 161 CGNMKAAKEFYDRM------TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
C +++ K+ + M ++ S + + IA + A+KVFDEI +P++ W
Sbjct: 41 CSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWN 100
Query: 215 AMTVCYVQNGYAKAAIEMY--KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
+ Y +I + V + ++ I A ++ + + L
Sbjct: 101 TLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAI 160
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ +V+N+LIH + CG LD A + F+ IK KDV+S++SMI F G +AL+
Sbjct: 161 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 220
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG---CKQFELMTRVFGIKPLTEHLTCMV 389
+F KM +E ++ + VT +GVL+AC+ +E G C E RV L M+
Sbjct: 221 LFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIE-ENRVNVNLTLA---NAML 276
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
D+ + G +E A L D + D TW +L + + E AAR +L P+K
Sbjct: 277 DMYTKCGSIEDAKRLF-DAMEEKDNVTWTTMLDGYAISEDYE----AAREVLNAMPKK 329
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 267/487 (54%), Gaps = 27/487 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQ----FLIRLLQLPGDNLSYARQVFDQ 61
L+ +SK+ L Q+H+ LL+ + ++ Q L RL D + FD+
Sbjct: 53 LIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRL-----DCSVFVFNTFDE 107
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
F ++++I +HV F ++ Y++M GV + FTFSSVL +C+ +
Sbjct: 108 ----PNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESG--K 161
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+ C K+GL D + + +V YA G++ A++ +D+M E++ V+
Sbjct: 162 VLHCQAIKLGLGSD------------LYVRTGLVDVYARGGDVVCARQLFDKMPERSLVS 209
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
M+ Y K GE+ +A+ +F+ + E D CW M Y Q+G ++++++ M
Sbjct: 210 LTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKA 269
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+EV ++ +SAC QLG +E + +++ +V ALI M+SKCG L+ A
Sbjct: 270 IPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARL 329
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F RI++KDV++++SMI +A HG SQ AL +F +M G +P +TFIG+L+AC HGGL
Sbjct: 330 VFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGL 389
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
VE+G F LM +GI+P EH CMV+LLGR+G LE+A+ L+ + D WG LL
Sbjct: 390 VEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
G C++HVN +LGE A+ L++ +G LL+N+YA+ G W+ ++ ++ E +K
Sbjct: 450 GCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEK 509
Query: 482 SPGCSWI 488
GCS I
Sbjct: 510 EHGCSSI 516
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 272/570 (47%), Gaps = 97/570 (17%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLS-YARQVFDQIPKCKTQF 69
K+ N +KQ+H+++L+T+ H FL L YA VF IP
Sbjct: 23 KSLNHIKQLHAHILRTVIN-----HKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESI 77
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------- 121
++ +R+ + R +IL Y ++ +G F+F +L A ++V +L E
Sbjct: 78 VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVA 137
Query: 122 ---AVICG-----------------------------------------YTKIGLMDDAQ 137
A +C Y + GL+D+A
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAF 197
Query: 138 RLFDSMAERNVIS---------------------------------------WSAMVAGY 158
+LF+ M + NV+ +A+V Y
Sbjct: 198 KLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY 257
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
A G M A+EF+ +M+ +N AM++GY KCG + +A+ +FD+ + D CW M
Sbjct: 258 AGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
YV++ Y + A+ +++ M ++ V+M ISAC LG ++ A + + +
Sbjct: 318 AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLES 377
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
++NALI+M++KCG LD F ++ ++V+S+SSMI A + HG++ +AL +F +M+
Sbjct: 378 ELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMK 437
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
E +EPN+VTF+GVL CSH GLVE+G K F MT + I P EH CMVDL GR+ L
Sbjct: 438 QENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLL 497
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
+A +I + WG+L+ AC++H ELG+ AA+ +LEL P+ G L++NIY
Sbjct: 498 REALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIY 557
Query: 459 ASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A +W+D ++ ++ E K G S I
Sbjct: 558 AREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 255/449 (56%), Gaps = 22/449 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD+IP + W ++ ++ +H ++ L+ +M + +++++++A
Sbjct: 248 ARELFDRIPD-RNVAAWNVMLSGYLRLSHMEEAYKLFTEMPD----KNSISWTTMISALV 302
Query: 115 RVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
R L EA ++ GY + ++DDA+ +FD + R+ + W+ M++G
Sbjct: 303 RGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISG 362
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
Y +CG + A + +M K+ V+W MIAGY G++R+A +F ++++ + W ++
Sbjct: 363 YVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVI 422
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
+VQNG A++ + +MR++ R +SAC L + + +
Sbjct: 423 SGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGYI 482
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
++ NALI ++KCG + A + F + D++S++++I +A +G EA+ +F +M
Sbjct: 483 GDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREM 542
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ + P++VTF+GVL+ACSH GL+++G F MT+ + ++P+ EH CMVDLLGRSG+
Sbjct: 543 EDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDLLGRSGR 602
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
L +A +I + +AG WGA+LGAC+VH N EL ++AA L EL P KT N LL+NI
Sbjct: 603 LSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNI 662
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCS 486
A GKW +++ +++ I E K+PG +
Sbjct: 663 TAEAGKWDEAQNMRVFIKERGVHKTPGLA 691
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 162/347 (46%), Gaps = 47/347 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR D++P K + ++I + H F ++ L +M +++
Sbjct: 120 LGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIIS---------- 169
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+V+ G T+ G M A + FD M R+++SW+ M+ GY G++ +A +
Sbjct: 170 --------WNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLF 221
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ N V+WV ++ GY + G + EA+++FD I + + + W M Y++ + + A +
Sbjct: 222 AGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYK 281
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVE----------MAA--------ILAKHVD- 272
++ M +N IS M+ A+ +L + + AA + +K +D
Sbjct: 282 LFTEMPDKN-SISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDD 340
Query: 273 -----EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+G R N +I + CG LD A F ++ NKD++S+++MI +A G+
Sbjct: 341 ARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQM 400
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
++A+ +F KM + N V++ V++ GL + + F LM R
Sbjct: 401 RKAVGIFRKMN----QRNTVSWNSVISGFVQNGLCVEALQHFVLMRR 443
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 141/293 (48%), Gaps = 20/293 (6%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A++ + G + DA+RLFD + RN +SW+AM+A ++ G + A++ +D M ++ +
Sbjct: 47 AMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFS 106
Query: 182 WVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W M++ Y + GE+ A+ D + + +C+ AM Y ++G A+ + + M +
Sbjct: 107 WTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPD 166
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+ +VG T+ G++ A K DE R N ++ + + G +D A
Sbjct: 167 IISWNSVLVG----LTRNGEMVRA---VKFFDEMPA-RDMVSWNLMLEGYVRAGDVDSAA 218
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F+ + + +V+S+ +++ + G+ EA ++F ++ + + V G L SH
Sbjct: 219 GLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLR-LSH-- 275
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDF 411
+E+ K F M I T M+ L R G+L++A L+ M + F
Sbjct: 276 -MEEAYKLFTEMPDKNSIS-----WTTMISALVRGGKLQEAKDLLDKMPFDSF 322
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
A G + AA+ +D M +N+V++ AM++ + G + +A+++FDEI + W AM
Sbjct: 22 ARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIA 81
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH-VDEGCCD 277
+G A +++ M + S MV + +LG LA+ +D D
Sbjct: 82 ACSDHGRVADARDLFDAMPARD-GFSWTLMVSCYARAGELG-------LARDALDRMPGD 133
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
+ NA+I ++K G D A + D+IS++S++ +G+ A+ F +M
Sbjct: 134 KCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEM 193
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
Y SN + ++ G L A R F + +++ +SY++M++A A HG+ +A +F +E
Sbjct: 12 YRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLF----DE 67
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
N V++ ++ ACS G V D F+ M G T MV R+G+L
Sbjct: 68 IPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFS-----WTLMVSCYARAGEL 120
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 242/440 (55%), Gaps = 14/440 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A +VF I K K W S+I V +++ L+ KM V S T VL
Sbjct: 181 DLDSACKVFTTI-KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 111 NACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+ACA++ +L +C Y + ++ N+ +AM+ Y CG+++ AK
Sbjct: 240 SACAKIRNLEFGRQVCSYIE-----------ENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA-KA 228
+D M EK++VTW M+ GY + A++V + + + D W A+ Y QNG +A
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
I +++ Q+N++++++ +V +SAC Q+G +E+ + ++ + +V++ALIH
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH 408
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKCG L+ + F+ ++ +DV +S+MI A HG EA+DMF KM+ ++PN VT
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F V ACSH GLV++ F M +GI P +H C+VD+LGRSG LEKA I
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
WGALLGACK+H N L E+A LLEL P G LL+NIYA +GKW++
Sbjct: 529 PIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVS 588
Query: 469 IVKMMISETEKKKSPGCSWI 488
++ + T KK PGCS I
Sbjct: 589 ELRKHMRVTGLKKEPGCSSI 608
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 16/279 (5%)
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMVGAISACT 256
A+KVFDEI +P++ W + Y +I + M E+ ++ I A
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
++ + + L + +V+N+LIH + CG LD A + F+ IK KDV+S++S
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG---CKQFELMT 373
MI F G +AL++F KM +E ++ + VT +GVL+AC+ +E G C E
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE-EN 261
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
RV L M+D+ + G +E A L D + D TW +L + + E
Sbjct: 262 RVNVNLTLA---NAMLDMYTKCGSIEDAKRLF-DAMEEKDNVTWTTMLDGYAISEDYE-- 315
Query: 434 EIAARHLLELGPEK--TGNSALLANIYASMGKWKDSEIV 470
AAR +L P+K +AL++ Y GK ++ IV
Sbjct: 316 --AAREVLNSMPQKDIVAWNALIS-AYEQNGKPNEALIV 351
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 270/534 (50%), Gaps = 59/534 (11%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R + NQ+KQ+H+ +LK H + + Q LI L ++ A VF+QI
Sbjct: 26 RCSSLNQVKQIHAQVLKA--NLHRE-SFVGQKLIAAFSL-CRQMTLAVNVFNQIQDPDV- 80
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA-----RVPSLLEA- 122
L+ +LIR HV ++ + ++ +M GV FT+ +L AC+ RV ++ A
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQ 140
Query: 123 ------------------------------------------------VICGYTKIGLMD 134
+I G K+G +
Sbjct: 141 VEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELG 200
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
+A+RLFD M ER+ +SW+ ++ GY G M AA E +++M +N V+W M+ GY K G+
Sbjct: 201 EARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGD 260
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+ A+ +FD++ + W M Y + G AK AI +Y M + ++ + ++ +SA
Sbjct: 261 MDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSA 320
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C G + + + ++ + VSNALI M++KCG L+ A F + KDV+S+
Sbjct: 321 CAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSW 380
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+++I A HG ++AL +F +M+ EG P++VTF+GVL AC+H G V++G F M R
Sbjct: 381 NAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMER 440
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+G+ P EH CMVDLLGR G+L++A L+ +A WG LLGAC++H L E
Sbjct: 441 DYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAE 500
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L++ +GN ++L+NIYA+ G W + +++ + T +K G S I
Sbjct: 501 EVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSI 554
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 262/463 (56%), Gaps = 33/463 (7%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + AR++FD +P K W ++I + Q++ L+ M V++ +++V
Sbjct: 143 NRIEEARRLFDAMP-VKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVS----WNTV 197
Query: 110 LNACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+ A + + EA ++ G +K G +DDA+ LFD M RNV+SW+
Sbjct: 198 ITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWN 257
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
M+ GYA + A + +++M E+ +W MI G+ + G++ A F ++S +
Sbjct: 258 TMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVT 317
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQ-ENVRISEVAMVGAISACTQLGDV----EMAAIL 267
W A+ +VQ+G ++ A++++ M+ NV+ +E V + AC++L + ++ I+
Sbjct: 318 WTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQII 377
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS--RIKNKDVISYSSMITAFADHG 325
+K V + D V +ALI+M+SKCG L+LA + F I ++DV+S++ MI A+A HG
Sbjct: 378 SKTVYQEVAD----VVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHG 433
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+A+ +F +M+ G P+ VT+I +L+ACSH GLV++G K FE + R IK +H
Sbjct: 434 HGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHF 493
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
TC+VDL GR+G+L++A I + A W ALL C VH + +LG++ A LLE P
Sbjct: 494 TCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEP 553
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E G +L+NIYAS GKW+++ V+M + + KK PGCSWI
Sbjct: 554 ENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWI 596
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 180/398 (45%), Gaps = 81/398 (20%)
Query: 106 FSSVLNACARVPSLLEAV---------------ICGYTKIGLMDDAQRLFDSMAERNVIS 150
SS + C VP + V I K G + +A+++F+ M +R+V+S
Sbjct: 40 LSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVS 99
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTE-KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
W+A++ GY CG ++ AK +DR KN VTW A+++GY + + EA+++FD + +
Sbjct: 100 WTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKN 159
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
W M Y + G+ A+++++ M + NV V+ I+A Q V+ A L
Sbjct: 160 VISWNTMIEGYARKGWIDQALDLFEXMPERNV----VSWNTVITAFMQRRRVDEAQELFN 215
Query: 270 HVDE----------------GCCDRT----------NYVS-NALIHMHSKCGYLDLAWRE 302
+ E G D N VS N +I +++ LD A++
Sbjct: 216 RMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKL 275
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE---------------------- 340
F ++ +++ S+++MIT F +GK + A+D F KM N+
Sbjct: 276 FEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEAL 335
Query: 341 ----------GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
++PN+ TF+ VL ACS + +G + +++++ + + + ++ +++
Sbjct: 336 KIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTV-YQEVADVVSALIN 394
Query: 391 LLGRSGQLEKAHSLIMDYK-DFCDAGTWGALLGACKVH 427
+ + G+LE A + D D +W ++ A H
Sbjct: 395 MYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHH 432
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 252/478 (52%), Gaps = 64/478 (13%)
Query: 52 LSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+ +AR+VFD+IP + + W +++ + Q+ L+ M V+T
Sbjct: 146 IGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVIT--------- 196
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
A++ GY K+ ++ A+R FD M ER+V+SW+AM++GYA G + A
Sbjct: 197 ---------WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRL 247
Query: 171 YDRMT----EKNSVTWVAMIAG-----------------------------------YGK 191
+D M E + TWV +I+ Y K
Sbjct: 248 FDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAK 307
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVG 250
G++ A+K+F+ + + W +M Y QNG + AIE++K M + + EV MV
Sbjct: 308 FGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVS 367
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
ISAC LG +E+ + + + E + NA+I M+S+CG ++ A R F + +D
Sbjct: 368 VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 427
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
V+SY+++I+ FA HG EA+++ M+ GIEP++VTFIGVLTACSH GL+E+G K FE
Sbjct: 428 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 487
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
+ P +H CMVDLLGR G+LE A + AG +G+LL A ++H
Sbjct: 488 SIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 542
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
ELGE+AA L EL P+ +GN LL+NIYAS G+WKD E ++ + + KK+ G SW+
Sbjct: 543 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWV 600
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 207/425 (48%), Gaps = 32/425 (7%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLI----RLLQLPGDNLSYARQVFDQ 61
+ R FN L+Q+H+ ++ H+ Y+ LI RL P Y +F+
Sbjct: 7 IASRVGNFNHLRQLHAQIIHNSLHHHN---YWVALLINHCTRLRAPP----HYTHLLFNS 59
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC-------- 113
F++TS++R + + +L+Y +M GV F + ++ +
Sbjct: 60 TLNPNV-FVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFH 118
Query: 114 ARVPSL--------LEAVICGYTKIGLMDDAQRLFDSMA--ERNVISWSAMVAGYANCGN 163
A V L AVI Y ++G + A+++FD + ER V W+AMV+GY +
Sbjct: 119 AHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWES 178
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
A+ +D M E+N +TW AM+ GY K ++ A++ FD + E W AM Y QN
Sbjct: 179 EGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQN 238
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G A+ A+ ++ M + E V ISAC+ GD +AA L + + + +V
Sbjct: 239 GLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVR 298
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNEGI 342
AL+ M++K G LD A + F+ + ++V++++SMI +A +G+S A+++F +M + +
Sbjct: 299 TALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKL 358
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
P++VT + V++AC H G +E G +T IK M+ + R G +E A
Sbjct: 359 TPDEVTMVSVISACGHLGALELGNWVVRFLTE-NQIKLSISGHNAMIFMYSRCGSMEDAK 417
Query: 403 SLIMD 407
+ +
Sbjct: 418 RVFQE 422
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 281/548 (51%), Gaps = 74/548 (13%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLI-RLLQLPGD--NLSYARQVFDQI 62
L+ S QL+Q+H+ LL + ++ FLI +L+ ++++ARQVFD +
Sbjct: 27 LIDSSTHKAQLRQIHARLLVLGLQ-------FSGFLITKLIHASSSYGDITFARQVFDDL 79
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL--- 119
P+ + F W ++IR + + HF+ ++L+Y+KM V FTF +L AC + L
Sbjct: 80 PRPQV-FPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMG 138
Query: 120 -----------LEA-------VICGYTKIGLMDDAQRLFD--SMAERNVISWSAMVAGYA 159
EA +I Y K + A+ +F+ + ER ++SW+A+V+ YA
Sbjct: 139 RFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 160 NCGNMKAAKEFYDRM----TEKNSVTWVAMIAG--------------------------- 188
G A E + +M + + V V+++
Sbjct: 199 QNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPD 258
Query: 189 --------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
Y KCG+V AK +FD++ P+ W AM Y +NG+AK AI+++ M ++
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKD 318
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
VR +++ AISAC Q+G +E A + ++V ++S+ALI M +KCG ++ A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECAR 378
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F R ++DV+ +S+MI + HG+++EA+ ++ M +G+ PN VTF+G+L AC+H G
Sbjct: 379 SVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSG 438
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
+V +G F M I P +H C++DLLGR+G L++A+ +I WGAL
Sbjct: 439 MVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L ACK H + ELG+ AA+ L + P TG+ L+N+YA+ W V++ + E
Sbjct: 498 LSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 481 KSPGCSWI 488
K GCSW+
Sbjct: 558 KDVGCSWV 565
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 252/442 (57%), Gaps = 27/442 (6%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ +S A ++F+++P K W ++I + + ++ L+ KM V+ S T S+
Sbjct: 144 NKISDAEKLFNEMPN-KNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVV-SWNTVMSM 201
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L C R+ ++A+RLFD M ER+VISW+AM+AG + A +
Sbjct: 202 LAQCGRI-----------------EEARRLFDRMPERDVISWTAMIAGL-----LDEALD 239
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++RM E++ +W MI G + G++R A+K+F+E+ + + W M VQ G ++ A
Sbjct: 240 LFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEA 299
Query: 230 IEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
++++ M N + ++ V + AC+ L + + + + + + +V +ALI+
Sbjct: 300 LKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALIN 359
Query: 289 MHSKCGYLDLAWREFSR--IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
M+SKCG L A + F +D++S++ +I A+A HG +EA++ F +MR G +P+
Sbjct: 360 MYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDD 419
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
VT++G+L+ACSH GLVE+G K F+ + + I +H C+VDL GR+G+L++A I
Sbjct: 420 VTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIE 479
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ A WGALL C VH N ++G+ AA+ LLE+ PE G LL+NIYAS GKW++
Sbjct: 480 RLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWRE 539
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
+ V++ + + KK PGCSWI
Sbjct: 540 AARVRLKMKDKGLKKQPGCSWI 561
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 173/326 (53%), Gaps = 22/326 (6%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM-TEKNSVT 181
+I +K G + +A+RLFD M E +VI+W+ +++GY CG ++ A+ +DR+ +KN VT
Sbjct: 73 MITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVT 132
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W AM+ GY + ++ +A+K+F+E+ + W M Y QNG +A+ +++ M + NV
Sbjct: 133 WTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV 192
Query: 242 -----RISEVAMVGAISACTQLGD-------VEMAAILAKHVDEGC------CDRTNYVS 283
+S +A G I +L D + A++A +DE +R
Sbjct: 193 VSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDLFERMPERDLPSW 252
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNEGI 342
N +I + G L A + F+ + K+VIS+++MIT G+S+EAL +F +M G
Sbjct: 253 NTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGA 312
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
+PNQ TF+ VL ACS+ + +G + +++++ + T ++ ++++ + G+L A
Sbjct: 313 KPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTV-YQDSTFVVSALINMYSKCGELGTAR 371
Query: 403 SLIMD-YKDFCDAGTWGALLGACKVH 427
+ D D +W ++ A H
Sbjct: 372 KMFDDGMTSQRDLVSWNGIIAAYAHH 397
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 261/495 (52%), Gaps = 61/495 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD++ + + WT +I + +S++L+ KM GV+ +V+ ACA
Sbjct: 84 ARFLFDKMQE-RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA 142
Query: 115 RVPSLLEA---------------VICG------YTKIGLMDDAQRLFDSMAERNVISWSA 153
++ ++ +A VI G Y K G ++ A+ +FD M E+NVISWSA
Sbjct: 143 KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSA 202
Query: 154 MVAGYANCGNMKAAKEFY----------DRMT---------------------------- 175
M+A Y G + A + + D++T
Sbjct: 203 MIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFG 262
Query: 176 -EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+ + A++ YGKC E+ +A+ +FD++ E D W M Y + G A ++ ++
Sbjct: 263 LDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFD 322
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
MR+E V +VAMV + AC +LG + A + ++ + A+I MH+KCG
Sbjct: 323 KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 382
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
++ A F R++ K+VIS+S+MI A+ HG+ ++ALD+F M GI PN++T + +L
Sbjct: 383 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 442
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLVE+G + F LM + ++ +H TC+VDLLGR+G+L++A LI D
Sbjct: 443 ACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE 502
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
G WGA LGAC+ H + L E AA LLEL P+ G+ LL+NIYA+ G+W+D + ++
Sbjct: 503 GLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLM 562
Query: 475 SETEKKKSPGCSWIS 489
S+ KK PG +WI
Sbjct: 563 SQRRLKKIPGWTWIE 577
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 133/242 (54%), Gaps = 6/242 (2%)
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
A++ Y KC E+ +A+ +FD++ E D W M Y + G A ++ +++ MR+E V
Sbjct: 70 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 129
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+VAMV + AC +LG + A I+ ++ + A+I M++KCG ++ A F
Sbjct: 130 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 189
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
R++ K+VIS+S+MI A+ HG+ ++ALD+F M + G+ P+++T +L ACS ++
Sbjct: 190 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQ 249
Query: 364 DGCKQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G + + FG+ +H C +VD+ G+ ++E A + D D TW ++
Sbjct: 250 MG-RLIHHIVYKFGLD--LDHFVCAALVDMYGKCREIEDAR-FLFDKMPERDLVTWTVMI 305
Query: 422 GA 423
G
Sbjct: 306 GG 307
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
I AC L +++M ++ V + D ++V AL+ M+ KC ++ A F +++ +D+
Sbjct: 37 IRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDL 96
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG------LVEDG 365
++++ MI +A+ GK+ E+L +F KMR EG+ P++V + V+ AC+ G +++D
Sbjct: 97 VTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDY 156
Query: 366 C--KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
K+F+L + G T M+D+ + G +E A I D + + +W A++ A
Sbjct: 157 IQRKKFQLDV-ILG--------TAMIDMYAKCGCVESARE-IFDRMEEKNVISWSAMIAA 206
Query: 424 CKVHVNAELGEIAARHLLELG--PEKTGNSALL 454
H R +L G P+K ++LL
Sbjct: 207 YGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 253/481 (52%), Gaps = 44/481 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-----SGFTF 106
L AR +FD+ + WT+L+ + ++ L+ +M V++ +T
Sbjct: 82 LHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTS 141
Query: 107 SS-VLNACA-------RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
S V +AC R ++ + G +D A++LFD M ERNV++W+ MVAG
Sbjct: 142 SGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGI 201
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
A G++ A+ +D M E+N V+W AMI+GY + + EA +F ++ D + W M
Sbjct: 202 ARSGSVNEARALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMIT 261
Query: 219 CYVQNGYAKAAIEMYKVMRQENV-------------------------------RISEVA 247
++QN + A E++ M + NV R ++V
Sbjct: 262 GFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVT 321
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+GA+ AC+ L + + + + + ++ + L+++++KCG + LA + F+ K
Sbjct: 322 FLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSK 381
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
KDVIS++ MI A+A HG EA+ ++ KM+ G +PN VT++G+L+ACSH GLV++G +
Sbjct: 382 EKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLR 441
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
FE M + I EH TC++DL R+G+L A LI K + W ALLG C H
Sbjct: 442 IFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSH 501
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N +G++AAR+LLE P G LL NIYAS GKWK++ ++ +++ KK PGCSW
Sbjct: 502 GNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSW 561
Query: 488 I 488
I
Sbjct: 562 I 562
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 162/339 (47%), Gaps = 44/339 (12%)
Query: 122 AVICGYTKIGLMDDAQRLFDSM-AERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
A++ Y G++ DA+ LFD A RNV++W+A+++GYA G + A+ + RM E+N V
Sbjct: 71 ALVAAYACQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFGRMPERNVV 130
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+W M+ Y G V +A +F+ + DA W + V++G A +++ M + N
Sbjct: 131 SWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERN 190
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V ++ MV I+ + + A+ + +G +R NA+I +++ +D A
Sbjct: 191 V-MAWTTMVAGIARSGSVNE-------ARALFDGMPERNVVSWNAMISGYARNHMIDEAH 242
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM--RN------------------- 339
F ++ +D+ S++ MIT F + + A ++F KM RN
Sbjct: 243 DLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSET 302
Query: 340 ----------EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV-FGIKPLTEHLTCM 388
+GI PNQVTF+G + ACS+ + +G + +++ + F E + +
Sbjct: 303 ALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIE--STL 360
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++L + G++ A + K+ D +W ++ A H
Sbjct: 361 MNLYAKCGEIILARKVFNLSKE-KDVISWNGMIAAYAHH 398
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 19/222 (8%)
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS--- 211
VA A G + A+ +DR +++ V+W A++A Y G + +A+ +FD PDA
Sbjct: 42 VAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFD---RPDARRNV 98
Query: 212 -CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W A+ Y + G A ++ M + NV +S M+ A ++ ++GD A
Sbjct: 99 VTWTALLSGYARAGRVDEAEALFGRMPERNV-VSWNTMLEAYTSSGRVGD-------ACT 150
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ G R N L+ + G +D A + F R+ ++V+++++M+ A G EA
Sbjct: 151 LFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEA 210
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+F M E N V++ +++ + ++++ F M
Sbjct: 211 RALFDGMP----ERNVVSWNAMISGYARNHMIDEAHDLFMKM 248
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 265/490 (54%), Gaps = 18/490 (3%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
KT LKQ+H+ +KT Q A +I+ ++ YAR VF Q+P+ F
Sbjct: 30 KTPRDLKQLHAIFIKT---GQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNC-FC 85
Query: 71 WTSLIR--NHVLHAHFR-QSILLYAKMHRLG-VLTSGFTFSSVLNACARVPSLLEA-VIC 125
W +++R H + ++++L++ M G V + FTF SVL ACAR L E I
Sbjct: 86 WNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIH 145
Query: 126 GY-TKIGLMDDAQRLFDSMAERNVISWSAMVAGYA-NCGNM-----KAAKEFYDRMTEKN 178
G K G +D S R + + M Y+ C N+ E R + N
Sbjct: 146 GLIVKFGFHED--EFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGN 203
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
V W MI G + G+++ AK +FDE+ + W M Y QNG+ AI +++ M+
Sbjct: 204 VVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQS 263
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
N+ + V +V + A ++G +E+ + + + + + + +AL+ M+SKCG +D
Sbjct: 264 SNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDE 323
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A + F + ++ I++S++I AFA HG++++A+ F M G+ PN V +IG+L+ACSH
Sbjct: 324 ALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSH 383
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GLVE+G F M +V G++P EH CMVDLLGR+G LE+A LI + D W
Sbjct: 384 AGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWK 443
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALLGACK+H N ++GE A L+EL P +G+ L+N+YAS+G W+ V++ + +
Sbjct: 444 ALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMD 503
Query: 479 KKKSPGCSWI 488
+K PGCSWI
Sbjct: 504 IRKDPGCSWI 513
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 246/450 (54%), Gaps = 20/450 (4%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
L+R+ G ++ AR +FD++ + W+ +I + F ++LL+ +M V
Sbjct: 163 LVRMYAACG-RIAEARLMFDKMFH-RDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVE 220
Query: 101 TSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS----WSAMVA 156
S+VL+AC R +L Y K+ + D + E N++ SA+V
Sbjct: 221 PDEMMLSTVLSACGRAGNL------SYGKM--------IHDFIMENNIVVDPHLQSALVT 266
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
YA+CG+M A +++MT KN V AM+ GY K G++ A+ VF+++ + D CW+AM
Sbjct: 267 MYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAM 326
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y ++ + A+ ++ M+ ++ +V M+ I+AC LG ++ A + VD+
Sbjct: 327 ISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGF 386
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
++NALI M++KCG L+ A R F ++ K+VIS++ MI+AFA HG + AL F +
Sbjct: 387 GGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQ 446
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M +E IEPN +TF+GVL ACSH GLVE+G K F M I P H CMVDL GR+
Sbjct: 447 MEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRAN 506
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L +A L+ + WG+L+ AC+VH ELGE AA+ LLEL P+ G L+N
Sbjct: 507 LLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSN 566
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCS 486
IYA +W+D V+ ++ K GCS
Sbjct: 567 IYAKARRWEDVGQVRKLMKHKGISKERGCS 596
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 207/428 (48%), Gaps = 30/428 (7%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
+ + LKQVH+ +L++ K + +I L +L YA VF+ IPK +T
Sbjct: 33 ATSLTHLKQVHAQILRS--KLDRSTSLLVKLVISSCAL-SSSLDYALSVFNLIPKPETH- 88
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
L +R +++L+Y +M G+ F+F +L A +RV SL+E G
Sbjct: 89 LCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVE----GLEI 144
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
GL A+ FDS + + +V YA CG + A+ +D+M ++ VTW MI GY
Sbjct: 145 HGLA--AKLGFDS----DPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGY 198
Query: 190 GKCGEVREAKKVFDEIS----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS- 244
+ G +A +F+E+ EPD + + + G ++ + + N+ +
Sbjct: 199 CQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDP 258
Query: 245 --EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+ A+V ++C + LA ++ E + S A++ +SK G ++ A
Sbjct: 259 HLQSALVTMYASCGSMD-------LALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSV 311
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F+++ KD++ +S+MI+ +A+ QEAL++F +M++ GI+P+QVT + V+TAC+H G +
Sbjct: 312 FNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGAL 371
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
D K L G ++++ + G LE+A I D + +W ++
Sbjct: 372 -DQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARR-IFDKMPRKNVISWTCMIS 429
Query: 423 ACKVHVNA 430
A +H +A
Sbjct: 430 AFAMHGDA 437
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 241/434 (55%), Gaps = 19/434 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+++D +P K T++I ++ L++ +M V+T
Sbjct: 160 ARKLYDMMP-VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVT------------- 205
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+I GY + +D A++LF+ M E+ +SW++M+ GY G ++ A+EF++ M
Sbjct: 206 -----WTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
K + AMI G+G+ GE+ +A++VFD + + D + W M Y + G+ A++++
Sbjct: 261 PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+++ VR S +++ +S C L ++ + H+ D YV++ L+ M+ KCG
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG 380
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
L A F R +KD+I ++S+I+ +A HG +EAL +F +M + G PN+VT I +LT
Sbjct: 381 ELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACS+ G +E+G + FE M F + P EH +C VD+LGR+GQ++KA LI DA
Sbjct: 441 ACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDA 500
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
WGALLGACK H +L E+AA+ L E P+ G LL++I AS KW D +V+ +
Sbjct: 501 TVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNM 560
Query: 475 SETEKKKSPGCSWI 488
K PGCSWI
Sbjct: 561 RTNNVSKFPGCSWI 574
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 44/313 (14%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I ++IG +++A++ FDS+ + + SW+++V+GY + G K A++ +D M+E+N V+W
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+++GY K + EA+ VF+ + E + W AM Y+Q G A ++ M + N +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN-EV 142
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV-----------SNALIHMHSK 292
S M G + +D+G D+ + S +I +
Sbjct: 143 SWTVMFGGL------------------IDDGRIDKARKLYDMMPVKDVVASTNMIGGLCR 184
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
G +D A F ++ ++V+++++MIT + + + A +F M E +V++ +
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSM 240
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLEKAHSLIMDYKD 410
L + G +ED + FE+M P+ + C M+ G G++ KA + D +
Sbjct: 241 LLGYTLSGRIEDAEEFFEVM-------PMKPVIACNAMIVGFGEVGEISKARR-VFDLME 292
Query: 411 FCDAGTWGALLGA 423
D TW ++ A
Sbjct: 293 DRDNATWRGMIKA 305
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 261/477 (54%), Gaps = 21/477 (4%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN----LSYARQVFDQIPKCKTQFLW 71
LK +H+++L+T H + +A RL+ D+ L YA +V QI + F++
Sbjct: 33 LKIIHAHMLRT----HLFFDVFAAS--RLIAFCIDSTTNLLHYAIRVASQI-QNPNLFIY 85
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
+LIR + S Y K R G+L T ++ ACA++ + +G
Sbjct: 86 NALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLEN---------APMG 136
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
+ Q + E++ +++V YA+ G++ AA+ + RM + V+W MIAGY +
Sbjct: 137 MQTHGQAIKHGF-EQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHR 195
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG+ + A+++FD + E + W+ M Y +N + A+E ++ ++ E V +E MVG
Sbjct: 196 CGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGV 255
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
IS+C LG + M ++V + A++ M+++CG ++ A F ++ KDV
Sbjct: 256 ISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDV 315
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+ ++++I A HG +++AL F +M +G P +TF VLTACSH G+VE G + FE
Sbjct: 316 LCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFES 375
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M R G++P EH CMVDLLGR+G+L KA ++ +A W ALLGAC++H N E
Sbjct: 376 MKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVE 435
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+GE + LLE+ PE +G+ LL+NIYA KWKD +++ M+ + +K PG S I
Sbjct: 436 VGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLI 492
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 246/437 (56%), Gaps = 24/437 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A Q+FD+IP+ T F + ++ +V + +F ++ + +M F ++ N
Sbjct: 112 AHQLFDEIPEPDT-FSYNIMLSCYVRNVNFEKAQSFFDRM--------PFKDAASWNT-- 160
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+I GY + G M+ A+ LF SM E+N +SW+AM++GY CG+++ A F+
Sbjct: 161 --------MITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVA 212
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ V W AMI GY K +V A+ +F +++ + W AM YV+N + ++++
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG--CCDRTNYVSNALIHMHS 291
+ M +E +R + + A+ C++L +++ + + V + C D T S LI M+
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS--LISMYC 330
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG L AW+ F +K KDV+++++MI+ +A HG + +AL +F +M + I P+ +TF+
Sbjct: 331 KCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL AC+H GLV G FE M R + ++P +H TCMVDLLGR+G+LE+A LI
Sbjct: 391 VLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
A +G LLGAC+VH N EL E AA LL+L + LANIYAS +W+D V+
Sbjct: 451 PHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVR 510
Query: 472 MMISETEKKKSPGCSWI 488
+ E+ K PG SWI
Sbjct: 511 KRMKESNVVKVPGYSWI 527
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 157/327 (48%), Gaps = 16/327 (4%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA-NCGNMKAAKEFYDRMTEKN 178
L +I + G +D A R+F M +N I+W++++ G + + M A + +D + E +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPD 123
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
+ ++ M++ Y + +A+ FD + DA+ W M Y + G + A E++ M +
Sbjct: 124 TFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMME 183
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+N EV+ IS + GD+E A+ H + R A+I + K ++L
Sbjct: 184 KN----EVSWNAMISGYIECGDLEKAS----HFFKVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 299 AWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A F + NK+++++++MI+ + ++ + ++ L +F M EGI PN L CS
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--IMDYKDFCDAG 415
++ G + +++++ +T LT ++ + + G+L A L +M KD
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTA-LTSLISMYCKCGELGDAWKLFEVMKKKDVV--- 351
Query: 416 TWGALLGACKVHVNAELGEIAARHLLE 442
W A++ H NA+ R +++
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMID 378
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 271/487 (55%), Gaps = 20/487 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--DNLSYARQVFDQIP 63
++ + K+ +L+Q+H+ ++KT H + LI L G L YA VF +I
Sbjct: 12 VLDKCKSLCELRQIHAQMIKTNLLNH---QFTVSRLIAFCSLSGVSGGLDYASSVFSRI- 67
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS--SVLNACARVPSLLE 121
+ F++ +LI+ ++ +S++LYA+M +SG FS SVL AC ++ + E
Sbjct: 68 QHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDE 127
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
G G + FD ++MV Y + G ++ A+ +DRM ++ V+
Sbjct: 128 ----GRQVHGQVLKTHLWFDPFVG------NSMVRMYIDFGEIELARRVFDRMPNRDVVS 177
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +MIAGY K GE+ AKKVF+ +S+ D W +M YVQN A+++++ M +
Sbjct: 178 WNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGL 237
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD-RTNYVSNALIHMHSKCGYLDLAW 300
R A+V +SA LG VE L +V + + ++ +ALI M+SKCGY++ A+
Sbjct: 238 RPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAY 297
Query: 301 REFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F I ++ ++ ++SMI+ A HG ++EALD+F++M IEPN++TF+G+L+ CSHG
Sbjct: 298 HVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHG 357
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLVE+G FE M + I P +H CM+DL GR+G+LE A +I + D W A
Sbjct: 358 GLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKA 417
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
+L A H + E+G+ AA +EL P+ + + LL+NIYA G+W D +++M+ +
Sbjct: 418 ILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGV 477
Query: 480 KKSPGCS 486
KK GCS
Sbjct: 478 KKIAGCS 484
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 271/489 (55%), Gaps = 40/489 (8%)
Query: 15 QLKQVHSYLLK--------TLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
+LK++H++++K +TK D ++Y + YA +F +
Sbjct: 29 ELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGE------------TEYANLLFKGVAD-P 75
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-------VLTSGFTFSSVLNACARVPSL 119
FL+ ++IR + + + +I +Y +M LG + FTF V+ +CA
Sbjct: 76 NAFLYNAMIRAYKHNKVYVLAITVYKQM--LGNPHGENPIFPDKFTFPFVVKSCA----- 128
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
++C +G +F + N + +++V Y C ++ A ++ MTE+++
Sbjct: 129 --GLMC--YDLGKQVHGH-VFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDA 183
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
V+W +I+G+ + G++R A+ +F+E+ + W A+ Y + G A+E ++ M+
Sbjct: 184 VSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMV 243
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ E+++V + C QLG +E+ + + D+ R V NALI M++KCG +D
Sbjct: 244 GIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQG 303
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
R F ++K +DVIS+S+MI A+HG+++EA+++F +M+ IEP+ +TF+G+LTAC+H
Sbjct: 304 RRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHA 363
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GL+ +G + FE M R + I+P EH C+V+LLG SG+L++A L+ D+ WG+
Sbjct: 364 GLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGS 423
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL +C+ H N ++ IA HLLEL P TGN LL+N+YA +GKW ++ ++
Sbjct: 424 LLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSM 483
Query: 480 KKSPGCSWI 488
KK+PGCS I
Sbjct: 484 KKTPGCSSI 492
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 264/490 (53%), Gaps = 18/490 (3%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
KT LKQ+H+ +KT Q A +I+ ++ YAR VF Q+P+ F
Sbjct: 30 KTPRDLKQLHAIFIKT---GQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNC-FC 85
Query: 71 WTSLIR--NHVLHAHFR-QSILLYAKMHRLG-VLTSGFTFSSVLNACARVPSLLEA-VIC 125
W +++R H + ++++L++ M G V + FTF SVL ACAR L E I
Sbjct: 86 WNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIH 145
Query: 126 GY-TKIGLMDDAQRLFDSMAERNVISWSAMVAGYA-NCGNM-----KAAKEFYDRMTEKN 178
G K G +D S R + + M Y+ C N+ E R + N
Sbjct: 146 GLIVKFGFHED--EFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGN 203
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
V W MI G + G+++ AK +FDE+ W M Y QNG+ AI +++ M+
Sbjct: 204 VVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQS 263
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
N+ + V +V + A ++G +E+ + + + + + + +AL+ M+SKCG +D
Sbjct: 264 SNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDK 323
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A + F + ++ I++S++I AFA HG++++A+ F M G+ PN V +IG+L+ACSH
Sbjct: 324 ALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSH 383
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GLVE+G F M +V G++P EH CMVDLLGR+G LE+A LI + D W
Sbjct: 384 AGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWK 443
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALLGACK+H N ++GE A L+EL P +G+ L+N+YAS+G W+ V++ + +
Sbjct: 444 ALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMD 503
Query: 479 KKKSPGCSWI 488
+K PGCSWI
Sbjct: 504 IRKDPGCSWI 513
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 257/500 (51%), Gaps = 26/500 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
K+ LK++H+ L+ T + + A + + N+ YA VF I +
Sbjct: 38 KSTEDLKKIHAQLIIT---GQIKDTFIATKTVESYAVSARNIDYAFWVFVGI-NYPDSYS 93
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------- 121
WT++IR V + +++ Y M + GV + FTF VL A PS E
Sbjct: 94 WTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLV 153
Query: 122 ------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
A+I Y K G + DA LFD M NV++W+ M+ G CG+ + A+
Sbjct: 154 KVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARR 213
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ M E+N +W A++ GY K G V A+ +FD + E D W +M YVQNG A A
Sbjct: 214 LFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEA 273
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+E++K M V + + +SAC Q+G ++M + ++ ++ AL+ M
Sbjct: 274 LELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDM 333
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG +D A+ F+ + K++ S+++M++ A HG AL++F +M + G+ PN +TF
Sbjct: 334 YAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITF 393
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ VL+ACSH G VE+G K+F M + F I P EH CMVD+L R G + +A +I
Sbjct: 394 VAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMP 453
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+ WGALL ACKVH +GE ++ +L E G LL+NI+A+ +W + E
Sbjct: 454 LEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEK 513
Query: 470 V-KMMISETEKKKSPGCSWI 488
KMM +KK PG S I
Sbjct: 514 TRKMMKQMGVEKKIPGYSSI 533
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 272/543 (50%), Gaps = 63/543 (11%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
++ + KT L+QVH++LLKT + D A L LP D + YA +F+ I K
Sbjct: 27 ILQQCKTPKDLQQVHAHLLKT-RRLLDPIITEAVLESAALLLP-DTIDYALSIFNHIDKP 84
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--- 122
++ + +IR ++LL+ KMH V FTFSSVL AC+R+ +L E
Sbjct: 85 ESS-AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQV 143
Query: 123 ------------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
+I Y G + A+ +FD M ER++++W++M++GY G
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203
Query: 165 KAAKEFYDRMTE---------------------------------------KNSVTWVAM 185
+ + ++ E +N+ ++
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSL 263
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I Y KCG+V A+K+FDE+ + D W+AM Y Q K A+ ++ M++ NV +E
Sbjct: 264 IDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNE 323
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
V MV + +C LG E + ++ + T + LI ++KCGY+D + F
Sbjct: 324 VTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKE 383
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ K+V +++++I A++G+ + AL+ F M ++PN VTFIGVL+ACSH LV+ G
Sbjct: 384 MSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQG 443
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
F M R F I+P EH CMVD+LGR+G LE+A+ I + +A W LL +C+
Sbjct: 444 RHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCR 503
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
H N E+ E + H+ L P +G+ LL+N YA +G+ +D+ V+ +I E E KK PGC
Sbjct: 504 AHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGC 563
Query: 486 SWI 488
S I
Sbjct: 564 SLI 566
>gi|297805312|ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316376|gb|EFH46799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 259/485 (53%), Gaps = 55/485 (11%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-FTFSSVLNACA-- 114
VF+++P T +LW LI+ + F +++ L +M R G +TF V+ C+
Sbjct: 62 VFERVPYPGT-YLWNHLIKGYSNKFLFFETVSLLMRMMRTGFARPDEYTFPLVMKVCSNN 120
Query: 115 ---RVPSLLE-----------------------------------------------AVI 124
RV S + A+I
Sbjct: 121 AEFRVGSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVFGEMPERNVVSWTALI 180
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
Y K G +++A+R+FD M ERN+ +W+A+V G G++ A++ +D M +++ +++ +
Sbjct: 181 VAYVKSGELEEAKRMFDLMPERNLGTWNALVDGLVKSGDLVNARKLFDEMPKRDIISYTS 240
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
MI GY K G++ A+ +F+ D W+A+ + Y QNG A +++ M +NV+
Sbjct: 241 MIDGYAKGGDMVSARDLFENARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 300
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCD-RTNYVSNALIHMHSKCGYLDLAWREF 303
E MVG +SAC+Q+G E+ + ++ + ++YV ALI M++KCG++D A + F
Sbjct: 301 EFIMVGLMSACSQMGCFELCEKVDSYLHQSMNKFSSHYVIPALIDMNAKCGHMDRAAKLF 360
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ +D++SY SM+ A HG EA+ +F KM +EGI P++V F +L CS LVE
Sbjct: 361 EEMPQRDLVSYCSMMEGMAIHGCGSEAVRLFEKMVDEGIVPDEVAFTVILKVCSQSRLVE 420
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G + FELM + + I +H +C+V+LL R+G+L++A+ LI A WG+LLG
Sbjct: 421 EGLRYFELMRKEYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGG 480
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C +H N E+ E+ AR L EL P+ G+ LL+NIYA++ +W D ++ ++E KK
Sbjct: 481 CSLHGNTEIAEVVARQLFELEPQSAGSYVLLSNIYAALDRWADLAHLRDKMNENGIKKIC 540
Query: 484 GCSWI 488
G SWI
Sbjct: 541 GRSWI 545
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 243/438 (55%), Gaps = 23/438 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++YARQ+FDQIP LW S+ R + +R+ ++ +M V+ ++S++N
Sbjct: 1 MTYARQLFDQIPDPNIA-LWNSMFRGYAQSESYRE---IFCEMFERNVVA----WTSMIN 52
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
GY + A+RLFD ER+V+ W+ MV+GY G+M A++ +
Sbjct: 53 --------------GYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLF 98
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
M ++ + W ++ GY G V + +F+E+ E + W A+ Y NG +
Sbjct: 99 HEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLG 158
Query: 232 MYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+K M E +V ++ +V +SAC +LG +++ + + + YV NAL+ M+
Sbjct: 159 SFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMY 218
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG ++ A F + KD+IS++++I A H + +AL++F +M+N G +P+ +TFI
Sbjct: 219 AKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFI 278
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
G+L AC+H GLVEDG F+ M + I P EH CMVD+L R+G+LE+A + +
Sbjct: 279 GILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPV 338
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D W LLGAC+++ N EL E+A + L+EL P+ N +L+NIY G+W+D +
Sbjct: 339 EADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARL 398
Query: 471 KMMISETEKKKSPGCSWI 488
K+ + +T KK PGCS I
Sbjct: 399 KVAMRDTGFKKLPGCSLI 416
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 249/455 (54%), Gaps = 13/455 (2%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPK--CKTQFLWTSLIRNHVLHAHFRQSILLYAK 93
+ A L+ + GD + AR + D P T +W +LI H FR S +
Sbjct: 55 HVASSLVLMYAARGDG-AVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVD 113
Query: 94 MHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
M R GV+ + T+ +VL+AC + Y +G M + + S ++ +A
Sbjct: 114 MVRTGVVPTPVTYITVLSACGKDK---------YIWLG-MQVHKCVVASGVLPDLKVGNA 163
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
++ YA C M AA E ++ M +N+V+W ++I+G+ + G+V +A+ +FD + E D W
Sbjct: 164 LIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSW 223
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
AM YVQ G + A+EM++ M+ VR E MV ++AC QLG +E ++
Sbjct: 224 TAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSR 283
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+V NAL+ M+SKCG + A F + +D +++++I A +G +EA++M
Sbjct: 284 HGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINM 343
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F +M P++VTFIGVLTAC+H GLV+ G F MT +GI P H C++DLLG
Sbjct: 344 FYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLG 403
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R+G+L++A I + ++ WG LL AC+VH N+E+G++AA HLLEL E L
Sbjct: 404 RAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYIL 463
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+N+YA +W+D ++ +I E KK PGCS I
Sbjct: 464 LSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLI 498
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 254/499 (50%), Gaps = 61/499 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L ARQVFD++PK + W ++I + + +++ L+++M G+ + T SV+
Sbjct: 170 SLENARQVFDRMPK-RDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVM 228
Query: 111 NACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
CA + +L + ++ Y K G ++ A +LF+ M R+V
Sbjct: 229 PVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVA 288
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMT---------------------------------- 175
SW+A++ GY+ A F++RM
Sbjct: 289 SWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYA 348
Query: 176 -----EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
E N V A++ Y KCG V A K+F+ + + + W A+ Y Q+G+ A+
Sbjct: 349 IRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEAL 408
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++ M+ + ++ A+V + AC +E + + + V L+ ++
Sbjct: 409 ALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIY 468
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG ++ A + F R+ +DV+S+++MI A+ HG ++AL +F KM+ G + + + F
Sbjct: 469 AKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFT 528
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
+LTACSH GLV+ G + F+ M +G+ P EH C+VDLLGR+G L++A+ +I +
Sbjct: 529 AILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSL 588
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
DA WGALLGAC++H N ELGE AA+HL EL P+ G LL+NIYA +W+D +
Sbjct: 589 EPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKL 648
Query: 471 KMMISETEKKKSPGCSWIS 489
+ M+ E KK PGCS ++
Sbjct: 649 RKMMKEKGVKKQPGCSVVA 667
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 165/371 (44%), Gaps = 47/371 (12%)
Query: 59 FDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
F Q +W I +V + + +++ LY +M R G+ F SV+ AC
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
L K+ D R F+S +VI +A+ + Y CG+++ A++ +DRM +++
Sbjct: 136 LQAG-----RKVH-EDIIARGFES----DVIVGTALASMYTKCGSLENARQVFDRMPKRD 185
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
V+W A+IAGY + G+ EA +F E M+
Sbjct: 186 VVSWNAIIAGYSQNGQPYEALALFSE-------------------------------MQV 214
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
++ + +V + C L +E + + + V N L++M++KCG ++
Sbjct: 215 NGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNT 274
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A + F R+ +DV S++++I ++ + + EAL F +M+ GI+PN +T + VL AC+H
Sbjct: 275 AHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAH 334
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGT 416
+E G +Q G + +V++ + G + A+ L M K+
Sbjct: 335 LFALEQG-QQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVV---A 390
Query: 417 WGALLGACKVH 427
W A++ H
Sbjct: 391 WNAIISGYSQH 401
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 21/230 (9%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
Q +Q+H Y +++ + +D L+ + G N++ A ++F+++PK K W ++
Sbjct: 340 QGQQIHGYAIRSGFESND---VVGNALVNMYAKCG-NVNSAYKLFERMPK-KNVVAWNAI 394
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-VICGYTKIGLM 133
I + H H +++ L+ +M G+ F SVL ACA +L + I GYT
Sbjct: 395 ISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYT----- 449
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
S E NV+ + +V YA CGN+ A++ ++RM E++ V+W MI YG G
Sbjct: 450 ------IRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHG 503
Query: 194 EVREAKKVFDEISEP----DASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+A +F ++ E D + A+ G ++ ++ M+ +
Sbjct: 504 HGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSD 553
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 242/437 (55%), Gaps = 15/437 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L Y+ +F + + + F WT++I H L Q++ YA+M GV + FTFSS+L
Sbjct: 25 LDYSVALFGRT-QNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK 83
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
C P +A+ K+G FDS ++ + ++ YA G++ +A++ +
Sbjct: 84 LCPIEPG--KALHSQAVKLG--------FDS----DLYVRTGLLDVYARGGDVVSAQQLF 129
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D M EK+ V+ AM+ Y K GE+ A+ +FD + E D CW M Y QNG A+
Sbjct: 130 DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALV 189
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M + + +EV ++ +SAC QLG +E + +++ +V AL+ M+S
Sbjct: 190 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 249
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG L+ A F +I +KDV++++SMI +A G SQEAL +F M G+ P +TFIG
Sbjct: 250 KCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIG 309
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+L+AC H G V +G F M +GI+P EH CMV+LLGR+G +E+A+ L+ +
Sbjct: 310 ILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE 369
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D WG LLGAC++H LGE L++ +G LL+NIYA++G W ++
Sbjct: 370 PDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLR 429
Query: 472 MMISETEKKKSPGCSWI 488
M+ ++ KK PGCS I
Sbjct: 430 TMMKDSGVKKEPGCSSI 446
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++ G LD + F R +N V ++++I A G ++AL+ + +M +G+EPN TF
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+L C +E G K G T ++D+ R G + A L
Sbjct: 79 SSILKLCP----IEPG-KALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 255/443 (57%), Gaps = 22/443 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQVFD+ K WT++I + H +++ ++ M V + T +V++
Sbjct: 308 LKNARQVFDESSD-KDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVS 366
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS----WSAMVAGYANCGNMKAA 167
AC + +G ++ +R+ + + E+N+ +A++ Y C + A
Sbjct: 367 AC--------------SDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDA 412
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+E +DRM K+ +W +M+ GY KCG++ A++ FD+ +A CW+AM Y QN K
Sbjct: 413 RELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPK 472
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG-CCDRTNYVSNAL 286
+++++ M + V E +V +SAC QL + + + ++ G + + NA+
Sbjct: 473 ESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAI 532
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M++KCG +D A FS + +++IS+++MI +A +G++++A+++F +MRN G EPN
Sbjct: 533 VDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNN 592
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TF+ +LTACSHGGL+ +G + F+ M R +GIKP H CMVDLLGR+G LE+A+ LI
Sbjct: 593 ITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIA 652
Query: 407 DYK-DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+ C+A WGALL AC++H N EL ++A +LL L PE +G LLAN A+ KW
Sbjct: 653 NMPMQPCEAA-WGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWS 711
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D V+ ++ + KK PG S I
Sbjct: 712 DVRRVRSLMKDKGVKKIPGYSLI 734
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 166/389 (42%), Gaps = 86/389 (22%)
Query: 85 RQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA 144
RQ + A+M G++T F S V+ CA S G + A +F+ +
Sbjct: 171 RQLKQIQARMTLTGIITHAFPVSRVIAFCALAHS------------GDLHYAHTIFNRVE 218
Query: 145 ERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV----------------- 183
+ N W+ M+ GY N A F+ M E +S ++V
Sbjct: 219 QPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGES 278
Query: 184 ------------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
+I Y + G ++ A++VFDE S+ D W M Y +
Sbjct: 279 VYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDC 338
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
++ A+E++++M +V +EV ++ +SAC+ +G++EM + + V+E + + NA
Sbjct: 339 SEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNA 398
Query: 286 LIHM-------------------------------HSKCGYLDLAWREFSRIKNKDVISY 314
L+ M ++KCG L+ A R F + K+ + +
Sbjct: 399 LLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCW 458
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE--DGCKQFELM 372
S+MI ++ + K +E+L +F +M G+ P + T + VL+AC + D Q+ ++
Sbjct: 459 SAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVV 518
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
++ + E+ +VD+ + G ++ A
Sbjct: 519 GKIIPLSVTLEN--AIVDMYAKCGSIDAA 545
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 17/330 (5%)
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW------VAMIAGYGKCGEVREAKK 200
NVI + + +C M+ K+ RMT +T V G++ A
Sbjct: 153 NVIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHT 212
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
+F+ + +P+ W M Y A + M Q V + + V A+ AC Q
Sbjct: 213 IFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFET 272
Query: 261 VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
V + V + D V N LIH +++ G L A + F +KDV+++++MI
Sbjct: 273 VFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDG 332
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
+A H S+EA+++F M +EPN+VT I V++ACS G +E G + E +
Sbjct: 333 YAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCS 392
Query: 381 LTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI-AARH 439
L+ H ++D+ + L A L D D +W ++ V+ A+ G++ +AR
Sbjct: 393 LSLH-NALLDMYVKCDCLVDARELF-DRMATKDVYSWTSM-----VNGYAKCGDLESARR 445
Query: 440 LLELGPEKTGN--SALLANIYASMGKWKDS 467
+ P K SA++A Y+ K K+S
Sbjct: 446 FFDQTPRKNAVCWSAMIAG-YSQNNKPKES 474
>gi|108862694|gb|ABA98288.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 572
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/478 (33%), Positives = 253/478 (52%), Gaps = 42/478 (8%)
Query: 37 YAQFLIRLLQLPG----------DNLSYARQVFDQIPKCKTQ-FLWTSLIRNHVLHAHFR 85
+A LIR L LP + +AR VFD +P +LWT+ I + HA
Sbjct: 31 HAHLLIRGLPLPARAAVALVASSSSPRHARAVFDSVPAASANVYLWTATISAYARHASSS 90
Query: 86 ---------QSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------------- 121
+++ L+A M G + FT +SV+ C++V ++ E
Sbjct: 91 SSHALEVAGEAVALFALMLWSGPRPNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGLGC 150
Query: 122 -------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
A++ Y IGL+ DA+R+FD M +NV+ + MVA G+M AA+E +D M
Sbjct: 151 SSVHVGAALLDLYGNIGLVGDARRVFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGM 210
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E++ ++W +++GY G+ +++FDE++ + + W M + G ++++
Sbjct: 211 AERDPISWNTLMSGYLHLGDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFN 270
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
MR M +SAC QLG + +A + + + C + +V N+LI M++KCG
Sbjct: 271 RMRATGFEPDAATMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCG 330
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A F+ KD +SY+ MI AFA HG +++ALD+F M + G++P+ VTF+GVL+
Sbjct: 331 CISQAQFLFTETYPKDTVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLS 390
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC+H GLVE G FELM + ++ +H C+VDL GR+G +E+AH + A
Sbjct: 391 ACAHAGLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHA 450
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
G WGALL AC+ H + ++GEIAA+ L+ + P+ GN LL N A +W E V++
Sbjct: 451 GVWGALLNACRKHCHVDVGEIAAKELIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQL 508
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 267/480 (55%), Gaps = 27/480 (5%)
Query: 14 NQLKQVHSYLLKTLTKPHDQYHYYAQFLI-RLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
NQLKQ+H+Y L+ + +FLI +LLQLP +L YA +FDQIPK + +L+
Sbjct: 2 NQLKQIHAYSLRNGLD-------HTKFLIEKLLQLP--DLPYACTLFDQIPK-PSVYLYN 51
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI--CGYTKI 130
I+ H + LLY +M G + ++F+ + ACA + ++ + + K
Sbjct: 52 KFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKS 111
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G D + + +A++ YA G +++A++ +D M ++ TW ++IAGY
Sbjct: 112 GFASD------------MFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYA 159
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMV 249
+ G + A ++F+++ + W A+ Y QNG A+EM+ + E + +EV++
Sbjct: 160 RSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIA 219
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+ AC+QLG +++ + + + YVSNA++ +H++CG ++ A + F I +K
Sbjct: 220 SVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSK 279
Query: 310 -DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
++ S+++MI A HG+ +AL ++ +M + P+ VTF+G+L AC+HGG+V +G +
Sbjct: 280 RNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQL 339
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
FE M F + P EH C+VDLLGR+G+L++A++LI + D+ WG LLGAC H
Sbjct: 340 FESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHG 399
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N ELGE+AA L +L P GN +L+NIYA G W ++ M+ K G S+I
Sbjct: 400 NVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYI 459
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 242/439 (55%), Gaps = 19/439 (4%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + A Q F +P+ T W ++I V + ++ L+ +M R V++
Sbjct: 123 ERIDEAWQYFQAMPQRNTA-SWNAMISGLVRYDRVEEASRLFEEMPRRNVIS-------- 173
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
A++ GY KIG ++ A+ LF+ M ++NV+SW+ M++GY G A+
Sbjct: 174 ----------YTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAEN 223
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+++M +KN V AMI GY K G+ +AK +FD+I D + W AM Y QNG + A
Sbjct: 224 LFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEA 283
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++++ M + ++ ++ ++AC+ L ++ V + + + NALI M
Sbjct: 284 LKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITM 343
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG + + F +I + DV+S+++MI AFA HG AL F +MR+ +EP+ +TF
Sbjct: 344 YCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITF 403
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ +L+AC H G V + F M + I P EH C+VD+L R GQ+EKA+ +I +
Sbjct: 404 LSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMP 463
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D G WGALL AC VH+N +LGE+AA+ ++EL P+ +G +L+NIYA+ G W +
Sbjct: 464 FEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTR 523
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ ++ E KK P SW+
Sbjct: 524 VRGLMREQGVKKQPAYSWM 542
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 155/306 (50%), Gaps = 10/306 (3%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I GY K G D+++RLF M +NV+SW++M+AG + A +++ M ++N+ +
Sbjct: 83 SIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTAS 142
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W AMI+G + V EA ++F+E+ + + AM Y + G + A ++ M Q+NV
Sbjct: 143 WNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNV 202
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
V+ IS + G + A L + + D+ A+I + K G D A
Sbjct: 203 ----VSWTVMISGYVENGKFDEAENLFEQMP----DKNIVAMTAMITGYCKEGKTDKAKI 254
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F +I +D+ S+++MIT +A +G +EAL + +M G++P+ T I VLTACS
Sbjct: 255 LFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLAS 314
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+++G K L+ + G + ++ + + G + + L D D +W A++
Sbjct: 315 LQEGRKTHVLVLKS-GYESRISICNALITMYCKCGSILDSE-LAFRQIDHPDVVSWNAMI 372
Query: 422 GACKVH 427
A H
Sbjct: 373 AAFARH 378
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 264/473 (55%), Gaps = 15/473 (3%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H ++LK K D+ + L+ L+ + YAR VFD++ + + W+++IR
Sbjct: 144 KEIHGFVLK---KGLDRDVFVGNALM-LMYGECACVEYARLVFDKMME-RDVVSWSTMIR 198
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ + F ++ L +M+ + V S S++N A ++ ++G A
Sbjct: 199 SLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANM---------RMGKAMHA 249
Query: 137 QRLFDSMAER-NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
+ +S E V + +A++ YA CG++ A++ ++ +T+K V+W AMIAG + +
Sbjct: 250 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 309
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
EA+ +FD D W AM Y Q A ++ MR VR ++V +V +S C
Sbjct: 310 EEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLC 369
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
G +++ + ++D+ + ++ AL+ M++KCG ++ A R F ++D+ ++
Sbjct: 370 AVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWN 429
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
++IT FA HG +EALD+F +M +G++PN +TFIG+L ACSH GLV +G K FE M
Sbjct: 430 AIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT 489
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
FG+ P EH CMVDLLGR+G L++AH +I + WGAL+ AC++H N +LGE+
Sbjct: 490 FGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGEL 549
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA LLE+ PE G + L++NIYA+ +W D+ V+ + KK PG S I
Sbjct: 550 AATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 602
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 94/217 (43%), Gaps = 10/217 (4%)
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W + Y + + A+ +Y +R+ + + + AC Q+ ++ + V
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ DR +V NAL+ M+ +C ++ A F ++ +DV+S+S+MI + + + + AL+
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL-----TC 387
+ +M + P++V + ++ + + G + R EH+ T
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIR----NSNNEHMGVPTTTA 267
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
++D+ + G L A L +W A++ C
Sbjct: 268 LLDMYAKCGHLGLARQLFNGLTQKT-VVSWTAMIAGC 303
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 246/437 (56%), Gaps = 19/437 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ ARQ+FD+IP+ F +I+L +H V ++ F +
Sbjct: 53 IKVARQLFDRIPEPDI----------------FSYNIMLACYLHNADVESARLFFDQM-- 94
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+ + +I G+++ G+MD A+ LF M RN +SW+AM++GY G++ AK+ +
Sbjct: 95 -PVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLF 153
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ ++ V W AMI G+ K G++ A+K F+E+ + W AM Y++N A+ ++
Sbjct: 154 EVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLK 213
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++K M + R + ++ + C+ L +++ + + + + +L+ M+
Sbjct: 214 LFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYC 273
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG L+ AW+ F + KDV+++++MI+ +A HG ++AL +F KMR+EG++P+ +TF+
Sbjct: 274 KCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVA 333
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+AC+H G V+ G + F M R +G++ +H TC+VDLLGR G+L +A LI
Sbjct: 334 VLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFK 393
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
+ +G LLGAC++H N EL E AA++LL L PE LAN+YA+M +W +V+
Sbjct: 394 PHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVR 453
Query: 472 MMISETEKKKSPGCSWI 488
+ + + K+PG SWI
Sbjct: 454 RSMKDNKVIKTPGYSWI 470
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 159/315 (50%), Gaps = 21/315 (6%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-CGNMKAAKEFYDRMTEKNSVT 181
VI + + G ++ A R+F+SM + ++W++M+AGY+N G +K A++ +DR+ E + +
Sbjct: 11 VITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDIFS 70
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
+ M+A Y +V A+ FD++ D + W M + QNG A E++ VM N
Sbjct: 71 YNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRN- 129
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
V+ IS + GD++ LAK + E R+ A+I K G ++LA +
Sbjct: 130 ---SVSWNAMISGYVESGDLD----LAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEK 182
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F + K+++++++MI + ++ +++ L +F +M G PN + VL CS+
Sbjct: 183 YFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSA 242
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG---RSGQLEKAHS--LIMDYKDFCDAGT 416
++ G + +L+ + P++ ++T LL + G LE A L+M KD T
Sbjct: 243 LKLGKQVHQLICK----SPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVV---T 295
Query: 417 WGALLGACKVHVNAE 431
W A++ H E
Sbjct: 296 WNAMISGYAQHGAGE 310
>gi|357131531|ref|XP_003567390.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Brachypodium distachyon]
Length = 531
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 211/369 (57%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
+++C + ++ + A+ LF SM R +SW+AMV Y N G+ +A+ +D M ++S
Sbjct: 151 FNSLLCAHARLASVPAAESLFTSMPSRTQVSWNAMVVVYVNAGDFASARLVFDEMPTRDS 210
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W +I GY K G ++ A+++FD++ + W AM Y Q G K +I +++ +
Sbjct: 211 SSWSVLIVGYCKRGSMQSARELFDKMPGKNLVTWTAMINGYAQCGRPKESISLFRELEAV 270
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ MVG IS+ +Q+G +A + +VD +R V AL+ MH+KCG ++ A
Sbjct: 271 GIEPDAATMVGVISSASQIGSTALAGWVGNYVDRKRIERNEKVLTALVDMHAKCGNVEQA 330
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F I+ D Y+++I+ A HG S AL +F +MR + + P+ +TF+GVLTACSH
Sbjct: 331 LNCFREIEQPDAYPYTALISGLATHGHSTLALQVFERMRAQAVRPDPITFVGVLTACSHA 390
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV+ G +E M + +G+ +H C+VD+LGR+G++ +A ++ G GA
Sbjct: 391 GLVDMGLDYWEAMVQDYGMDRRADHYACVVDMLGRAGRIVEAFDMVQTMPMGPHPGALGA 450
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL ACK H N E+ EI A L EL P TGN LL+NIYA +W+++E ++ ++
Sbjct: 451 LLSACKTHDNVEIAEIVANKLFELEPRNTGNYILLSNIYAGKEQWEEAERIRSLMRTKLP 510
Query: 480 KKSPGCSWI 488
K PG +W+
Sbjct: 511 FKQPGSTWV 519
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 246/489 (50%), Gaps = 49/489 (10%)
Query: 30 PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSIL 89
PH + L L + +L AR++FD+ + W S+I + H +
Sbjct: 42 PHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASA 101
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+A + V T A++ G ++G DDA RLF M +RNV+
Sbjct: 102 YFAGAPKRNVAT------------------WNAMLAGLLRLGRADDADRLFGEMPKRNVV 143
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG------------------- 190
S++ MV G A G + A+E +D M ++N V+W AMI+GY
Sbjct: 144 SYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVEATKLFEAMPEKN 203
Query: 191 ------------KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
K G+V A+++FD I D W M YV NG+ + A+ ++ VM +
Sbjct: 204 VVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFR 263
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
E V+ ++ ++AC+ L + + + SNAL+ M+SKCG +
Sbjct: 264 EGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGE 323
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
+ F ++ KD++S++++I A+A HGK Q+ + +F +M G+ P+ +TF+ VL+AC H
Sbjct: 324 SELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEMEMTGLIPDDITFLSVLSACGH 383
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
G V+ K F+LM+ + I P EH C+VD+L R+GQLEKA S I D + WG
Sbjct: 384 VGKVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKDMPLEAEKNVWG 443
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
+LLGAC++H N +LGE+AA+ L++ E +G +L+NIYA+ G W V+ + E
Sbjct: 444 SLLGACQMHGNVQLGELAAKMLVQSDSESSGPYVILSNIYAAAGMWGQVNQVRGQMKERG 503
Query: 479 KKKSPGCSW 487
KK PG SW
Sbjct: 504 VKKQPGYSW 512
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 33/287 (11%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG--NMKAAKEFYDR-MTEKNSV 180
I + G + A+R+FD+M R+V+SW+A++ G ++ AA+ +D M ++ V
Sbjct: 22 ISALARAGDVAAARRVFDAMPHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPSRDVV 81
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+W ++IAG G++ A F + + + W AM ++ G A A ++ M + N
Sbjct: 82 SWNSIIAGCLAHGDLDAASAYFAGAPKRNVATWNAMLAGLLRLGRADDADRLFGEMPKRN 141
Query: 241 VRISEVAMV------GAISACTQLGD-------VEMAAILAKHVDEG----------CCD 277
V +S MV G ++ ++ D V AA+++ +V+ G
Sbjct: 142 V-VSYTTMVDGLARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVEATKLFEAMP 200
Query: 278 RTNYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
N V+ A+I + K G ++ A R F I+ KDVIS+++MI + +G +EA+ +
Sbjct: 201 EKNVVACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAV 260
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
M EG++P+ T I VLTACS L+ G T IK + E
Sbjct: 261 MFREGVKPDHATLIAVLTACSALALLRQGKS-----THAIAIKAMLE 302
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 254/473 (53%), Gaps = 23/473 (4%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
QVH +L+KT T + Q + L + L +ARQVFD++P+ + + S+I
Sbjct: 127 QVHGFLIKTGT----WSDLFLQNCLIGLYIKCGFLGFARQVFDRMPE-RDSVSYNSMIDG 181
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT-KIGLMDDA 136
+V + G++ S ++ R ++I GY + +D A
Sbjct: 182 YV----------------KCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVA 225
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
++LFD M E+++ISW++M+ GY G ++ AK ++ M ++ VTW MI GYGK G V
Sbjct: 226 EKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVH 285
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISAC 255
AK +FD++ D + +M YVQN Y A+E++ M +E ++ E ++V +SA
Sbjct: 286 VAKTLFDQMPHRDVVAYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAI 345
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + A + ++ E + + ALI M+SKCG + A R F I++K + ++
Sbjct: 346 AQLGRLSKAIDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWN 405
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI A HG + A DM ++ I+P+ +TF+GVL ACSH GLV++G FELM R
Sbjct: 406 AMIGGLAVHGLGESAFDMLFQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRK 465
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
I+P +H CMVD+L RSG ++ A +LI + W L AC H E GE+
Sbjct: 466 HKIEPRLQHYGCMVDILARSGSIKLARNLIEGMPIEPNDVIWRTFLTACSHHKEFETGEL 525
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL+ G + LL+N+YAS G WKD V+ M+ E +K PGCSWI
Sbjct: 526 VAKHLILXGGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWI 578
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 191/422 (45%), Gaps = 78/422 (18%)
Query: 54 YARQVFDQ-----IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
+AR VF + + + FLW +I++H R+++ L M V F+ S
Sbjct: 52 FARCVFHEHHVSSSGEVEDPFLWNVVIKSHSHGVDPRKALFLLCLMLESSVPVDKFSLSL 111
Query: 109 VLNACARVPSLLEA---------------------VICGYTKIGLMDDAQRLFDSMAERN 147
L AC+R+ + E +I Y K G + A+++FD M ER+
Sbjct: 112 ALKACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERD 171
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMT--EKNSVTWVAMIAGYGKCGE-VREAKKVFDE 204
+S+++M+ GY CG +++A E +D M ++N +TW +MI GY + + V A+K+FDE
Sbjct: 172 SVSYNSMIDGYVKCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDE 231
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ E D W +M YV++G + A ++ VM + +V V I +LG V +A
Sbjct: 232 MPEKDLISWNSMIGGYVKHGRIEDAKGLFNVMPRRDV----VTWAIMIDGYGKLGLVHVA 287
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
L F ++ ++DV++Y+SM++ + +
Sbjct: 288 KTL-----------------------------------FDQMPHRDVVAYNSMMSGYVQN 312
Query: 325 GKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDGCK-QFELMTRVFGIKPLT 382
EAL++F M E + P++ + + VL+A + G + ++ + F PL+
Sbjct: 313 RYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLGRLSKAIDMHLYIVEKQF---PLS 369
Query: 383 EHL-TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
L ++D+ + G ++ A + + + W A++G VH LGE A L
Sbjct: 370 GKLGVALIDMYSKCGSIQHAMR-VFEGIESKSIDHWNAMIGGLAVH---GLGESAFDMLF 425
Query: 442 EL 443
++
Sbjct: 426 QI 427
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 170/579 (29%), Positives = 282/579 (48%), Gaps = 98/579 (16%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP-K 64
L+ + LKQ+HS ++K+ H+ ++ + P +LSYA +F I +
Sbjct: 31 LLAKCPDIPSLKQIHSLIIKS--GLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ 88
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-- 122
F+W +LIR H L S+ L+++M G+ + TF S+ +CA+ + EA
Sbjct: 89 PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148
Query: 123 --------------------------------------------------VICGYTKIGL 132
+I GY G
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN---------SV--- 180
+DDA+RLFD + ++V+SW+AM+AGY G + A + RM E + SV
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268
Query: 181 --------------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCW 213
+WV A++ Y KCGE+ A+K+FD + + D W
Sbjct: 269 CGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILW 328
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
M Y + A+ +++VM +ENV ++V + + AC LG +++ + ++D+
Sbjct: 329 NTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDK 388
Query: 274 GC--CDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
N VS ++I M++KCG +++A + F + ++ + S+++MI+ A +G ++
Sbjct: 389 NLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAER 448
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL +F +M NEG +P+ +TF+GVL+AC+ G VE G + F M + +GI P +H CM+
Sbjct: 449 ALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMI 508
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLL RSG+ ++A L+ + + D WG+LL AC++H E GE A L EL PE +G
Sbjct: 509 DLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSG 568
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYA G+W D ++ +++ KK PGC+ I
Sbjct: 569 AYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSI 607
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 160/505 (31%), Positives = 272/505 (53%), Gaps = 30/505 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + K+ +QLKQ+ S ++ LT + ++ + +L Y +
Sbjct: 56 LLEKCKSISQLKQIQSQMV--LTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNP 113
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL-GVLTSGFTFSSVLNACARVPSLLE--- 121
T F W IR + + R++++LY ++ + G +T+ + ACAR+ SL+
Sbjct: 114 NT-FSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARL-SLIRMGS 171
Query: 122 -------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
AVI G +D A+++FD R+++SW++M+ GY CG
Sbjct: 172 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGY--CG 229
Query: 163 NMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
N+++A++ +D MT K V+W M+ GY + G + A K+FDE+ + D W AM YV
Sbjct: 230 NLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVH 289
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
K A+ ++ M+ N+ EV MV +SAC+QLG +++ + ++++ +
Sbjct: 290 ANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVAL 349
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
ALI M++KCG + A + F + ++ ++++++I+ A HG + A+ F +M + +
Sbjct: 350 GTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSV 409
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
P++VTF+G+L+AC HGGLVE+G K F M+ F + P +H +CMVDLLGR+G LE+A
Sbjct: 410 MPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAE 469
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
LI DA WGAL AC++H N +GE AA LL++ P +G LLAN+Y
Sbjct: 470 ELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAE 529
Query: 463 KWKDSEIVKMMISETEKKKSPGCSW 487
WK++ + ++ + +K+P SW
Sbjct: 530 MWKEAGKARKLMRQRGVEKTPD-SW 553
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 170/532 (31%), Positives = 276/532 (51%), Gaps = 65/532 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K +H YL+K +D + A L+ + GD L+ A VF++I K W ++I
Sbjct: 278 KIIHGYLIKL---GYDWDPFSANALVDMYAKVGD-LADAISVFEKI-KQPDIVSWNAVIA 332
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV----------PSLLE----- 121
VLH H Q++ L +M R G+ + FT SS L ACA + SL++
Sbjct: 333 GCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMES 392
Query: 122 ------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC-GNMKAAKEFYDRM 174
++ Y+K L++DA+ F+ + E+++I+W+A+++GY+ +M+A F +
Sbjct: 393 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 452
Query: 175 TEK------------------------------------NSVTWV--AMIAGYGKCGEVR 196
E +S +V ++I YGKC V
Sbjct: 453 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 512
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
+A+++F+E + D + +M Y Q G + A++++ M+ ++ ++AC
Sbjct: 513 DAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA 572
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L E L H+ + + N+L++M++KCG +D A R FS + + ++S+S+
Sbjct: 573 NLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSA 632
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI A HG ++AL +F +M EG+ PN +T + VL AC+H GLV + FE M +F
Sbjct: 633 MIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELF 692
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
G KP+ EH CM+DLLGR+G++ +A L+ +A WGALLGA ++H + ELG A
Sbjct: 693 GFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRA 752
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A L L PEK+G LLANIYAS GKW++ V+ ++ +++ KK PG SWI
Sbjct: 753 AEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWI 804
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 221/516 (42%), Gaps = 105/516 (20%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N YAR++ D+ + W++LI + + +++ + +MH LGV + FTFSSVL
Sbjct: 106 NFGYARKLVDESSE-PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164
Query: 111 NACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC+ V L ++ Y K D++RLFD + ERNV+
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224
Query: 150 SWSAMVAGYAN---CGNMKAAKEFYDRM---TEKNSVTWVAMIAG--------------- 188
SW+A+ + Y CG +A FY+ + + N + +M+
Sbjct: 225 SWNALFSCYVQIDFCG--EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 189 --------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
Y K G++ +A VF++I +PD W A+ V + + +
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+E+ M++ + + + A+ AC +G E+ L + + + +VS L+
Sbjct: 343 ALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVD 402
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKC L+ A F+ + KD+I+++++I+ ++ + + EAL +F++M EGI NQ T
Sbjct: 403 MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 462
Query: 349 FIGVLTACS-----------HGGLVEDG-----------------CKQFELMTRVF---G 377
+L + + HG V+ G C E R+F
Sbjct: 463 LSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT 522
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF---CDAGTWGALLGACKVHVNAELGE 434
I L T M+ + GQ E+A L ++ +D D +LL AC E G+
Sbjct: 523 IGDLVS-FTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGK 581
Query: 435 IAARHLLELG---PEKTGNSALLANIYASMGKWKDS 467
H+L+ G GNS L N+YA G D+
Sbjct: 582 QLHVHILKYGFVLDIFAGNS--LVNMYAKCGSIDDA 615
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 174/378 (46%), Gaps = 49/378 (12%)
Query: 33 QYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYA 92
++H + + L + L LP A ++ +P+ +Q T+ I N + +F + + Y+
Sbjct: 5 RHHSFQKPLHQRLHLP---FKPAPKLIQTVPQF-SQDPQTTAILNLIDKGNFTPTSVSYS 60
Query: 93 KMHRLGVLTSGFTFSSVLNA------CARVPSLLEAVICGYTKIGLMDDAQRLFDSMAER 146
K+ T ++A + PS+ +I Y+K A++L D +E
Sbjct: 61 KLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEP 120
Query: 147 NVISWSAMVAGYAN----CGNMKAAKEFYDRMTEKNSVTW-------------------- 182
+++SWSA+++GYA G + A E + + N T+
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 183 -VAMIAG--------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
V +++G Y KC E ++K++FDEI E + W A+ CYVQ +
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCG 240
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A+ ++ M ++ +E ++ ++ACT L D I+ ++ + D + +NAL+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M++K G L A F +IK D++S++++I H ++AL++ +M+ GI PN
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIF 360
Query: 348 TFIGVLTACSHGGLVEDG 365
T L AC+ GL E G
Sbjct: 361 TLSSALKACAGMGLKELG 378
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 250/459 (54%), Gaps = 19/459 (4%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
Y L+R GD LS A ++F I CK W S+I ++ L+ KM
Sbjct: 162 YILNSLVRFYGACGD-LSMAERLFKGI-SCKDVVSWNSMISAFAQGNCPEDALELFLKME 219
Query: 96 RLGVLTSGFTFSSVLNACARVPSL-LEAVICGYT-KIGLMDDAQRLFDSMAERNVISWSA 153
R V+ + T VL+ACA+ L +C Y + G+ D + +A
Sbjct: 220 RENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVD------------LTLCNA 267
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
M+ Y CG++ A++ +D M E++ +W M+ GY K G+ A+ VF+ + + + W
Sbjct: 268 MLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAW 327
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENV-RISEVAMVGAISACTQLGDVEMAAILAKHVD 272
+ Y QNG K A+ ++ ++ + + EV +V +SAC QLG +++ + ++
Sbjct: 328 NVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIK 387
Query: 273 -EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
EG + +S +L+ M++KCG L+ A F ++ +DV +S+MI HG+ + A+
Sbjct: 388 REGIVLNCHLIS-SLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAI 446
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
D+F +M+ ++PN VTF VL ACSH GLV++G F M V+G+ P +H CMVD+
Sbjct: 447 DLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDI 506
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
LGR+G LE+A LI + A WGALLGAC +H+N ELGE+A+ LL+L P G
Sbjct: 507 LGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAI 566
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
LL+NIYA G+W+ ++ ++ +TE KK PGCS I +
Sbjct: 567 VLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEA 605
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 279/497 (56%), Gaps = 28/497 (5%)
Query: 1 MTSKYLVPRSKTF--NQLKQVHSYLLK-TLTKPHDQYHYYAQFLIRLLQLPGDNL---SY 54
+ ++Y+ F QLK++H++++K +L++ + FL+ + DNL SY
Sbjct: 9 LENRYITSLKNCFKITQLKKIHAHVVKLSLSQ--------SNFLVTKMLDSCDNLGHVSY 60
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM--HRLG-VLTSGFTFSSVLN 111
A +F Q+ F + ++IR + + H +I ++ +M H V FTF V+
Sbjct: 61 ATLLFKQLLHPNI-FTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIK 119
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+C ++C ++G M ++ A+ + I+ +A++ Y G++ A + +
Sbjct: 120 SCT-------GILC--HRLG-MQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVF 169
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M+ ++ ++W ++I GY K G++ A+++FD++ W M Y + G A++
Sbjct: 170 EEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALD 229
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M+ + E++++ + AC QLG +E+ + + D+ R + NALI M++
Sbjct: 230 VFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYA 289
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG +D AW F ++ KDVIS+S+MI A+HGK EA+ +F +M + PN++TF+G
Sbjct: 290 KCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLG 349
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL ACSH GL ++G K F++M+ + I+P EH C++DLLGRSG L +A I
Sbjct: 350 VLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIK 409
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D+ W +LL +C++H N ++ IA + L+EL PE++GN LLAN+YA GKW+D ++
Sbjct: 410 PDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIR 469
Query: 472 MMISETEKKKSPGCSWI 488
+I KK+PG S I
Sbjct: 470 KLIRNKRIKKTPGSSSI 486
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 251/442 (56%), Gaps = 22/442 (4%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L AR+ FD +P+ ++ W +++ + + + + L+ +M G+ T+ +V+
Sbjct: 209 DLEAARRYFDCMPE-RSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVI 267
Query: 111 NACARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
+AC+ P L +++ + L + N +A++ YA CG++ AA+
Sbjct: 268 SACSSRGDPCLAASLV------------RTLHQKQIQLNCFVRTALLDMYAKCGSIGAAR 315
Query: 169 EFYDRM-TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+D + +NSVTW AMI+ Y + G + A+++F+ + + W +M Y QNG +
Sbjct: 316 RIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSA 375
Query: 228 AAIEMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
AIE++K M + + EV MV ISAC LG +E+ + + + E + NA+
Sbjct: 376 MAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAM 435
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+S+CG ++ A R F + +DV+SY+++I+ FA HG EA+++ M+ GIEP++
Sbjct: 436 IFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDR 495
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
VTFIGVLTACSH GL+E+G K FE + P +H CMVDLLGR G+LE A +
Sbjct: 496 VTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTME 550
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
AG +G+LL A ++H ELGE+AA L EL P+ +GN LL+NIYAS G+WKD
Sbjct: 551 RMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKD 610
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
E ++ + + KK+ G SW+
Sbjct: 611 VERIREAMKKGGVKKTTGWSWV 632
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 207/457 (45%), Gaps = 64/457 (14%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLI----RLLQLPGDNLSYARQVFDQ 61
+ R F+ L+Q+H+ ++ H+ Y+ LI RL P Y +F+
Sbjct: 7 IASRVGNFSHLRQLHAQIIHNSLHHHN---YWVALLINHCTRLRAPP----HYTHLLFNS 59
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC-------- 113
F++TS++R + + +L++ M GV F + ++ +
Sbjct: 60 TLNPNV-FVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGIGFH 118
Query: 114 ARVPSL--------LEAVICGYTKIGLMDDAQRLFDSMA--ERNVISWSAMVAGYANCGN 163
A V L AVI Y ++G + A+++FD + ER V W+AMV+GY +
Sbjct: 119 AHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWES 178
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
A+ +D M E+N +TW AM+ GY K ++ A++ FD + E W AM Y QN
Sbjct: 179 EGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQN 238
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G A+ + ++ M + E V ISAC+ GD +AA L + + + +V
Sbjct: 239 GLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVR 298
Query: 284 NALIHMHSKCGYLDLAWREF-------------------SRIKN-------------KDV 311
AL+ M++KCG + A R F +R+ N ++V
Sbjct: 299 TALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNV 358
Query: 312 ISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
++++SMI +A +G+S A+++F +M + + P++VT + V++AC H G +E G
Sbjct: 359 VTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVR 418
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
+T IK M+ + R G +E A + +
Sbjct: 419 FLTE-NQIKLSISGHNAMIFMYSRCGSMEDAKRVFQE 454
>gi|242059647|ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
gi|241930944|gb|EES04089.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
Length = 530
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 222/387 (57%), Gaps = 4/387 (1%)
Query: 106 FSSVLNACARVPSL----LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
FS+ A A +P+ +++C + + + A+ LF +M R +SW+AMV Y +
Sbjct: 134 FSAAHAALADIPAPDAVSFNSLLCAHARNASVRPAESLFAAMRSRTQVSWNAMVVLYVSA 193
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
G++ +A+ +D M +++ +W +IAGY K G V+ A+++FD++ + AM Y
Sbjct: 194 GDLVSARRVFDEMPTRDTASWSVLIAGYCKGGLVQNARELFDKMPSKNLVARTAMINGYA 253
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
Q G KAA+ +++ + + MVG ISA +Q+G E+A + +VD +R
Sbjct: 254 QTGQPKAALALFRDLEAAGIEPDGATMVGVISAVSQIGSTELAGWVGAYVDRKKIERNVK 313
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V AL+ MH+KCG ++ A F I D Y+++I+ A HG + AL +F +M+ +
Sbjct: 314 VLTALVDMHAKCGNIEQALSAFREIPQPDAYPYTALISGLATHGHEKLALSVFERMQVQA 373
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
++P+ +TF+GVLTACSH GLV+ G + +E M R +GI +H C++D+LGR+G++E+A
Sbjct: 374 VKPDPITFVGVLTACSHTGLVDKGLEYWEAMVRDYGIVRRADHYACVIDMLGRAGRIEEA 433
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
++ G GALL ACK + N E+ EI A L EL P TGN LL+NIYA
Sbjct: 434 FEMVQTMPMGPHPGALGALLSACKTYENVEIAEIVANKLFELEPWNTGNYILLSNIYAGK 493
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
W+++E V+ ++ K+PG +W
Sbjct: 494 ELWEEAERVRSLMRTKLPFKNPGSTWF 520
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 267/480 (55%), Gaps = 27/480 (5%)
Query: 14 NQLKQVHSYLLKTLTKPHDQYHYYAQFLI-RLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
NQLKQ+H+Y L+ + +FLI +LLQLP +L YA +FDQIPK + +L+
Sbjct: 2 NQLKQIHAYSLRNGLD-------HTKFLIEKLLQLP--DLPYACTLFDQIPK-PSVYLYN 51
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI--CGYTKI 130
I+ H + LLY +M G + ++F+ + ACA + ++ + + K
Sbjct: 52 KFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKS 111
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G D + + +A++ YA G +++A++ +D M ++ TW ++IAGY
Sbjct: 112 GFASD------------MFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYA 159
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMV 249
+ G + A ++F+++ + W A+ Y QNG A+EM+ + E + +EV++
Sbjct: 160 RSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIA 219
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+ AC+QLG +++ + + + YVSNA++ +H++CG ++ A + F I +K
Sbjct: 220 SVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSK 279
Query: 310 -DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
++ S+++MI A HG+ +AL ++ +M + P+ VTF+G+L AC+HGG+V +G +
Sbjct: 280 RNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQL 339
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
FE M F + P EH C+VDLLGR+G+L++A++LI + D+ WG LLGAC H
Sbjct: 340 FESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHG 399
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N ELGE+AA L +L P GN +L+NIYA G W ++ M+ K G S+I
Sbjct: 400 NVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYI 459
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 253/462 (54%), Gaps = 24/462 (5%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSS 108
+++ Y F Q+ F++ ++I+ V + +++ Y M VL + +TFSS
Sbjct: 182 NSVHYPVFAFTQMENPNV-FVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSS 240
Query: 109 VLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERN 147
++ AC + ++ A++ Y+K+ ++ +A+++FD M ER+
Sbjct: 241 LVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERD 300
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
+W+AMV+ A G+M +A++ ++ M E+N+ TW MI GY + G V A+ +F+++
Sbjct: 301 AFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPT 360
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W M CY QN + A+ +Y MR + EV M SAC +G +E+ +
Sbjct: 361 KDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEI 420
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+V + Y+ +AL+ M++KCG LDL+ F ++ +K++ ++++I A HG +
Sbjct: 421 HHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYA 480
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++AL MF M E I PN VTFI +L+AC+H GLV++G +F MTR + I+P H C
Sbjct: 481 EKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGC 540
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
MVD+L +SG L +A LI + ++ WGALL CK+H N E+ E A L+ L P
Sbjct: 541 MVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMN 600
Query: 448 TGNSALLANIYASMGKWKD-SEIVKMMISETEKKKSPGCSWI 488
+G+ LL ++YA W + + I MM + +KK PG SWI
Sbjct: 601 SGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWI 642
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 277/539 (51%), Gaps = 66/539 (12%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVFDQIPKCK 66
RS Q K++ +++ L +P D + RLL L NLS AR +FD++ + +
Sbjct: 34 RSNDVVQAKRLQTHMDLHLYQPTDTF-----LQNRLLHLYAKSGNLSDARDLFDKMSR-R 87
Query: 67 TQFLWTSLIRNHV-------LHAHF------------------------RQSILLYAKMH 95
F W +++ + L A F Q++ + +M
Sbjct: 88 DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147
Query: 96 RLGVLTSGFTFSSVLNACARV---------------PSLLEAVICG------YTKIGLMD 134
G ++ +T SVL+AC+++ SL E+V Y K G +D
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYG 190
A+ LFD M +NV+SW++M++GY G + + + M + VT +++ Y
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYF 267
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+CG + EA K F EI E D CW M V QNG + A+ +++ M ENVR +
Sbjct: 268 QCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISS 327
Query: 251 AISACTQLGDV-EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+S+C +L + + A+ K V G D VS+AL+ M+SKCG AW F R+ +
Sbjct: 328 VVSSCARLASLCQGQAVHGKAVIFGV-DHDLLVSSALVDMYSKCGETADAWIVFKRMLTR 386
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+VIS++SMI +A +GK EAL ++ +M +E ++P+ +TF+GVL+AC H GLVE G F
Sbjct: 387 NVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYF 446
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
++++ G+ P +H +CM++LLGR+G ++KA LI + W LL C+++ +
Sbjct: 447 YSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCD 506
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
GE+AARHL EL P G +L+NIYA+ G+WKD V+ ++ + KK SWI
Sbjct: 507 VNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWI 565
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 264/458 (57%), Gaps = 27/458 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ A ++F+ +P K W ++I + + ++I ++ +MH +++ ++++
Sbjct: 54 IEEAERLFEVMP-VKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQ 112
Query: 112 ACARVPSLLE--------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
C RV ++ G + G +D+A+++FD M ERNV+SW+AMV G
Sbjct: 113 -CGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTG 171
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
YA + A + ++RM E+N +W MI G+ + GE+ A+KVF+E+ E + W M
Sbjct: 172 YAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMI 231
Query: 218 VCYVQNGYAKAAIEMY-KVMRQENVRISEVAMVGAISACTQLGDV----EMAAILAKHVD 272
YVQ G +++A++++ ++++ R +E V + AC+ + + ++ +++K V
Sbjct: 232 TGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVY 291
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR--IKNKDVISYSSMITAFADHGKSQEA 330
+ DRT +V++AL++M+SKCG L +A + F I +D++ ++ MI A+A HG EA
Sbjct: 292 Q---DRT-FVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCGMEA 347
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
+++F M+ G +PN V+++ +L+ACSH GLV++G F+ + R I+ +H C+VD
Sbjct: 348 IELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHACLVD 407
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGN 450
L GR+G+L++A+ I + WG LL C H + E+G++AA+ L + PE G
Sbjct: 408 LCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHGDLEIGQLAAKELEKEDPENAGT 467
Query: 451 SALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYAS KW+++ V++ + E KK PGCSWI
Sbjct: 468 YLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCSWI 505
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 156/287 (54%), Gaps = 10/287 (3%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A++ GY ++ +++A+RLF+ M +NV+SW+ M+ GY + A E ++RM E+N V+
Sbjct: 43 AMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVS 102
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W A+IA +CG V EA++ FDE+ + D W M + ++G A +++ M + NV
Sbjct: 103 WNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNV 162
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+S AMV + +L + A + E +R N +I + G L A +
Sbjct: 163 -VSWNAMVTGYAKNMRLDE-------AFDLFERMPERNLSSWNTMITGFIQNGELAWARK 214
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTFIGVLTACSHGG 360
F+ + K+V+S+++MIT + G+S+ AL +F++M ++ G PN+ TF+ VL ACS
Sbjct: 215 VFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMA 274
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
+ +G +Q L+ + T + ++++ + G+L A + D
Sbjct: 275 GLGEG-QQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDD 320
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 170/332 (51%), Gaps = 33/332 (9%)
Query: 143 MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE-KNSVTWVAMIAGYGKCGEVREAKKV 201
M ER+V++W+A+++GY CG + A+ +DR+ K+ VTW AM++GY + + EA+++
Sbjct: 1 MHERDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERL 60
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
F+ + + W M Y +N AIE+++ M + N+ V+ I+A Q G V
Sbjct: 61 FEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNM----VSWNAVIAALVQCGRV 116
Query: 262 EMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
E A + DE + + +S ++ ++ G +D A + F R+ ++V+S+++M+T
Sbjct: 117 EEA---RRRFDE--MPKRDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTG 171
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
+A + + EA D+F +M E N ++ ++T G +++G + +VF P
Sbjct: 172 YAKNMRLDEAFDLFERMP----ERNLSSWNTMIT-----GFIQNG--ELAWARKVFNEMP 220
Query: 381 LTEHL--TCMVDLLGRSGQLEKAH----SLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+ T M+ + G+ E A +I D + GT+ +LGAC A LGE
Sbjct: 221 EKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDM--AGLGE 278
Query: 435 IAARHLL---ELGPEKTGNSALLANIYASMGK 463
HLL + ++T ++ L N+Y+ G+
Sbjct: 279 GQQVHLLISKSVYQDRTFVASALLNMYSKCGE 310
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 261/484 (53%), Gaps = 13/484 (2%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ R +LKQ+H LLK T H ++ L + NL+YAR VFD+I
Sbjct: 17 LLERCSNIGELKQIHGQLLKKGTIRHKLT--VSRLLTTYASMEFSNLTYARMVFDRISSP 74
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
T +W ++IR + +++LLY +M + + +TF +L AC+ + +L E
Sbjct: 75 NT-VMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAE---- 129
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
T + +R F S V + ++++ YA G++K+A +D + ++ V+W M
Sbjct: 130 --THQIHVQIIKRGFGS----EVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTM 183
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I GY KCG V A K+F + E + W +M V +V+ G K A+ + + M ++ +
Sbjct: 184 IDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDK 243
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ + ++SAC LG +E + ++ + + ALI M+ KCG + A FS+
Sbjct: 244 ITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSK 303
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
++ K V +++++I FA HGK EALD F +M+ GI+P TF VLTACSH GLVE+G
Sbjct: 304 LEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEG 363
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
FE M+ + +KP+ EH CMVDLLGR+G L++A + +A WG+LL AC
Sbjct: 364 KSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACH 423
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H + ELG+ + L+EL PE G LA+I+A+ G+W ++ V+ I PGC
Sbjct: 424 LHKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGC 483
Query: 486 SWIS 489
S I+
Sbjct: 484 STIT 487
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 275/508 (54%), Gaps = 40/508 (7%)
Query: 9 RSKTFNQLKQVHSYLL--KTLTKPH--DQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
R ++ Q+KQVH+ ++ L+ P + + + +R +++A VFDQIP+
Sbjct: 17 RCRSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVR------GAIAHAYLVFDQIPR 70
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG----VLTSGFTFSSVLNACARVPS-- 118
F++ +LIR A R ++ LYA+M R G V TF VL AC + +
Sbjct: 71 -PDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGG 129
Query: 119 -------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
+ A+I + G + A LFD A + ++WSAM+ G A
Sbjct: 130 TGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCA 189
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
G++ AA++ +D K+ V+W MI Y K GE+ A+ +F+ I E D W AM
Sbjct: 190 RRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMISG 249
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
+V+ G A+E+++ M++ + V M+ +SAC GD+++ L + E RT
Sbjct: 250 HVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFL-RT 308
Query: 280 NY---VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+ + NALI M++KCG + A + F +++KDV +++S+I A HG E++D+F K
Sbjct: 309 GFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESIDVFKK 368
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M E + P+++TF+ VL ACSHGG+V+ G + F LM + I+P +H CMVD+LGR+G
Sbjct: 369 MLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGRAG 428
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L++A I K ++ W LLGAC+VH EL E A R LL+ +++G+ LL+N
Sbjct: 429 LLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESGDYVLLSN 488
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPG 484
IYAS G+W +SE ++ ++ ++ K G
Sbjct: 489 IYASAGEWSESEKMRKLMDDSGVNKQAG 516
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 254/474 (53%), Gaps = 19/474 (4%)
Query: 17 KQVHSYLLKTLTKPHD-QYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
+Q+H ++LK H QY+ + + + L L AR VFD PK W +I
Sbjct: 138 RQLHGHVLK-----HGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADV-ITWNMII 191
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV-ICGYTKIGLMD 134
+ F +S L+ M VL + T VL+AC+++ L + Y K
Sbjct: 192 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK----- 246
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
+ E N++ +AM+ YA+CG M +A + M ++ ++W +++G+ GE
Sbjct: 247 ------NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGE 300
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+ A+ FD++ E D W AM Y+++ K A+E+++ M+ NV+ E MV ++A
Sbjct: 301 IDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTA 360
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C LG +E+ + ++D +V NALI M+ KCG +D A F + +D ++
Sbjct: 361 CAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTW 420
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
++MI A +G ++ALDMF M I P+++T+IGVL+AC+H GLV+ G K F MT
Sbjct: 421 TAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTS 480
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
GI+P H C+VDLL R+G+L++A+ +I + ++ WGALL C+V+ +++ E
Sbjct: 481 QHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAE 540
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ + +LEL P+ LL NIYA+ +W D ++ M+ + KK+PGCS I
Sbjct: 541 MVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLI 594
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 157/370 (42%), Gaps = 80/370 (21%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY----------DRMT---------- 175
A+RLFD + E N+ W+ M+ GY+ + Y DR T
Sbjct: 71 ARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR 130
Query: 176 -------------------EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
+ N A++ Y CG++ A+ VFD + D W +
Sbjct: 131 DIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMI 190
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y + G + + ++ VM + V + V +V +SAC++L D+ + +V + C
Sbjct: 191 ISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV-KNCK 249
Query: 277 DRTNYV-SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG---------- 325
+N V NA+I M++ CG +D A F + N+D+IS++++++ F + G
Sbjct: 250 VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFD 309
Query: 326 ---------------------KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+ +EAL++F M+ ++P++ T + VLTAC+H G +E
Sbjct: 310 KMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALEL 369
Query: 365 GCKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G E + + L ++D+ + G ++KA S+ + D TW A++
Sbjct: 370 G----EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTAMI 424
Query: 422 GACKVHVNAE 431
V+ + E
Sbjct: 425 VGLAVNGHGE 434
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 12/258 (4%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G+ + A+++FDEI EP+ W M Y + + + + +Y M + V+
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
T+ +E L HV + +V AL+ M+ CG LD A F DVI
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+++ +I+A+ GK +E+ +FL M ++ + P VT + VL+ACS + G K+
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSY 244
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNA 430
+ ++ M+D+ G+++ A + M+ +D +W ++
Sbjct: 245 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDII---SWTTIVSGF-----T 296
Query: 431 ELGEI-AARHLLELGPEK 447
LGEI AR+ + PEK
Sbjct: 297 NLGEIDVARNYFDKMPEK 314
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 255/473 (53%), Gaps = 23/473 (4%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
QVH +L+K+ T + Q + L L L +ARQVFD++P+ + + S+I
Sbjct: 114 QVHGFLIKSRT----WSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQ-RDSVSYNSMIDG 168
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT-KIGLMDDA 136
+V + G++ S ++ R ++I GY + ++ A
Sbjct: 169 YV----------------KCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVNVA 212
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
+LFD M E+++ISW++M+ GY G ++ AK +D M ++ VTW MI GYGK G V
Sbjct: 213 SKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVH 272
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISAC 255
+AK +FD++ D + +M +VQN Y A+E++ M +E ++ E +V +SA
Sbjct: 273 QAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVIVLSAI 332
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + A + ++ E + + ALI M+SKCG + A R F I++K + ++
Sbjct: 333 AQLGRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWN 392
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI A HG + A DM L++ I+P+ +TF+GVL ACSH GLV++G FELM R
Sbjct: 393 AMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRK 452
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
I+P +H CMVD+L RSG +E A +LI + + W L AC H E GE+
Sbjct: 453 HKIEPRLQHYGCMVDILARSGSIELAKNLIEEMPIEPNDVIWRTFLNACSHHKEFETGEL 512
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL+ + LL+N+YAS G WKD V+ M+ E + +K PGCSWI
Sbjct: 513 VAKHLILQAGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKKIEKLPGCSWI 565
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 266/501 (53%), Gaps = 38/501 (7%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFDQIPKCKT 67
+T L Q+H+ +K+ + D A ++R L +L YA ++F+Q+P+ +
Sbjct: 34 RTIRDLSQIHAVFIKS-GQMRDTLA--AAEILRFCATSDLHHRDLDYAHKIFNQMPQ-RN 89
Query: 68 QFLWTSLIRNHVLHAHFRQSI---LLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-V 123
F W ++IR + I L Y M V + FTF SVL ACA+ + E
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 124 ICGYT-KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE-FYDRMTEKNSVT 181
I G K G D S +V Y CG MK A+ FY + EK+ V
Sbjct: 150 IHGLALKYGFGGDE------------FVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 182 -------------WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
W MI GY + G+ + A+ +FD++ + W M Y NG+ K
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+E+++ M++ ++R + V +V + A ++LG +E+ L + ++ + + +ALI
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKCG ++ A F R+ ++VI++S+MI FA HG++ +A+D F KMR G+ P+ V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
+I +LTACSHGGLVE+G + F M V G++P EH CMVDLLGRSG L++A I++
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
D W ALLGAC++ N E+G+ A L+++ P +G L+N+YAS G W +
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 469 IVKMMISETEKKKSPGCSWIS 489
+++ + E + +K PGCS I
Sbjct: 498 EMRLRMKEKDIRKDPGCSLID 518
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 276/541 (51%), Gaps = 65/541 (12%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ-LPGDNLSYARQVFDQIPKCKTQF 69
K+ LKQ+H+ ++KT+ P Q + Q LP D YA + Q+ +
Sbjct: 33 KSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDP-RYALSLLAQL-RTPNLP 90
Query: 70 LWTSLIRNHVLHAHFR-QSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICG 126
L+ ++IR + + +++Y +M G++ +T VL ACA ++ E V
Sbjct: 91 LYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQ 150
Query: 127 YTKIGLMDD-------------------AQRLFDSMAERNVISWSAMVAGY--------- 158
K+GL D A+++FD+ +R+++SW+ M+ GY
Sbjct: 151 AIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREG 210
Query: 159 --------------------------ANCGNMKAAKEFYDRMTEKNSVTW-----VAMIA 187
A G+++ ++ + + ++V A++
Sbjct: 211 VGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVD 270
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y KCG+ A+KVF E+ + W +M Q G K ++ M++ M++ V+ +V
Sbjct: 271 MYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVT 330
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+V +++C LG +E+ + ++D ++ NAL+ M++KCG +D A F +
Sbjct: 331 LVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMN 390
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
KDV SY++MI A HG+ +ALD+F +M GIEP++VTF+GVLTACSH GLVE+G K
Sbjct: 391 RKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRK 450
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
FE M+ ++ ++P EH CMVDLLGR+G + +A I + DA GALLGACK+H
Sbjct: 451 YFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIH 510
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
ELGE + + ++ P K G L++NIY+S +W+D+ ++ + E +K+PGCS
Sbjct: 511 GKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSS 570
Query: 488 I 488
I
Sbjct: 571 I 571
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 244/442 (55%), Gaps = 24/442 (5%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
L AR +FD++P+ + F W ++ +V + + + L+ +M +++
Sbjct: 6 LRNHKFDLARDLFDKMPE-RDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVS----- 59
Query: 107 SSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
A++ GY + G +D+A+ +F M +N ISW+ ++A Y G ++
Sbjct: 60 -------------WNAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIED 106
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
AK ++ + V+W ++ G+ VR+ + +FD + + D+ W+AM Y QNG +
Sbjct: 107 AKRLFESKMDWTLVSWNCLMGGF-----VRKRRNLFDNMPQRDSISWSAMIAGYSQNGCS 161
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A+ + M+++ R++ + A+S C+ + +E+ L + + YV NAL
Sbjct: 162 EEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNAL 221
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M+ KCG +D A F I KDV+S+++MI +A HG +EAL +F M+ GI P+
Sbjct: 222 LAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDD 281
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
T + VL ACSH GLV+ G + F M R +GI H TCMVDLLGR+GQLE+A +L+
Sbjct: 282 ATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMK 341
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ DA TWGALLGA ++H N ELGE AA+ + E+ P +G LL+ +YA+ G+W D
Sbjct: 342 NMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSD 401
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
+ +++ + KK PG SW+
Sbjct: 402 AGKMRLEMRNKGVKKVPGYSWL 423
>gi|357148182|ref|XP_003574661.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 553
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 249/460 (54%), Gaps = 14/460 (3%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
L+ L G +L AR++FD +P + W S++ + H + +A+ R V
Sbjct: 44 LLTALWRAGRDLPAARRLFDDMPS-RNVISWNSVVAGCLAHGDLDAASAYFARAPRRNVA 102
Query: 101 TSGFTFSSVL------NACARVPSLLEAVICGYTKI-------GLMDDAQRLFDSMAERN 147
+ + ++ +A A + + + YT + G + A+ +FD+M ERN
Sbjct: 103 SWNAMLAGLVRLGRMDDAWALFGEMPQRNVVSYTTMVDGLARRGEVARAREVFDAMPERN 162
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
++SW+AM+ GY A++ ++ M +KN V AMI GY K G+V A+++FD I
Sbjct: 163 LVSWAAMITGYVENAMFDEARKLFEAMPDKNVVACTAMITGYCKDGDVESARRLFDGIPV 222
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W AM YV NG+ + A++++ +M +E V+ ++ ++AC+ L +
Sbjct: 223 KDVISWNAMITGYVHNGHGEEAMKLHIIMFREGVKPDHATLIAILTACSALALLRQGRST 282
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+ + + NAL+ M+SKCG + + F +K +D++S++++I A+A HGK
Sbjct: 283 HAVATKTMLESSTSFCNALMTMYSKCGNVGESELVFMNLKIQDIVSWNTIIAAYAQHGKY 342
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
Q+A+ +F +M G+ PN +T + +L+AC H G V D + F+LM+ + I P EH C
Sbjct: 343 QKAIALFHEMETRGLIPNDITILSMLSACGHVGRVNDSLELFDLMSSKYAISPSAEHYAC 402
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
+VD+LGR+GQLEKA S I + WGALLGA K H N +LGE+AA+ L++
Sbjct: 403 VVDILGRAGQLEKACSYIKKMPFEAERNVWGALLGASKTHGNVQLGELAAKMLVQSDSVS 462
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+G +L+NIYA+ G W + V+ + E KK PG SW
Sbjct: 463 SGPYVMLSNIYAAAGMWGEVNRVRGQMKEKGVKKQPGYSW 502
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 157/329 (47%), Gaps = 28/329 (8%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG-NMKAAKEFYDRMTEKNSVTW 182
I + G + A+R+FD+M R+V+SW+A++ G ++ AA+ +D M +N ++W
Sbjct: 14 ITALARAGDVAAARRVFDAMPRRDVVSWNALLTALWRAGRDLPAARRLFDDMPSRNVISW 73
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
+++AG G++ A F + + W AM V+ G A ++ M Q NV
Sbjct: 74 NSVVAGCLAHGDLDAASAYFARAPRRNVASWNAMLAGLVRLGRMDDAWALFGEMPQRNV- 132
Query: 243 ISEVAMV------GAISACTQLGD-------VEMAAILAKHVD-----------EGCCDR 278
+S MV G ++ ++ D V AA++ +V+ E D+
Sbjct: 133 VSYTTMVDGLARRGEVARAREVFDAMPERNLVSWAAMITGYVENAMFDEARKLFEAMPDK 192
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
A+I + K G ++ A R F I KDVIS+++MIT + +G +EA+ + + M
Sbjct: 193 NVVACTAMITGYCKDGDVESARRLFDGIPVKDVISWNAMITGYVHNGHGEEAMKLHIIMF 252
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
EG++P+ T I +LTACS L+ G + T+ ++ T ++ + + G +
Sbjct: 253 REGVKPDHATLIAILTACSALALLRQGRSTHAVATKTM-LESSTSFCNALMTMYSKCGNV 311
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++ + M+ K D +W ++ A H
Sbjct: 312 GESELVFMNLK-IQDIVSWNTIIAAYAQH 339
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/466 (33%), Positives = 248/466 (53%), Gaps = 51/466 (10%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD++P+ + W +++ YA R+G + F V +A +
Sbjct: 121 ARALFDRMPE-RNVVSWNTMLE-------------AYASAGRMGAACALFDGMPVRDAGS 166
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
++ + G MD+A+RLF+ M ERNV+SW+ M++G A G+ A+ +D M
Sbjct: 167 -----WNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGM 221
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E+N V+W AMI+GY + + EA +F + E D + W M ++QN K A E++
Sbjct: 222 PERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFD 281
Query: 235 VMRQENV-------------------------------RISEVAMVGAISACTQLGDVEM 263
M + NV R ++V +GA+ A + L +
Sbjct: 282 EMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSE 341
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+ + + + N++ ++L+ +++KCG + LA + F KDVIS++ MI A+A
Sbjct: 342 GQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYAH 401
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
HG EA+ ++ KM+ +PN VT++G+L+ACSH GLV++G + FE M + I E
Sbjct: 402 HGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDE 461
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT-WGALLGACKVHVNAELGEIAARHLLE 442
H +C++DL R+G+L+ A LI K + T W ALLG C H N +G++AAR+LLE
Sbjct: 462 HYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLE 521
Query: 443 LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
P+ G LL+NIYAS GKWK++ ++ +++ KK PGCSWI
Sbjct: 522 AEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWI 567
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 164/389 (42%), Gaps = 67/389 (17%)
Query: 95 HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
H + S FS V + R+ L A G + DA+RLFD +R+V+SW+AM
Sbjct: 25 HGAAAVFSTDAFSHVQDPNRRIAELAAA--------GRVPDARRLFDRTPDRDVVSWTAM 76
Query: 155 VAGYANCGNMKAAKEFYDRM-TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
VA YA G + A R +N VTW A+++GY + V EA+ +FD + E + W
Sbjct: 77 VAAYARQGQLHEASALLHRPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSW 136
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQE-----NVRISEVAMVGAISACTQLGD-------- 260
M Y G AA ++ M N+ ++ + G + +L +
Sbjct: 137 NTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERMPERNVM 196
Query: 261 --VEMAAILAK--HVDE------GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
M + LA+ DE G +R NA+I +++ +D A F + +D
Sbjct: 197 SWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERD 256
Query: 311 VISYSSMITAF---ADHGKSQE----------------------------ALDMFLKMRN 339
V S++ MIT F D K+QE AL +F M
Sbjct: 257 VASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLV 316
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV-FGIKPLTEHLTCMVDLLGRSGQL 398
+GI PNQVTF+G + A S+ + +G + +++ + F E + ++ L + G++
Sbjct: 317 DGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIE--SSLMKLYAKCGEI 374
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVH 427
A + D D +W ++ A H
Sbjct: 375 RLARK-VFDLSGEKDVISWNGMIAAYAHH 402
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 266/501 (53%), Gaps = 27/501 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ K L Q+H +K D Y + + ++ D L YAR++ P+
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGVDT-DSY-FTGKLILHCAISISDALPYARRLLLCFPE- 67
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNACARVPSL----- 119
F++ +L+R + S+ ++ +M R G V F+F+ V+ A SL
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 120 ---------LEA-VICGYTKIGL------MDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
LE+ + G T IG+ ++ A+++FD M + N+++W+A++ +
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+ A+E +D+M +N +W M+AGY K GE+ AK++F E+ D W+ M V N
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G + ++ +++ + +EV++ G +SAC+Q G E IL V++ V+
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVN 307
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKD-VISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
NALI M+S+CG + +A F ++ K ++S++SMI A HG+ +EA+ +F +M G+
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
P+ ++FI +L ACSH GL+E+G F M RV+ I+P EH CMVDL GRSG+L+KA+
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 427
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
I A W LLGAC H N EL E + L EL P +G+ LL+N YA+ G
Sbjct: 428 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487
Query: 463 KWKD-SEIVKMMISETEKKKS 482
KWKD + I K MI + KK +
Sbjct: 488 KWKDVASIRKSMIVQRIKKTT 508
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/495 (32%), Positives = 263/495 (53%), Gaps = 30/495 (6%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
++ + NQLKQ+ S+L T H Q H+YA LIR L NL YA Q+F+ I
Sbjct: 12 ILTKINHLNQLKQLQSHLT---TLGHSQTHFYAFKLIRFCSLNLSNLHYAHQIFNHI-HS 67
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
+L+T++I H + L+ M + + F + VL + + L++ V
Sbjct: 68 PNIYLFTAIITAFSSQQH--TTFKLFKTMLNSNIRPNNFIYPHVLKS-VKERFLVDLVHA 124
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
K G ++ + + V S+S ++ G ++ A + +D M+E+N V + +
Sbjct: 125 QIVKCGFLN-----YPVVETSLVDSYSKVLGG------LRDAHKVFDEMSERNIVVFTVL 173
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ------- 238
++GY + G+V + VFDE+ + D W A+ QNG+ I +++ M
Sbjct: 174 VSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEG 233
Query: 239 ---ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
+ + ++V +V +SAC G +++ + +V ++VSNAL+ M+ KCG
Sbjct: 234 GFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGS 293
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR--NEGIEPNQVTFIGVL 353
L+LA + F + K + S++SMI +A HGK ++A+ F KM G+ P++VTFIG+L
Sbjct: 294 LELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLL 353
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC+HGGLVE GC FE+M + +GI+P H C++DLLGR+GQ ++A ++ D
Sbjct: 354 NACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPD 413
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WG+LL CKVH +L E AA+ L+E+ P G +LANIY +GKW + V
Sbjct: 414 EVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSK 473
Query: 474 ISETEKKKSPGCSWI 488
+ + + K PGCSWI
Sbjct: 474 LKQQKSYKIPGCSWI 488
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 253/462 (54%), Gaps = 24/462 (5%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSS 108
+++ Y F Q+ F++ ++I+ V + +++ Y M VL + +TFSS
Sbjct: 85 NSVHYPVFAFTQMENPNV-FVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSS 143
Query: 109 VLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERN 147
++ AC + ++ A++ Y+K+ ++ +A+++FD M ER+
Sbjct: 144 LVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERD 203
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
+W+AM++ A G+M +A++ ++ M E+N+ TW MI GY + G V A+ +F+++
Sbjct: 204 AFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPT 263
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W M CY QN + A+ +Y MR + EV M SAC +G +E+ +
Sbjct: 264 KDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEI 323
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+V + Y+ +AL+ M++KCG LDL+ F ++ +K++ ++++I A HG +
Sbjct: 324 HHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYA 383
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++AL MF M E I PN VTFI +L+AC+H GLV++G +F MTR + I+P H C
Sbjct: 384 EKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGC 443
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
MVD+L +SG L +A LI + ++ WGALL CK+H N E+ E A L+ L P
Sbjct: 444 MVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMN 503
Query: 448 TGNSALLANIYASMGKWKD-SEIVKMMISETEKKKSPGCSWI 488
+G+ LL ++YA W + + I MM + +KK PG SWI
Sbjct: 504 SGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWI 545
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 249/449 (55%), Gaps = 20/449 (4%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG---------V 99
+++ YA +F ++ +L+ ++IR ++ + +I Y +M R +
Sbjct: 33 NEDMDYASFLFKEVID-PNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLI 91
Query: 100 LTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
L FTF V+ ACAR+ G +G AQ F + ++I+ +A++ Y
Sbjct: 92 LPDEFTFPFVVKACARL---------GLHNLGKQVHAQ-FFKFGKKSHLITENALIDMYT 141
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
C N+ A +D M E+ +++W +I+G+ + G++R A+ +FDE+ W A+
Sbjct: 142 KCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISG 201
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
Y + G A+++++ M+ + E +++ + AC +LG +E + R
Sbjct: 202 YTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRR 261
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
+ NALI M++KCG +D A + F +++ +DVIS+S+MI A+HGK +EA+ +F +M+
Sbjct: 262 TCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMKQ 321
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
I+PN +TF+G+L+AC+H G E+G F+ M + F I+P EH +VDLLGR+G+L
Sbjct: 322 TNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLS 381
Query: 400 KAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYA 459
+A ++ D+ WG+LL +C+ H N E+ IA HL EL P+ TGN LL+NIYA
Sbjct: 382 QALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYA 441
Query: 460 SMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+GKW D ++ ++ KK+PGCS I
Sbjct: 442 DLGKWDDVSRMRKLVRSKRMKKTPGCSLI 470
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 268/486 (55%), Gaps = 25/486 (5%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
+F L +VH++ ++ Q Y A ++ L G +++A +VF Q+ + L
Sbjct: 25 SFRDLLRVHAHAVRLSLS---QSSYLATQIVHLCNAHG-RVAHATRVFSQVREPNLH-LH 79
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVL-----TSG--FTFSSVLNACARVPSL-LEAV 123
++I+ + + +I +Y +M R T G FT+ +L AC + +L L
Sbjct: 80 NAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMALDLGKQ 139
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
+ G+ + S E N I ++++ Y G++ A++ +D M E++ V+W
Sbjct: 140 VHGH-----------VVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWN 188
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+I+ + + G++R+A+ VF+ + + W A+ Y G A+E +++M+ E
Sbjct: 189 TVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEP 248
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+V++V + AC QLG +E+ + + + R YV NAL+ M++KCG +D A + F
Sbjct: 249 DDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLF 308
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLV 362
+ + KDVIS+S+M+ A HG++QEA+ +F +M +G ++PN +TF+G+L+ACSH GL+
Sbjct: 309 NGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLL 368
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
++G F+ M V+GI+P EH C+VDLL RSGQ+++ LI D DA WG++L
Sbjct: 369 DEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLN 428
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC+ H + + +AA L+ L PE GN +LAN+YA+ +W + + I +K+
Sbjct: 429 ACRSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKT 488
Query: 483 PGCSWI 488
PGCS I
Sbjct: 489 PGCSLI 494
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 253/474 (53%), Gaps = 19/474 (4%)
Query: 17 KQVHSYLLKTLTKPHD-QYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
+Q+H ++LK H QY+ + + + L L AR VFD PK W +I
Sbjct: 159 RQLHGHVLK-----HGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADV-ITWNMII 212
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV-ICGYTKIGLMD 134
+ F +S L+ M VL + T VL+AC+++ L + Y K
Sbjct: 213 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK----- 267
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
+ E N++ +AM+ YA+CG M +A + M ++ ++W +++G+ GE
Sbjct: 268 ------NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGE 321
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+ A+ FD++ E D W AM Y+++ K A+E+++ M+ NV+ E MV ++A
Sbjct: 322 IDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTA 381
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C LG +E+ + ++D +V NALI M+ KCG +D A F + +D ++
Sbjct: 382 CAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTW 441
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
++MI A +G ++ALDMF M I P+++T+IGVL+AC+H GLV+ G K F MT
Sbjct: 442 TAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTS 501
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
GI+P H C+VDLL R+G+L++A+ +I + ++ WGALL C+V+ +++ E
Sbjct: 502 QHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAE 561
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ + +LEL P+ LL NIYA+ +W D ++ M+ + KK PGCS I
Sbjct: 562 MVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLI 615
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 160/382 (41%), Gaps = 80/382 (20%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY----------DR 173
C + G A+RLFD + E N+ W+ M+ GY+ + Y DR
Sbjct: 80 FCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDR 139
Query: 174 MT-----------------------------EKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
T + N A++ Y CG++ A+ VFD
Sbjct: 140 YTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDV 199
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ D W + Y + G + + ++ VM + V + V +V +SAC++L D+
Sbjct: 200 CPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG 259
Query: 265 AILAKHVDEGCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+ +V + C +N V NA+I M++ CG +D A F + N+D+IS++++++ F +
Sbjct: 260 KKVHSYV-KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTN 318
Query: 324 HG-------------------------------KSQEALDMFLKMRNEGIEPNQVTFIGV 352
G + +EAL++F M+ ++P++ T + V
Sbjct: 319 LGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSV 378
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYK 409
LTAC+H G +E G E + + L ++D+ + G ++KA S+ +
Sbjct: 379 LTACAHLGALELG----EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS 434
Query: 410 DFCDAGTWGALLGACKVHVNAE 431
D TW A++ V+ + E
Sbjct: 435 QR-DKFTWTAMIVGLAVNGHGE 455
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 12/258 (4%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G+ + A+++FDEI EP+ W M Y + + + + +Y M + V+
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
T+ +E L HV + +V AL+ M+ CG LD A F DVI
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+++ +I+A+ GK +E+ +FL M ++ + P VT + VL+ACS + G K+
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSY 265
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNA 430
+ ++ M+D+ G+++ A + M+ +D +W ++
Sbjct: 266 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDII---SWTTIVSGF-----T 317
Query: 431 ELGEI-AARHLLELGPEK 447
LGEI AR+ + PEK
Sbjct: 318 NLGEIDVARNYFDKMPEK 335
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 266/501 (53%), Gaps = 27/501 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ K L Q+H +K D Y + + ++ D L YAR++ P+
Sbjct: 3 LLNSCKNLRALTQIHGLFIKYGVDT-DSY-FTGKLILHCAISISDALPYARRLLLCFPE- 59
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNACARVPSL----- 119
F++ +L+R + S+ ++ +M R G V F+F+ V+ A SL
Sbjct: 60 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 119
Query: 120 ---------LEA-VICGYTKIGL------MDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
LE+ + G T IG+ ++ A+++FD M + N+++W+A++ +
Sbjct: 120 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 179
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+ A+E +D+M +N +W M+AGY K GE+ AK++F E+ D W+ M V N
Sbjct: 180 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 239
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G + ++ +++ + +EV++ G +SAC+Q G E IL V++ V+
Sbjct: 240 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVN 299
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKD-VISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
NALI M+S+CG + +A F ++ K ++S++SMI A HG+ +EA+ +F +M G+
Sbjct: 300 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 359
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
P+ ++FI +L ACSH GL+E+G F M RV+ I+P EH CMVDL GRSG+L+KA+
Sbjct: 360 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 419
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
I A W LLGAC H N EL E + L EL P +G+ LL+N YA+ G
Sbjct: 420 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 479
Query: 463 KWKD-SEIVKMMISETEKKKS 482
KWKD + I K MI + KK +
Sbjct: 480 KWKDVASIRKSMIVQRIKKTT 500
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 245/450 (54%), Gaps = 13/450 (2%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-----SGFT 105
+L AR++FD+ + W S+I + H + +A V T +G
Sbjct: 63 HLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLV 122
Query: 106 -FSSVLNACARVPSLLEAVICGYTKI-------GLMDDAQRLFDSMAERNVISWSAMVAG 157
V++A + E + YT + G ++ A+ +FDSM +RN++SW+AM++G
Sbjct: 123 RLGRVVDAQRLFDEMPERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISG 182
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
G A+E ++ M EKN V AMI G+ K G+V A+++FD I D W AM
Sbjct: 183 CVENGMFVEARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMI 242
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
YV NG+ + A+ ++ +M +E V+ ++ ++AC+ L + + +
Sbjct: 243 AGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKAMLE 302
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
SNAL+ M+SKCG + + F ++ KD++S++++I A+A HGK Q+ + +F +M
Sbjct: 303 SGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIAAYAQHGKYQKVIALFHEM 362
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
G+ P+ +TF+ VL+AC H G+V+ K F+LM+ + I P EH C+VD+L R+GQ
Sbjct: 363 EVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQ 422
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
LEKA S I + WG+LLGAC++H N +LGE+AA+ L++ + +G +L+NI
Sbjct: 423 LEKASSYIKHMPLKAEKNVWGSLLGACQIHGNVQLGELAAKMLVQSDSQSSGPYVILSNI 482
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSW 487
YA+ G W ++ + E KK PG SW
Sbjct: 483 YAAAGMWGQVNQIRGQMKERGVKKQPGYSW 512
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAM----------------------------- 154
I + G + A+R+FD+M R+V+SW+A+
Sbjct: 22 ISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPSRDVV 81
Query: 155 -----VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
+AG G++ AA ++ E+N TW AM+AG + G V +A+++FDE+ E +
Sbjct: 82 SWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVDAQRLFDEMPERN 141
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
+ M + G + A E++ M N+ +S AM IS C + G + A+
Sbjct: 142 VVSYTTMVDWLARRGEVERAREVFDSMPDRNL-VSWAAM---ISGCVENGMF----VEAR 193
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
+ E ++ A+I H K G +D A R F I+ KDVIS+++MI + +G +E
Sbjct: 194 ELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNGHGEE 253
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
A+ + M EG++P+ T I VLTACS L+ G T IK + E
Sbjct: 254 AMRLHALMFREGVKPDHATLIAVLTACSALALLRQGKS-----THAIAIKAMLE 302
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/575 (29%), Positives = 287/575 (49%), Gaps = 96/575 (16%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFL-IRLLQLPGDNLSYARQVFDQIPK 64
L+ + ++ KQ+H++++KT H+ ++ + + GD +SYA +F+ I +
Sbjct: 35 LLSKCQSIRTFKQIHAHIIKT--GLHNTLFALSKLIEFSAVSRSGD-ISYAISLFNSIEE 91
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--- 121
F+W S+IR + +++ + +M GV + +TF +L +CA++ S E
Sbjct: 92 -PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQ 150
Query: 122 -------------------------------------------------AVICGYTKIGL 132
A+I GY G
Sbjct: 151 IHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGY 210
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN---------SV--- 180
MD A++LFD M ++V+SW+AM+AGYA G K A ++ M + N SV
Sbjct: 211 MDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSA 270
Query: 181 --------------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCW 213
+W+ A+I Y KCG+++ A+++FD++ E D W
Sbjct: 271 CAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISW 330
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
M Y K A+ +++ M V +E+ + + +C LG +++ + ++++
Sbjct: 331 NVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINK 390
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+ +S +LI +++KCG + A + F +K K + S+++MI A HG++ +A ++
Sbjct: 391 NFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFEL 450
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F KM ++GIEPN++TF+G+L+AC H GLV+ G + F M + + I P ++H CM+DLLG
Sbjct: 451 FSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLG 510
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R+G E+A SL+ + + D WG+LLGAC+ H ELGE+ A L EL P+ G L
Sbjct: 511 RAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVL 570
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+NIYA GKW D ++ +++ KK PGC+ I
Sbjct: 571 LSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTI 605
>gi|414879049|tpg|DAA56180.1| TPA: hypothetical protein ZEAMMB73_301223 [Zea mays]
Length = 534
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 218/387 (56%), Gaps = 4/387 (1%)
Query: 106 FSSVLNACARVPSL----LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
F + A A +P+ +++C + + + A+ LF +M R +SW+AMV Y +
Sbjct: 134 FPAAHAALADIPAPDAVSFNSLLCAHARNASVRPAESLFAAMPTRTQVSWNAMVVLYVSA 193
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
G++ AA +D M +++ + + +I GY KCG V+ A+++FD++ D AM Y
Sbjct: 194 GDLAAACRVFDEMPTRDTASSMVLIVGYCKCGLVQNARELFDKMPTKDLVARTAMINGYA 253
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
Q G K A+ +++ + + MVG ISA +Q+G E+A + +VD +R
Sbjct: 254 QTGRPKVALALFRDLEAAGIEPDGATMVGVISAVSQIGSTELAGWVGAYVDRKKIERNEK 313
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V AL+ MH+KCG ++ A F I D Y+++I+ A HG AL +F +MR E
Sbjct: 314 VLTALVDMHAKCGNIEQALSAFREIPRPDAYPYTALISGLATHGHENLALSVFERMRAED 373
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
I+P+ +TF+GVLTACSH G VE G + +E M + +GI+ +H C++D+LGR+G++E+A
Sbjct: 374 IKPHPITFVGVLTACSHAGNVEKGLEYWEAMVQDYGIERHADHYACVIDMLGRAGRIEEA 433
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
++ G GALL ACK + N E+ E+ A L EL P TGN LL+NIYA
Sbjct: 434 FEMVQTMPMGPHPGALGALLSACKTYDNVEIAEVVANKLFELEPWNTGNYILLSNIYAGK 493
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
W+++E V+ ++ KSPG +W
Sbjct: 494 ELWEEAERVRSLMRTKLPFKSPGSTWF 520
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 250/492 (50%), Gaps = 60/492 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VFDQ+P K+ W S+I H H QS + +M LG+ S TF+ L +C+
Sbjct: 82 ARLVFDQMP-IKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS 140
Query: 115 ------------------RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
+P L +++ Y ++ +D A +F ++ +++++SW+ ++
Sbjct: 141 LPQGLSIHGYITKLGLDLHLP-LANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILG 199
Query: 157 GYANCGNMKAAKEFYDRM----TEKNSVTWVAMI-------------------------- 186
GY + G++ +++M +S+ +V +I
Sbjct: 200 GYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDH 259
Query: 187 ---------AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
A Y KC ++ A++VFD + E W +M Y Q GY A+ ++ ++
Sbjct: 260 KDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLL 319
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
+ R +E+ + +SAC ++G + M + +++ V +LIHM KCG +
Sbjct: 320 RTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIK 379
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTAC 356
A F RI NKD+ +S+MI +A HG +EAL++F KM+NE GI+P+ + + VL AC
Sbjct: 380 KAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLAC 439
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
SH GL+EDG K F M + FGI+P +H +C+VDLLGR+G +E A I + A
Sbjct: 440 SHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARV 499
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
W L AC H N ELGE AA++L +L P TGN L+ N+Y SMGKWK++ + +I+
Sbjct: 500 WAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSIINA 559
Query: 477 TEKKKSPGCSWI 488
K PG S I
Sbjct: 560 RGLVKEPGWSQI 571
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/266 (18%), Positives = 111/266 (41%), Gaps = 45/266 (16%)
Query: 95 HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
H GV S FTF VL ACA++PSL +DA +L + +
Sbjct: 20 HTSGVHGSEFTFPFVLKACAKLPSL--------------EDATKLHSHI----------L 55
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+ G+ + + A++ Y KC A+ VFD++ W
Sbjct: 56 LTGF-----------------QAHVFVQTALVDVYSKCCCFHSARLVFDQMPIKSLVSWN 98
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
++ + ++ + + + K M+ + +S G +++C+ + + ++ +
Sbjct: 99 SIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS----LPQGLSIHGYITKL 154
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
D ++N+++ M+ + +D A F + K ++S++ ++ + G + +F
Sbjct: 155 GLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVF 214
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGG 360
+MR + + P+ + F+ +++ C G
Sbjct: 215 NQMRCQCVGPDSIVFVNLISCCKLSG 240
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 218/366 (59%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
+I G+ + G M A LF M E+N +SWSAM++GY G+++AA+E Y + K+ V
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVE 232
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
AM+ GY K G+V A+++F ++ + W +M YV+N A+ ++++K M + VR
Sbjct: 233 TAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVR 292
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+ +++ + C+ L + + + + V + + +LI M+ KCG LD AW+
Sbjct: 293 PNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKL 352
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + KDVIS+++MI+ +A HG ++AL +F KMRN ++P+ +TF+ V+ AC+H G V
Sbjct: 353 FLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFV 412
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
+ G + F+ M + FGI+ H TC++DLLGR+G+L++A SLI + A +G LLG
Sbjct: 413 DLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLG 472
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H N +L E AAR+LL L P LANIYA+ KW V+ M+ E K
Sbjct: 473 ACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKI 532
Query: 483 PGCSWI 488
PG SWI
Sbjct: 533 PGYSWI 538
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 158/312 (50%), Gaps = 17/312 (5%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-CGNMKAAKEFYDRMTEKN 178
L I + + ++ A+ +F+ M+ R ++W+ M++GY G +K A E +D++ E +
Sbjct: 76 LNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPD 135
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
SV++ M+ Y + V A F+++ D + W + + QNG + A +++ VM +
Sbjct: 136 SVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPE 195
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+N V+ IS + GD+E A L K+V ++ V A++ + K G ++L
Sbjct: 196 KN----GVSWSAMISGYVEHGDLEAAEELYKNVGM----KSVVVETAMLTGYMKFGKVEL 247
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A R F R+ K++++++SMI + ++ ++++ L +F M + PN ++ VL CS+
Sbjct: 248 AERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSN 307
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG---RSGQLEKAHSLIMDYKDFCDAG 415
+ G + +L+++ PL++ T L+ + G L+ A L ++ D
Sbjct: 308 LSALPLGRQMHQLVSK----SPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPR-KDVI 362
Query: 416 TWGALLGACKVH 427
+W A++ H
Sbjct: 363 SWNAMISGYAQH 374
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 26/166 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++F ++ K W S+I +V + + ++ M V + + SSVL C+
Sbjct: 248 AERIFQRM-AVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L ++I Y K G +D A +LF M ++VISW+A
Sbjct: 307 NLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNA 366
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEV 195
M++GYA G + A +D+M + + +T+VA+I G V
Sbjct: 367 MISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFV 412
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 253/468 (54%), Gaps = 27/468 (5%)
Query: 15 QLKQVHSYLLKTLTK----PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
+LKQ+H++LLKT + P + F + SYA+ +F + +
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAF--------NSSFSYAKLIFQLLDASEVTH- 80
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-VICGYT- 128
W + +R+ +I L+ ++ + +T S VL AC+R+ + ++ GY
Sbjct: 81 WNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVE 140
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K+GL + N+ + +V YA CG + A++ +D+M +++ +TW MIA
Sbjct: 141 KLGL------------QSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
K G+ A K+F E+ E + W +M Y Q G +K AI+++ M + +EV +
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V + AC +G++ + + + ++ V N LI M+ KCG L+ A R F ++
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEE 308
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+ V+S+S+MI A HG++++AL +F KM N G++PN VTFIG+L ACSH G+VE G K
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKY 368
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F MTR +GI P EH CMVDL R+G L++AH IM+ + WGALLG CKVH
Sbjct: 369 FASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK 428
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
N +L E A RHL +L P G +L+NIYA G+W+D V+ ++ +
Sbjct: 429 NVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRD 476
>gi|115476932|ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|215715342|dbj|BAG95093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 251/478 (52%), Gaps = 50/478 (10%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
L+ L G +L AR +FD +P + W S+I + H + +A+ R V
Sbjct: 53 LLTALWRAGRDLPAARSLFDDMPS-RNVISWNSIIAGCLAHGDLAAASAYFARAPRRNVA 111
Query: 101 TSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
+ A++ G ++G M+DA+ LFD M ERNV+S++ MV G A
Sbjct: 112 S------------------WNAMLAGLVRLGSMEDARSLFDQMPERNVVSYTTMVDGLAR 153
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGY-----------------------------GK 191
CG + +A+E +D M +N V+W AMI+GY G
Sbjct: 154 CGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEKNVVACTAMITGY 213
Query: 192 C--GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
C G+++ A+++FD I D W A+ YV NG + A ++Y +M +E ++ + ++
Sbjct: 214 CKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIMLREGIKPDQATLI 273
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
++AC+ L + V + + + + NAL+ M+SKCG +D + F +K++
Sbjct: 274 ALLTACSSLALLRQGRSTHAVVIKAMLESSISICNALMTMYSKCGNVDESELVFMSLKSQ 333
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
D++S++++I A+A HG+ Q+ + +F +M G+ PN +TF+ +L+AC H G V++ K F
Sbjct: 334 DIVSWNTIIAAYAQHGRYQKVIALFHEMELCGLIPNDITFLSMLSACGHAGRVDESLKLF 393
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
+LM + I P EH C+VD+L R+GQLEKA S I + + WG LL A + H N
Sbjct: 394 DLMFSKYAISPRAEHYACIVDILSRAGQLEKACSYIKEMPSEAEKNVWGTLLCASQTHGN 453
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+LGE+AA+ L+ E +G +L+NIYA+ G W + V+ + E KK PG SW
Sbjct: 454 VQLGELAAKMLVLSDFESSGAYVMLSNIYAAAGMWGEVNRVRSQMKEKGVKKQPGHSW 511
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 157/333 (47%), Gaps = 36/333 (10%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG-NMKAAKEFYDRMTEKNSVTW 182
I + G + A+R+FD+M R+ +SW+A++ G ++ AA+ +D M +N ++W
Sbjct: 23 ITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISW 82
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
++IAG G++ A F + + W AM V+ G + A ++ M + NV
Sbjct: 83 NSIIAGCLAHGDLAAASAYFARAPRRNVASWNAMLAGLVRLGSMEDARSLFDQMPERNV- 141
Query: 243 ISEVAMVGAISACTQLGD-------------VEMAAILAKHVD-----------EGCCDR 278
+S MV ++ C ++ V AA+++ +VD E ++
Sbjct: 142 VSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMPEK 201
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
A+I + K G L A R F I+ KDVIS++++I+ + +G +EA +++ M
Sbjct: 202 NVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGLGEEATKLYIIML 261
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH----LTCMVDLLGR 394
EGI+P+Q T I +LTACS L+ G T IK + E ++ + +
Sbjct: 262 REGIKPDQATLIALLTACSSLALLRQGRS-----THAVVIKAMLESSISICNALMTMYSK 316
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
G ++++ + M K D +W ++ A H
Sbjct: 317 CGNVDESELVFMSLKS-QDIVSWNTIIAAYAQH 348
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 253/473 (53%), Gaps = 23/473 (4%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
QVH +L+KT T + Q + L + L +ARQVFD++P+ + + S+I
Sbjct: 149 QVHGFLIKTGT----WSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQ-RDSVSYNSMIDG 203
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT-KIGLMDDA 136
++ + G++ S ++ R ++I GY + ++ A
Sbjct: 204 YL----------------KCGLVESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNVA 247
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
+LFD M E+++ISW++M+ GY G ++ AK +D M ++ VTW MI GYGK G V
Sbjct: 248 AKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVH 307
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISAC 255
EAK +FD++ D + +M VQN Y A+E++ M +E ++ E ++V +SA
Sbjct: 308 EAKTLFDQMPHRDVVVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAX 367
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + A + ++ E + + ALI M+SKCG + A R F I++K + ++
Sbjct: 368 AQLGRLSKAIDMHLYIVEKQFPSSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWN 427
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI A HG + A DM L++ I+P+ +TF+GVL ACSH GLV++G FELM R
Sbjct: 428 AMIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRK 487
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
I+P +H CMVD+L RSG +E A +LI + W L AC H E GE+
Sbjct: 488 HKIEPRLQHYGCMVDILARSGSIELAKNLIEGMPIEPNDVIWRTFLTACSHHKEFETGEL 547
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL+ + LL+N+YAS G WKD V+ M+ E +K PGCSWI
Sbjct: 548 VAKHLILQAGYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWI 600
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%)
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
D W + + + A+ + +M + V + + + A+ AC++LG V+ +
Sbjct: 92 DPFLWNVVIKSHSHGVDPRKALFLLCLMLENGVPVDKFSFSLALKACSRLGFVKEGTQVH 151
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
+ + ++ N LI ++ KCG L A + F R+ +D +SY+SMI + G +
Sbjct: 152 GFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMPQRDSVSYNSMIDGYLKCGLVE 211
Query: 329 EALDMFLKMRNE 340
A ++F M E
Sbjct: 212 SAGELFGLMPRE 223
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 278/536 (51%), Gaps = 57/536 (10%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ +SKT +Q+ Q+H+ L+ T + A L+ + N++YA VF QI +
Sbjct: 17 LLQKSKTSSQILQIHAQLITTNLISDT---FAASRLLDSVVSKTLNVNYAELVFAQIHQP 73
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---- 121
+ F+ ++++ + + +++ YA+M R G+L +T+ VL AC + LLE
Sbjct: 74 NS-FICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLV 132
Query: 122 ------------------------------------------------AVICGYTKIGLM 133
+++ GY G M
Sbjct: 133 QGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEM 192
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYAN-CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
++AQ +FD M ER+V+SWS M+ GY G + A+ F+D M ++ V+W +MI GY K
Sbjct: 193 ENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKV 252
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
GE+ A+++FD++ + + W+ M Y Q+ +K A+ +++ M + ++ V++VGA+
Sbjct: 253 GEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAV 312
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
SAC+QLG ++ + ++ V AL+ M+ KCG D A R F+ + ++V+
Sbjct: 313 SACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVV 372
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++ MI +G +EAL+ F +M E I + + F+GVL ACSH LV +G F M
Sbjct: 373 SWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQM 432
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
V+ ++P EH C+VDLLGR+GQL++ ++I +A WG+LL AC++H N L
Sbjct: 433 KGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTL 492
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EI L EL + +G L++NIYA +G W+ ++ ++ E + KK G S I
Sbjct: 493 AEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVI 548
>gi|115474919|ref|NP_001061056.1| Os08g0162200 [Oryza sativa Japonica Group]
gi|28564637|dbj|BAC57819.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623025|dbj|BAF22970.1| Os08g0162200 [Oryza sativa Japonica Group]
gi|125602282|gb|EAZ41607.1| hypothetical protein OsJ_26139 [Oryza sativa Japonica Group]
gi|215741371|dbj|BAG97866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 535
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 223/372 (59%), Gaps = 3/372 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+++ G K G +D A LFD M ERN SW+A++ GY G++ A+E +++M +++V+
Sbjct: 163 SMVAGLAKAGHLDAAIELFDKMPERNAASWNAVMCGYIAQGDLAQARELFEQMPVRSNVS 222
Query: 182 WVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W+ MI+GY G+V A ++F+ + ++ D W AM CY +NG A+ A+ ++ M + +
Sbjct: 223 WITMISGYANSGDVHAAGELFERMENKKDLYAWNAMIACYAKNGCAREALAVFNRMLKPH 282
Query: 241 VRI--SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
V + +E ISAC+QLGD+ + + +++ AL+ +H+K G +D
Sbjct: 283 VWVMPNEKTFSSVISACSQLGDLRFGLWAESFMGSVGIELDDHLRTALVDLHTKSGRIDR 342
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A+ F + +DV+SYS++I +GK EA+ +F +M + I PN VTF+G+L+A S+
Sbjct: 343 AFDLFRGLGMRDVVSYSAIIVGCGMNGKFNEAVSLFKEMSDAKISPNAVTFVGLLSAYSN 402
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL+E+ F MT + I P EH T MVDLLGRSG+L++A+ LIM DA WG
Sbjct: 403 AGLMEEARACFASMTEKYKISPSMEHYTIMVDLLGRSGKLDEAYQLIMQMPMKPDASIWG 462
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALL AC++H N ELGEI A EL P ++G LL NIY+ KW+ + ++ +++E
Sbjct: 463 ALLLACRLHNNVELGEIVASKCFELEPGESGYYILLGNIYSEANKWEKVKRLRKIMAERG 522
Query: 479 KKKSPGCSWISS 490
K PG SW+ +
Sbjct: 523 LNKMPGSSWVQA 534
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 280/546 (51%), Gaps = 77/546 (14%)
Query: 8 PRSKTFNQLKQVHS-YLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
P +KT L+Q+H+ + + ++ KP+ H +Q + + +Y+ +F I
Sbjct: 32 PSTKT---LQQIHTQFTIHSIHKPN---HLLSQ------SISLKDFTYSTLIFSHITPHP 79
Query: 67 TQFLWTSLIRNHVLHAH-FRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI- 124
+ + ++R H + ++ LY +M L + + FTF V ACA + + A +
Sbjct: 80 NDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLA 139
Query: 125 -CGYTKIGLMDD-------------------AQRLFDSMAERNVISWSAMVAGYANCGNM 164
C K+GL +D A+++FD + E++++SW+++++GYA G
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFA 199
Query: 165 KAAKEFYDRMTEK----------------------------------------NSVTWVA 184
+ A E + R+ E+ NS A
Sbjct: 200 REAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSA 259
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ Y KCGE+ ++++FD + D W A Y QNG A AI ++ M++ V +
Sbjct: 260 LISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPN 319
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+V + +SAC +G +++ + ++ +V+ ALI M++KCG L+ A R F+
Sbjct: 320 KVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFN 379
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG--IEPNQVTFIGVLTACSHGGLV 362
+ K+ S+++MI+A A HGK++EAL +F +M +EG PN +TF+ +L+AC H GLV
Sbjct: 380 DMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLV 439
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
++G + F++M+ +FG+ P EH +CMVDLL R+G L +A +I + D T GAL
Sbjct: 440 DEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHS 499
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC+ N ++GE + LLEL P +GN + + IY ++ W D+ ++ ++ E K+
Sbjct: 500 ACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKT 559
Query: 483 PGCSWI 488
PGCSWI
Sbjct: 560 PGCSWI 565
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 206/343 (60%), Gaps = 1/343 (0%)
Query: 145 ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
+R+ ++++ Y CG++ AA++ +D M EK+ ++W +++ Y + G++R A++VF
Sbjct: 174 DRHRFVENSLIGAYVACGDVGAARKVFDEMVEKDVISWTSIVVAYTRSGDMRSAEEVFGR 233
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
D W AM Y QN A+E++ M + + I EV++ GAISAC QLG + A
Sbjct: 234 CPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRA 293
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
A + + + V + L+ M++KCG +D A + F ++ K+V +YSSMI A H
Sbjct: 294 AWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASH 353
Query: 325 GKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
G++ EA+ +F +M N +EPN VTFIGVLTACSH G+V +G F M +GI P +
Sbjct: 354 GRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSAD 413
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
H CMVDLLGR+G +++A L+ G WGALLGAC++H +E+ ++ A HL +L
Sbjct: 414 HYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLGACRIHGKSEIAKVVAEHLFKL 473
Query: 444 GPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
PE GN LL+NI AS GKW++ V++++ + KK P S
Sbjct: 474 EPESIGNYVLLSNILASAGKWEEVSKVRILMRKQRLKKDPAVS 516
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 118/252 (46%), Gaps = 35/252 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ A +VF + P K WT+++ + +A +++ ++ +M LG++ + + +
Sbjct: 223 DMRSAEEVFGRCP-VKDMVAWTAMVTGYAQNAMPVKALEVFDRMAELGMVIDEVSLTGAI 281
Query: 111 NACARVPSLLEA---------------VICG------YTKIGLMDDAQRLFDSMAERNVI 149
+ACA++ +L A V+ G Y K GL+D+A ++F M E+NV
Sbjct: 282 SACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLIDEASKVFYGMQEKNVY 341
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM-----TEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
++S+M+AG A+ G A + M E N VT++ ++ G V E + F +
Sbjct: 342 TYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTACSHAGMVGEGRYYFAQ 401
Query: 205 ISE-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+ + P A +A M + G A+++ + M A++G AC G
Sbjct: 402 MKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGVWGALLG---ACRIHG 458
Query: 260 DVEMAAILAKHV 271
E+A ++A+H+
Sbjct: 459 KSEIAKVVAEHL 470
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 159/513 (30%), Positives = 273/513 (53%), Gaps = 63/513 (12%)
Query: 2 TSKYLVP---RSKTFNQLKQVH-SYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQ 57
Y +P R K+ N+ K+++ S ++ L++ F ++ +++ YA +
Sbjct: 9 VENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKI-----EDMDYATR 63
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSVLNACARV 116
+F+Q+ FL+ S+IR + ++ + I +Y ++ R L FTF + +CA +
Sbjct: 64 LFNQVSNPNV-FLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL 122
Query: 117 PSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
S A+I Y K + DA ++FD M ER+VISW++++
Sbjct: 123 GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLL 182
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
+GYA G MK AK + M +K V+W AMI+GY G
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIG---------------------- 220
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
CYV+ A++ ++ M+ + E++++ + +C QLG +E+ + + +
Sbjct: 221 ---CYVE------AMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRG 271
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
+ V NALI M+SKCG + A + F +++ KDVIS+S+MI+ +A HG + A++ F
Sbjct: 272 FLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFN 331
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRS 395
+M+ ++PN +TF+G+L+ACSH G+ ++G + F++M + + I+P EH C++D+L R+
Sbjct: 332 EMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARA 391
Query: 396 GQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLA 455
G+LE+A + D+ WG+LL +C+ N ++ +A HL+EL PE GN LLA
Sbjct: 392 GKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLA 451
Query: 456 NIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
NIYA +GKW+D ++ MI KK+PG S I
Sbjct: 452 NIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 245/442 (55%), Gaps = 19/442 (4%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
+ + + A Q F +P+ T W ++I V + ++ L+ +M R V++ +T
Sbjct: 48 IEDERIDEAWQYFQAMPQRNTAS-WNAMISGLVRYDRVEEASRLFEEMPRRNVIS--YT- 103
Query: 107 SSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
A++ GY KIG ++ A+ LF+ M ++NV+SW+ M++GY G
Sbjct: 104 ---------------AMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDE 148
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A+ +++M +KN V AMI GY K G+ +AK +FD+I D + W AM Y QNG
Sbjct: 149 AENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSG 208
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A++++ M + ++ ++ ++AC+ L ++ V + + + NAL
Sbjct: 209 EEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNAL 268
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+ KCG + + F +I + DV+S+++MI AFA HG AL F +MR+ +EP+
Sbjct: 269 ITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDG 328
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TF+ +L+AC H G V + F M + I P EH C+VD+L R GQ+EKA+ +I
Sbjct: 329 ITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQ 388
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ D G WGALL AC VH+N +LGE+AA+ ++EL P+ +G +L+NIYA+ G W +
Sbjct: 389 EMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGE 448
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
V+ ++ E KK P SW+
Sbjct: 449 VTRVRGLMREQGVKKQPAYSWM 470
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 154/306 (50%), Gaps = 10/306 (3%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I GY K G D+++RLF M +NV+SW++M+AG + A +++ M ++N+ +
Sbjct: 11 SIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTAS 70
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W AMI+G + V EA ++F+E+ + + AM Y + G + A ++ M Q+NV
Sbjct: 71 WNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNV 130
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
V+ IS + G + A L E D+ A+I + K G D A
Sbjct: 131 ----VSWTVMISGYVENGKFDEAENLF----EQMPDKNIVAMTAMITGYCKEGKTDKAKI 182
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F +I +D+ S+++MIT +A +G +EAL + +M G++P+ T I VLTACS
Sbjct: 183 LFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLAS 242
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+++G K L+ + G + ++ + + G + + L D D +W A++
Sbjct: 243 LQEGRKTHVLVLKS-GYESRISICNALITMYCKCGSILDSE-LAFRQIDHPDVVSWNAMI 300
Query: 422 GACKVH 427
A H
Sbjct: 301 AAFARH 306
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 242/435 (55%), Gaps = 37/435 (8%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A Q+FD+IP+ T F + ++ +V + +F ++ + +M F ++ N
Sbjct: 112 AHQLFDEIPEPDT-FSYNIMLSCYVRNGNFEKAQSFFNRM--------PFKDAASWNT-- 160
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+I GY + G M+ A+ LF SM E+N +SW+AM++GY CG+++ A F+
Sbjct: 161 --------MITGYARRGEMEKARVLFYSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAA 212
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ V W AMI GY K +V A+ +F +++ + + W AM YV+N + ++++
Sbjct: 213 PFRGVVAWTAMITGYMKAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M +E +R + + A+ C++L A L + + + I M+ KC
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELS----ALCLGRQIHQ-------------IVMYCKC 315
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L AW+ F +K KDV+++++MI+ +A HG +++AL +F +MR+ +P+ +TF+ VL
Sbjct: 316 GELGDAWKLFEAMKKKDVVAWNAMISGYAQHGNAEKALCLFHEMRDSKTKPDWITFVAVL 375
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC+H GLV+ G F+ M R + ++P +H TCMVDLLGR+G++E+A LI
Sbjct: 376 LACNHAGLVDIGMTYFDSMVRDYRVEPRPDHYTCMVDLLGRAGKVEEALKLIRSMPFRPH 435
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
A +G LLGAC+VH N EL E AA LLEL P LANIYAS W+D V+
Sbjct: 436 AAVFGTLLGACRVHKNVELAEFAAEKLLELDPRNAAGYVQLANIYASKNLWEDVARVRKR 495
Query: 474 ISETEKKKSPGCSWI 488
+ E+ K PG SWI
Sbjct: 496 MKESNVVKVPGYSWI 510
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 34/307 (11%)
Query: 145 ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK-CGEVREAKKVFD 203
E + + ++A G++ A + M KN+V+W +++ G K + EA ++FD
Sbjct: 58 EDQIFPLNKIIATRVRSGDIDGALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFD 117
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
EI EPD + M CYV+NG + A + M ++ + I+ + G++E
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFKDA----ASWNTMITGYARRGEMEK 173
Query: 264 AAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
A +L + E N VS NA+I + +CG L+ A F + V+++++MIT +
Sbjct: 174 ARVLFYSMME-----KNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYM 228
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
K + A MF M ++ N VT+ +++ EDG K F M GI+P +
Sbjct: 229 KAKKVELAEAMFKDM---TVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE-GIRPNS 284
Query: 383 EHLTCMV----DL----LGRS----------GQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
L+ + +L LGR G+L A L K D W A++
Sbjct: 285 SGLSSALLGCSELSALCLGRQIHQIVMYCKCGELGDAWKLFEAMKK-KDVVAWNAMISGY 343
Query: 425 KVHVNAE 431
H NAE
Sbjct: 344 AQHGNAE 350
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 176/572 (30%), Positives = 267/572 (46%), Gaps = 107/572 (18%)
Query: 12 TFNQLKQV---HSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
TF +LKQ S KT P Q+ Q P ++L DQ TQ
Sbjct: 17 TFQKLKQPIPPPSTFTKTPQNPSPQHQNKHQKHPSFT--PNNHL-----CLDQ-----TQ 64
Query: 69 FLWTSLIRNHVLHA----------HFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
L + R H HA H R ++ Y M +L + F SVL AC+++
Sbjct: 65 QLHAHITRTHFNHAQQVSFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISV 124
Query: 119 ---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS----- 152
++ A++ Y++ G + A+ LFD M+ER+V+SWS
Sbjct: 125 ARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRA 184
Query: 153 -----------------AMVAGYANCGNMKAAKEFYDRMTEKN----SVTWVAMIAG--- 188
AM+AGY C +++ + + RM E+N +T +++I
Sbjct: 185 YITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGF 244
Query: 189 --------------------------------YGKCGEVREAKKVFDEISEPDASCWAAM 216
YGKCGE+R A+ +FD + D W AM
Sbjct: 245 VGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAM 304
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y Q A +++ MR VR +E+ MV +S C G ++M ++D+
Sbjct: 305 ISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGV 364
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+ + ALI M++KCG + A R FS ++D+ +++ M+ + HG ++AL +F +
Sbjct: 365 EVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTE 424
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M G++PN +TFIG L ACSH GLV +G FE M FG+ P EH CMVDLLGR+G
Sbjct: 425 METLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAG 484
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L++A+ +I + WGA+L ACK+H N+ +GE+AAR LL L P+ G L++N
Sbjct: 485 LLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSN 544
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
IYA+ +W D ++ + +T KK PG S I
Sbjct: 545 IYAAANRWNDVAGMRKAVKDTGIKKEPGMSSI 576
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 218/366 (59%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
+I G+ + G M A LF M E+N +SWSAM++GY G+++AA+E Y + K+ V
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVE 232
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
AM+ GY K G+V A+++F ++ + W +M YV+N A+ ++++K M + VR
Sbjct: 233 TAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVR 292
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+ +++ + C+ L + + + + V + + +LI M+ KCG LD AW+
Sbjct: 293 PNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKL 352
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + KDVI++++MI+ +A HG ++AL +F KMRN ++P+ +TF+ V+ AC+H G V
Sbjct: 353 FLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFV 412
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
+ G + F+ M + FGI+ H TC++DLLGR+G+L++A SLI + A +G LLG
Sbjct: 413 DLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLG 472
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H N +L E AAR+LL L P LANIYA+ KW V+ M+ E K
Sbjct: 473 ACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKI 532
Query: 483 PGCSWI 488
PG SWI
Sbjct: 533 PGYSWI 538
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 159/312 (50%), Gaps = 17/312 (5%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-CGNMKAAKEFYDRMTEKN 178
L I + + ++ A+ +F+ M+ R ++W+ M++GY G +K A E +D++ E +
Sbjct: 76 LNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPD 135
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
SV++ M+ Y + V+ A F+++ D + W + + QNG + A +++ VM +
Sbjct: 136 SVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPE 195
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+N V+ IS + GD+E A L K+V ++ V A++ + K G ++L
Sbjct: 196 KN----GVSWSAMISGYVEHGDLEAAEELYKNVGM----KSVVVETAMLTGYMKFGKVEL 247
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A R F R+ K++++++SMI + ++ ++++ L +F M + PN ++ VL CS+
Sbjct: 248 AERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSN 307
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG---RSGQLEKAHSLIMDYKDFCDAG 415
+ G + +L+++ PL++ T L+ + G L+ A L ++ D
Sbjct: 308 LSALPLGRQMHQLVSK----SPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPR-KDVI 362
Query: 416 TWGALLGACKVH 427
TW A++ H
Sbjct: 363 TWNAMISGYAQH 374
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 26/166 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++F ++ K W S+I +V + + ++ M V + + SSVL C+
Sbjct: 248 AERIFQRM-AVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCS 306
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L ++I Y K G +D A +LF M ++VI+W+A
Sbjct: 307 NLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNA 366
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEV 195
M++GYA G + A +D+M + + +T+VA+I G V
Sbjct: 367 MISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFV 412
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 174/579 (30%), Positives = 284/579 (49%), Gaps = 98/579 (16%)
Query: 4 KYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLP-GDNLSYARQVFDQI 62
+ L+ R + ++L Q+H++L+ H +Q L LP G + YARQ+FD+I
Sbjct: 16 RELLRRCGSVHRLNQLHAHLVV-----HGVDDVTSQILASYCALPAGGGVWYARQLFDRI 70
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---- 118
P +F++ SLIR + ++++ L M R G+L + FT +L ACARV +
Sbjct: 71 PD-PDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHV 129
Query: 119 -----------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
+ A++ Y G + D++R FD M +RNV+SW++M+ GYA
Sbjct: 130 MVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQA 189
Query: 162 GNMKAAKEFYDRMTEK----NSVTWV---------------------------------- 183
GN + A ++ M + + T V
Sbjct: 190 GNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILA 249
Query: 184 -AMIAGYGKCGE-------------------------------VREAKKVFDEISEPDAS 211
A++ YGKCG+ + A+ F++I E
Sbjct: 250 NALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSII 309
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W AM CYVQ G A+++Y M+ + E + +SAC QLGD+ ++ +
Sbjct: 310 SWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCI 369
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+ + + N+L+ M+++CG +D A FS + +K+VIS++++I A A HG++Q+AL
Sbjct: 370 RDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDAL 429
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
F M ++ P+++TF+ +L+AC+HGGL+E G F+ M V+ +KP EH CMVDL
Sbjct: 430 MFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDL 489
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
LGR GQL KA LI D D WGALLGAC++H + ++G+ + LLEL G
Sbjct: 490 LGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLF 549
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
L++N+ +W+D + ++ ++ E KK+ G S I +
Sbjct: 550 VLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIET 588
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 280/546 (51%), Gaps = 77/546 (14%)
Query: 8 PRSKTFNQLKQVHS-YLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
P +KT L+Q+H+ + + ++ KP+ H +Q + + +Y+ +F I
Sbjct: 32 PSTKT---LQQIHTQFTIHSIHKPN---HLLSQ------SISLKDFTYSTLIFSHITPHP 79
Query: 67 TQFLWTSLIRNHVLHAH-FRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI- 124
+ + ++R H + ++ LY +M L + + FTF V ACA + + A +
Sbjct: 80 NDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLA 139
Query: 125 -CGYTKIGLMDD-------------------AQRLFDSMAERNVISWSAMVAGYANCGNM 164
C K+GL +D A+++FD + E++++SW+++++GYA G
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFA 199
Query: 165 KAAKEFYDRMTEK----------------------------------------NSVTWVA 184
+ A E + R+ E+ NS A
Sbjct: 200 REAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSA 259
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ Y KCGE+ ++++FD + D W A Y QNG A AI ++ M++ V +
Sbjct: 260 LISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPN 319
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+V + +SAC +G +++ + ++ +V+ ALI M++KCG L+ A R F+
Sbjct: 320 KVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFN 379
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG--IEPNQVTFIGVLTACSHGGLV 362
+ K+ S+++MI+A A HGK++EAL +F +M +EG PN +TF+ +L+AC H GLV
Sbjct: 380 DMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLV 439
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
++G + F++M+ +FG+ P EH +CMVDLL R+G L +A +I + D T GAL
Sbjct: 440 DEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHS 499
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC+ N ++GE + LLEL P +GN + + IY ++ W D+ ++ ++ E K+
Sbjct: 500 ACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKT 559
Query: 483 PGCSWI 488
PGCSWI
Sbjct: 560 PGCSWI 565
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 260/473 (54%), Gaps = 21/473 (4%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H L+K + + LI + GD + +ARQVFD++P + + S+I
Sbjct: 145 KQIHGLLMKLEIGSN---LFLLNCLIAMYLRCGD-IEFARQVFDRMP-IQDSVSYNSMID 199
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+V + L+ M + +++S+L A+ IGL A
Sbjct: 200 GYVKSGTIDLARELFDSMPLED--KNLISWNSMLGGFAQTKD----------GIGL---A 244
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
LF+ M ER+++SW+ ++ G+A CG ++ A ++RM +++ ++W MI GY K G+++
Sbjct: 245 LELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIK 304
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAISAC 255
A+ +FDE+ + D + + Y QNGY A+E++ M RQ N+ E +V A+SA
Sbjct: 305 VARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAI 364
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
+QLG VE AA + + E T V+ ALI M+SKCG ++ A F + K + ++
Sbjct: 365 SQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWN 424
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI+ A +G + A M L+M ++P+ +TFIGVL AC+H GLV++G FELM +V
Sbjct: 425 AMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKV 484
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
++P +H CMVD+LG++G +E A I + + W LL AC+ H N +GE+
Sbjct: 485 HKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGEL 544
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL+ + + + LL+NIYA +G W + V+MM+ + K PGCSWI
Sbjct: 545 IAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWI 597
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 235/435 (54%), Gaps = 13/435 (2%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD++ + W +I + +AH+ + LY +M G +VL+ACA
Sbjct: 170 ARFLFDKMSH-RDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACA 228
Query: 115 RVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
+L I + K D+ R+ + +++V YANCG M A+E YD+
Sbjct: 229 HAGNLSYGKAIHQFIK----DNGFRVGSHIQ-------TSLVNMYANCGAMHLAREVYDQ 277
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ K+ V AM++GY K G V++A+ +FD + E D CW+AM Y ++ A++++
Sbjct: 278 LPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLF 337
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M++ + ++ M+ ISAC +G + A + + D+ RT ++NALI M++KC
Sbjct: 338 NEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKC 397
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L A F + K+VIS+SSMI AFA HG + A+ +F +M+ + IEPN VTFIGVL
Sbjct: 398 GNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVL 457
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
ACSH GLVE+G K F M I P EH CMVDL R+ L KA LI +
Sbjct: 458 YACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPN 517
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WG+L+ AC+ H ELGE AA LLEL P+ G +L+NIYA +W D +V+ +
Sbjct: 518 VIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKL 577
Query: 474 ISETEKKKSPGCSWI 488
+ K CS I
Sbjct: 578 MKHKGVSKEKACSRI 592
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 197/441 (44%), Gaps = 33/441 (7%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN-LSYARQVFD 60
+ K L+ KT +KQ+H+ +L++ + L P + L YA +F
Sbjct: 14 SEKGLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFS 73
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL- 119
IP T+F L+R ++ LY + R G F+F +L A +++ +L
Sbjct: 74 HIPNPPTRF-SNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALN 132
Query: 120 LEAVICGY-TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
L I G +K G + SA++A YA CG + A+ +D+M+ ++
Sbjct: 133 LGLEIHGLASKFGFF-----------HADPFIQSALIAMYAACGRIMDARFLFDKMSHRD 181
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
VTW MI GY + K+++E+ +EPDA + G +++
Sbjct: 182 VVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQ 241
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
++ R+ ++ G A LA+ V + + VS A++ ++K G
Sbjct: 242 FIKDNGFRVGSHIQTSLVNMYANCG----AMHLAREVYDQLPSKHMVVSTAMLSGYAKLG 297
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A F R+ KD++ +S+MI+ +A+ + EAL +F +M+ I P+Q+T + V++
Sbjct: 298 MVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVIS 357
Query: 355 ACSH-GGLVEDGCKQFELMTRVFG-IKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKD 410
AC++ G LV+ FG P+ ++D+ + G L KA + M K+
Sbjct: 358 ACANVGALVQAKWIHTYADKNGFGRTLPIN---NALIDMYAKCGNLVKAREVFENMPRKN 414
Query: 411 FCDAGTWGALLGACKVHVNAE 431
+W +++ A +H +A+
Sbjct: 415 VI---SWSSMINAFAMHGDAD 432
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 255/477 (53%), Gaps = 16/477 (3%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
+LKQ+H+ +LKT D Y + D L YA+ VFD + T FLW +
Sbjct: 29 ELKQIHARMLKTGLM-QDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT-FLWNLM 86
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICGYTKIGL 132
IR +S+LLY +M + +TF S+L AC+ + + E + TK+G
Sbjct: 87 IRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGY 146
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
E +V + ++++ YA GN K A +DR+ E + V+W ++I GY K
Sbjct: 147 ------------ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G++ A +F +++E +A W M YVQ K A++++ M+ +V V++ A+
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
SAC QLG +E + ++++ + + LI M++KCG ++ A F IK K V
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 314
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+++++I+ +A HG +EA+ F++M+ GI+PN +TF VLTACS+ GLVE+G F M
Sbjct: 315 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
R + +KP EH C+VDLLGR+G L++A I + +A WGALL AC++H N EL
Sbjct: 375 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
GE L+ + P G ANI+A KW + + ++ E K PGCS IS
Sbjct: 435 GEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 491
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 238/441 (53%), Gaps = 23/441 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +ARQ+FD++P+ + + S+I +V + L+ M R
Sbjct: 176 LGFARQIFDRMPQ-RDSVSFNSMIDGYVKRGLIESARELFDLMPR--------------- 219
Query: 112 ACARVPSLL--EAVICGYTKIGL-MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
V +L+ ++I GY + +D A LF M E+++ISW++M+ GY G ++ AK
Sbjct: 220 ---EVKNLISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAK 276
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+ +D M ++ VTW MI GY K G V +AK +FD++ D + +M YVQN Y
Sbjct: 277 DLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHME 336
Query: 229 AIEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A+E++ M +E+ + E +V +SA QLG + A + ++ E + ALI
Sbjct: 337 ALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALI 396
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+SKCG + A F I+NK + +++MI A HG + A DM L++ I+P+ +
Sbjct: 397 DMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDI 456
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+GVL ACSH GLV++G FELM R I+P +H CMVD+L RSG +E A +LI +
Sbjct: 457 TFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQE 516
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
+ W L AC H E GE+ +HL+ + LL+N+YAS GKWKD
Sbjct: 517 MPIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSNMYASFGKWKDV 576
Query: 468 EIVKMMISETEKKKSPGCSWI 488
++ M+ E + +K PGCSWI
Sbjct: 577 RRIRTMMKERKIEKIPGCSWI 597
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 213/460 (46%), Gaps = 56/460 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT-LTKPHDQYHYYAQFLIRLLQLPGDNLS-YARQVFDQIP 63
L+ R KT + ++H+ L+ T L K + + ++ P L+ +AR VF +
Sbjct: 21 LLGRCKTSEDVSKIHARLITTGLIK---NSNLSTRIVLAFAASPRPYLAEFARLVFREYH 77
Query: 64 KCKTQ--------FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR 115
C + FLW ++I++H +Q++LL+ M GV F+ S VL AC+R
Sbjct: 78 VCSSSPGGEVEDPFLWNAVIKSHSHGKDPKQALLLFCLMLENGVSVDKFSMSLVLKACSR 137
Query: 116 VPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
+ G+ K GL L + ++ + ++ Y CG + A++ +DRM
Sbjct: 138 L---------GFVKGGLQIHGI-LRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIFDRMP 187
Query: 176 EKNSVTWVAMIAGYGKCGEVREAKKVFDEISE--PDASCWAAMTVCYVQNGYA-KAAIEM 232
+++SV++ +MI GY K G + A+++FD + + W ++ Y Q A +
Sbjct: 188 QRDSVSFNSMIDGYVKRGLIESARELFDLMPREVKNLISWNSIISGYAQTSDGVDIASNL 247
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M ++++ IS +M+ ++ D AK + + R +I ++K
Sbjct: 248 FAEMPEKDL-ISWNSMIDGYVKHGRIED-------AKDLFDAMPRRDVVTWATMIDGYAK 299
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIG 351
G++ A F ++ ++DV+SY+SM+ + + EAL++F M E + P++ T +
Sbjct: 300 LGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVI 359
Query: 352 VLTACSHGGLVEDGC--------KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
VL+A + G + KQF L ++ G+ ++D+ + G ++ A
Sbjct: 360 VLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKL-GV--------ALIDMYSKCGSIQHA-M 409
Query: 404 LIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
L+ + + W A++G +H LGE A LL++
Sbjct: 410 LVFEGIENKSIDHWNAMIGGLAIH---GLGESAFDMLLQI 446
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/579 (30%), Positives = 283/579 (48%), Gaps = 98/579 (16%)
Query: 4 KYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLP-GDNLSYARQVFDQI 62
+ L+ R + ++L Q+H++L+ H +Q L LP G + YARQ+FD+I
Sbjct: 16 RELLRRCGSVHRLNQLHAHLVV-----HGVDDVTSQILASYCALPAGGGVWYARQLFDRI 70
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---- 118
P +F++ SLIR + ++++ L M R G+L + FT +L ACARV +
Sbjct: 71 PD-PDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHV 129
Query: 119 -----------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
+ A++ Y G + D++R FD M +RNV+SW++M+ GYA
Sbjct: 130 MVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQA 189
Query: 162 GNMKAAKEFYDRMTEK----NSVTWV---------------------------------- 183
GN + A ++ M + + T V
Sbjct: 190 GNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILA 249
Query: 184 -AMIAGYGKCGE-------------------------------VREAKKVFDEISEPDAS 211
A++ YGKCG+ + A+ F++I E
Sbjct: 250 NALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSII 309
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W AM CYVQ G A+++Y M+ + E + +SAC QLGD+ ++ +
Sbjct: 310 SWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCI 369
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+ + + N+L+ M+++CG +D A FS + +K+VIS++++I A A HG++Q+AL
Sbjct: 370 RDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDAL 429
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
F M + P+++TF+ +L+AC+HGGL+E G F+ M V+ +KP EH CMVDL
Sbjct: 430 MFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDL 489
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
LGR GQL KA LI D D WGALLGAC++H + ++G+ + LLEL G
Sbjct: 490 LGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLF 549
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
L++N+ +W+D + ++ ++ E KK+ G S I +
Sbjct: 550 VLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIET 588
>gi|297729191|ref|NP_001176959.1| Os12g0490100 [Oryza sativa Japonica Group]
gi|255670316|dbj|BAH95687.1| Os12g0490100 [Oryza sativa Japonica Group]
Length = 451
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 228/413 (55%), Gaps = 22/413 (5%)
Query: 98 GVLTSGFTFSSVLNACARVPSLLE----------------------AVICGYTKIGLMDD 135
G + FT +SV+ C++V ++ E A++ Y IGL+ D
Sbjct: 5 GPRPNAFTVTSVIKCCSKVRAVHEGLQVHAFLAKAGLGCSSVHVGAALLDLYGNIGLVGD 64
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A+R+FD M +NV+ + MVA G+M AA+E +D M E++ ++W +++GY G+
Sbjct: 65 ARRVFDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGMAERDPISWNTLMSGYLHLGDT 124
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
+++FDE++ + + W M + G ++++ MR M +SAC
Sbjct: 125 ATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRMRATGFEPDAATMAVLMSAC 184
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + +A + + + C + +V N+LI M++KCG + A F+ KD +SY+
Sbjct: 185 AQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETYPKDTVSYN 244
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
MI AFA HG +++ALD+F M + G++P+ VTF+GVL+AC+H GLVE G FELM
Sbjct: 245 VMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSACAHAGLVEYGKNYFELMKTT 304
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
+ ++ +H C+VDL GR+G +E+AH + AG WGALL AC+ H + ++GEI
Sbjct: 305 YAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHAGVWGALLNACRKHCHVDVGEI 364
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA+ L+ + P+ GN LL N A +W E V++ + K+ GCSW+
Sbjct: 365 AAKELIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQLSMRRKVIDKTAGCSWV 417
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 272/506 (53%), Gaps = 42/506 (8%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
L K+ LKQ+HS +KT + P Q + R GD + YARQ+FD IP
Sbjct: 20 LFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREF---GD-MCYARQLFDTIP 75
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV---------LTSGFTFSSVLNA-- 112
+ + F W + + + A + + LY +M V L GFT S L
Sbjct: 76 E-PSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGR 134
Query: 113 ---CARVPSLLE-------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
C V L+ A+I Y+ GL+D A+ +FD + +V++W+AM++GY
Sbjct: 135 ELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGY---- 190
Query: 163 NMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
+R+ +K+ ++W A++ G+ G+V A+K F ++ E D W AM Y++
Sbjct: 191 ---------NRI-KKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLR 240
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
K A+ +++ M+ ++ E MV ++AC QLG +E+ + ++D+ +V
Sbjct: 241 LNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFV 300
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
NALI M+ KCG +++A F+ + +D ++++M+ A +G +EAL+MF +M +
Sbjct: 301 GNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASV 360
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
P++VT++GVL+AC+H G+V++G K F MT GI+P H CMVDLLG++G L++AH
Sbjct: 361 TPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAH 420
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
+I + ++ WGALLGAC++H +AE+ E A +LEL P L NIYA+
Sbjct: 421 EIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACN 480
Query: 463 KWKDSEIVKMMISETEKKKSPGCSWI 488
KW ++ ++ + KK+PGCS I
Sbjct: 481 KWDKLRELRQVMMDRGIKKTPGCSLI 506
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 257/487 (52%), Gaps = 26/487 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFDQIPKCKT 67
K +QVH + ++ PH + L+ + + P D AR+VFD +P+ +
Sbjct: 165 KDLRTGEQVHGLVARS---PHADDVHIGTALVDMYAKCERPVD----ARRVFDAMPE-RN 216
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGY 127
W SLI + + ++++L+ +M G T SSV++ACA + + E G
Sbjct: 217 VVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAERE----GR 272
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
M RL D M N A+V YA CG A+ +D M ++ V+ +++A
Sbjct: 273 QVHAHMVKRDRLRDDMVLNN-----ALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILA 327
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
GY K V +A+ VF ++ E + W + Y QNG + AI ++ ++++++ +
Sbjct: 328 GYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYT 387
Query: 248 MVGAISACTQLGDVEMAAILAKHV-DEGC-----CDRTNYVSNALIHMHSKCGYLDLAWR 301
++AC + +++ HV EG + +V N+L+ M+ K G +D +
Sbjct: 388 YGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 447
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F R+ +D +S+++MI +A +G++++AL +F +M P+ VT IGVL+AC H GL
Sbjct: 448 VFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGL 507
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + F MT GI P +H TCMVDLLGR+G L++A LI D D+ W +LL
Sbjct: 508 VDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLL 567
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC++H N ELGE A L EL PE +G LL+N+YA MGKW D V+ + + K
Sbjct: 568 GACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSK 627
Query: 482 SPGCSWI 488
PGCSWI
Sbjct: 628 QPGCSWI 634
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
+ +V+ YA G ++ A+ +D + +N+ ++ A+++ Y + G EA+ +F+ I +PD
Sbjct: 56 NTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQC 115
Query: 212 CWAAMTVCYVQNG--YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
+ A+ ++G +A A+ M ++ ++ + A+SAC D+ +
Sbjct: 116 SYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHG 175
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
V ++ AL+ M++KC A R F + ++V+S++S+IT + +G E
Sbjct: 176 LVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGE 235
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACS 357
AL +F++M G P++VT V++AC+
Sbjct: 236 ALVLFVEMMATGFFPDEVTLSSVMSACA 263
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 223/406 (54%), Gaps = 38/406 (9%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
L+ +I Y K L++DA +LFD M +RNVISW+ M++ Y+ C + A E M N
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 179 SVTWV------------------------------------AMIAGYGKCGEVREAKKVF 202
V A+I + K GE +A VF
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
DE+ DA W ++ + QN + A+E++K M++ + + + ACT L +E
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
+ + HV D+ ++NAL+ M+ KCG L+ A R F+++K +DVI++S+MI+ A
Sbjct: 278 LG--MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
+G SQEAL +F +M++ G +PN +T +GVL ACSH GL+EDG F M +++GI P+
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
EH CM+DLLG++G+L+ A L+ + + DA TW LLGAC+V N L E AA+ ++
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 443 LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L PE G LL+NIYA+ KW E ++ + + KK PGCSWI
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 182/442 (41%), Gaps = 101/442 (22%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ A Q+FDQ+P+ + WT++I + ++++ L M R V + +T+SSVL
Sbjct: 112 LNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 112 ACARVPSL-----------LE-------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+C + + LE A+I + K+G +DA +FD M + I W++
Sbjct: 171 SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 154 MVAGYANCGNMKAAKEFYDRM------TEKNSVTWV------------------------ 183
++ G+A A E + RM E+ ++T V
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 290
Query: 184 -------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
A++ Y KCG + +A +VF+++ E D W+ M QNGY++ A+++++ M
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE-GCCDRTNYVSNALIHMHSKCGY 295
+ + + + +VG + AC+ G +E + + + D +I + K G
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGK 410
Query: 296 LD---------------LAWREF---SRIKN-----------------KDVISYSSMITA 320
LD + WR R++ +D +Y+ +
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNI 470
Query: 321 FADHGKSQEALDMFLKMRNEG---------IEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+A+ K ++ +MR+ G IE N+ ++ SH +VE K +L
Sbjct: 471 YANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Query: 372 MTRVFGIKPLTEHLTCMVDLLG 393
+ R+ GI + E + DL G
Sbjct: 531 IHRLTGIGYVPETNFVLQDLEG 552
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 68/275 (24%)
Query: 48 PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS 107
P D LS VFD++ +W S+I ++ ++ L+ +M R G + T +
Sbjct: 210 PEDALS----VFDEMVTGDA-IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 108 SVLNACARVPSLLE--------------------AVICGYTKIGLMDDAQRLFDSMAERN 147
SVL AC + +LLE A++ Y K G ++DA R+F+ M ER+
Sbjct: 265 SVLRACTGL-ALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVA------------------- 184
VI+WS M++G A G + A + ++RM T+ N +T V
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 185 -----------------MIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMT-VCYVQNGY 225
MI GK G++ +A K+ +E+ EPDA W + C VQ
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
A KV+ + ++ I A +Q D
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD 478
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 21/151 (13%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
++ N LI+M+ K L+ A + F ++ ++VIS+++MI+A++ Q+AL++ + M +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 341 GIEPNQVTFIGVLTACS--------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+ PN T+ VL +C+ H G++++G + ++ R + ++D+
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLES-DVFVR-----------SALIDVF 204
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ G+ E A S + D DA W +++G
Sbjct: 205 AKLGEPEDALS-VFDEMVTGDAIVWNSIIGG 234
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/514 (32%), Positives = 276/514 (53%), Gaps = 42/514 (8%)
Query: 9 RSKTFNQLKQVHSYLL--KTLTKPH--DQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
R ++ Q+KQVH+ ++ L+ P + + + +R ++AR VFD+IP
Sbjct: 17 RCRSLRQIKQVHALMVLRGFLSDPSALRELIFASSVGVR------GGTAHARLVFDRIPH 70
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL------GVLTSGFTFSSVLNACARVPS 118
+F++ +LIR R ++ +YA+M R GV TF VL ACA + +
Sbjct: 71 -PDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGA 129
Query: 119 ---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
+ A+I + G + A LFD A + ++WSAM++G
Sbjct: 130 SETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISG 189
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
+A G++ AA+E +D K+ V+W MI Y K G++ A+++FD + D W AM
Sbjct: 190 FARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMI 249
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
YV+ G K A+E+++ M+ + V M+ +SAC GD++ L + + G
Sbjct: 250 SGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFL-SGRFS 308
Query: 278 R---TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
R + + NALI M++KCG + A F +++K+V +++S+I A HG EA+D+F
Sbjct: 309 RIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVF 368
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
KM ++P+++TF+ VL ACSHGG+V+ G + F LM + + I+P +H CMVD+L R
Sbjct: 369 QKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSR 428
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+G L++A I K + W LLGAC++H EL E A + LL+ + +G+ LL
Sbjct: 429 AGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGDFVLL 488
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+NIYAS+G+W SE ++ ++ ++ K GC+ +
Sbjct: 489 SNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVV 522
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 223/406 (54%), Gaps = 38/406 (9%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
L+ +I Y K L++DA +LFD M +RNVISW+ M++ Y+ C + A E M N
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 179 SVTWV------------------------------------AMIAGYGKCGEVREAKKVF 202
V A+I + K GE +A VF
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF 217
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
DE+ DA W ++ + QN + A+E++K M++ + + + ACT L +E
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
+ + HV D+ ++NAL+ M+ KCG L+ A R F+++K +DVI++S+MI+ A
Sbjct: 278 LG--MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
+G SQEAL +F +M++ G +PN +T +GVL ACSH GL+EDG F M +++GI P+
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
EH CM+DLLG++G+L+ A L+ + + DA TW LLGAC+V N L E AA+ ++
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 443 LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L PE G LL+NIYA+ KW E ++ + + KK PGCSWI
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 182/442 (41%), Gaps = 101/442 (22%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ A Q+FDQ+P+ + WT++I + ++++ L M R V + +T+SSVL
Sbjct: 112 LNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 112 ACARVPSL-----------LE-------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+C + + LE A+I + K+G +DA +FD M + I W++
Sbjct: 171 SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 154 MVAGYANCGNMKAAKEFYDRM------TEKNSVTWV------------------------ 183
++ G+A A E + RM E+ ++T V
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 290
Query: 184 -------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
A++ Y KCG + +A +VF+++ E D W+ M QNGY++ A+++++ M
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE-GCCDRTNYVSNALIHMHSKCGY 295
+ + + + +VG + AC+ G +E + + + D +I + K G
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGK 410
Query: 296 LD---------------LAWREF---SRIKN-----------------KDVISYSSMITA 320
LD + WR R++ +D +Y+ +
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNI 470
Query: 321 FADHGKSQEALDMFLKMRNEG---------IEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+A+ K ++ +MR+ G IE N+ ++ SH +VE K +L
Sbjct: 471 YANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Query: 372 MTRVFGIKPLTEHLTCMVDLLG 393
+ R+ GI + E + DL G
Sbjct: 531 IHRLTGIGYVPETNFVLQDLEG 552
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 68/275 (24%)
Query: 48 PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS 107
P D LS VFD++ +W S+I ++ ++ L+ +M R G + T +
Sbjct: 210 PEDALS----VFDEMVT-GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 264
Query: 108 SVLNACARVPSLLE--------------------AVICGYTKIGLMDDAQRLFDSMAERN 147
SVL AC + +LLE A++ Y K G ++DA R+F+ M ER+
Sbjct: 265 SVLRACTGL-ALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVA------------------- 184
VI+WS M++G A G + A + ++RM T+ N +T V
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 185 -----------------MIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMT-VCYVQNGY 225
MI GK G++ +A K+ +E+ EPDA W + C VQ
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
A KV+ + ++ I A +Q D
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD 478
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 21/151 (13%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
++ N LI+M+ K L+ A + F ++ ++VIS+++MI+A++ Q+AL++ + M +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 341 GIEPNQVTFIGVLTACS--------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+ PN T+ VL +C+ H G++++G + ++ R + ++D+
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLES-DVFVR-----------SALIDVF 204
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ G+ E A S + D DA W +++G
Sbjct: 205 AKLGEPEDALS-VFDEMVTGDAIVWNSIIGG 234
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/439 (34%), Positives = 242/439 (55%), Gaps = 19/439 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +ARQVFD++ + + + S+I +V + G++ S ++
Sbjct: 174 LGFARQVFDRMSQ-RDSVSYNSMIDGYV----------------KCGLIESARELFDLMP 216
Query: 112 ACARVPSLLEAVICGYT-KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+ + ++I GY + +D A LFD M E+++ISW++++ GY G ++ AK+
Sbjct: 217 SEKKNLISWNSMINGYAQRADGVDIASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDL 276
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D+M ++ VTW M+ GY K G V +AK +FD++ + D + +M YVQN Y AI
Sbjct: 277 FDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMMAGYVQNRYHMEAI 336
Query: 231 EMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+++ M +E ++ E +V +SA QLG + A + + E + ALI M
Sbjct: 337 DIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKFLLGGKLGVALIDM 396
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+SKCG + A F RI+NK + +++MI A HG + A DM L++ I+P+ +TF
Sbjct: 397 YSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITF 456
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL ACSH GLV++G FELM R I+P +H CMVD+L RSG++E A +LI +
Sbjct: 457 VGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHYGCMVDILSRSGRIELAKNLIEEMP 516
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+ W L AC H E GE+ A+HL+ + LL+N+YAS+G WK+
Sbjct: 517 IEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASLGMWKEVRR 576
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ M+ E + +K PGCSWI
Sbjct: 577 VRTMMKERKIQKIPGCSWI 595
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 187/389 (48%), Gaps = 47/389 (12%)
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
FLW ++I++H R+++LL+ M + GV F+ S VL AC+R+ G+
Sbjct: 89 FLWNAVIKSHSHGVEPRKALLLFFLMLKNGVSVDKFSLSLVLKACSRL---------GFV 139
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K G M L + ++ + ++ Y CG + A++ +DRM++++SV++ +MI G
Sbjct: 140 KEG-MQXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDG 198
Query: 189 YGKCGEVREAKKVFDEISEPDAS--CWAAMTVCYVQNGYAKAA--IEMYKVMRQENVRIS 244
Y KCG + A+++FD + + W +M NGYA+ A +++ + E
Sbjct: 199 YVKCGLIESARELFDLMPSEKKNLISWNSMI-----NGYAQRADGVDIASNLFDEMPEKD 253
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA-LIHMHSKCGYLDLAWREF 303
++ I + G +E A L + R + V+ A ++ ++K G++ A F
Sbjct: 254 LISWNSLIDGYVKHGRIEDAKDLFDKM-----PRRDVVTWATMVDGYAKLGFVHQAKSLF 308
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLV 362
++ +DV++Y+SM+ + + EA+D+F M E + P++ T + VL+A + G +
Sbjct: 309 DQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRL 368
Query: 363 EDGC--------KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
K+F L+ G+ ++D+ + G +++A + + +
Sbjct: 369 SKAMDMHLYTVEKKF-LLGGKLGV--------ALIDMYSKCGSIQQAMG-VFERIENKSI 418
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLEL 443
W A++G +H LGE A LL++
Sbjct: 419 DHWNAMIGGLAIH---GLGESAFDMLLQI 444
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 111/242 (45%), Gaps = 17/242 (7%)
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
D W A+ + + A+ ++ +M + V + + ++ + AC++LG V+
Sbjct: 87 DPFLWNAVIKSHSHGVEPRKALLLFFLMLKNGVSVDKFSLSLVLKACSRLGFVKEGMQXH 146
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
+ + ++ N LI ++ KCG L A + F R+ +D +SY+SMI + G +
Sbjct: 147 GFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIE 206
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT-- 386
A ++F M +E + N +++ ++ + DG ++ + +F P + ++
Sbjct: 207 SARELFDLMPSE--KKNLISWNSMINGYAQRA---DGV---DIASNLFDEMPEKDLISWN 258
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI-AARHLLELGP 445
++D + G++E A L D D TW ++ A+LG + A+ L + P
Sbjct: 259 SLIDGYVKHGRIEDAKDLF-DKMPRRDVVTWATMVDGY-----AKLGFVHQAKSLFDQMP 312
Query: 446 EK 447
++
Sbjct: 313 QR 314
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 274/534 (51%), Gaps = 65/534 (12%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
Q +++H YL+K +D + A L+ + G L A VFD+I K W ++
Sbjct: 129 QGRKIHGYLIKL---GYDSDAFSANALVDMYAKVG-ILEDASSVFDEIAKPDI-VSWNAI 183
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV----------PSLLE--- 121
I VLH + +++ L +M++ G+ + FT SS L ACA + SL++
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243
Query: 122 --------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA-NCGNMKAAKEF-- 170
+I Y+K MDDA+ +F M ER++I+W+A+++G++ N + +AA F
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303
Query: 171 -------YDRMTEKNSVTWVA-----------------------------MIAGYGKCGE 194
+++ T + +A +I YGKCG
Sbjct: 304 MHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGH 363
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V +A +VF+E D + ++ Y Q+G + A+ +Y M+ ++ ++A
Sbjct: 364 VEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNA 423
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C L E + H+ + + N+L++M++KCG ++ A FSRI + ++S+
Sbjct: 424 CASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSW 483
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
S+MI A HG +EAL +F +M G+ PN +T + VL AC+H GLV + F M
Sbjct: 484 SAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKI 543
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+FGI+P+ EH CM+DLLGR+G+LE A L+ +A WGALLGA ++H N +LGE
Sbjct: 544 LFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGE 603
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA LL L PEK+G LLANIYAS+G W V+ ++ + + KK PG SW+
Sbjct: 604 QAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWL 657
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 203/471 (43%), Gaps = 67/471 (14%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQVH ++ T D + A L+ L G AR +FD IP ++ W +L
Sbjct: 30 KQVHGIVVVT---GFDSDEFVANSLVILYAKCG-GFGDARSLFDAIPD-RSVVSWNALFS 84
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------------- 121
+V +++ L+ M G+ + F+ SS++N C + ++
Sbjct: 85 CYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDS 144
Query: 122 ------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG------------------ 157
A++ Y K+G+++DA +FD +A+ +++SW+A++AG
Sbjct: 145 DAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMN 204
Query: 158 -YANCGNM----------------KAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVR 196
C NM + ++ + + + +S V +I Y KC +
Sbjct: 205 KSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMD 264
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
+A+ VF + E D W A+ + QN + A ++ +M E + ++ + + +
Sbjct: 265 DARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIA 324
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L M + + + NYV N+LI + KCG+++ A R F D++ ++S
Sbjct: 325 ALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTS 384
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
++TA+A G+ +EAL ++L+M++ GI+P+ +L AC+ E G KQ + F
Sbjct: 385 LVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQG-KQVHVHILKF 443
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
G +V++ + G +E A S +W A++G H
Sbjct: 444 GFMSDIFAGNSLVNMYAKCGSIEDA-SCAFSRIPVRGIVSWSAMIGGLAQH 493
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 41/272 (15%)
Query: 94 MHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
MH LG+ + F F SVL AC ++ + ++ G G++
Sbjct: 1 MHLLGIKCNEFAFPSVLKAC----TVTKDLVLGKQVHGIV-------------------- 36
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
+V G+ + + +++ Y KCG +A+ +FD I + W
Sbjct: 37 VVTGF-----------------DSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSW 79
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
A+ CYV + A+ ++ M +R +E ++ I+ CT L D + ++ +
Sbjct: 80 NALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIK 139
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
D + +NAL+ M++K G L+ A F I D++S++++I H AL++
Sbjct: 140 LGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALEL 199
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+M G+ PN T L AC+ L E G
Sbjct: 200 LREMNKSGMCPNMFTLSSALKACAGMALRELG 231
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 236 MRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
M ++ +E A + ACT D+ + + V D +V+N+L+ +++KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
A F I ++ V+S++++ + + EA+ +F M GI PN+ + ++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 356 CSHGGLVEDGCKQFELMTRVFGIKPLTEHLT--CMVDLLGRSGQLEKAHSLIMDYKDFCD 413
C+ GL ED + ++ + + ++ + +VD+ + G LE A S + D D
Sbjct: 121 CT--GL-EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASS-VFDEIAKPD 176
Query: 414 AGTWGALLGACKVH 427
+W A++ C +H
Sbjct: 177 IVSWNAIIAGCVLH 190
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 233/427 (54%), Gaps = 9/427 (2%)
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
+ +C T W +LI H F +S + M R G + T+ SVL+AC +
Sbjct: 81 VGECDTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGT---R 137
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
V+ G G + + L D E +A+V YA C +M +A + +D M ++ V+
Sbjct: 138 DVLLGMQVHGRVVGSGVLPDLRVE------NALVDMYAECADMGSAWKVFDGMQVRSVVS 191
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W ++++G + G+V EA+ +FD + E D W AM YV + A+EM++ M+ NV
Sbjct: 192 WTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNV 251
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
E MV I+AC QLG +EM + ++ +V NALI M+SKCG ++ A
Sbjct: 252 SADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALD 311
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F + ++D +++++I A +G +EA++MF +M P++VTFIGVLTAC+H GL
Sbjct: 312 VFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGL 371
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V+ G + F M + I P H C++DLLGR+G++ +A I ++ WG LL
Sbjct: 372 VDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLL 431
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
AC+VH N+E+GE+ A LLEL PE + LL+NIYA +W+D ++ I E KK
Sbjct: 432 AACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKK 491
Query: 482 SPGCSWI 488
PGCS I
Sbjct: 492 EPGCSLI 498
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 262/502 (52%), Gaps = 24/502 (4%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R+K+ +++Q H+++LKT HD + +SYA + ++I +
Sbjct: 18 RAKSLLEIQQAHAFMLKT-GLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRI-ESPNG 75
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA------ 122
F S+IR + + ++ ++ +M V ++F+ VL ACA E
Sbjct: 76 FTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 135
Query: 123 ---------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
+I Y + G + A+++ D M R+ +SW+++++ Y + G ++ A
Sbjct: 136 FMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEEA 195
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+ +D M E+N +W MI+GY G V+EA++VFD + D W AM Y G
Sbjct: 196 RALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYN 255
Query: 228 AAIEMYKVMRQENV-RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+E++ +M ++ R +V +SAC LG + + ++D+ + +V+ AL
Sbjct: 256 EVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATAL 315
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M+SKCG +D A F +DV +++S+IT + HG ++AL++F +M EG +PN
Sbjct: 316 VDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNG 375
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TFIGVL+AC+H GL++ K FE+M V+GI+P EH CMVDLLGR G+ E+A L+
Sbjct: 376 ITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVN 435
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ + +LLGACK E E A LLE P ++ ++N+YAS G+W +
Sbjct: 436 EVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDE 495
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
+ V+ + KK+PGCS I
Sbjct: 496 AMEVRGKMRAERVKKNPGCSMI 517
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 250/473 (52%), Gaps = 23/473 (4%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+H +L KT Y Q + L + L YARQVFD++P+ + + S+I
Sbjct: 142 QIHGFLRKTGI----WSDLYLQNCLIGLYIKCGCLGYARQVFDRMPR-RDSVSYNSMIDG 196
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT-KIGLMDDA 136
+V + G++ S ++ + +I GY + ++ A
Sbjct: 197 YV----------------KCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVA 240
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
++LFD M E+++ISW++++ GY G M+ AK +++M +++ VTW M+ GY K G V
Sbjct: 241 KKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVH 300
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISAC 255
+AK +FD + D + +M YVQN Y K AI ++ M +E ++ E +V +SA
Sbjct: 301 QAKSLFDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAI 360
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + A + ++ + + ALI +SKCG + + R F I+NK + ++
Sbjct: 361 AQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWN 420
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI A HG + A DM L++ I+P+ +TFIGVL ACSH GLV++G FELM R
Sbjct: 421 AMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRK 480
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
I+P +H CMVD+L RSG +E A +LI + + W L AC H E GE+
Sbjct: 481 HKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGEL 540
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL G + LL+N+YAS G WK+ V+ + E + +K PGCSWI
Sbjct: 541 VAKHLFLQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWI 593
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 256/439 (58%), Gaps = 15/439 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQ-SILLYAKMHRLGVLTSGFTFSSVL 110
L ARQVFD + + WTSLI V A F++ +++L+ +M + V + FT ++VL
Sbjct: 297 LESARQVFDGLTE-HNAVSWTSLI-GGVAQAGFQEEALVLFNQMREVPVASDQFTLATVL 354
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
C + IG A + + + +V +A+V YA CG++ A
Sbjct: 355 GVCLSQKDI---------SIGEQLHAHTITRGL-DSSVPVANALVTMYAKCGDVWKANHA 404
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++ M ++ ++W AMI + + G+V +A++ FD++ E + W +M Y+Q GY + +
Sbjct: 405 FELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGL 464
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHM 289
++Y M +E V+ + +ISAC L + + ILA+ G + V+N+++ M
Sbjct: 465 KVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVS-VANSVVTM 523
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+S+CG ++ A + FS I K+++S+++M+ +A +G+ ++ +++F KM N G P+Q+++
Sbjct: 524 YSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISY 583
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ VL+ CSH G V +G F MT+ GI P++EH CMVDLLGR+GQLE+A +LI
Sbjct: 584 VSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMP 643
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+A WGALL AC++H N +L E+A ++LLEL E G+ LLANIY+ GK +
Sbjct: 644 FKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTN 703
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ ++ + +K+PGCSWI
Sbjct: 704 VRKLMRDKGVRKNPGCSWI 722
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 169/336 (50%), Gaps = 42/336 (12%)
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
L+A++ +G+ +S F + +LN Y+ GL+ DA R+F + NV
Sbjct: 26 LHAQLIFMGLKSSIFLQNHLLNM--------------YSNCGLISDAYRVFGGIMFPNVY 71
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
SW+ M++G+A+ G M+ A++ +++M E++SV+W +M++GY GE+ K +
Sbjct: 72 SWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSL---- 127
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
GY K A++++ + + I + + G ++ A+
Sbjct: 128 --------------GYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMD----FAQ 169
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
V + + + N++I+ +SK G + A F+++ +D +S+++MI+ + HG E
Sbjct: 170 KVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAE 229
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP-LTEHLTC- 387
L+ FL+M N+G PN +T+ VL+AC+ +E G L R+ ++P L + C
Sbjct: 230 TLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGA---HLHARIVRMEPCLDVYAGCG 286
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
++D+ + G+LE A + D +A +W +L+G
Sbjct: 287 LIDMYAKCGRLESARQ-VFDGLTEHNAVSWTSLIGG 321
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 172/399 (43%), Gaps = 67/399 (16%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------------------------ 158
+I G+ G M +A++LF+ M ER+ +SW++M++GY
Sbjct: 76 MISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQ 135
Query: 159 ------------------------ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
CG M A++ + R + W +MI GY K G
Sbjct: 136 LHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGS 195
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V++A ++F ++ E D W M Q+G+ + + M + R + + +SA
Sbjct: 196 VKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSA 255
Query: 255 CTQLGDVEMAAILAKHVD--EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
CT + D+E A L + E C D Y LI M++KCG L+ A + F + + +
Sbjct: 256 CTSIYDLEWGAHLHARIVRMEPCLDV--YAGCGLIDMYAKCGRLESARQVFDGLTEHNAV 313
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++S+I A G +EAL +F +MR + +Q T VL C + G +Q
Sbjct: 314 SWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIG-EQLHAH 372
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKA-HSL-IMDYKDFCDAGTWGALLGACKVHVNA 430
T G+ +V + + G + KA H+ +M +D +W A++ A +
Sbjct: 373 TITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDII---SWTAMITAF-----S 424
Query: 431 ELGEI-AARHLLELGPEKTGNS--ALLANIYASMGKWKD 466
+ G++ AR + PE+ S ++LA Y G W++
Sbjct: 425 QAGDVEKAREYFDKMPERNVISWNSMLAT-YMQRGYWEE 462
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 45/299 (15%)
Query: 117 PSLL--EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG----NMKAAKEF 170
PSL ++I GY+K G + A LF M ER+ +SW+ M++ + G + E
Sbjct: 178 PSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEM 237
Query: 171 YDRMTEKNSVTWVAMIAG-----------------------------------YGKCGEV 195
+++ NS+T+ ++++ Y KCG +
Sbjct: 238 WNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRL 297
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A++VFD ++E +A W ++ Q G+ + A+ ++ MR+ V + + + C
Sbjct: 298 ESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVC 357
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
D+ + L H D + V+NAL+ M++KCG + A F + +D+IS++
Sbjct: 358 LSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWT 417
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+MITAF+ G ++A + F KM E N +++ +L G E+G K + M R
Sbjct: 418 AMITAFSQAGDVEKAREYFDKMP----ERNVISWNSMLATYMQRGYWEEGLKVYIQMLR 472
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/500 (31%), Positives = 276/500 (55%), Gaps = 37/500 (7%)
Query: 5 YLVP---RSKTFNQLKQVHSYLLK-TLTKPHDQYHYYAQFLI-RLLQL--PGDNLSYARQ 57
+ VP K +LK +H++++K +L++ + FL+ +++ + ++L YA
Sbjct: 16 FFVPILQNCKNIVELKSIHAHVIKYSLSQ--------SSFLVTKMVDVCDKTEDLGYASL 67
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL-------GVLTSGFTFSSVL 110
+F Q+ K +L+ ++IR H + + +IL Y +M RL + FTF V+
Sbjct: 68 LFKQV-KEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVI 126
Query: 111 NACARVP--SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
+C+ + +L + V K G + N+ +A++ Y C ++ A
Sbjct: 127 KSCSGLVCYNLGKQVHAHLCKFG------------PKSNITMENALIDMYTKCASLLDAH 174
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+ +D M E+++++W ++I+G+ G++R+A +FD + W AM Y + G
Sbjct: 175 KVFDGMVERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYAD 234
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+ +++ M+ V E++++ + AC QLG +E+ + + D R + NAL+
Sbjct: 235 ALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALME 294
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKCG + A++ F ++ DVIS+S+MI A+HGK++EA+++F +M+ IEPN +T
Sbjct: 295 MYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGIT 354
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+G+L+AC+H G +G F+ M++ + I+P EH C+VD+LGR+G+L +A +I
Sbjct: 355 FLGLLSACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKM 414
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
D+ WG+LL +C+ H N ++ IA HL EL P+ TGN LL+NIYA + KW
Sbjct: 415 PMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVS 474
Query: 469 IVKMMISETEKKKSPGCSWI 488
++ +I KK+PG S I
Sbjct: 475 RMRKLIKSKSMKKTPGSSLI 494
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 248/452 (54%), Gaps = 22/452 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR +FD++P+ + W ++ +V + ++ L+ +M + + +++++++
Sbjct: 251 IADARDLFDRMPE-RNVVAWNVMLDGYVHLSPIEEACKLFDEMP----IKNSISWTTIIS 305
Query: 112 ACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
AR L EA ++ GY + + DDA+R+FD M + + W+ M
Sbjct: 306 GLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWNTM 365
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
++GY CG ++ A + RM K+ V+W MIAGY + G++ +A +F ++ + W
Sbjct: 366 ISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWN 425
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
++ +VQN A+ + +MR+ R + AC L + + L +
Sbjct: 426 SVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRS 485
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
++ NALI ++KCG + A + F + KD++S++++I +A +G+ EA+ +F
Sbjct: 486 GHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVF 545
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
+M G+ P++VTF+G+L+ACSH GL+++G F MT+ + +KP+ EH CMVDLLGR
Sbjct: 546 REMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGR 605
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+G+L +A L+ + +AG WGALLGAC +H N EL ++AA L EL P K N LL
Sbjct: 606 AGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKASNYVLL 665
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
+NI A GKW +SE + I E K PG +
Sbjct: 666 SNISAEAGKWDESEKARASIKEKGVNKPPGLA 697
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 151/287 (52%), Gaps = 23/287 (8%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A++ + G +D+A+ LFD M RN +SW+AM+A ++ G + A+ +DRM ++ +
Sbjct: 54 AMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFS 113
Query: 182 WVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W M++ Y + G++ A+ V D + + +C+ AM Y +NG A+++ + M +
Sbjct: 114 WTVMVSCYARGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPD 173
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+ V+ A++ TQ G++ A + DE D T++ N ++ + G L+ A
Sbjct: 174 L----VSWNSALAGLTQSGEMVRA---VQFFDEMVKDMTSW--NLMLAGFVRTGDLNAAS 224
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F++I++ +VIS+ +++ + G+ +A D+F +M E N V + +L H
Sbjct: 225 SFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMP----ERNVVAWNVMLDGYVHLS 280
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQLEKAHSLI 405
+E+ CK F+ M P+ + T ++ L R+G+L++A L+
Sbjct: 281 PIEEACKLFDEM-------PIKNSISWTTIISGLARAGKLQEAKDLL 320
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 188/419 (44%), Gaps = 59/419 (14%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH------------- 95
G +L AR V D++P K + ++I + + F ++ L +M
Sbjct: 124 GGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAG 183
Query: 96 ----------------------RLGVLTSGFTFSSVLNACARVPSLLEA--------VIC 125
++ +GF + LNA + + +E+ ++
Sbjct: 184 LTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLN 243
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
GY + G + DA+ LFD M ERNV++W+ M+ GY + ++ A + +D M KNS++W +
Sbjct: 244 GYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTI 303
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I+G + G+++EAK + D++S + A+ Y+Q A A ++ M +
Sbjct: 304 ISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDT---- 359
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFS 304
V IS Q G +E A +L + + + VS N +I +++ G + A F
Sbjct: 360 VCWNTMISGYVQCGILEEAMLLFQRMPN-----KDMVSWNTMIAGYAQDGQMHKAIGIFR 414
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
R+ ++ +S++S+I+ F + + +AL F+ MR + T+ L AC++ ++
Sbjct: 415 RMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHV 474
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALL 421
G + L+ R I + ++ + G++ +A + M YKD +W AL+
Sbjct: 475 GRQLHNLLVRSGHIND-SFAGNALISTYAKCGRILEAKQIFDEMVYKDIV---SWNALI 529
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 13/127 (10%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+ SN + ++ G L A R F + ++ ++Y++M++A A HG+ EA +F M
Sbjct: 19 FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR 78
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQL 398
N V++ ++ A S G V D F+ M P+ + T MV R G L
Sbjct: 79 ----NTVSWNAMIAALSDHGRVADARSLFDRM-------PVRDEFSWTVMVSCYARGGDL 127
Query: 399 EKAHSLI 405
E A ++
Sbjct: 128 ELARDVL 134
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 260/447 (58%), Gaps = 28/447 (6%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSV 109
NL AR FD++P+ ++ W +++ + ++I L+ M G V T+ +V
Sbjct: 215 NLKTARMYFDKMPE-RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTV 273
Query: 110 LNACARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAER-NVISWSAMVAGYANCGNMKA 166
+++C+ + P L E+++ ++L D++ R N +A++ +A CGN++A
Sbjct: 274 ISSCSSLGDPCLSESIV------------RKLDDTVGFRPNYFVKTALLDMHAKCGNLEA 321
Query: 167 AKEFYDRM---TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
A + ++++ ++SV W AMI+ Y + G++ A+ +FD++ + D W +M Y QN
Sbjct: 322 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQN 381
Query: 224 GYAKAAIEMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
G + AI++++ M E+ + EV MV SAC LG++ + + E + V
Sbjct: 382 GESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISV 441
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
N+LI M+S+CG + A F + +D++SY+++I+ FA+HG E++++ LKM+ +GI
Sbjct: 442 YNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGI 501
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK-PLTEHLTCMVDLLGRSGQLEKA 401
EP+++T+I +LTACSH GL+ +G + FE IK P +H CM+D+LGR+G+LE+A
Sbjct: 502 EPDRITYIAILTACSHAGLLGEGQRLFE------SIKFPDVDHYACMIDMLGRAGRLEEA 555
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
LI AG +G+LL A +H ELGE+AA L ++ P +GN LL+NIYAS
Sbjct: 556 MKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASA 615
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
G+WKD + V+ + + KK+ G SW+
Sbjct: 616 GRWKDGDKVRDTMRKQGVKKTTGLSWL 642
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 190/413 (46%), Gaps = 61/413 (14%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYA---------- 55
+V + ++L+Q+H+ L+ H Q H+ L + +L + SY
Sbjct: 9 IVSKITNLHRLRQLHAQLVHH--SLHHQNHWVVLLLTQCTRLLAPS-SYTCHIFHAATHP 65
Query: 56 -RQVFDQIPKCKTQF-----LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+VF + K +Q + SL ++ + H + + + Y+ M + S + V
Sbjct: 66 DVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLAHV 125
Query: 110 LNACARVPSLLEAVICG-YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
L + + I G Y K G ++ A++LFD M +R V W+ M++GY CGN + A
Sbjct: 126 LKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEAS 185
Query: 169 EFY----DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
+ D+ +N +TW MI G+ K G ++ A+ FD++ E W AM Y Q G
Sbjct: 186 TLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGG 245
Query: 225 YAKAAIEMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-V 282
+ I ++ M NV+ E V IS+C+ LGD ++ + + +D+ R NY V
Sbjct: 246 APEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFV 305
Query: 283 SNALIHMHSKCGYLDLA-----------------WRE-----------------FSRIKN 308
AL+ MH+KCG L+ A W F ++
Sbjct: 306 KTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQ 365
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTFIGVLTACSHGG 360
+D +S++SMI + +G+S +A+ +F +M +E +P++VT + V +AC H G
Sbjct: 366 RDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLG 418
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
Query: 201 VFDEISEPDASCWAAMTVCYVQNGY-AKAAIEMYK-VMRQENVRISEVAMVGAISACTQL 258
+F + PD + M Y Q G A+ + ++K ++R N++ + S +
Sbjct: 58 IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPN----TSFYSVMMKS 113
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
E LA HV + DR +YV N ++ +++K G ++ A + F + ++ V ++ MI
Sbjct: 114 AGSESMLFLA-HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 172
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+ + G +EA +F M ++ I N +T+ ++T + G ++ F+ M
Sbjct: 173 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKM 226
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/540 (31%), Positives = 271/540 (50%), Gaps = 65/540 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + T LK +H+ +LK+ PH AQ+ ++S+A +F
Sbjct: 10 LIKQCVTLEALKSLHASILKSHLHPHLCTSLIAQYASL------GSISHAYALF-STSHS 62
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC---------ARV 116
FLW +IR H R S+ LY++M +LG+ + FTF +L AC AR
Sbjct: 63 SNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARA 122
Query: 117 PS------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
+ + +++ Y + G D ++++F+ M ERNV+SWS+MV YA+ G
Sbjct: 123 HAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRY 182
Query: 165 KAAKEFYDRMTEK----------NSVTWV--------------------------AMIAG 188
+ + RM + N++ + A +
Sbjct: 183 EEGLLLFWRMLNEGIAPNRGSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGM 242
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y +CG + A++ F I + D W +M YVQ A+E++K M+ + V +
Sbjct: 243 YARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTL 302
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+ I A + L ++A + + + A+I ++ KCG L+ A + F R+
Sbjct: 303 LSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSA 362
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+++IS+S+MI+ + HG +EAL +F +M+ I+P+ + F+ VL+ACSHGGL+ +G +
Sbjct: 363 RNLISWSTMISGYGMHGHGREALCLFDQMK-ASIKPDHIAFVMVLSACSHGGLIAEGWEC 421
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F+ M R FG+ P TEH CMVDLLGR+G+L +A + I DAG WGALLGAC++H
Sbjct: 422 FKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACRIHS 481
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N E E AARHL L E G LL+NIYAS GK K+++ ++ ++ +K+ G + I
Sbjct: 482 NLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTVGHTII 541
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/435 (35%), Positives = 249/435 (57%), Gaps = 29/435 (6%)
Query: 83 HFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS-----------------LLEAVIC 125
H Q + ++A++ R G F +L +C++ + L A+I
Sbjct: 44 HINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALID 103
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-CGN---MKAAKEFYDRMTE----K 177
G+ G DA +L+ M +++ + ++A CG+ ++ +E + R +
Sbjct: 104 GFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSS 163
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISE----PDASCWAAMTVCYVQNGYAKAAIEMY 233
N + + ++ YGKCGE+ +A++VF+E+ E D CW AM +V+N A+E +
Sbjct: 164 NRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAF 223
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M+ ENVR +E +V +SAC+QLG +E+ + ++ + + +V NALI+M+S+C
Sbjct: 224 RGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRC 283
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G +D A F +K++DVI+Y++MI+ + +GKS++A+++F M + P VTF+GVL
Sbjct: 284 GSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVL 343
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
ACSHGGLV+ G K F MTR +G++P EH CMVDLLGR G+LE+A+ LI K D
Sbjct: 344 NACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPD 403
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
G LL ACK+H N ELGE A+ L + G +G LL+++YAS GKWK++ V+
Sbjct: 404 HIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAK 463
Query: 474 ISETEKKKSPGCSWI 488
+ E +K PGCS I
Sbjct: 464 MKEAGMQKEPGCSSI 478
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 136/323 (42%), Gaps = 69/323 (21%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ RSK NQ+ +H+ L++ H Q + L+R + YA ++F Q
Sbjct: 38 LLQRSKHINQVLPIHAQLIRN---GHSQDPFMVFELLRSCS-KCHAIDYASRIF-QYTHN 92
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--- 122
+L+T+LI V ++ +I LY++M +L + +S+L AC +L E
Sbjct: 93 PNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREV 152
Query: 123 ------------------VICGYTKIGLMDDAQRLFDSMAE----RNVISWSAMVAGYAN 160
++ Y K G + DA+R+F+ M E ++ + W+AM+ G+
Sbjct: 153 HSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVR 212
Query: 161 CGNMKAAKEFYDRMTEKNSVT----------------------WV--------------- 183
M A E + M +N WV
Sbjct: 213 NEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFV 272
Query: 184 --AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
A+I Y +CG + EA+ VFDE+ + D + M NG ++ AIE+++VM +
Sbjct: 273 GNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRL 332
Query: 242 RISEVAMVGAISACTQLGDVEMA 264
R + V VG ++AC+ G V+
Sbjct: 333 RPTNVTFVGVLNACSHGGLVDFG 355
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 233/416 (56%), Gaps = 15/416 (3%)
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLM 133
+RN ++H +Y+ R+G + F S+ + ++I GY K G +
Sbjct: 195 FVRNSLIH--------MYSVCGRIGDARAMFEVCSISDLVT-----WNSMIDGYVKNGEI 241
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
A+ LF+ M ER++ SW++M+AGY G+M AA++ +++M ++ V+W MI GY +
Sbjct: 242 GAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQ 301
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
+ A ++F+ + + W M YV+ + M+ M E + +E +V ++
Sbjct: 302 NMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMP-NEATLVSVLT 360
Query: 254 ACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
AC LG ++ + ++ + + +S AL+ M++KCG +DLA F ++ N+ V+
Sbjct: 361 ACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVV 420
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++SMI + HG++ +AL+MFL M G PN TFI VL+AC+H G++ +G F+LM
Sbjct: 421 SWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLM 480
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
R + I+P EH CMVDLLGR+G ++ LI WGALL AC+ H N+EL
Sbjct: 481 RRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSEL 540
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EI A+ L+EL P G LL+NIYA+ GKW D EIV+ M+ E K+ G SW+
Sbjct: 541 AEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWV 596
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY-KVMRQENVRISEVAMVGAIS 253
V+ A +F+ + EPDA + YV A+ Y + M ++ V + +
Sbjct: 108 VQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVK 167
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
C ++G + + + + + +V N+LIHM+S CG + A F D+++
Sbjct: 168 VCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVT 227
Query: 314 YSSMITAFADHGKSQEALDMFLKM 337
++SMI + +G+ A ++F +M
Sbjct: 228 WNSMIDGYVKNGEIGAARELFEEM 251
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ AR VFD++ ++ W S+I + +H +++ ++ M + G + + TF VL+
Sbjct: 404 MDLARDVFDKMSN-RSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLS 462
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
ACA +LE G+ LM A ++ E V + MV G MK +E
Sbjct: 463 ACAHSGMILE----GWWYFDLMRRAYKI-----EPKVEHYGCMVDLLGRAGLMKDLEELI 513
Query: 172 DRMT-EKNSVTWVAMIAG 188
+M E + W A+++
Sbjct: 514 RKMPMEGGTALWGALLSA 531
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/443 (35%), Positives = 233/443 (52%), Gaps = 22/443 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +VF IP+ + W S+I V +++ L+ +M V +G T VL+
Sbjct: 187 LGLGYRVFVNIPR-RDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLS 245
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS-----AMVAGYANCGNMKA 166
ACA+ + R S ERN I S AM+ Y CG+++
Sbjct: 246 ACAKKSDF---------------EFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVED 290
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
AK +D+M EK+ V+W M+ GY K GE A+ +FD + D + W A+ Y Q G
Sbjct: 291 AKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKP 350
Query: 227 KAAIEMYKVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
K A+E++ ++ + + EV +V +SAC QLG +++ + ++ + +++ +
Sbjct: 351 KEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTS 410
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
LI M+ KCG L A F ++ KDV +S+MI A HG ++A+ +F KM+ + ++PN
Sbjct: 411 LIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPN 470
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
VTF +L ACSH GLVE+G F M V+G+ P +H CMVD+LGR+G LE+A LI
Sbjct: 471 AVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELI 530
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
A WGALLGAC +H N L E A L+EL P G LL+NIYA GKW
Sbjct: 531 EKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWD 590
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
++ ++ + KK PGCS I
Sbjct: 591 RVSGLRKLMRDVGLKKEPGCSSI 613
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/534 (30%), Positives = 272/534 (50%), Gaps = 67/534 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H ++LK K D+ + L+ L+ + YAR VFD++ + + W+++IR
Sbjct: 114 KEIHGFVLK---KGLDRDVFVGNALM-LMYGECACVEYARLVFDKMME-RDVVSWSTMIR 168
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----------------- 119
+ + F ++ L +M+ + V S S++N A ++
Sbjct: 169 SLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNE 228
Query: 120 ------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
A++ Y K G + A++LF+ + ++ V+SW+AM+AG ++ + + R
Sbjct: 229 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIR 288
Query: 174 MTEKN----SVTWVAMIAG-----------------------------------YGKCGE 194
M E+N +T +++I YGKC +
Sbjct: 289 MQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSD 348
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+R A+ +FD D W AM Y Q A ++ MR VR ++V +V +S
Sbjct: 349 IRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSL 408
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C G +++ + ++D+ + ++ AL+ M++KCG ++ A R F ++D+ +
Sbjct: 409 CAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMW 468
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+++IT FA HG +EALD+F +M +G++PN +TFIG+L ACSH GLV +G K FE M
Sbjct: 469 NAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVH 528
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
FG+ P EH CMVDLLGR+G L++AH +I + WGAL+ AC++H N +LGE
Sbjct: 529 TFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGE 588
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+AA LLE+ PE G + L++NIYA+ +W D+ V+ + KK PG S I
Sbjct: 589 LAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 642
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 80/178 (44%), Gaps = 10/178 (5%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ AC Q+ ++ + V + DR +V NAL+ M+ +C ++ A F ++ +DV
Sbjct: 101 LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDV 160
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S+S+MI + + + + AL++ +M + P++V + ++ + + G
Sbjct: 161 VSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAY 220
Query: 372 MTRVFGIKPLTEHL-----TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
+ R EH+ T ++D+ + G L A L +W A++ C
Sbjct: 221 VIR----NSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVV-SWTAMIAGC 273
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 169/577 (29%), Positives = 284/577 (49%), Gaps = 97/577 (16%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFL-IRLLQLPGDNLSYARQVFDQIPK 64
L+ KT L+ +H+ ++KT H+ + ++ + +L D L+YA VFD I +
Sbjct: 8 LLHNCKTLQSLRIIHAKMIKT--GLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--- 121
+W ++ R H L + ++ LY M LG++ + +TF +L ACA+ + E
Sbjct: 66 -PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQ 124
Query: 122 -------------------------------------------------AVICGYTKIGL 132
A+I GY G
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGY 184
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN-------------- 178
+ AQ++FD + ++V+SW+A+++GYA GN K A E + M + N
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA 244
Query: 179 -----SV-------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCW 213
S+ +W+ A+I Y KCGEV A +F+ +S D W
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISW 304
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+ Y K A+ +++ M + +EV M+ + AC LG +++ + ++D+
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDK 364
Query: 274 GCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+N S +LI M++KCG ++ A + F + N+ + S+++MI FA HG++ A
Sbjct: 365 RLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAF 424
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
D+F +MR +GIEP+ +TF+G+L+ACSH G+++ G F MT + I P EH CM+DL
Sbjct: 425 DIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDL 484
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
LG SG ++A +I + D W +LL ACK+H N ELGE A++L+++ P+ +G+
Sbjct: 485 LGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSY 544
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYA+ G+W + + ++++ KK PGCS I
Sbjct: 545 VLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSI 581
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 167/555 (30%), Positives = 283/555 (50%), Gaps = 84/555 (15%)
Query: 5 YLVPRSKTFNQLKQVHSYLL--KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQI 62
+L + + L+QVH+ ++ ++ P++ L + + L N +YA +F I
Sbjct: 23 FLAKQCSSSKTLQQVHAQMVVKSSIHSPNNH------LLSKAIHL--KNFTYASLLFSHI 74
Query: 63 PKCKTQFLWTSLIR--NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV---- 116
+ + +IR H H+ ++ L+ +M L + + FTF +CA +
Sbjct: 75 APHPNDYAFNIMIRALTTTWH-HYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLS 133
Query: 117 -----------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
P ++I Y++ G + A+++FD + R+++SW++M+AGYA
Sbjct: 134 PARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYA 193
Query: 160 NCGNMKAAKEFYDRMTEK----------------------------------------NS 179
G + A E + M + NS
Sbjct: 194 KAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNS 253
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
A+I+ Y KCG++ A+++FD ++ D W A+ Y QNG A AI ++ M+++
Sbjct: 254 YIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKED 313
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR----TNYVSNALIHMHSKCGY 295
V +++ + +SAC +G ++ L K +DE R +V+ ALI M++KCG
Sbjct: 314 CVTENKITLTAVLSACATIGALD----LGKQIDEYASQRGFQHDIFVATALIDMYAKCGS 369
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG--IEPNQVTFIGVL 353
L A R F + K+ S+++MI+A A HGK++EAL +F M +EG PN +TF+G+L
Sbjct: 370 LASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLL 429
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
+AC H GLV +G + F++M+ +FG+ P EH +CMVDLL R+G L +A LI + D
Sbjct: 430 SACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPD 489
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
T GALLGAC+ N ++GE R +LE+ P +GN + + IYA++ W+DS ++++
Sbjct: 490 KVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLL 549
Query: 474 ISETEKKKSPGCSWI 488
+ + K+PGCSWI
Sbjct: 550 MRQKGITKTPGCSWI 564
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 231/419 (55%), Gaps = 10/419 (2%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
+W +LI H F S + M R + + T+ SVL+AC + LL
Sbjct: 128 MWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLG------- 180
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
M +R+ +S + +A+V YA CG+M AA ++ M ++ +W ++I+G
Sbjct: 181 ---MQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGL 237
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
+ G+V A+ +FD + E D W AM YVQ G + A+E ++ M+ VR E MV
Sbjct: 238 VRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMV 297
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
++AC QLG +E ++ +V NALI M+SKCG ++ A F + N+
Sbjct: 298 SVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNR 357
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
D +++++I A +G+ +EA+DMF +M P++VTF+GVLTAC+H GLV+ G + F
Sbjct: 358 DKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFF 417
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
MT + I P H C++D+LGR+G+L++A I ++ WG LL +C+V+ N
Sbjct: 418 LSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGN 477
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+E+GE+AA LLEL P+ + LL+N+YA +WKD ++ +I E KK PGCS I
Sbjct: 478 SEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMI 536
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 241/442 (54%), Gaps = 22/442 (4%)
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV--PSLLEAV--- 123
++ +LIR V + Q+++ Y M R V+ + ++FSS++ AC + + EAV
Sbjct: 42 LVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGH 101
Query: 124 ----------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
I Y+ G + ++R+FD M ER+V +W+ M++ + G+M +A
Sbjct: 102 VWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASA 161
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+D M EKN TW AMI GYGK G A+ +F+++ D W M CY +N K
Sbjct: 162 GRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYK 221
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
I ++ + + + EV M ISAC LG + + + ++ D Y+ ++LI
Sbjct: 222 EVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLI 281
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M++KCG +D+A F +++ K++ ++ +I A HG +EAL MF +M + I PN V
Sbjct: 282 DMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAV 341
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TFI +LTAC+H G +E+G + F M + + I P EH CMVDLL ++G LE A +I +
Sbjct: 342 TFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRN 401
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD- 466
++ WGALL CK+H N E+ IA ++L+ L P +G+ +LL N+YA +W +
Sbjct: 402 MTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEV 461
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
++I M +K+ PG SW+
Sbjct: 462 AKIRTTMKDLGVEKRCPGSSWV 483
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 25/178 (14%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K+VH YL+ + D Y LI + G ++ A VF ++ + K F W +I
Sbjct: 259 KEVHLYLV---LQGFDLDVYIGSSLIDMYAKCG-SIDMALLVFYKL-QTKNLFCWNCIID 313
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
H + +++ ++ +M R + + TF S+L AC T G +++
Sbjct: 314 GLATHGYVEEALRMFGEMERKRIRPNAVTFISILTAC--------------THAGFIEEG 359
Query: 137 QRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKEFYDRMT-EKNSVTWVAMIAG 188
+R F SM + I+ + MV + G ++ A E MT E NS W A++ G
Sbjct: 360 RRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNG 417
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 251/473 (53%), Gaps = 23/473 (4%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+H +L KT + Q + L L L +ARQ+FD++P+ + + S+I
Sbjct: 120 QIHGFLRKTGIWSD----LFLQNCLIGLYLKCGCLGFARQIFDRMPQ-RDSVSYNSMIDG 174
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGL-MDDA 136
+V + G++ S ++ + ++I GY + ++ A
Sbjct: 175 YV----------------KCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIA 218
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
+LF M E+++ISW++++ GY G M+ AK+ + M ++ VTW MI GY K G V
Sbjct: 219 SKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVH 278
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISAC 255
+AK +FD++ D + +M YVQN Y A+E++ M ++ ++ E +V +SA
Sbjct: 279 KAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAI 338
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + A + K++ E + ALI MHSKCG + A F IKNK + ++
Sbjct: 339 AQLGRLSKAMSMNKYIVEKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNKSIDHWN 398
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI A HG + A DM +++ I+P+ +TFIGVL ACSH GLV++G FELM R
Sbjct: 399 AMIGGLAIHGHGELAFDMLMQIERCSIKPDDITFIGVLNACSHSGLVKEGLLSFELMRRK 458
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
I+P +H C+VD+L RSG +E A LI D + W L AC+ E+GE+
Sbjct: 459 HKIEPRLQHYGCIVDILSRSGSIELAKHLIEDMPMEPNDVIWRTFLIACRNRKEFEIGEL 518
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL+ + LL+N+YAS+G WKD V+MM+ + + K PGCSWI
Sbjct: 519 VAKHLILQAGYNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWI 571
>gi|345505228|gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
Length = 584
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 249/473 (52%), Gaps = 23/473 (4%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
QVH +L KT + Q + L L L +ARQVFD++P+ + + S+I
Sbjct: 114 QVHGFLRKTGIYSD----LFLQNCLIGLYLKCGCLGFARQVFDRMPQ-RDSVSYNSMIDG 168
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI-GLMDDA 136
+V + G++ S ++ + +I GYT+ ++ A
Sbjct: 169 YV----------------KCGLIESARELFDLMPREKKNLISWNCMISGYTQSEDGVNVA 212
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
+LFD M E+++ISW++++ GY ++ AK +D M K+ VTW MI GY K G V
Sbjct: 213 SKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLFDLMPRKDVVTWATMIDGYAKLGFVH 272
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMVGAISAC 255
+AKK+FDE+ + D + +M YVQN Y AI ++ M +E+ + E +V +SA
Sbjct: 273 QAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSAI 332
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + A + ++ + + ALI +SKCG + + R F I+NK + ++
Sbjct: 333 AQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWN 392
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI A HG + A DM L++ I+P+ +TFIGVL ACSH GLV++G FELM R
Sbjct: 393 AMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRK 452
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
I+P +H CMVD+L RSG +E A +LI + + W L AC H E GE+
Sbjct: 453 HKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGEL 512
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL G + LL+N+YAS G WK+ V+ + E + +K PGCSWI
Sbjct: 513 VAKHLFLQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWI 565
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 115/244 (47%), Gaps = 17/244 (6%)
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
E D W A+ + + A+ ++ +M + +V + + ++ + AC++LG V+
Sbjct: 55 EEDPFLWNAVIKSFSHGVDPRNALLLFCLMIENSVSVDKFSISLVLKACSRLGFVDFGMQ 114
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ + + ++ N LI ++ KCG L A + F R+ +D +SY+SMI + G
Sbjct: 115 VHGFLRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGL 174
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+ A ++F M E + N +++ +++ + EDG + +++F P + ++
Sbjct: 175 IESARELFDLMPRE--KKNLISWNCMISGYTQS---EDGVN---VASKLFDEMPEKDLIS 226
Query: 387 --CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI-AARHLLEL 443
++D + ++E A SL D D TW ++ A+LG + A+ L +
Sbjct: 227 WNSLIDGYVKHRRIEDAKSL-FDLMPRKDVVTWATMIDGY-----AKLGFVHQAKKLFDE 280
Query: 444 GPEK 447
P++
Sbjct: 281 MPQR 284
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 262/490 (53%), Gaps = 26/490 (5%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQ------YHYYAQFLIRLLQLPGDNLSYARQV 58
+L+ + K +L+++H+ + PH Q + YA F ++ AR++
Sbjct: 19 HLLAQCKKLRELQRIHALAIAHGLHPHQQSVSCKIFRCYADF---------GRVADARKL 69
Query: 59 FDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
FD+IP +TSL+ H+ + R++I L+A++ G GF L+A +
Sbjct: 70 FDEIPN-PDLISFTSLMSLHLQLDNQREAISLFARVVAAGHRPDGFAVVGALSASSGAGD 128
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
+ G GL +F + V+ +A++ Y+ CG ++A + +DRM+ K+
Sbjct: 129 Q----VVGRAVHGL------IFRLGLDGEVVVGNALIDMYSQCGKFESAVKVFDRMSLKD 178
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
VTW +M+ GY KC V A FD++ W A+ +VQ A+E++ M
Sbjct: 179 EVTWGSMLHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMVL 238
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
E R + V +VG +SAC +G +++ ++ + + VSNAL+ M++K G++++
Sbjct: 239 EGHRPTHVTIVGVLSACADIGALDLGRVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEM 298
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A+ F +++KD ++++MI+ G ++AL++F M G+ PN VTF+ VL+ACSH
Sbjct: 299 AFSVFQEVQSKDSFTWTTMISCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSH 358
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL+E+G + F+ M +++ I PL EH CM+DLLGR G LE+A +LI D D W
Sbjct: 359 SGLIEEGIELFDRMRQLYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWR 418
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
+LL AC V N L EIA + +++ P G LL N+YAS KW+++ ++ + +
Sbjct: 419 SLLSACLVRGNNRLAEIAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLK 478
Query: 479 KKKSPGCSWI 488
K PGCSWI
Sbjct: 479 IFKKPGCSWI 488
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/442 (33%), Positives = 244/442 (55%), Gaps = 19/442 (4%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
+ + + A Q F +P+ T W ++I V + ++ L+ +M R V++ +T
Sbjct: 120 IEDERIDEAWQYFQAMPQRNTAS-WNAMISGLVRYDRVEEASRLFEEMPRRNVIS--YT- 175
Query: 107 SSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
A++ GY KIG ++ A+ LF+ M ++NV+SW+ M++GY G
Sbjct: 176 ---------------AMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDE 220
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A+ +++M +KN V AMI GY K G+ +AK +FD+I D + W AM Y QNG
Sbjct: 221 AENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSG 280
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A++++ M + ++ ++ ++AC+ L ++ V + + + NAL
Sbjct: 281 EEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNAL 340
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+ KCG + + F +I + DV+S+++MI AFA HG AL F +MR+ +EP+
Sbjct: 341 ITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDG 400
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TF+ +L+AC H G V + F M + I EH C+VD+L R GQ+EKA+ +I
Sbjct: 401 ITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQ 460
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ D G WGALL AC VH+N +LGE+AA+ ++EL P+ +G +L+NIYA+ G W +
Sbjct: 461 EMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGE 520
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
V+ ++ E KK P SW+
Sbjct: 521 VTRVRGLMREQGVKKQPAYSWM 542
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 154/306 (50%), Gaps = 10/306 (3%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I GY K G D+++RLF M +NV+SW++M+AG + A +++ M ++N+ +
Sbjct: 83 SIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTAS 142
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W AMI+G + V EA ++F+E+ + + AM Y + G + A ++ M Q+NV
Sbjct: 143 WNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNV 202
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
V+ IS + G + A L E D+ A+I + K G D A
Sbjct: 203 ----VSWTVMISGYVENGKFDEAENLF----EQMPDKNIVAMTAMITGYCKEGKTDKAKI 254
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F +I +D+ S+++MIT +A +G +EAL + +M G++P+ T I VLTACS
Sbjct: 255 LFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLAS 314
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+++G K L+ + G + ++ + + G + + L D D +W A++
Sbjct: 315 LQEGRKTHVLVLKS-GYESRISICNALITMYCKCGSILDSE-LAFRQIDHPDVVSWNAMI 372
Query: 422 GACKVH 427
A H
Sbjct: 373 AAFARH 378
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 270/487 (55%), Gaps = 12/487 (2%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQ 61
T L + T +QLKQ+ S+L T T D Y + +L YA ++F
Sbjct: 13 TISLLDQKGLTISQLKQIQSHLTVTATLK-DPYAAAKIISLHAHSNARSSLFYAERLFLC 71
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
+ K+ F+W ++++ V ++ LY M L + FTFS V+ AC V +L
Sbjct: 72 LQN-KSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNL-- 128
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++GL Q + + + + ++ YANCG M A+ +D +++ VT
Sbjct: 129 -------QMGLCFHGQVVKFGWESYDFVQ-NGLIHLYANCGFMDLARNMFDMSIKRDVVT 180
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +I+GY G+V A+++FD + E + W A+ YV+ G+ K A+E++ M+
Sbjct: 181 WTCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGF 240
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
R++ ++VGA++AC LG ++ + +V + ALI M++KCG +++A
Sbjct: 241 RLNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACS 300
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F + ++DV +++ +I+ A+H KS+ A+D+F +M++EG+ PN+VTF+ VL ACS G+
Sbjct: 301 VFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGM 360
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + FE M+ + I+P +H C+VDLLGR+G++E+A ++ + D+ T GALL
Sbjct: 361 VDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALL 420
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
AC+VH + +LGE L++ + G LL+N+YAS KW+D+ ++ + + +K
Sbjct: 421 DACRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRK 480
Query: 482 SPGCSWI 488
PGCS I
Sbjct: 481 LPGCSSI 487
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 245/455 (53%), Gaps = 15/455 (3%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
+ + LI GD L A VF +I + K W S+I V +++ L+ +M
Sbjct: 167 FISNSLIHFYSSLGD-LDSAYLVFSKIVE-KDIVSWNSMISGFVQGGSPEEALQLFKRMK 224
Query: 96 RLGVLTSGFTFSSVLNACA-RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
+ T VL+ACA R+ C Y + +D N+I +AM
Sbjct: 225 MENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID-----------INLILSNAM 273
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+ Y CG+++ A+ +D+M EK+ V+W MI GY K G+ A++VFD + D + W
Sbjct: 274 LDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWN 333
Query: 215 AMTVCYVQNGYAKAAIEMYKVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
A+ Y QNG K A+ +++ ++ +N + +EV + ++AC QLG +++ + ++ +
Sbjct: 334 ALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKK 393
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+++ +LI M+SKCG+L+ A F ++ +DV +S+MI A HG + A+D+
Sbjct: 394 QGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDL 453
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F KM+ ++PN VTF +L ACSH GLV++G F M V+G+ P ++H CMVD+LG
Sbjct: 454 FSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILG 513
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R+G LE+A LI A WGALLGAC+++ N EL E+A LLE G L
Sbjct: 514 RAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVL 573
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+NIYA GKW ++ + + +K PGCS I
Sbjct: 574 LSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSI 608
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 249/440 (56%), Gaps = 7/440 (1%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ AR VF+++ K +W ++I +V ++ L+ +M V FTF+SVL
Sbjct: 243 DVGAARSVFEEV-DGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVL 301
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+ACA V G + G + Q F + E + +A+V Y+ CGN+ A+
Sbjct: 302 SACANVGLFAH----GKSVHGQIIRLQPNF--VPEAALPVNNALVTFYSKCGNIAVARRI 355
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D MT K+ V+W +++GY + + +A +VF+E+ + W M YV G+A+ A+
Sbjct: 356 FDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDAL 415
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+++ MR ENV+ + GAI+AC +LG ++ L H+ + + +N NALI M+
Sbjct: 416 KLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMY 475
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
++CG + A F + N D +S+++MI+A HG +EAL++F +M EGI P++++F+
Sbjct: 476 ARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFL 535
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
VLTAC+H GLV++G + FE M R FGI P +H T ++DLLGR+G++ +A LI
Sbjct: 536 TVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPF 595
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
W A+L C+ + ELG AA L ++ P+ G LL+N Y++ G W D+ V
Sbjct: 596 EPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARV 655
Query: 471 KMMISETEKKKSPGCSWISS 490
+ ++ + KK PGCSWI +
Sbjct: 656 RKLMRDRGVKKEPGCSWIEA 675
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 188/429 (43%), Gaps = 72/429 (16%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG------ 103
D L A FD +P + +++ N V+ A+ R S A +L SG
Sbjct: 102 DRLPAAVSFFDAVPPARRD----TVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDD 157
Query: 104 FTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQ---RLFDSMAERNVISWSAMVAGYAN 160
++F+++L+A +P+ I + AQ + S A + +A+VA Y
Sbjct: 158 YSFTALLSAGGHLPN-----------ISVRHCAQLHCSVLKSGAGGALSVCNALVALYMK 206
Query: 161 CGNMKA---AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
C + +A A++ D M K+ +TW M+ GY + G+V A+ VF+E+ W AM
Sbjct: 207 CESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMI 266
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG--------DVEMAAILAK 269
YV +G A A E+++ M E V + E +SAC +G ++ +
Sbjct: 267 SGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPN 326
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS------------- 316
V E V+NAL+ +SKCG + +A R F + KDV+S+++
Sbjct: 327 FVPEAALP----VNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDK 382
Query: 317 ------------------MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
M++ + G +++AL +F KMR+E ++P T+ G + AC
Sbjct: 383 AVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGE 442
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
G ++ G KQ G + ++ + R G +++AH + + + D+ +W
Sbjct: 443 LGALKHG-KQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNI-DSVSWN 500
Query: 419 ALLGACKVH 427
A++ A H
Sbjct: 501 AMISALGQH 509
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 41/299 (13%)
Query: 80 LHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRL 139
LHA S LL+A H P L +I YT + A L
Sbjct: 43 LHARLLTSALLHAPPH---------------------PHLTLRLIHLYTLSRDLPAAATL 81
Query: 140 FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM--TEKNSVTWVAMIAGYGKCGEVRE 197
F A+ +S +++VA YA + AA F+D + +++V A+I+ Y +
Sbjct: 82 F--CADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAP 139
Query: 198 AKKVFDEI-----SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
A VF + PD + A+ + G I + + Q + + + GA+
Sbjct: 140 AVAVFRSLLASGSLRPDDYSFTAL----LSAGGHLPNISV-RHCAQLHCSVLKSGAGGAL 194
Query: 253 SACTQLGDVEM------AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
S C L + M A A+ V + ++ + ++ + + G + A F +
Sbjct: 195 SVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEV 254
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
K + +++MI+ + G + EA ++F +M E + ++ TF VL+AC++ GL G
Sbjct: 255 DGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHG 313
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 251/473 (53%), Gaps = 23/473 (4%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+H +L KT + Q + L L L +ARQ+FD++P+ + + S+I
Sbjct: 117 QIHGFLRKTGIWSD----LFLQNCLIGLYLKCGCLGFARQIFDRMPQ-RDSVSYNSMIDG 171
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGL-MDDA 136
+V + G++ S ++ + ++I GY + ++ A
Sbjct: 172 YV----------------KCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIA 215
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
+LF M E+++ISW++++ GY G M+ AK+ + M ++ VTW MI GY K G V
Sbjct: 216 SKLFAEMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVH 275
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMVGAISAC 255
+AK +FD++ D + +M YVQN Y A+E++ M +E+ + E +V +SA
Sbjct: 276 KAKTLFDQMPHRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAI 335
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + A + ++ E + ALI M+SKCG + A F RI+NK + ++
Sbjct: 336 AQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWN 395
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI A HG + A DM L++ I+P+ +TF+G+L ACSH GLV++G FELM R
Sbjct: 396 AMIGGLAIHGLGESAFDMLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRRK 455
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
I+P +H CMVD+L RSG +E A +LI + + W L AC H E GE+
Sbjct: 456 HKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPMEPNDVIWRTFLTACSHHKEFETGEV 515
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL+ + LL+N+YAS G WKD+ V+ M+ E E +K PGCSWI
Sbjct: 516 VAKHLILQAGYNPSSYVLLSNMYASFGMWKDARRVRTMMKERELQKVPGCSWI 568
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 269/505 (53%), Gaps = 51/505 (10%)
Query: 11 KTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGD-NLSYARQVFDQI--PKC 65
KT LKQ+H+ ++KT + P A L+R + +L YAR++F + P C
Sbjct: 22 KTMQDLKQLHAQMIKTAQIRDP-----LAAAELLRFSAVSDHRDLDYARKIFRSMHRPNC 76
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSLLEA-- 122
F + +LIR ++L++ +M V + FTF SV AC R L E
Sbjct: 77 ---FSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQ 133
Query: 123 -------------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
V+ Y G+M+DA RLF R V V G C
Sbjct: 134 VHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLF----YRRVF-----VDG---CDG 181
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
++ K R + + V W MI GY + GE+ A+ +FDE+ + W M Y Q+
Sbjct: 182 IRDKK----RRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQS 237
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G+ K A+E+++ M+ V + V +V + A ++LG +E+ + + + +
Sbjct: 238 GHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG 297
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
+ALI M++KCG ++ A + F + ++V+++S++I A HG++++ LD F M G+
Sbjct: 298 SALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVM 357
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
P+ VT+IG+L+ACSH GLV +G F+ M RV G++P EH CMVDLLGR+G LE++
Sbjct: 358 PSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEE 417
Query: 404 LIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGK 463
LI++ D W ALLGACK+H N E+G+ A HL+EL P +G+ L+NIYAS+G
Sbjct: 418 LILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGN 477
Query: 464 WKDSEIVKMMISETEKKKSPGCSWI 488
W+ V++M+ E + +K PGCSWI
Sbjct: 478 WEGVAKVRLMMKEMDVRKDPGCSWI 502
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 269/512 (52%), Gaps = 56/512 (10%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
+L+ K+ LKQ+ + +L+T H +F++ NL YA ++F+ I
Sbjct: 37 FLLKNCKSMQHLKQIQTQILRT--GFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYI-D 93
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA---------- 114
F++ +I+ + FR+++LL+ ++ G+ FT+ V A
Sbjct: 94 IPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEK 153
Query: 115 ----RVPSLLE--AVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
V S LE +C Y ++G + + +++F+ M +R+V+SW+ +++GY C
Sbjct: 154 VYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRR 213
Query: 164 MKAA----KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
+ A ++ ++ M K + W +M++GY CG++ EA+++F+ D W AM
Sbjct: 214 YEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMING 273
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
YVQ A+ +++ M+ + V +V A+L V
Sbjct: 274 YVQFNRFDDAVALFREMQIKRVSPDRFTLV---------------ALLTDAV-------- 310
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
V ALI M++KCG+++ + F+ +K KD S++S+I A +GK+ +AL++F +M
Sbjct: 311 --VGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQ 368
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
G++P+ +TFIGVL+ACSHGGLVE+G K F MT V+ I+P EH C++DLLGR+GQL+
Sbjct: 369 TGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLD 428
Query: 400 KAHSLIMDYKDFCD---AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
+A LI + + +GALL AC+ H N E+GE A+ L+ + + LLAN
Sbjct: 429 EAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLAN 488
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
IYAS +W+D V+ + + KK PGCS +
Sbjct: 489 IYASADRWEDVTKVRRKMKDLGVKKVPGCSSV 520
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 276/532 (51%), Gaps = 66/532 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H+Y+L+ T+ LI + + R++FDQ+ K WT++I
Sbjct: 158 KQIHAYVLRRGTEMDVSV---VNVLIDFYT-KCNRVKAGRKLFDQMV-VKNIISWTTMIS 212
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL--------------LEA 122
++ ++ +++ L+ +M+RLG GF +SVL +C + +L LE+
Sbjct: 213 GYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLES 272
Query: 123 -------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD--- 172
+I Y K L+ DA+++FD MAE+NVIS++AM+ GY++ + A E +
Sbjct: 273 NEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR 332
Query: 173 -RMTEKNSVTWV-----------------------------------AMIAGYGKCGEVR 196
R+ + +T+V A+I Y KC V+
Sbjct: 333 VRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVK 392
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
+A+ VF+E++E D W AM Y Q+ + A+++Y ++ + +E I+A +
Sbjct: 393 DARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAAS 452
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L + + + D +V+NAL+ M++KCG ++ A + F+ +DV+ ++S
Sbjct: 453 NLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNS 512
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI+ A HG+++EAL MF +M EGI+PN VTF+ VL+ACSH G VEDG F M F
Sbjct: 513 MISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-F 571
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
GIKP TEH C+V LLGRSG+L +A I A W +LL AC++ N ELG+ A
Sbjct: 572 GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYA 631
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A + P+ +G+ LL+NI+AS G W D + V+ + +E K PG SWI
Sbjct: 632 AEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWI 683
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 203/474 (42%), Gaps = 67/474 (14%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+H +++++ DQ Y LI GB + AR VFDQ+ + KT WT++I
Sbjct: 58 QLHGFVVRS---GFDQDVYVGTSLIDFYSKNGB-IEVARLVFDQLLE-KTAVTWTTIIAG 112
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP-------------------- 117
+ S+ L+A+M V+ + SSVL+AC+ +
Sbjct: 113 YTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 172
Query: 118 -SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------------------ 158
S++ +I YTK + ++LFD M +N+ISW+ M++GY
Sbjct: 173 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 232
Query: 159 --------------ANCGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
+CG+++A ++ E N +I Y K + +
Sbjct: 233 LGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXD 292
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
AKKVFD ++E + + AM Y A+E++ MR S + V +
Sbjct: 293 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSAS 352
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
L +E++ + + + + +ALI ++SKC Y+ A F + KD++ +++M
Sbjct: 353 LFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAM 412
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
+ H +++EAL ++ ++ +PN+ TF ++TA S+ + G +QF G
Sbjct: 413 FFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHG-QQFHNQLVKMG 471
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
+ +VD+ + G +E+A + + + D W +++ H AE
Sbjct: 472 LDFCPFVTNALVDMYAKCGSIEEARKMF-NSSIWRDVVCWNSMISTHAQHGEAE 524
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 50/286 (17%)
Query: 85 RQSILLYAKMHRL-GVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRL---- 139
++++++ + R G + F +SV+ AC T++G+++ +L
Sbjct: 18 EEALMVFVDLQRKSGEHPNEFVLASVIRAC--------------TQLGVVEKGAQLHGFV 63
Query: 140 FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAK 199
S +++V ++++ Y+ GB++ A+ +D++ EK +VTW +IAGY KCG
Sbjct: 64 VRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGR----- 118
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+ ++E++ MR+ NV + +SAC+ L
Sbjct: 119 --------------------------SXVSLELFAQMRETNVVPDRYVVSSVLSACSMLE 152
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+E + +V + V N LI ++KC + + F ++ K++IS+++MI+
Sbjct: 153 FLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMIS 212
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ + EA+ +F +M G +P+ VLT+C +E G
Sbjct: 213 GYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQG 258
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 224 GYAKAAIEMY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
GY++ A+ ++ + R+ +E + I ACTQLG VE A L V D+ YV
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
+LI +SK G +++A F ++ K ++++++I + G+S +L++F +MR +
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134
Query: 343 EPNQVTFIGVLTACSHGGLVEDG 365
P++ VL+ACS +E G
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGG 157
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 323 DHGKSQEALDMFLKM-RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
D G S+EAL +F+ + R G PN+ V+ AC+ G+VE G + + R G
Sbjct: 13 DEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRS-GFDQD 71
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
T ++D ++G +E A L+ D A TW ++
Sbjct: 72 VYVGTSLIDFYSKNGBIEVAR-LVFDQLLEKTAVTWTTIIAG 112
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 261/475 (54%), Gaps = 20/475 (4%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H+ +++ L PH Y A L+ L G A+ VF+ + + WT LI
Sbjct: 290 KQLHAQVIRNL--PHID-PYVASALVELYAKSG-CFKEAKGVFNSLHD-RNNVAWTVLIS 344
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ + F +S+ L+ +M + F +++++ C C + L
Sbjct: 345 GFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC-----------CSRMDLCLGRQL 393
Query: 137 QRL-FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
L S + V+ +++++ YA C N+++A+ + M EK+ V+W +MI Y + G V
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 453
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAISA 254
+A++ FD +SE + W AM Y+Q+G + + MYKVM +E VR V V
Sbjct: 454 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 513
Query: 255 CTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
C LG ++ I+ + V G T+ V+NA+I M+SKCG + A + F + KD++S
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLIIDTS-VANAVITMYSKCGRILEARKVFDFLNVKDIVS 572
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
+++MIT ++ HG ++A+++F + G +P+ ++++ VL+ CSH GLV++G F++M
Sbjct: 573 WNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMK 632
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
R I P EH +CMVDLLGR+G L +A LI D A WGALL ACK+H N EL
Sbjct: 633 RAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELA 692
Query: 434 EIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+AA+H+ EL +G+ L+A IYA GK DS ++ ++ + KK+PG SW+
Sbjct: 693 ELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWM 747
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 14/307 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVL 110
LS A ++F ++P + W +L+ + + S+ + MHR G + FT + +
Sbjct: 87 LSDAVELFGRMP-ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAM 145
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQ-RLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+C + G+ + L A + FDS + V + A+V + CG + A
Sbjct: 146 KSCGAL---------GWHSLALQLLAMVQKFDSQDDSEVAA--ALVDMFVRCGAVDLASR 194
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ R+ E +M+AGY K V A ++FD + E D W M Q+G + A
Sbjct: 195 LFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 254
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++M M+ + VR+ +++AC +L + L V YV++AL+ +
Sbjct: 255 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVEL 314
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++K G A F+ + +++ ++++ +I+ F +G E++++F +MR E + +Q
Sbjct: 315 YAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFAL 374
Query: 350 IGVLTAC 356
+++ C
Sbjct: 375 ATLISGC 381
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 147/301 (48%), Gaps = 17/301 (5%)
Query: 119 LLEAVICGYTKIGLMDDAQRLF-DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
L ++ Y G + DA+RL +A NVI+ + M+ GYA G + A E + RM +
Sbjct: 41 LQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR 100
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEI-----SEPDASCWA-AMTVCYVQNGYAKAAIE 231
+ +W +++GY + + + + F + S P+A A AM C ++ A
Sbjct: 101 DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQL 160
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+ V + ++ SEVA + + G V++A+ L + E T + N+++ +
Sbjct: 161 LAMVQKFDSQDDSEVA-AALVDMFVRCGAVDLASRLFVRIKEP----TMFCRNSMLAGYV 215
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
K +D A F + +DV+S++ M++A + G+ +EALDM + M+++G+ + T+
Sbjct: 216 KTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTS 275
Query: 352 VLTACSHGGLVEDGCKQF--ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
LTAC+ + G KQ +++ + I P + +V+L +SG ++A +
Sbjct: 276 SLTACARLSSLRWG-KQLHAQVIRNLPHIDPYVA--SALVELYAKSGCFKEAKGVFNSLH 332
Query: 410 D 410
D
Sbjct: 333 D 333
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 261/475 (54%), Gaps = 20/475 (4%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H+ +++ L PH Y A L+ L G A+ VF+ + + WT LI
Sbjct: 310 KQLHAQVIRNL--PHID-PYVASALVELYAKSG-CFKEAKGVFNSLHD-RNNVAWTVLIS 364
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ + F +S+ L+ +M + F +++++ C C + L
Sbjct: 365 GFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC-----------CSRMDLCLGRQL 413
Query: 137 QRL-FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
L S + V+ +++++ YA C N+++A+ + M EK+ V+W +MI Y + G V
Sbjct: 414 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 473
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAISA 254
+A++ FD +SE + W AM Y+Q+G + + MYKVM +E VR V V
Sbjct: 474 AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 533
Query: 255 CTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
C LG ++ I+ + V G T+ V+NA+I M+SKCG + A + F + KD++S
Sbjct: 534 CADLGANKLGDQIIGRTVKVGLIIDTS-VANAVITMYSKCGRILEARKVFDFLNVKDIVS 592
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
+++MIT ++ HG ++A+++F + G +P+ ++++ VL+ CSH GLV++G F++M
Sbjct: 593 WNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMK 652
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
R I P EH +CMVDLLGR+G L +A LI D A WGALL ACK+H N EL
Sbjct: 653 RAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELA 712
Query: 434 EIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+AA+H+ EL +G+ L+A IYA GK DS ++ ++ + KK+PG SW+
Sbjct: 713 ELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWM 767
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 14/307 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVL 110
LS A ++F ++P + W +L+ + + S+ + MHR G + FT + +
Sbjct: 107 LSDAVELFGRMP-ARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAM 165
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQ-RLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+C + G+ + L A + FDS + V + A+V + CG + A
Sbjct: 166 KSCGAL---------GWHSLALQLLAMVQKFDSQDDSEVAA--ALVDMFVRCGAVDLASR 214
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ R+ E +M+AGY K V A ++FD + E D W M Q+G + A
Sbjct: 215 LFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 274
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++M M+ + VR+ +++AC +L + L V YV++AL+ +
Sbjct: 275 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVEL 334
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++K G A F+ + +++ ++++ +I+ F +G E++++F +MR E + +Q
Sbjct: 335 YAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFAL 394
Query: 350 IGVLTAC 356
+++ C
Sbjct: 395 ATLISGC 401
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 147/301 (48%), Gaps = 17/301 (5%)
Query: 119 LLEAVICGYTKIGLMDDAQRLF-DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
L ++ Y G + DA+RL +A NVI+ + M+ GYA G + A E + RM +
Sbjct: 61 LQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPAR 120
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEI-----SEPDASCWA-AMTVCYVQNGYAKAAIE 231
+ +W +++GY + + + + F + S P+A A AM C ++ A
Sbjct: 121 DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQL 180
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+ V + ++ SEVA + + G V++A+ L + E T + N+++ +
Sbjct: 181 LAMVQKFDSQDDSEVA-AALVDMFVRCGAVDLASRLFVRIKEP----TMFCRNSMLAGYV 235
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
K +D A F + +DV+S++ M++A + G+ +EALDM + M+++G+ + T+
Sbjct: 236 KTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTS 295
Query: 352 VLTACSHGGLVEDGCKQF--ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
LTAC+ + G KQ +++ + I P + +V+L +SG ++A +
Sbjct: 296 SLTACARLSSLRWG-KQLHAQVIRNLPHIDPYVA--SALVELYAKSGCFKEAKGVFNSLH 352
Query: 410 D 410
D
Sbjct: 353 D 353
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 272/550 (49%), Gaps = 75/550 (13%)
Query: 4 KYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFD 60
K L+ + T N LKQ+H L+ + + ++ FL+ LL L Y+ +F
Sbjct: 17 KTLISVACTVNHLKQIHVSLI-------NHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFS 69
Query: 61 --QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
Q P FL+ SLI V + F +++ L+ + + G+ GFTF VL AC R S
Sbjct: 70 HTQFPNI---FLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 119 L-----LEAVI--CG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
L +++ CG Y+ G ++DA +LFD + +R+V++W+A+ +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 158 YANCGNMKAAKEFYDRMTE---------------------------------------KN 178
Y G + A + + +M E KN
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
S ++ Y KCG++ +A+ VFD + E D W+ M Y N + K IE++ M Q
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
EN++ + ++VG +S+C LG +++ +D +++NALI M++KCG +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
+ F +K KD++ ++ I+ A +G + + +F + GI P+ TF+G+L C H
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL++DG + F ++ V+ +K EH CMVDL GR+G L+ A+ LI D +A WG
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALL C++ + +L E + L+ L P GN L+NIY+ G+W ++ V+ M+++
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546
Query: 479 KKKSPGCSWI 488
KK PG SWI
Sbjct: 547 MKKIPGYSWI 556
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 261/529 (49%), Gaps = 60/529 (11%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP--KCKTQFLWTSLI 75
Q H+ LL + L+ L +P + A VF ++P + F W + I
Sbjct: 28 QCHALLLTSGHLAASPLRLSNHLLLALASVP-SAAALADVVFARLPLPAARDPFAWNTAI 86
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS----------------- 118
R H A R ++L +A+M R GV +TF +VL AC P
Sbjct: 87 RLHA-PARPRAALLYFARMRRCGVRPDAYTFPAVLKACGCAPGCRAGLLVHAEAVRRGLA 145
Query: 119 ----LLEAVICGYTKIGLMDDAQRLFDSMA--ERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ A+I Y +I + +++FD R+++SW++MVAGY CG M A+E +D
Sbjct: 146 ADLFTVNALISFYCRILDIRSGRKVFDEAGGVSRDLVSWNSMVAGYVGCGEMGLAQEMFD 205
Query: 173 RMTEKNSVTWVAMIAGYGKCGE--VREAKKVFDEISEPDASCWAAMTVCYVQNGY----- 225
M +K++ +W +I GYGK G V A+++FD++ E D CW +M Y ++G
Sbjct: 206 EMPQKDTFSWATLIDGYGKQGGAGVDRARELFDQMPERDLVCWNSMIDGYARHGRMDEAR 265
Query: 226 --------------------------AKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
AK A+E ++ M + +R +A VGA+SAC QLG
Sbjct: 266 SLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCGLRPDRIAAVGAVSACAQLG 325
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+E L ++++ V ALI M+ KCG LDLA F + + V++++ MI
Sbjct: 326 ALEQGRWLHSYLEKKKLLSDVVVQTALIDMYVKCGCLDLAMLIFESMAERSVVTWNVMIV 385
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK 379
HG +A+ +F +M E + + ++ +G+LTAC+H GLV +G + F M + FGI
Sbjct: 386 GLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAGLVSEGLEIFHRMKKDFGID 445
Query: 380 PLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
P EH +VDLLGR+G+L++A I WG+LL AC+ H EL E++
Sbjct: 446 PKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSHSCVELAELSVER 505
Query: 440 LLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L +LG + +G LL+NIYA G W D ++ ++S+ +K G S I
Sbjct: 506 LADLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVI 554
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 265/498 (53%), Gaps = 21/498 (4%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQY--HYYAQ---FLIRLLQ--LPGDNLSY 54
TS + +P TF QL + L + + + H Q H AQ L L+ + NLS+
Sbjct: 47 TSSFSLPSHSTFVQLLKKRPSLTQ-IKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSF 105
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG--FTFSSVLNA 112
AR VFDQ P +W +I+ + ++S+ L+ +M G TS +TF+ V A
Sbjct: 106 ARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTA 165
Query: 113 CARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
C+R P+L GY + + + E ++ +++V Y+ M AK +D
Sbjct: 166 CSRHPTLR-----GYGE----NVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFD 216
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
M +++ +TW +++ GY GE+ A+++FD + + WA M YV + + A++
Sbjct: 217 EMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQC 276
Query: 233 YKVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+ M + V+ +E +V +SAC LG ++ + ++D+ ++ +S ALI M++
Sbjct: 277 FNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYA 336
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG +D A R F + +D+++++SMI+ + HG E L F +M EG +P+ +T +G
Sbjct: 337 KCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLG 396
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL CSH GLVE+G F M ++GI P EH C++DLLGR+G+LE A I
Sbjct: 397 VLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPME 456
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS-ALLANIYASMGKWKDSEIV 470
D W ALL AC++H + +LGE H+ EL P G LL+N+YASMG+W+ V
Sbjct: 457 PDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKV 516
Query: 471 KMMISETEKKKSPGCSWI 488
+ +S+ + PGCSWI
Sbjct: 517 RKAMSQRGSEGCPGCSWI 534
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 264/491 (53%), Gaps = 22/491 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
++ +S+ N LKQV S+++ + H+ L+R L NLSYAR +FD+
Sbjct: 30 VISKSRHLNHLKQVQSFMIVSGL---SHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFP 86
Query: 66 KTQFLWTSLIRNHV--LHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSLLEA 122
T L+ +++ + L H + + M +R + F + VL + + S
Sbjct: 87 NTH-LYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFST 145
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-CGNMKAAKEFYDRMTEKNSVT 181
+ LF S V+ +A++ YA+ ++ A++ +D M+E+N V+
Sbjct: 146 PLVH----------THLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-N 240
W AM++GY + G++ A +F+++ E D W A+ QNG A+ +++ M E +
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+R +EV +V +SAC Q G +++A + +VSN+L+ ++ KCG L+ A
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMF---LKMRNEGIEPNQVTFIGVLTACS 357
F K + +++SMI FA HG+S+EA+ +F +K+ I+P+ +TFIG+L AC+
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
HGGLV G F+LMT FGI+P EH C++DLLGR+G+ ++A ++ K D W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
G+LL ACK+H + +L E+A ++L+ L P G A++AN+Y MG W+++ + MI
Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQ 495
Query: 478 EKKKSPGCSWI 488
K PG S I
Sbjct: 496 NAYKPPGWSRI 506
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 260/482 (53%), Gaps = 31/482 (6%)
Query: 14 NQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTS 73
NQ+KQ+H++ L+T L RLL +P NL YAR++FD + + FL+
Sbjct: 2 NQIKQLHAHCLRTGVDE------TKDLLQRLLLIP--NLVYARKLFD-LHRNPCIFLYNK 52
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA-----RVPSLLEAVICGYT 128
LI+++ +H +SI+LY + G+ + TF+ + A A R LL +
Sbjct: 53 LIQSYSVHHQPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHS------ 106
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
+ F S E + +A++ YA G + A+ +D M+ ++ W AMI G
Sbjct: 107 ---------QFFRSGFESDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITG 157
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVA 247
Y + G+++ A ++FD + + + W + + QNG A+ M+ M ++ +V+ + +
Sbjct: 158 YQRRGDMKAAMELFDSMPNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHIT 217
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+V + AC LG++E+ L + E YV NA + M+SKCG +D+A R F I
Sbjct: 218 LVSVLPACANLGELEIGRRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIG 277
Query: 308 N-KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
N +++IS++SMI + A HGK EAL+++ +M EG P+ VTF+G+L AC HGG+V G
Sbjct: 278 NQRNLISWNSMIGSLATHGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGK 337
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
+ + M V I P EH CM+DLLGR G+L++A LI DA WG LLGAC
Sbjct: 338 ELLKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSF 397
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H N E+ EIA+ L++L P GN +++NIYA+ KW ++ ++ + K+ G S
Sbjct: 398 HGNVEIAEIASEALMKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
Query: 487 WI 488
+
Sbjct: 458 YF 459
>gi|357144887|ref|XP_003573448.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Brachypodium distachyon]
Length = 530
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 247/445 (55%), Gaps = 17/445 (3%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLI-RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
D+ AR + D+ P + + L+ RN +L + R L A+ L
Sbjct: 98 DHPDAARSLLDETPPAGARSAHSLLVSRNSLLASLLRSGDLPAAR-----ALFDQMPVRD 152
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
V++ +++ G K G +D A LF M ERN SW+A++ G G++ A+
Sbjct: 153 VVS--------WNSMVAGLAKAGRLDCAIELFHQMPERNAASWNAVMCGLIAHGHLARAR 204
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAK 227
E++++M +++V+W+ MI+GY K G+V+ A +F+ + ++ D W AM CY QNG A+
Sbjct: 205 EWFEQMPVRSNVSWITMISGYAKAGDVQAAASLFERMENQNDLYAWNAMIACYGQNGCAR 264
Query: 228 AAIEMYKVMRQENVRI--SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
AI ++ M + ++ + +E ISAC+QLG++ + + + +++ A
Sbjct: 265 EAISVFIRMLKPHICVLPNEKTFSSVISACSQLGNLRFGLWVESFMCSLGIELDDHLRTA 324
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ +++K G +D A++ F ++ +DV+SYS+MI +GK EA+ +F +M + I PN
Sbjct: 325 LVDLYTKSGRIDNAFKLFRGLRTRDVVSYSAMIVGCGMNGKLSEAIGLFKEMSDAKIVPN 384
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
VTF+G+L+A +H GL+E+ F M+ + I+P EH T MVDLLGRSG+L++A LI
Sbjct: 385 AVTFVGLLSAYNHAGLMEEARACFAFMSSKYNIRPSMEHYTIMVDLLGRSGKLDEAFQLI 444
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
M A WGALL AC++H N ELGE+ A EL P ++G LL NIYA KW
Sbjct: 445 MKMPMQPHASVWGALLLACRLHTNVELGEMVASKCFELAPGESGYYILLGNIYAQANKWD 504
Query: 466 DSEIVKMMISETEKKKSPGCSWISS 490
+ ++ + E K PG SW+ +
Sbjct: 505 KVKSLRKTMMEMGLSKMPGSSWVQA 529
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 235/435 (54%), Gaps = 13/435 (2%)
Query: 55 ARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
AR +FD++ C + W +I + + H+ ++ L+ M + +VL+AC
Sbjct: 175 ARLLFDKM--CHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSAC 232
Query: 114 ARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
+L G T + D DS + +A++ YANCG M A++ YD
Sbjct: 233 GHAGNLSY----GRTIHEFVKDNGYAIDSHLQ------TALINMYANCGAMDLARKIYDG 282
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
++ K+ + AM++GY K G V++A+ +FD++ E D CW+AM Y ++ + A++++
Sbjct: 283 LSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLF 342
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M Q+ ++ M+ ISAC+ +G + A + +VD R V+NALI M++KC
Sbjct: 343 DEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKC 402
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L A F + K+VIS+SSMI AFA HG + A+ +F +M+ IEPN VTFIGVL
Sbjct: 403 GNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVL 462
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC H GLVE+G K F M GI P EH CMVDL R+ L KA LI +
Sbjct: 463 YACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPN 522
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WG+L+ AC+VH AELGE AA+ LLEL P+ G +L+NIYA +W D +++
Sbjct: 523 VIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKS 582
Query: 474 ISETEKKKSPGCSWI 488
+S K S I
Sbjct: 583 MSYKGISKEKASSRI 597
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 206/474 (43%), Gaps = 88/474 (18%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQF--LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
LKQ+H+ +L + T P + ++ I L +L YA VF QIP T F +
Sbjct: 31 HLKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHF--S 88
Query: 73 SLIRNHVLHAHF-RQSILLYAKMHRLGVLT-SGFTFSSVLNACARVPSLLEAV-ICGY-T 128
+ + H+ + F ++I LY + + F+F S+L A ++V + + I G +
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K+G +DD + ++A YA+C + A+ +D+M ++V W +I G
Sbjct: 149 KLGFVDDP------------FIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDG 196
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y QNG+ A+ +++ MR +++ V +
Sbjct: 197 Y-------------------------------CQNGHYDDALRLFEDMRSSDMKPDSVIL 225
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR------- 301
+SAC G++ + + V + +++ ALI+M++ CG +DLA +
Sbjct: 226 CTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSS 285
Query: 302 ------------------------EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
F ++ +D++ +S+MI+ +A+ + QEAL +F +M
Sbjct: 286 KHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEM 345
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ P+Q+T + V++ACSH G + + R + L+ + ++D+ + G
Sbjct: 346 LQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVN-NALIDMYAKCGN 404
Query: 398 LEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
L KA + M K+ +W +++ A +H NA+ R + E+ E G
Sbjct: 405 LVKAREVFENMPRKNVI---SWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG 455
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 272/489 (55%), Gaps = 21/489 (4%)
Query: 5 YLVP---RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQ 61
Y +P R K+ N+ K++H+ ++ Q + ++ L GD + YA ++F+Q
Sbjct: 12 YFIPFLQRVKSRNEWKKIHACII---VHGLSQSSFMVTKMVDLCDKLGD-MDYATRLFNQ 67
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSVLNACARVPS-L 119
+ FL+ S+IR + ++ + I +Y ++ R + FTF + +CA + S
Sbjct: 68 VSNPNV-FLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCY 126
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
L + G+ L+ +V++ +A++ Y ++ A + +D M+E++
Sbjct: 127 LGKQVHGH-----------LYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDV 175
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
++W ++++GY + G++++AK +F + + W AM Y G A++ ++ M+
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ E++++ + +C LG +E+ + + + + V NALI M+SKCG L A
Sbjct: 236 GIEPDEISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQA 295
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F + K KDVIS+S+MI+ +A HG + A + F++M+ ++PN +TF+G+L+ACSH
Sbjct: 296 IQLFEQTKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHV 355
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GL + G K F++M + + I+P EH C++D+L R+G+LE+A + D+ WG+
Sbjct: 356 GLWQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGS 415
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL +C+ N ++ +A HL+E+ P+ GN LLANIYA +GKW+D ++ +I +
Sbjct: 416 LLSSCRTKGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENM 475
Query: 480 KKSPGCSWI 488
KK+PGCS I
Sbjct: 476 KKTPGCSLI 484
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 165/550 (30%), Positives = 270/550 (49%), Gaps = 75/550 (13%)
Query: 4 KYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFD 60
K L+ + TFN LKQVH L+ H H+ FL+ LL L Y+ +F
Sbjct: 17 KTLISVASTFNHLKQVHVSLI------HHHLHH-DTFLVNLLLKRTLFFRQTHYSFLLFS 69
Query: 61 --QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
Q P FL+ +LI V + F +++ L+ + + G+ GFTF VL AC R +
Sbjct: 70 HTQFPNI---FLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126
Query: 119 L-----LEAVI--CG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
L +++ CG Y+ G ++DA ++F+ + ER+V++W+A+ +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSG 186
Query: 158 YANCGNMKAAKEFYDRMTE---------------------------------------KN 178
Y G + A + + +M E KN
Sbjct: 187 YTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKN 246
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
S ++ Y KCG++ +A+ VFD + E D W+ M Y N + K IE + M Q
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQ 306
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
EN++ + ++VG +S+C LG +++ +D +++NALI M++KCG +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
+ F +K KD++ ++ I+ A +G + + +F + GI P+ TF+G+L C H
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL++DG + F ++ V+ +K EH CMVDL GR+G L+ A+ LI D +A WG
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALL C++ + +L E + L+ L P GN L+NIY+ G+W ++ V+ M++
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKG 546
Query: 479 KKKSPGCSWI 488
KK PG SWI
Sbjct: 547 MKKIPGYSWI 556
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 265/488 (54%), Gaps = 38/488 (7%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLS---YARQVFDQI 62
L+ K NQ+ +++ +++ +H+ F++ L NL+ YA ++F
Sbjct: 38 LLQNCKHNNQIPPIYAKIIRN-------HHHQDPFVVFELLRVCSNLNSIGYASKIFSHT 90
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA 122
+L+T+LI VL ++ I LY +M ++ + +SVL AC +L E
Sbjct: 91 QN-PNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEG 149
Query: 123 --VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
V K+GL + R++ ++ Y CG + A+ +D M E++ V
Sbjct: 150 REVHSQVLKLGLSSN----------RSI--RIKLIELYGKCGAFEDARRVFDEMPERDVV 197
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
MI Y FD D CW AM V+NG + A+E+++ M++E+
Sbjct: 198 ASTVMINYY------------FDH-GIKDTVCWTAMIDGLVRNGESNRALEVFRNMQRED 244
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V +EV +V +SAC++LG +++ + ++D+ + ++V ALI+M+S+CG +D A
Sbjct: 245 VMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQ 304
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
R F ++K K+VI+Y+SMI FA HGKS EA+++F + +G P+ VTF+GVL ACSHGG
Sbjct: 305 RVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGG 364
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
L E G + F M + +GI+P EH CMVDLLGR G+LE+A+S I K D GAL
Sbjct: 365 LAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGAL 424
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L ACK+H N EL E A+ L+ +G LL+N Y+S GKWK++ V+ + E +
Sbjct: 425 LSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIE 484
Query: 481 KSPGCSWI 488
K PGCS I
Sbjct: 485 KEPGCSSI 492
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 228/392 (58%), Gaps = 12/392 (3%)
Query: 98 GVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA-ERNVISWSAMVA 156
GV + FT S+V+ ACA + SL + A M E +V+ +A+V
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQG-----------KQAHNYIIKMGFESDVVVQTALVH 53
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
YA CG+++ A +D+M+E+++ TW AMI G+ + ++++A K+F E+SE D W A+
Sbjct: 54 MYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAV 113
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y QNGY ++ ++ MR+ ++ M +SAC L +E+ +V +
Sbjct: 114 IAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGF 173
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
V +AL+ M++K G ++ A + F ++ ++ +S++S+IT A HG+ +A+ +F +
Sbjct: 174 ALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQ 233
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M GI+PN+++F+GVL+ACSH GLV +G F LMT+ +GI P H TCM+DLLGR+G
Sbjct: 234 MLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAG 293
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L++A + I D WGALLGAC++H N EL + A HLL + + G LL+N
Sbjct: 294 CLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSN 353
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
IYA+ G+W D+ V+ ++ + K PG SWI
Sbjct: 354 IYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWI 385
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----------- 119
WT++I + + + +S+ ++ +M + G+ + F SVL+ACA + +L
Sbjct: 110 WTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVV 169
Query: 120 -----LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L+ V+ Y K G M+DA ++FD M +RN +SW++++ G A G A
Sbjct: 170 QSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVL 229
Query: 170 FYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFDEISE-----PDASCWAAMTVCY 220
+++M + N +++V +++ G V E + F+ +++ PD S + M
Sbjct: 230 LFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLL 289
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQLGDVEMAAILAKHV 271
+ G A M E +V++ GA + AC G+ E+A +A+H+
Sbjct: 290 GRAGCLDEAENFINGMPVE----PDVSVWGALLGACRIHGNTELAKRIAEHL 337
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 57 QVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV 116
QVFD++P+ + + W S+I H ++LL+ +M + G+ + +F VL+AC+
Sbjct: 198 QVFDKMPQ-RNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHT 256
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAER-----NVISWSAMVAGYANCGNMKAAKEFY 171
GL+++ + F+ M + +V ++ M+ G + A+ F
Sbjct: 257 --------------GLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302
Query: 172 DRM-TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD---ASCWAAMTVCYVQNGYAK 227
+ M E + W A++ G AK++ + + + A + ++ Y G
Sbjct: 303 NGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWD 362
Query: 228 AAIEMYKVMRQENV 241
A ++ K+M+ V
Sbjct: 363 DAAKVRKLMKDRGV 376
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 254/486 (52%), Gaps = 66/486 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ ARQVFD++P+ ++ W +++ + + Q++ L +M LG + TF S+L
Sbjct: 96 HVASARQVFDEMPQ-RSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSIL 154
Query: 111 NACARVPS-----LLEAVICGYTKIG--------------------LMDDAQRLFDSMAE 145
+ + + S L +++ C K+G LMD+A+++FD M E
Sbjct: 155 SGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDE 214
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG------------- 188
+++ISW+ M+ GY G+ A + +M + + V ++ +I+G
Sbjct: 215 KSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSV 274
Query: 189 ----------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
Y KCG + A+++FD I E W +M YV G+
Sbjct: 275 HSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHP 334
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
A+++++ M + ++R + + +SAC LG + + + +++ + V +L
Sbjct: 335 GEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSL 394
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN-EGIEPN 345
IHM+SKCG + A F R+ +KD+ ++SMI ++A HG EA+ +F KM EGI P+
Sbjct: 395 IHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPD 454
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+ + V ACSH GLVE+G K F+ M + FGI P EH TC++DLLGR GQL+ A + I
Sbjct: 455 AIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAI 514
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
A WG LL AC++H N ELGE+A LL+ P +G+ L+AN+Y S+GKWK
Sbjct: 515 QGMPPDVQAQVWGPLLSACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWK 574
Query: 466 DSEIVK 471
++ +++
Sbjct: 575 EAHMMR 580
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 197/426 (46%), Gaps = 66/426 (15%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---- 121
++ + W +IR+ + F Q++ +Y+ M GV + T+ +L ACA +PS+
Sbjct: 9 RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68
Query: 122 -----------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
A++ Y+K + A+++FD M +R+V+SW+AMV+ Y+ +M
Sbjct: 69 HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSM 128
Query: 165 KAA----KEFYDRMTEKNSVTWVAMIAGYG-------------------KCGEV------ 195
A KE + E + T+V++++GY K G V
Sbjct: 129 DQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSL 188
Query: 196 --------------REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
EA+KVFD + E W M YV+ G+A A ++ M+ ++V
Sbjct: 189 ANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSV 248
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
I V + IS C Q+ D+ +A+ + V + C+ + V N LI M++KCG L A R
Sbjct: 249 GIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARR 308
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F I K ++S++SMI + G EALD+F +M I PN T V++AC+ G
Sbjct: 309 IFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGS 368
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ G ++ E + G++ + T ++ + + G + KA + D D W +++
Sbjct: 369 LSIG-QEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTD-KDLTVWTSMI 426
Query: 422 GACKVH 427
+ +H
Sbjct: 427 NSYAIH 432
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 19 VHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNH 78
VHS +LK D LI + G NL+ AR++FD I + K+ WTS+I +
Sbjct: 274 VHSLVLKCGCNEKDPVE---NLLITMYAKCG-NLTSARRIFDLIIE-KSMLSWTSMIAGY 328
Query: 79 VLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL--------------LEA-- 122
V H +++ L+ +M R + +G T ++V++ACA + SL LE+
Sbjct: 329 VHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQ 388
Query: 123 -----VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE- 176
+I Y+K G + A+ +F+ + ++++ W++M+ YA G A + +MT
Sbjct: 389 QVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTA 448
Query: 177 ----KNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
+++ + ++ G V E K F + +
Sbjct: 449 EGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQK 483
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 265/536 (49%), Gaps = 101/536 (18%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A +F +P+ + Q W S++ H +++ +A MH+ G + + ++F+SVL+
Sbjct: 102 LDEADSLFRSMPE-RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 112 AC----------------ARVPSLLE-----AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC A+ P L + A++ Y+K G ++DAQR+FD M +RNV+S
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG------------------ 188
W++++ + G A + + M E + VT ++I+
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 189 ------------------YGKCGEVREAKKVFD--------------------------- 203
Y KC ++EA+ +FD
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 204 ----EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+++E + W A+ Y QNG + A+ ++ ++++E+V + + + AC L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 260 DVEMAAILAKHV-------DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
++ + HV G D +V N+LI M+ KCG ++ + F ++ +D +
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDI-FVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S+++MI FA +G EAL++F +M G +P+ +T IGVL+AC H G VE+G F M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
TR FG+ PL +H TCMVDLLGR+G LE+A S+I + D+ WG+LL ACKVH N L
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
G+ A LLE+ P +G LL+N+YA +GKW+D V+ + + K PGCSWI
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 137/261 (52%), Gaps = 9/261 (3%)
Query: 97 LGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
L T F+ +L++C + S L A+ Y ++ S + + ++
Sbjct: 13 LSSFTDSSPFAKLLDSC--IKSKLSAIYVRYVHASVIK-------SGFSNEIFIQNRLID 63
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
Y+ CG+++ ++ +D+M ++N TW +++ G K G + EA +F + E D W +M
Sbjct: 64 AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
+ Q+ + A+ + +M +E ++E + +SAC+ L D+ + + +
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF 183
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
Y+ +AL+ M+SKCG ++ A R F + +++V+S++S+IT F +G + EALD+F
Sbjct: 184 LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQM 243
Query: 337 MRNEGIEPNQVTFIGVLTACS 357
M +EP++VT V++AC+
Sbjct: 244 MLESRVEPDEVTLASVISACA 264
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 275/488 (56%), Gaps = 20/488 (4%)
Query: 5 YLVPRSKTFNQLKQVHSYLL--KTLTKPHDQYHYYAQFLIRLLQLPGD--NLSYARQVFD 60
+L+ + +T +Q+KQ+ ++L TL P Y A +I L + +LS+A ++F
Sbjct: 15 FLLDKCRTISQIKQIQTHLTVSGTLKDP-----YAAAKIISFCALSSNQFSLSHAYRLFL 69
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
+ + ++ F+W ++IR R++I+L+ M L + +T+S + AC + +L
Sbjct: 70 GL-RHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNLY 128
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+ C I L +D + + +V +A G M +A++ +D + ++ +
Sbjct: 129 LGLACHCQSIKL---GWEFYDFVQ-------NGLVHMFAIFGCMDSARKLFDLSSNRDVI 178
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
TW A+I GY + G+V +++FD++ E ++ W+AM YV+ G+ + A+E++ M
Sbjct: 179 TWTALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISG 238
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+ +V AI+AC LG ++ + ++ D + ALI M++KCG +++A
Sbjct: 239 FWPNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIAC 298
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F ++N+DV Y+ +I+ A+HG+S A+++F +M +EG+ PN+VTF+ VL ACS G
Sbjct: 299 SIFGELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMG 358
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LV+ G + FE M++++G +P +H C+VDLLGR+G+LE+A L+ + D+ GAL
Sbjct: 359 LVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGAL 418
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L A +V+ + ELGE L +L + +G +L+N+YAS KW + V+ + + + +
Sbjct: 419 LNASRVYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVR 478
Query: 481 KSPGCSWI 488
K PGCS I
Sbjct: 479 KVPGCSLI 486
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 262/531 (49%), Gaps = 65/531 (12%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
+VH YL+K +D + A L+ + G + A VF +IPK W ++I
Sbjct: 209 KVHGYLIKL---GYDSDPFSANALLDMYAKSGCPEA-AIAVFYEIPKPDI-VSWNAVIAG 263
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV-------------------PS 118
VLH ++ L KM V S FT SS L ACA + P
Sbjct: 264 CVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPD 323
Query: 119 LLEAV--ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG-NMKAAKEF---YD 172
V I Y+K GL+ DA+ +FD M ++VI W+++++GY+NCG +++A F Y
Sbjct: 324 SFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYK 383
Query: 173 RMTEKNSVT---------------------------------WVA--MIAGYGKCGEVRE 197
E N T +VA ++ YGKC + +
Sbjct: 384 EGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLED 443
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A KVF+ D + +M Y Q G + A++MY M+ +++ +AC
Sbjct: 444 AAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACAN 503
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
L E + HV + + N+L++M++KCG +D A F+ I + ++S+S+M
Sbjct: 504 LSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAM 563
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I A HG ++AL +F +M GI PN +T + VL+AC+H GLV + + F LM ++FG
Sbjct: 564 IGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFG 623
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I P EH CMVD+LGR G+L++A L+ + A WGALLGA ++H N ELG AA
Sbjct: 624 ITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAA 683
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL L PEK+G LLANIYAS G W + V+ + + KK PG SWI
Sbjct: 684 EMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWI 734
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 188/445 (42%), Gaps = 47/445 (10%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
W++LI +V + +++L Y +M+ LG + FTFSSVL C SL + G +I
Sbjct: 116 WSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGC----SLTRNLELG-KQI 170
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGN----MKAAKEFYDRMTEKNSVTWVAMI 186
+ + + N S S ++ A + MK + + + A++
Sbjct: 171 HRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALL 230
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
Y K G A VF EI +PD W A+ V + A+++ M V S
Sbjct: 231 DMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMF 290
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+ A+ AC +G V++ L + + + ++V LI M+SKCG L A F +
Sbjct: 291 TLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL--TACSHG----- 359
KDVI ++S+I+ +++ G EA+ +F M EG+E NQ T +L TA S
Sbjct: 351 PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE 410
Query: 360 ---------GLVEDG------------CKQFELMTRVFGIKPLTEHL--TCMVDLLGRSG 396
G DG C E +VF + P + + T M+ + G
Sbjct: 411 QVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYG 470
Query: 397 QLEKAHSLIMDYKDF---CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK---TGN 450
E+A + + +D DA + +L AC E G+ H+L+ G GN
Sbjct: 471 LGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGN 530
Query: 451 SALLANIYASMGKWKDSEIVKMMIS 475
S L N+YA G D+ + IS
Sbjct: 531 S--LVNMYAKCGSIDDASCIFNEIS 553
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 42/273 (15%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y KC R A+K+ + SEPD W+A+ YVQNG + A+ Y M + +E
Sbjct: 92 YSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTF 151
Query: 249 VGAISACTQLGDVEMA------AILAKHVDEGCC-------------------------- 276
+ C+ ++E+ A++ + + G
Sbjct: 152 SSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVH 211
Query: 277 --------DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
D + +NAL+ M++K G + A F I D++S++++I H K+
Sbjct: 212 GYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKND 271
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
AL + KM + + P+ T L AC+ GLV+ G +Q ++P + +
Sbjct: 272 LALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLG-RQLHSALMKMDMEPDSFVGVGL 330
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+D+ + G L+ A ++ D D W +++
Sbjct: 331 IDMYSKCGLLQDAR-MVFDLMPXKDVIVWNSII 362
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
++++SKC +A + D++S+S++I+ + +G+ +EAL + +M G + N+
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 347 VTFIGVLTACS 357
TF VL CS
Sbjct: 149 FTFSSVLKGCS 159
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 245/494 (49%), Gaps = 62/494 (12%)
Query: 55 ARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
AR VFD + C + W ++I + ++ ++ KM + G + T+ S+LN
Sbjct: 288 ARLVFDGM--CDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTH 345
Query: 114 ARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+ + A + Y + G +DDAQ +FD +A RNV +W+
Sbjct: 346 VSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWN 405
Query: 153 AMVAGYAN--CG--------NMKAAKEFYDRMTEKN---------SVTWV---------- 183
AM+ G A CG M+ F D T N ++ WV
Sbjct: 406 AMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDA 465
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
A++ Y KCG AK+VFD++ E + + W M Q+G A ++
Sbjct: 466 GLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFL 525
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M +E + V +SAC G +E + H V NAL+HM++KCG
Sbjct: 526 QMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCG 585
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+D A R F + +DV S++ MI A HG+ +ALD+F+KM+ EG +PN +F+ VL+
Sbjct: 586 SVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLS 645
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV++G +QF +T+ +GI+P EH TCMVDLLGR+GQLE+A I++
Sbjct: 646 ACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGD 705
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
WGALLGAC + N E+ E AA+ L+L P+ LL+NIYA+ G W+ +V+ M+
Sbjct: 706 APWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMM 765
Query: 475 SETEKKKSPGCSWI 488
+K PG SWI
Sbjct: 766 QRRGIRKEPGRSWI 779
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 192/438 (43%), Gaps = 72/438 (16%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VFD + + + F WT +I H +++ L+ +M R G L + T+ S+LNA A
Sbjct: 185 ARVVFDGMVE-RDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASA 243
Query: 115 RVPS-----------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISW 151
+ + A+I Y K G +DDA+ +FD M +R+VISW
Sbjct: 244 ITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISW 303
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVT-------------------WV--------- 183
+AM+ G A G A + +M ++ V WV
Sbjct: 304 NAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVE 363
Query: 184 -----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
A + Y +CG + +A+ +FD+++ + + W AM Q + A+ +
Sbjct: 364 VGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSL 423
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH---VDEGCCDRTNYVSNALIHM 289
+ MR+E V +SA +G+ + + H +D G D V NAL+HM
Sbjct: 424 FLQMRREGFFPDATTFVNILSA--NVGEEALEWVKEVHSYAIDAGLVDLR--VGNALVHM 479
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG A + F + ++V +++ MI+ A HG EA +FL+M EGI P+ T+
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ +L+AC+ G +E K+ G+ +V + + G ++ A + D
Sbjct: 540 VSILSACASTGALE-WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDML 598
Query: 410 DFCDAGTWGALLGACKVH 427
+ D +W ++G H
Sbjct: 599 ER-DVYSWTVMIGGLAQH 615
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 176/412 (42%), Gaps = 64/412 (15%)
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL------------- 120
+I + + + ++ +Y++M R G + T+ S+L AC SL
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 121 --------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
A++ Y K G +DDAQ +FD M ERNVISW+ M+ G A+ G + A +
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 173 RMTEK----NSVTWV-----------------------------------AMIAGYGKCG 193
+M + NS T+V A++ Y K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV--RISEVAMVGA 251
+ +A+ VFD + E D W M Q+G + A ++ M + ++ +
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
SA T G +E + KH + V NALIHM++KCG +D A F + ++DV
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
IS+++MI A +G EA +FLKM+ EG P+ T++ +L G E K+
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE-WVKEVHK 359
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G+ + V + R G ++ A LI D + TW A++G
Sbjct: 360 HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQ-LIFDKLAVRNVTTWNAMIGG 410
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
Y + GYA+ A+++Y MR+E + +E+ + + AC ++ + H+ +
Sbjct: 5 YAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSD 64
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
V AL++M+ KCG +D A F ++ ++VIS++ MI A +G+ QEA FL+M+
Sbjct: 65 VRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQR 124
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
EG PN T++ +L A + G +E K+ G+ +V + +SG ++
Sbjct: 125 EGFIPNSYTYVSILNANASAGALE-WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSID 183
Query: 400 KAHSLIMDYKDFCDAGTWGALLGACKVH 427
A ++ D D +W ++G H
Sbjct: 184 DAR-VVFDGMVERDIFSWTVMIGGLAQH 210
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 125/288 (43%), Gaps = 47/288 (16%)
Query: 16 LKQVHSYLLKT----LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
+K+VHSY + L + H YA+ N YA+QVFD + + + W
Sbjct: 455 VKEVHSYAIDAGLVDLRVGNALVHMYAKC---------GNTMYAKQVFDDMVE-RNVTTW 504
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL----------- 120
T +I H ++ L+ +M R G++ T+ S+L+ACA +L
Sbjct: 505 TVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVN 564
Query: 121 ----------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
A++ Y K G +DDA+R+FD M ER+V SW+ M+ G A G A +
Sbjct: 565 AGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDL 624
Query: 171 YDRMT----EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-----EPDASCWAAMTVCYV 221
+ +M + N ++VA+++ G V E ++ F ++ EP + M
Sbjct: 625 FVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLG 684
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
+ G + A M E A++G AC G++EMA AK
Sbjct: 685 RAGQLEEAKHFILNMPIEPGDAPWGALLG---ACVTYGNLEMAEFAAK 729
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 233/403 (57%), Gaps = 10/403 (2%)
Query: 86 QSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE 145
+I LY ++ G+ ++ SVL A ++ ++ ++G Q + S +
Sbjct: 105 NAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAV---------EVGRQIHTQTV-SSALD 154
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+V ++++ Y++CG + A++ +D + K+ W AM+AGY K GE++ A+KVF+E+
Sbjct: 155 MDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEM 214
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
+ + W + Y Q AIE+++ M+ E V E+AM+ +SAC LG +E+
Sbjct: 215 PQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGE 274
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
+ ++++ R + NALI M++K G + A F +K K VI++S++I A A HG
Sbjct: 275 WIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHG 334
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
EA+DMFL+M + PN+VTF+ +L+ACSH G+V+ G F+ M ++ I+P EH
Sbjct: 335 LGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHY 394
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
CM+DLL R+G L++A L+ D +A WG+LL A H +AEL ++A +HL +L P
Sbjct: 395 GCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKLEP 454
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+GN LL+N YA++GKW +S V+ ++ KK+PG S I
Sbjct: 455 GNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVI 497
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 110/261 (42%), Gaps = 33/261 (12%)
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A +F + PD + + AI +Y +R + +R ++ + A +
Sbjct: 75 AFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVK 134
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY---------------------- 295
L VE+ + D V+ +LI M+S CG+
Sbjct: 135 LSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAM 194
Query: 296 ---------LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
L A + F+ + ++VIS++++I +A + EA+++F KM+ E +EP++
Sbjct: 195 VAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDE 254
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+ + VL+AC+ G +E G + + G+ + ++D+ +SG + +A +
Sbjct: 255 IAMLAVLSACADLGALELGEWIHNYIEK-HGLCRIVSLYNALIDMYAKSGNIRRALEVFE 313
Query: 407 DYKDFCDAGTWGALLGACKVH 427
+ K TW ++ A +H
Sbjct: 314 NMKQ-KSVITWSTVIAALALH 333
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 36/251 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR+VF+++P+ + WT+LI + ++I L+ KM V +VL+
Sbjct: 204 LKSARKVFNEMPQ-RNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLS 262
Query: 112 ACA---------------------RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
ACA R+ SL A+I Y K G + A +F++M +++VI+
Sbjct: 263 ACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVIT 322
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
WS ++A A G A + + RM N VT+VA+++ G V + FD++
Sbjct: 323 WSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQ 382
Query: 207 -----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG-D 260
EP + M + GY + A ++ M E + + G++ A + D
Sbjct: 383 SMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE----ANAMIWGSLLAASNTHRD 438
Query: 261 VEMAAILAKHV 271
E+A + KH+
Sbjct: 439 AELAQLALKHL 449
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 248/440 (56%), Gaps = 7/440 (1%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ AR VF+++ K +W ++I +V ++ L+ +M V FTF+SVL
Sbjct: 243 DVGAARSVFEEV-DVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVL 301
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+ACA G + G + Q F + E + +A+V Y+ CGN+ A+
Sbjct: 302 SACANAGFFAH----GKSVHGQITRLQPNF--VPEAALPVNNALVTLYSKCGNIAVARRI 355
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D M K+ V+W +++GY + + +A +VF+E+ + W M YV G+++ A+
Sbjct: 356 FDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDAL 415
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+++ MR E+V+ + GAISAC +LG ++ L H+ + + +N NALI M+
Sbjct: 416 KLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMY 475
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
++CG + A F + N D +S+++MI+A HG +EAL++F +M EGI P++++F+
Sbjct: 476 ARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFL 535
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
VLTAC+H GLV++G + FE M R FGI P +H T ++DLLGR+G++ +A LI
Sbjct: 536 TVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPF 595
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
W A+L C+ + ELG AA L ++ P+ G LL+N Y++ G+W D+ V
Sbjct: 596 EPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARV 655
Query: 471 KMMISETEKKKSPGCSWISS 490
+ ++ + KK PGCSWI +
Sbjct: 656 RKLMRDRGVKKEPGCSWIEA 675
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 191/425 (44%), Gaps = 68/425 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG------FT 105
L A FD +P+ + +++ N V+ A+ R S A +L SG ++
Sbjct: 104 LPAAVSFFDAVPQARRD----TVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYS 159
Query: 106 FSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS-AMVAGYANCGNM 164
F+++L+A +P++ C + ++ V+S S A+VA Y C +
Sbjct: 160 FTALLSAAGHLPNI-SVRHCAQLQCSVLKSGAG--------GVLSVSNALVALYMKCEAL 210
Query: 165 KA---AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
+A A++ D M +K+++TW M+ GY + G+V A+ VF+E+ W AM YV
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV--------EMAAILAKHVDE 273
+G A E+++ M E V + E +SAC G ++ + V E
Sbjct: 271 HSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPE 330
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS----------------- 316
V+NAL+ ++SKCG + +A R F +K+KDV+S+++
Sbjct: 331 AALP----VNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEV 386
Query: 317 --------------MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
M++ + G S++AL +F +MR E ++P T+ G ++AC G +
Sbjct: 387 FEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSL 446
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
+ G KQ G + ++ + R G +++A+ + + + D+ +W A++
Sbjct: 447 KHG-KQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNI-DSVSWNAMIS 504
Query: 423 ACKVH 427
A H
Sbjct: 505 ALGQH 509
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 143/357 (40%), Gaps = 43/357 (12%)
Query: 80 LHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRL 139
LHA S LL+A H P L +I YT G + A L
Sbjct: 43 LHARLLTSALLHAPPH---------------------PHLTLRLIHLYTLSGDLPAAATL 81
Query: 140 FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE--KNSVTWVAMIAGYGKCGEVRE 197
F A+ ++ +++VA YA G + AA F+D + + +++V A+I+ Y +
Sbjct: 82 F--RADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAP 139
Query: 198 AKKVFDEI-----SEPDASCWAAM--TVCYVQNGYAKAAIEMY-KVMRQENVRISEV--A 247
A VF + PD + A+ ++ N + ++ V++ + V A
Sbjct: 140 AVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNA 199
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+V C L A A+ V + D+ ++ + + G + A F +
Sbjct: 200 LVALYMKCEAL----EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVD 255
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
K + +++MI+ + G EA ++F +M E + ++ TF VL+AC++ G G
Sbjct: 256 VKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKS 315
Query: 368 QFELMTRV---FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+TR+ F + +V L + G + A I D D +W +L
Sbjct: 316 VHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARR-IFDNMKSKDVVSWNTIL 371
>gi|222617104|gb|EEE53236.1| hypothetical protein OsJ_36137 [Oryza sativa Japonica Group]
Length = 542
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 248/478 (51%), Gaps = 26/478 (5%)
Query: 37 YAQFLIRLLQLPG----------DNLSYARQVFDQIPKCKTQ-FLWTSLIRNHVLHAHFR 85
+A LIR L LP + +AR VFD +P +LWT+ I + HA
Sbjct: 31 HAHLLIRGLPLPARAAVALVASSSSPRHARAVFDSVPAASANVYLWTATISAYARHASSS 90
Query: 86 ---------QSILLYAKMHRLGVLTSGFTFSSVLNAC--ARVPSLLEA----VICGYTKI 130
+++ L+A M G + FT +SV+ C R LL A V +
Sbjct: 91 SSHALEVAGEAVALFALMLWSGPRPNAFTVTSVIKCCLEGRAGLLLRARGRCVARSVREY 150
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
+ D M +NV+ + MVA G+M AA+E +D M E++ ++W +++GY
Sbjct: 151 WPGGRCKEGVDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGMAERDPISWNTLMSGYL 210
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
G+ +++FDE++ + + W M + G ++++ MR M
Sbjct: 211 HLGDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRMRATGFEPDAATMAV 270
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+SAC QLG + +A + + + C + +V N+LI M++KCG + A F+ KD
Sbjct: 271 LMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQFLFTETYPKD 330
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+SY+ MI AFA HG +++ALD+F M + G++P+ VTF+GVL+AC+H GLVE G FE
Sbjct: 331 TVSYNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSACAHAGLVEYGKNYFE 390
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
LM + ++ +H C+VDL GR+G +E+AH + AG WGALL AC+ H +
Sbjct: 391 LMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHAGVWGALLNACRKHCHV 450
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
++GEIAA+ L+ + P+ GN LL N A +W E V++ + K+ GCSW+
Sbjct: 451 DVGEIAAKELIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQLSMRRKVIDKTAGCSWV 508
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 263/488 (53%), Gaps = 24/488 (4%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R T LKQ+H++ + T ++ L+R L L YAR++FD P
Sbjct: 19 RCATLAHLKQLHAHAVVTGRAAAQTTTFH---LLRFASLRLSCLPYARRLFDATPS-PNV 74
Query: 69 FLWTSLIRNHVL-----HAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNA-CARVPSLLE 121
FL+++++ + H R S+ L+ +M R G + F + VL A CA L+
Sbjct: 75 FLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAACAIGVQLVR 134
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++ C K D + I ++++ GY+ G M A++ +D +T++N V+
Sbjct: 135 SIHCHACK-----------DGFYGHDFIR-TSLLDGYSRYGMMGDARKLFDGLTDRNVVS 182
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W A+++GY + G+V +A +F+ + + D W A+ QNG A+ +++ M E
Sbjct: 183 WTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGF 242
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
R + + +SAC LG +++ ++ + C + V N LI M+ KCG L A
Sbjct: 243 RPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKW 302
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F ++ + +++S+I A HG S+ A+ +F MRNEG++P++VTF+G+L AC+HGG
Sbjct: 303 IFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGF 362
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + FELM GI+P EH C+VDLL R+G+ + A + I D K D WG+LL
Sbjct: 363 VDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLL 422
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SEIVKMMISETEKK 480
AC++H + EL E A R+LL+L P +LAN+Y+ G W++ ++ K+M + K
Sbjct: 423 NACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGK 482
Query: 481 KSPGCSWI 488
K PGCSWI
Sbjct: 483 KLPGCSWI 490
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/569 (29%), Positives = 271/569 (47%), Gaps = 95/569 (16%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
K+ N +KQ+H+++L+T+ + + NLSYA +F I +
Sbjct: 26 KSLNHIKQLHAHILRTVI----NHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPESIV 81
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV------- 123
+ SL+R+ R +IL Y ++ +G +F +L A ++V +L E +
Sbjct: 82 FNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAF 141
Query: 124 -------------------ICG--------------------------YTKIGLMDDAQR 138
CG Y + GL+D+A +
Sbjct: 142 KIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFK 201
Query: 139 LFDSMAERNVIS---------------------------------------WSAMVAGYA 159
LF+ M + NV+ +A+V YA
Sbjct: 202 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYA 261
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
G M A EF+ +M+ +N AM++GY K G + +A+ +FD+ D CW M
Sbjct: 262 GAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISA 321
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
Y ++ + + A+ +++ M ++ V M+ ISAC LG ++ A + ++ +
Sbjct: 322 YAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESV 381
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
+ NALI+M++KCG LD A F ++ ++V+S+SSMI AFA HG++ ++L +F +M+
Sbjct: 382 LPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQ 441
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
E +EPN+VTF+GVL CSH GLVE+G K F MT + I P EH CMVDL GR+ L
Sbjct: 442 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLR 501
Query: 400 KAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYA 459
+A +I + WG+L+ AC+VH ELGE+AA+ +L+L P+ G L++NIYA
Sbjct: 502 EALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYA 561
Query: 460 SMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+W I++ ++ + + K G S I
Sbjct: 562 REYRWDYVRIIRWIMEKKKVFKEKGLSRI 590
>gi|147834109|emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]
Length = 560
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 271/549 (49%), Gaps = 68/549 (12%)
Query: 3 SKYLVPRSKTFNQL---KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVF 59
SK L SK L K++H+++++ +YA ++R + D L AR +F
Sbjct: 12 SKLLFELSKIHQSLPRTKKLHAFIIRNHLSDDP---FYATRILRFYAINSD-LCSARNLF 67
Query: 60 DQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV--P 117
D ++ +LW S+IR + F ++LL+AKM R + FTF+ VL ACA P
Sbjct: 68 DGTSH-RSVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDP 126
Query: 118 SLL-------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
L A++ Y+K+ ++D+A R+F MAE++++ W+AM AGY
Sbjct: 127 DGLRVVHGGVVVSGLGFDSVCGSALVTAYSKLCMVDEASRVFYGMAEQDLVLWNAMAAGY 186
Query: 159 ANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG-------------------------- 188
CG + + M + +S T V +I+G
Sbjct: 187 GYCGFWDKGLQLFSAMRSMGEQPDSYTMVGLISGLADPNLLGIGKGIHGFCLKSSFDCNA 246
Query: 189 ---------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
Y +C + A VF +S+PD W+A+ ++G + A+ ++ M E
Sbjct: 247 HVGSALVSMYSRCHCLNSAYGVFTILSQPDLVTWSALITGLSKSGDYEKALLFFRKMNME 306
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
R+ + + ++A Q + + + +V + +S+ALI M+SKCG+++L
Sbjct: 307 GKRVDPILIXSVLAASGQSAILGPGSEIHGYVLRHGLESEVMISSALIDMYSKCGFVNLG 366
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
R F + N++ +SY+SMI HG + +A MF ++ +G +P++ TF +L C H
Sbjct: 367 VRVFDSMPNRNTVSYNSMILGLGIHGLAXQAFKMFEEVLEKGFKPDESTFSALLCTCCHA 426
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV DG + F MT F I+ TEH MV LLG +G+L++A+ LI+ + D+G WGA
Sbjct: 427 GLVNDGREIFSRMTEEFHIQARTEHYVHMVKLLGMAGELQEAYDLILSLQQPADSGIWGA 486
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL C H N+EL I A+ L E PEK+ +L+NIYA +W D + ++ I E
Sbjct: 487 LLSCCNFHGNSELAXIVAQQLFENKPEKSAYRVMLSNIYAGDXRWDDVKKLRDDIQEAGI 546
Query: 480 KKSPGCSWI 488
KK PG SWI
Sbjct: 547 KKMPGLSWI 555
>gi|115474659|ref|NP_001060926.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|42408463|dbj|BAD09644.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50725835|dbj|BAD33365.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113622895|dbj|BAF22840.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|215704880|dbj|BAG94908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712334|dbj|BAG94461.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 674
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 255/462 (55%), Gaps = 29/462 (6%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++S AR+VFD +P+ + WTS+IR +V R +LL+ M R GV + T S L
Sbjct: 210 SVSEARRVFDAMPE-RNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVAL 268
Query: 111 NACA---------RVPSLL------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA ++ +L+ +++I Y++ G M DA+R FD M +++++
Sbjct: 269 DACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIV 328
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
SW++++ GY ++ A + M +K++V+W +M+ G+ G +RE+ ++F+++ D
Sbjct: 329 SWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKD 388
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILA 268
W A+ ++ NG +A+ + M QE + + +A +SA L + A
Sbjct: 389 EVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHA 448
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
++ G + V +L+ M++KCG L A+ FS I N +I+ +SMITAF HG +
Sbjct: 449 YSINMGWV-FDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVE 507
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
+AL +F KM+N G +PN VTF+G+LT C+ G V+ G FE M V+G++P EH TCM
Sbjct: 508 DALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCM 567
Query: 389 VDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
VDLLGR+G L +A +I M D DA W ALL A +H N +IAA+ LLE P
Sbjct: 568 VDLLGRAGLLAEALEMINSMPQNDHSDA--WAALLSASSLHSNLAFAKIAAQKLLEKDPY 625
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L+ +++S G +D E++K++ K PG S I
Sbjct: 626 DATAYTVLSRMFSSAGM-EDEEMLKVVQLSNLASKRPGYSLI 666
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 162/326 (49%), Gaps = 25/326 (7%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
G +L+ AR VFD +P+ + W +L+ ++ A R + L+ KM ++ G
Sbjct: 82 GGDLASARLVFDDMPR-RNAPSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYG----- 135
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKA 166
A+I G K ++ +A+ +++ M R+ + +A++AGY G +
Sbjct: 136 -------------AIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGELAM 182
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A ++ MT ++ ++W AM+ G K G V EA++VFD + E + W +M YV+ G
Sbjct: 183 ALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMC 242
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ + ++ MR+E V+++ + A+ AC + + + ++ +++
Sbjct: 243 RDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSI 302
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+S+ G++ A R F ++ KD++S++S+IT + H +EA +F M + +
Sbjct: 303 IIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQK----DA 358
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELM 372
V++ ++ ++ G + + + FE M
Sbjct: 359 VSWTSMVVGFANRGWMRESVELFEQM 384
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 12/256 (4%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
L A++ Y + G + DAQ LFD M R+VISW+A++ YA+ G++ +A+ +D M +N+
Sbjct: 41 LNALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNA 100
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W A+++ Y + R A +F ++ +A + A+ +G AKA + + E
Sbjct: 101 PSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAII-----SGLAKAEMLHEAELVYE 155
Query: 240 NVRISEVAMVGA---ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ VG+ ++ ++G++ MA V EG R +A++ K G +
Sbjct: 156 EMPWQWRDPVGSNALMAGYLRVGELAMAL----RVFEGMTVRDVISWSAMVDGLCKHGSV 211
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
A R F + ++V+S++SMI + G ++ L +FL MR EG++ N T L AC
Sbjct: 212 SEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDAC 271
Query: 357 SHGGLVEDGCKQFELM 372
+ L +G + L+
Sbjct: 272 AAASLAREGIQIHNLI 287
>gi|325260820|gb|ADZ04639.1| hypothetical protein [Oryza glaberrima]
Length = 674
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 255/462 (55%), Gaps = 29/462 (6%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++S AR+VFD +P+ + WTS+IR +V R +LL+ M R GV + T S L
Sbjct: 210 SVSEARRVFDAMPE-RNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVAL 268
Query: 111 NACA---------RVPSLL------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA ++ +L+ +++I Y++ G M DA+R FD M +++++
Sbjct: 269 DACAVASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIV 328
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
SW++++ GY ++ A + M +K++V+W +M+ G+ G +RE+ ++F+++ D
Sbjct: 329 SWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKD 388
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILA 268
W A+ ++ NG +A+ + M QE + + +A +SA L + A
Sbjct: 389 EVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHA 448
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
++ G + V +L+ M++KCG L A+ FS I N +I+ +SMITAF HG +
Sbjct: 449 YSINMGWVFDSA-VHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVE 507
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
+AL +F KM+N G +PN VTF+G+LT C+ G V+ G FE M V+G++P EH TCM
Sbjct: 508 DALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCM 567
Query: 389 VDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
VDLLGR+G L +A +I M D DA W ALL A +H N +IAA+ LLE P
Sbjct: 568 VDLLGRAGLLAEALEMINSMPQNDHSDA--WAALLSASSLHSNLAFAKIAAQKLLEKDPY 625
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L+ +++S G +D E++K++ K PG S I
Sbjct: 626 DATAYTVLSRMFSSAGM-EDEEMLKVVQLSNLASKRPGYSLI 666
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 162/326 (49%), Gaps = 25/326 (7%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
G +L+ AR VFD +P+ + W +L+ ++ A R + L+ KM ++ G
Sbjct: 82 GGDLASARLVFDDMPR-RNAPSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYG----- 135
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKA 166
A+I G K ++ +A+ +++ M R+ + +A++AGY G +
Sbjct: 136 -------------AIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGELAM 182
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A ++ MT ++ ++W AM+ G K G V EA++VFD + E + W +M YV+ G
Sbjct: 183 ALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMC 242
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ + ++ MR+E V+++ + A+ AC + + + ++ +++
Sbjct: 243 RDGLLLFLNMRREGVQVNTTTLSVALDACAVASLAREGIQIHNLIISMGFELDIFLGDSI 302
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+S+ G++ A R F ++ KD++S++S+IT + H +EA +F M + +
Sbjct: 303 IIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQK----DA 358
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELM 372
V++ ++ ++ G + + + FE M
Sbjct: 359 VSWTSMVVGFANRGWMRESVELFEQM 384
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 12/256 (4%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
L A++ Y + G + DAQ LFD M R+VISW+A++ YA+ G++ +A+ +D M +N+
Sbjct: 41 LNALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNA 100
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W A+++ Y + R A +F ++ +A + A+ +G AKA + + E
Sbjct: 101 PSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAII-----SGLAKAEMLHEAELVYE 155
Query: 240 NVRISEVAMVGA---ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ VG+ ++ ++G++ MA V EG R +A++ K G +
Sbjct: 156 EMPWQWRDPVGSNALMAGYLRVGELAMAL----RVFEGMTVRDVISWSAMVDGLCKHGSV 211
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
A R F + ++V+S++SMI + G ++ L +FL MR EG++ N T L AC
Sbjct: 212 SEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDAC 271
Query: 357 SHGGLVEDGCKQFELM 372
+ L +G + L+
Sbjct: 272 AVASLAREGIQIHNLI 287
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 247/468 (52%), Gaps = 32/468 (6%)
Query: 52 LSYARQVFDQIPKCKTQ-FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
L +R+VFD I FL +++R + L R ++ ++ M R T F + L
Sbjct: 400 LPSSRRVFDAIRDPHADAFLANTMLRAYALGGAPRDALAAFSAMPRRDSFTYSFLIKA-L 458
Query: 111 NACARVPS-----------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+A P + A+I Y+K G DA+++FD M ER+V+SW+
Sbjct: 459 SAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNT 518
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
+A G + A++ +D M EK++V+W ++ GY K GEV A ++F + E + W
Sbjct: 519 AMAAMVREGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSW 578
Query: 214 AAMTVCYVQNGYAKAAIEMYK------------VMRQENVRISEVAMVGAISACTQLGDV 261
+ M Y + G + A ++ +M++ +V + A+V ++AC + G +
Sbjct: 579 STMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSL 638
Query: 262 EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF-SRIKNKDVISYSSMITA 320
+ + ++V + R+ +V NALI M KCG ++ A F + KD +S++S+I
Sbjct: 639 SLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGG 698
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
FA HG +AL++F +M+ +G P+ VT I VL+AC+H G V++G + F M R +GI P
Sbjct: 699 FAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMP 758
Query: 381 LTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHL 440
EH CM+DLLGR G +++A LI + WG+LL AC++H N E EIA L
Sbjct: 759 QIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNEL 818
Query: 441 LELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L P GN A+L+NIYA G+W D +M + T +K+ G SW+
Sbjct: 819 SKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWV 866
>gi|115458312|ref|NP_001052756.1| Os04g0414800 [Oryza sativa Japonica Group]
gi|32479728|emb|CAE01515.1| OJ991214_12.4 [Oryza sativa Japonica Group]
gi|113564327|dbj|BAF14670.1| Os04g0414800 [Oryza sativa Japonica Group]
gi|125590342|gb|EAZ30692.1| hypothetical protein OsJ_14749 [Oryza sativa Japonica Group]
Length = 545
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 212/368 (57%), Gaps = 1/368 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A++ Y G + A+ LFD + RNV+ W+AMV GY CG+++ A++ +D M E+
Sbjct: 176 AIVTAYVNSGDILTARELFDQIPHRNVVHWNAMVDGYVKCGDLEGARKLFDEMPERTPAA 235
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
+ ++I GY G + A+ +FD++ + D W+ M QNGY A+ ++ +++ +
Sbjct: 236 YTSLIGGYLNAGNMGAARTLFDKLEDRDLFAWSTMISGCAQNGYPGEALRIFNEFQKQEI 295
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIHMHSKCGYLDLAW 300
E+ +VG +SAC+QLG++ +A + ++ D N +V LI+M++KCG ++ A
Sbjct: 296 CPDELVIVGLMSACSQLGNITLARWIEGYIMIYPIDMNNVHVMAGLINMNAKCGNMERAT 355
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F + +DV SY SM+ HG + +A+++F +M EGI P+ F VLTACSH G
Sbjct: 356 LLFESMSVRDVFSYCSMMQGHCLHGSASKAVELFSQMLLEGITPDNAAFTVVLTACSHAG 415
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LVE+G + F++M + I P +H C+V LLGR G L A+ LI G WGAL
Sbjct: 416 LVEEGKRYFDMMKNEYMIVPSGDHYACLVSLLGRFGMLRDAYELIKSMPGEPHPGAWGAL 475
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
LG CK H + ELG+IAA+ L E+ PE GN L+NIYA++ +W + + ++
Sbjct: 476 LGGCKFHCDIELGKIAAKKLFEIEPENAGNYVSLSNIYANIDRWGNVSETRAEMTGRGIT 535
Query: 481 KSPGCSWI 488
K GC+ +
Sbjct: 536 KIAGCTLV 543
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 28/183 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ A +F+ + + F + S+++ H LH +++ L+++M G+ F+ VL
Sbjct: 350 NMERATLLFESM-SVRDVFSYCSMMQGHCLHGSASKAVELFSQMLLEGITPDNAAFTVVL 408
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI-----SWSAMVAGYANCGNMK 165
AC+ GL+++ +R FD M +I ++ +V+ G ++
Sbjct: 409 TACSHA--------------GLVEEGKRYFDMMKNEYMIVPSGDHYACLVSLLGRFGMLR 454
Query: 166 AAKEFYDRMT-EKNSVTWVAMIAGYG-----KCGEVREAKKVFDEISEPDASCWAAMTVC 219
A E M E + W A++ G + G++ AKK+F EI +A + +++
Sbjct: 455 DAYELIKSMPGEPHPGAWGALLGGCKFHCDIELGKI-AAKKLF-EIEPENAGNYVSLSNI 512
Query: 220 YVQ 222
Y
Sbjct: 513 YAN 515
>gi|116309337|emb|CAH66421.1| H0622F05.4 [Oryza sativa Indica Group]
gi|116309402|emb|CAH66479.1| OSIGBa0137L20.8 [Oryza sativa Indica Group]
Length = 545
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 212/368 (57%), Gaps = 1/368 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A++ Y G + A+ LFD + RNV+ W+AMV GY CG+++ A++ +D M E+
Sbjct: 176 AIVTAYVNSGDILTARELFDQIPHRNVVHWNAMVDGYVKCGDLEGARKLFDEMPERTPAA 235
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
+ ++I GY G + A+ +FD++ + D W+ M QNGY A+ ++ +++ +
Sbjct: 236 YTSLIGGYLNAGNMGAARTLFDKLEDRDLFAWSTMISGCAQNGYPGEALRIFNEFQKQEI 295
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIHMHSKCGYLDLAW 300
E+ +VG +SAC+QLG++ +A + ++ D N +V LI+M++KCG ++ A
Sbjct: 296 CPDELVIVGLMSACSQLGNITLARWIEGYIMIYPIDMNNVHVMAGLINMNAKCGNMERAT 355
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F + +DV SY SM+ HG + +A+++F +M EGI P+ F VLTACSH G
Sbjct: 356 LLFESMSVRDVFSYCSMMQGHCLHGSASKAVELFSQMLLEGITPDNAAFTVVLTACSHAG 415
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LVE+G + F++M + I P +H C+V LLGR G L A+ LI G WGAL
Sbjct: 416 LVEEGKRYFDMMKNEYMIVPSGDHYACLVSLLGRFGMLRDAYELIKSMPGEPHPGAWGAL 475
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
LG CK H + ELG+IAA+ L E+ PE GN L+NIYA++ +W + + ++
Sbjct: 476 LGGCKFHCDIELGKIAAKKLFEIEPENAGNYVSLSNIYANIDRWGNVSETRAEMTGRGIT 535
Query: 481 KSPGCSWI 488
K GC+ +
Sbjct: 536 KIAGCTLV 543
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/457 (33%), Positives = 250/457 (54%), Gaps = 13/457 (2%)
Query: 32 DQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLY 91
D + + I L L G ++YAR++FD + W ++ + + +S L+
Sbjct: 168 DSNLFVQKGFIHLFSLCG-LVNYARKIFDMGDGWEV-VTWNVVLSGYNRFKRYEESKRLF 225
Query: 92 AKMHRLG--VLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+M + V + T +L+AC+++ L+ C Y K + + + E N+I
Sbjct: 226 IEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGK-CIYNKY--------IKEGIVEPNLI 276
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
+A++ +A+CG M AA+ +D M ++ ++W +++ G+ + A+K FD++ E D
Sbjct: 277 LENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERD 336
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
W AM Y++ K + +++ M+ NV+ E MV ++AC LG +E+
Sbjct: 337 YVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKT 396
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
++D+ ++ NALI M+ KCG ++ A + F+ ++ KD ++++MI A++G +E
Sbjct: 397 YIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEE 456
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL MF M + P+++T+IGV+ AC+H GLV G F M GIKP H CMV
Sbjct: 457 ALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMV 516
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLGR+G L++A +IM+ ++ WG+LLGAC+VH N +L E+AA +LEL PE
Sbjct: 517 DLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGA 576
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
LL NIYA+ KWK+ V+ M+ E KK PGCS
Sbjct: 577 VYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCS 613
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 199/451 (44%), Gaps = 81/451 (17%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT-LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
L+ T ++ Q+HS +KT L+ H + + +I ++ YAR+VFD+IP+
Sbjct: 41 LLETCNTMYEINQIHSQTIKTGLSSNH---LFLTKVIIFCCTKESGDVYYARKVFDEIPQ 97
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI 124
+ F+W ++I+ + + LY M + GFTF +L + +L
Sbjct: 98 -PSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMAL----- 151
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
Y K+ L++ A + + N+ + ++ CG + A++ +D VTW
Sbjct: 152 -KYGKV-LLNHA--VIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNV 207
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+++GY + E+K++F IEM K + E V +
Sbjct: 208 VLSGYNRFKRYEESKRLF---------------------------IEMEK--KCECVSPN 238
Query: 245 EVAMVGAISACTQLGD-VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
V +V +SAC++L D V I K++ EG + + NALI M + CG +D A F
Sbjct: 239 SVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVF 298
Query: 304 SRIKNKDVISYSSMITAFADH-------------------------------GKSQEALD 332
+K +DVIS++S++T FA+ + +E L
Sbjct: 299 DEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLT 358
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG--CKQFELMTRVFGIKPLTEHLTCMVD 390
+F M+ ++P++ T + +LTAC+H G +E G K + + IK T ++D
Sbjct: 359 LFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNK---IKNDTFIGNALID 415
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ + G +EKA + + + D TW A++
Sbjct: 416 MYFKCGNVEKAKKIFNEMQK-KDKFTWTAMI 445
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 241/438 (55%), Gaps = 17/438 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +ARQ+FD++P+ + + S+I +V + L+ M R + + +++S+++
Sbjct: 138 LGFARQIFDRMPQ-RDSVSYNSMIDGYVKCGSIESASELFDLMPR--EMKNLISWNSLIS 194
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A+ E V D A +LF M E+++ISW++M+ GY G ++ AK+ +
Sbjct: 195 GYAQTS---EGV----------DIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLF 241
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D + ++ VTW MI GY K G V +AK +FD++ D + +M YVQN + A+E
Sbjct: 242 DMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALE 301
Query: 232 MYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++ M +E ++ E +V +SA QLG + A + ++ E + ALI M+
Sbjct: 302 IFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMY 361
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
SKCG + A F I+NK + +++MI A HG + A DM L++ I+P+ +TF+
Sbjct: 362 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFV 421
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
GVL ACSH GLV++G FELM R I+P +H CMVD+L RSG +E A +LI +
Sbjct: 422 GVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPI 481
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
+ W L AC H E GE+ A+HL+ + LL+N+YAS G WKD V
Sbjct: 482 EPNDVIWRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNMYASFGMWKDVRRV 541
Query: 471 KMMISETEKKKSPGCSWI 488
+ M+ E + +K PGCSWI
Sbjct: 542 RTMMKERKIEKIPGCSWI 559
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 263/502 (52%), Gaps = 44/502 (8%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLI--RLLQL-----------PGDNL 52
L+ +F+ LK +H +LL+T H + + RLL L P + L
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRT--------HLISDVFVASRLLALALCVDDSTFHKPTNLL 69
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA 112
YA +F QI + F++ LIR A ++ Y +M + + TF ++ A
Sbjct: 70 GYAYGIFSQI-QNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 128
Query: 113 CARVPSLLEAVICG------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
+E V+ G + G +D V +++V YANCG + A
Sbjct: 129 STE----MECVVVGEQTHSQIVRFGFQND------------VYVENSLVHMYANCGLIAA 172
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A + +M ++ V+W +M+AGY KCG V +A+++FDE+ + W+ M Y +N
Sbjct: 173 AGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCF 232
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ AI+++++M++E V +E MV IS+C LG +E ++V + + AL
Sbjct: 233 EKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTAL 292
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M+ +CG ++ A R F + +KD +S+SS+I A HG + +A+ F +M G P
Sbjct: 293 VDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRD 352
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+T VL+ACSHGGLV+ G + +E M R +GI+P EH C+VD+LGR+G+L +A + I+
Sbjct: 353 ITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFIL 412
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+A GALLGACK++ N E+ E L+E+ PE +G LL+NIYA G+W+
Sbjct: 413 KMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEK 472
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
E ++ ++ E KK PG S I
Sbjct: 473 LESLRDIMKEKLVKKPPGWSLI 494
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 253/485 (52%), Gaps = 38/485 (7%)
Query: 41 LIRLLQL-PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV 99
+I L L P +L YA+ +F+ F+ ++IR + ++I LY MHR +
Sbjct: 150 IISFLSLSPLGSLVYAQAIFEDTAM-DNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDI 208
Query: 100 LTSGFTFSSVLNACARVP----------------------------------SLLEAVIC 125
+ FT+ L ACARV + +++
Sbjct: 209 KSDHFTYPFGLKACARVLWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVY 268
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
Y++ G +D A+ +FD M E+ + SW+ M++ Y + +A M KN V+W +
Sbjct: 269 LYSQCGFLDLARCVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNML 328
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
IA Y + G++ +AK VF E+ E DA W +M YVQ A+ +++ M NV ++
Sbjct: 329 IARYIRLGKIEDAKVVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATD 388
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ ++ + AC + G +E+ + + + Y+SNAL+ M++KCG+L+LAW FS
Sbjct: 389 ITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFSE 448
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMF--LKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+K K + +++MI + A HG +EAL +F ++M +G PN+VTFIGVL ACSH GLV+
Sbjct: 449 LKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVD 508
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G F M + I P +H CMVDLL R G L++AH +I ++ W LLGA
Sbjct: 509 EGRTFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGA 568
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C+VH + +L E + + L ++ P + G+ LL+NIYA +W D E V+ + + K P
Sbjct: 569 CRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKP 628
Query: 484 GCSWI 488
G S I
Sbjct: 629 GSSHI 633
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 252/458 (55%), Gaps = 23/458 (5%)
Query: 54 YARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
YA Q+F QIP+ T F+W + IR ++ LYA+M V FTF VL AC
Sbjct: 59 YAVQMFAQIPQPDT-FMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKAC 117
Query: 114 ARV---------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
++ + ++ + K G + A +FD + +V++WS
Sbjct: 118 TKLFWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWS 177
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
A++AGYA G++ A++ +D M +++ V+W MI Y K GE+ A+++FDE D
Sbjct: 178 ALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVS 237
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W AM YV + + A+E++ M + EV M+ +SAC LGD + AK ++
Sbjct: 238 WNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLGDXG-EKVHAKIME 296
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ + NAL+ M++KCG + F I++KD++S++S+I A HG ++E+L
Sbjct: 297 LNKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLG 356
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F +M+ + P+++TF+GVL ACSH G V++G + F LM + I+P H C+VD+L
Sbjct: 357 LFREMQRTKVCPDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDML 416
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
R+G L++A I K +A W +LLGACKVH + EL + A LL + +++G+
Sbjct: 417 ARAGLLKEAFDFIASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYV 476
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
LL+N+YAS G+W +E V+ ++ + K+ G S++ +
Sbjct: 477 LLSNVYASHGEWDGAENVRKLMDDNGVTKTRGSSFVEA 514
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 170/422 (40%), Gaps = 88/422 (20%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+LS AR++FD++PK + W +I + H + L+ + V++
Sbjct: 188 DLSVARKLFDEMPK-RDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVS--------- 237
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE----RNVISWSAMVAGYANCGNMKA 166
A++ GY L +A LFD M E + ++ ++++ A+ G+
Sbjct: 238 ---------WNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLGD--X 286
Query: 167 AKEFYDRMTEKN-----SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
++ + ++ E N ++ A++ Y KCG + + VF I + D W ++
Sbjct: 287 GEKVHAKIMELNKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLA 346
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
+G+A+ ++ +++ M++ V E+ VG ++AC+ G+ VDEG
Sbjct: 347 FHGHAEESLGLFREMQRTKVCPDEITFVGVLAACSHTGN----------VDEGN------ 390
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNK-----DVISYSSMITAFADHGKSQEALDMFLK 336
R F +KNK ++ ++ A G +EA D
Sbjct: 391 -------------------RYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFIAS 431
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVE--------------DGCKQFELMTRVFGIKPLT 382
M+ IEPN + + +L AC G VE D + L++ V+
Sbjct: 432 MK---IEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEW 488
Query: 383 EHLTCMVDLLGRSGQLE-KAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
+ + L+ +G + + S + Y+ + LLGAC V+ + EL + LL
Sbjct: 489 DGAENVRKLMDDNGVTKTRGSSFVEAYRIEPNPVNGRTLLGACIVYGDVELAKRVNEELL 548
Query: 442 EL 443
L
Sbjct: 549 RL 550
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 263/477 (55%), Gaps = 20/477 (4%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+++HS++L +L + Q + A LI + G L YAR++F+ +P + WT +
Sbjct: 80 RRLHSHIL-SLPHSNSQPPFLANLLIEMYGKCG-RLPYARELFESMPS-RNVHTWTVAMA 136
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL---EAVICGYTKI-GL 132
+ ++++ + +M++ G TFS +L A A++ + I Y +I GL
Sbjct: 137 AFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL 196
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
+ NV+ +A+++ Y CG + A+ ++ + KNSVTW AM+ Y
Sbjct: 197 LP------------NVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLD 244
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGA 251
G REA ++F E+ + D+ CW AM Y Q+G K A+++Y+ M ++ + V
Sbjct: 245 GRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTV 304
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
I C +L ++ + V D VSNAL+HM+ KCG LD A F +K KD
Sbjct: 305 IDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDE 364
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
IS++++I+++A HG S +AL ++ +M +G++P +VTF+G+L+ACSHGGLV DG F
Sbjct: 365 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYR 424
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M IKP H C++DLLGR G+L +A ++ +A W +LLGACK H + +
Sbjct: 425 MQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLK 484
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
G AA +++ P +G LL+NIYA+ G+WKD E ++ +++ KKSPG SWI
Sbjct: 485 RGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWI 541
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 270/493 (54%), Gaps = 24/493 (4%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPKCKTQF 69
K+ +LKQVH++L+KT + HD + A ++RL ++ YA VFDQ+P+ + F
Sbjct: 26 KSMRELKQVHAFLVKT-GQTHD--NAIATEILRLSATSDFRDIGYALSVFDQLPE-RNCF 81
Query: 70 LWTSLIRN--HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VIC 125
W ++IR H ++ + V + FTF SVL ACA + L E V
Sbjct: 82 AWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHG 141
Query: 126 GYTKIGLMDDA------QRLF---DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
K GL+DD R++ SM + NV+ + V G + N+ +R E
Sbjct: 142 LLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRN-VEGVDDVRNLVRD----ERGRE 196
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY-KV 235
N V M+ GY + G ++ A+++FD +++ W M Y QNG+ K AIE++ ++
Sbjct: 197 FNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRM 256
Query: 236 MRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
M+ +V + V +V + A ++LG +E+ + + ++ + + +AL+ M++KCG
Sbjct: 257 MQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGS 316
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
++ A + F R+ +VI+++++I A HGK+ + + +M GI P+ VT+I +L+A
Sbjct: 317 IEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSA 376
Query: 356 CSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
CSH GLV++G F M G+KP EH CMVDLLGR+G LE+A LI++ D
Sbjct: 377 CSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDV 436
Query: 416 TWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMIS 475
W ALLGA K+H N ++G AA L+++ P +G L+N+YAS G W V++M+
Sbjct: 437 IWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMK 496
Query: 476 ETEKKKSPGCSWI 488
+ + +K PGCSWI
Sbjct: 497 DMDIRKDPGCSWI 509
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 250/486 (51%), Gaps = 49/486 (10%)
Query: 52 LSYARQVFDQIPKCK-TQFLWTSLIRNHVLHAHFRQSILLYAKMH--------------- 95
L +R++F P + T FL +L+R + L+A ++ L++ M
Sbjct: 106 LPASRRIFASFPNPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQRDSFTYSFLIKALS 165
Query: 96 ---------------RLGVLTSGFTFSSVLNACARVPSLLEA-----------------V 123
+LG + + +++++A ++ L+A
Sbjct: 166 SSGLTPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSA 225
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
+ + G + A+R+FD M +++ +SW+ ++ GY G M+ A E + M E+N V+W
Sbjct: 226 MAAMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWS 285
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+++GY K G++ A+ +FD++ + W M QNG + A ++ M++ V +
Sbjct: 286 TVVSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVEL 345
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
A+V ++AC + G + + + ++V R+ +V NA+I M KCG ++ A F
Sbjct: 346 DVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVF 405
Query: 304 -SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
+ I KD +S++++I FA HG +ALD F +M+ +G P+ VT I VL+AC+H G V
Sbjct: 406 DTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFV 465
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G + F M R +GI P EH CM+DLLGR G +E+A LI + WG+LL
Sbjct: 466 EEGRQHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLS 525
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H N E EIA L +L P GN A+L+NIYA G+W D +M + T +KS
Sbjct: 526 ACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKS 585
Query: 483 PGCSWI 488
G SWI
Sbjct: 586 AGSSWI 591
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 254/502 (50%), Gaps = 70/502 (13%)
Query: 55 ARQVFDQI--PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN- 111
AR+VFD+ P T W ++ R + ++L+A+MHR G + FTF V+
Sbjct: 73 ARRVFDKTAQPNGAT---WNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKS 129
Query: 112 -ACARVPSLLEAVICGYTKIGL-------------------------------------- 132
A A E V C K G
Sbjct: 130 CATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVF 189
Query: 133 --------------MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
M A+RLFD +R+V+ W+ +V+GY G+M AA+E +DRM +++
Sbjct: 190 AWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRD 249
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-- 236
++W +++GY GEV K+F+E+ + W + YV+NG K A+E +K M
Sbjct: 250 VMSWNTVLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLV 309
Query: 237 ---------RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
V ++ +V ++AC++LGD+EM + + + +V NALI
Sbjct: 310 LVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALI 369
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M++KCG ++ A F + KD+I+++++I A HG +AL +F +M+ G P+ V
Sbjct: 370 DMYAKCGVIEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGV 429
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+G+L+AC+H GLV +G F+ M + I P EH CMVDLLGR+G ++KA ++
Sbjct: 430 TFVGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRK 489
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
DA W ALLGAC+++ N E+ E+A + L+EL P GN +++NIY +G+ +D
Sbjct: 490 MPMEPDAVIWAALLGACRMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDV 549
Query: 468 EIVKMMISETEKKKSPGCSWIS 489
+K+ + +T +K PGCS I
Sbjct: 550 ARLKVAMRDTGFRKVPGCSVIG 571
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 156/382 (40%), Gaps = 76/382 (19%)
Query: 98 GVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
G+ + + S + ACAR +G + A+R+FD A+ N +W+AM G
Sbjct: 49 GLEGNDYVTPSFITACAR--------------LGGIRRARRVFDKTAQPNGATWNAMFRG 94
Query: 158 YA--------------------------------NCGNMKAAKE-------FYDRMTEKN 178
YA +C AAKE R + N
Sbjct: 95 YAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSN 154
Query: 179 SVTWVAMIAGYGKCGE--VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
+ A+I Y G V +A KVF E+ + + W A+ +V +A ++ +
Sbjct: 155 TFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDLA 214
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
Q +V + V + G I +LGD+ + A+ + + DR N ++ ++ G +
Sbjct: 215 PQRDVVLWNVVVSGYI----ELGDM----VAARELFDRMPDRDVMSWNTVLSGYATNGEV 266
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM----RNEGIE-------PN 345
+ + F + ++V S++ +I + +G +EAL+ F +M EG E PN
Sbjct: 267 ESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPN 326
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
T + VLTACS G +E G K + G K ++D+ + G +EKA +
Sbjct: 327 DYTVVAVLTACSRLGDLEMG-KWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALD-V 384
Query: 406 MDYKDFCDAGTWGALLGACKVH 427
D D D TW ++ +H
Sbjct: 385 FDGLDVKDIITWNTIINGLAMH 406
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
++++ C +L ++ A + H EG +YV+ + I ++ G + A R F +
Sbjct: 26 ISLLRTCGTCVRLHQIQ--AQIVTHGLEG----NDYVTPSFITACARLGGIRRARRVFDK 79
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ ++++M +A + + +F +M G PN TF V+ +C+ ++G
Sbjct: 80 TAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEG 139
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ--LEKAHSLIMDYKDFCDAGTWGALLGA 423
++ + G K T ++ + G + A+ + + +D + W A++ A
Sbjct: 140 -EEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRD-KNVFAWTAIVAA 197
Query: 424 CKVHVNAELGEIAARHLLELGPEK 447
HV A ++AR L +L P++
Sbjct: 198 ---HV-ACRDMVSARRLFDLAPQR 217
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 240/441 (54%), Gaps = 18/441 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD + + K W LI + + +++ + +M LG T +SV++ACA
Sbjct: 210 ARRVFDGMEE-KNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACA 268
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERN-VISWSAMVAGYANCGNMKAAKEFYDR 173
+ + E V R+ S RN +I +A+V YA CG + A+ +DR
Sbjct: 269 TLAAFKEGV----------QIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDR 318
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M +N+V+ M++GY K V+ A+ +F I + D W A+ Y QNG + A+ ++
Sbjct: 319 MPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLF 378
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD------EGCCDRTNYVSNALI 287
+++++E+V + ++A L D+E+ HV + + +V N+LI
Sbjct: 379 RMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLI 438
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+ KCG ++ R F + KD +S+++MI +A +G EAL++F KM G +P+ V
Sbjct: 439 DMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHV 498
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
T IG L ACSH GLVE+G + F MT+ G+ P+ +H TCMVDLLGR+G LE+A LI
Sbjct: 499 TMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIES 558
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
DA W +LL ACKVH N LG+ A + E+ P +G LLAN+Y+ +G+W D+
Sbjct: 559 MPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDA 618
Query: 468 EIVKMMISETEKKKSPGCSWI 488
V+ ++ K PGCSWI
Sbjct: 619 VSVRKLMRRRGVVKQPGCSWI 639
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 140/267 (52%), Gaps = 6/267 (2%)
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
RL + V + ++ Y CG + A++ +DRM+E+N ++ ++I+ + G V E
Sbjct: 49 RLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDE 108
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
+ +F + E D W +M + Q+ + A++ + M +++ +++ + +SAC++
Sbjct: 109 SAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSR 168
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
L D+++ A + + + ++ + LI +SKCG + A R F ++ K+V+S++ +
Sbjct: 169 LKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCL 228
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
IT + +G + EAL+ F +M G +P++VT V++AC+ ++G ++ RV
Sbjct: 229 ITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGV---QIHARVVK 285
Query: 378 IKPLTEHL---TCMVDLLGRSGQLEKA 401
L +VD+ + G++ +A
Sbjct: 286 SDKFRNDLILGNALVDMYAKCGRVNEA 312
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 254/477 (53%), Gaps = 16/477 (3%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
+LKQ+H+ +LKT D Y + D L YA+ VFD + T FLW +
Sbjct: 58 ELKQIHARMLKT-GLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDT-FLWNLM 115
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICGYTKIGL 132
IR +S+LLY +M + +TF S+L AC+ + +L E + TK+G
Sbjct: 116 IRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGY 175
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
E +V + ++++ YA GN K A +DR+ + ++V+W ++I GY K
Sbjct: 176 ------------ENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKA 223
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G++ A +F ++ E +A W M YVQ G K A++++ M+ +V V++ A+
Sbjct: 224 GKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANAL 283
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
SAC QLG +E + ++ + + + LI M++KCG + A F I+ K V
Sbjct: 284 SACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQ 343
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+++++I+ +A HG +EA+ F++M+ GI+PN +TF VLTACS+ GLVE+G F M
Sbjct: 344 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNM 403
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
R + +KP EH C+VDLL R+G L++A I + +A WGALL AC++H N EL
Sbjct: 404 ERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 463
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
GE L+ + P G ANI+A KW + + ++ E K PGCS IS
Sbjct: 464 GEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTIS 520
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 263/488 (53%), Gaps = 24/488 (4%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R T LKQ+H++ + T ++ L+R L L YAR++FD P
Sbjct: 237 RCATLAHLKQLHAHAVVTGRAAAQTTTFH---LLRFASLRLSCLPYARRLFDATPS-PNV 292
Query: 69 FLWTSLIRNHVL-----HAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNA-CARVPSLLE 121
FL+++++ + H R S+ L+ +M R G + F + VL A CA L+
Sbjct: 293 FLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAACAIGVQLVR 352
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++ C K D + I ++++ GY+ G M A++ +D +T++N V+
Sbjct: 353 SIHCHACK-----------DGFYGHDFIR-TSLLDGYSRYGMMGDARKLFDGLTDRNVVS 400
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W A+++GY + G+V +A +F+ + + D W A+ QNG A+ +++ M E
Sbjct: 401 WTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGF 460
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
R + + +SAC LG +++ ++ + C + V N LI M+ KCG L A
Sbjct: 461 RPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKW 520
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F ++ + +++S+I A HG S+ A+ +F MRNEG++P++VTF+G+L AC+HGG
Sbjct: 521 IFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGF 580
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + FELM GI+P EH C+VDLL R+G+ + A + I D K D WG+LL
Sbjct: 581 VDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLL 640
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SEIVKMMISETEKK 480
AC++H + EL E A R+LL+L P +LAN+Y+ G W++ ++ K+M + K
Sbjct: 641 NACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGK 700
Query: 481 KSPGCSWI 488
K PGCSWI
Sbjct: 701 KLPGCSWI 708
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 273/587 (46%), Gaps = 106/587 (18%)
Query: 2 TSKYLVPRSK-------TFNQLKQVHSYLLKTL--TKPHDQYHYYAQFLIRLLQLPGDNL 52
TS + P+S + + K++H++L++T T P + +IR L NL
Sbjct: 12 TSSSMAPKSGRVSKNSISTDTSKELHAHLIRTQLHTDP-----FLMSDVIRSYSLSSTNL 66
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA 112
A VF+QI +C T +W +IR H ++I +Y +MH G+ + T + A
Sbjct: 67 HKAHLVFNQI-ECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKA 125
Query: 113 CARVPSLLEA-------------------------------------------------- 122
CARV ++
Sbjct: 126 CARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSW 185
Query: 123 --VICGYTKIGLMDDAQRLFDSMAERNVIS-----------------W------------ 151
+ICGY++ + RLFD+M N+ + W
Sbjct: 186 NTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKE 245
Query: 152 ----------SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKV 201
+ ++ Y + A+ +DRM E+N V+W A++ G+ K G + A+K+
Sbjct: 246 NNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKL 305
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
FD + + D W +M Y Q A+++++ M V+ +V + +SAC LG +
Sbjct: 306 FDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKL 365
Query: 262 EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
++ + ++ YV N+LI M+ KCG ++ A F R+K+KD +S++S+I+
Sbjct: 366 DVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGL 425
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
A +G + ALD+F +M EG++P TF+G+L AC+H GLV G + FE M V G+ P
Sbjct: 426 AVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPA 485
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
+H C+VDLL RSG ++KA+ I D W LL ACK+H N L EIA + LL
Sbjct: 486 MKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLL 545
Query: 442 ELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL P +GN LL+N YA + +W D+ ++ ++ +++ +K G S I
Sbjct: 546 ELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSI 592
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 263/480 (54%), Gaps = 27/480 (5%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
+VHS+++K + + LI L + G NL+ AR +FD+ + + ++I+
Sbjct: 132 EVHSHIIK---HGFESDLFVRNALIHLYSVFG-NLNLARTLFDE-SLVRDLVSYNTMIKG 186
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQ 137
+ ++ L+ +M G+L FTF ++ + C+ + +G AQ
Sbjct: 187 YAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCS---------VLNEPNVGKQIHAQ 237
Query: 138 -----RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM-TEKNSVTWVAMIAGYGK 191
R DS N++ SA+V YA CG + A+ + M T K++ W +M+ GY +
Sbjct: 238 VYKNLRSIDS----NILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYAR 293
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CGE+ A+K+F+ + E D W AM Y Q G A+E++K M ++ EV +V
Sbjct: 294 CGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAV 353
Query: 252 ISACTQLGDVEMAAIL-AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI-KN- 308
+SAC +LG ++ L ++++ G ++ ++ A++ M++KCG +D A F R+ KN
Sbjct: 354 LSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNM 413
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
K ++SMI A HG + A+ +F ++ + G++P++VTF+GVL AC H GL+E+G K
Sbjct: 414 KTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKL 473
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
FE M +GIKP EH CMVDLLGR G LE+A+ L+ ++ W ALL AC+ H
Sbjct: 474 FESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 533
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N ++GEIA + LLE+ + LL+NI A +W+++ V+ ++ + +K PG S+I
Sbjct: 534 NVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYI 593
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV-RISEVAMVGAISACT 256
++ +F +I P+ W M Y ++ + AI +Y M + + + +++C
Sbjct: 63 SRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCA 122
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
+L +E + H+ + + +V NALIH++S G L+LA F +D++SY++
Sbjct: 123 RLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNT 182
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
MI +A+ + + AL +F +M+N GI P++ TF+ + + CS
Sbjct: 183 MIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCS 223
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/495 (31%), Positives = 258/495 (52%), Gaps = 64/495 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +VFD + K + WT++I H ++ L + KM G+ + TF S+L AC+
Sbjct: 366 ALEVFDLV-KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424
Query: 115 RVPSLLE----------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
PS L+ A++ Y K G + DA R+F+ ++++NV++W+
Sbjct: 425 S-PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWN 483
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEK----NSVT------------------WV------- 183
AM+ Y A + + ++ NS T WV
Sbjct: 484 AMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA 543
Query: 184 ----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A+++ + CG++ AK +F+++ + D W + +VQ+G + A + +
Sbjct: 544 GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF 603
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
K+M++ ++ ++ G ++AC + L + E D V LI M++KC
Sbjct: 604 KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKC 663
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G ++ A + F ++ K+V S++SMIT +A HG+ +EAL++F +M+ EG++P+ +TF+G L
Sbjct: 664 GSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGAL 723
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
+AC+H GL+E+G F+ M + F I+P EH CMVDL GR+G L +A I+ + D
Sbjct: 724 SACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPD 782
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
+ WGALLGAC+VH+N EL E AA+ LEL P G +L+NIYA+ G WK+ ++ +
Sbjct: 783 SRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKV 842
Query: 474 ISETEKKKSPGCSWI 488
+ + K PG SWI
Sbjct: 843 MLDRGVVKKPGQSWI 857
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 225/485 (46%), Gaps = 47/485 (9%)
Query: 7 VPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVFDQIPK 64
+ ++ FN+ QV L+ + H Q Y Q LLQL NL ++++ I K
Sbjct: 85 LSKAGQFNEAMQV----LERVDSSHIQI--YRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 65 CKTQ---FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
Q F+W +LI +YAK +++ F + +LL
Sbjct: 139 SGVQPDIFMWNTLIN-------------MYAKCG--NTISAKQIFDDMREKDVYSWNLL- 182
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVI----SWSAMVAGYANCGNMKAAKEFYDRMT-- 175
+ GY + GL ++A +L + M + +V ++ +M+ A+ N+ +E Y+ +
Sbjct: 183 --LGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKA 240
Query: 176 --EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ + A+I + KCG++ +A KVFD + D W +M ++G K A ++
Sbjct: 241 GWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLF 300
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M +E V+ +VA V + AC +E + + E D YV A++ M++KC
Sbjct: 301 QRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKC 360
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G ++ A F +K ++V+S+++MI FA HG+ EA F KM GIEPN+VTF+ +L
Sbjct: 361 GSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420
Query: 354 TACSHGGLVEDGCK-QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
ACS ++ G + Q ++ +G T ++ + + G L+ AH + +
Sbjct: 421 GACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHR-VFEKISKQ 477
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELG--PEKTGNSALLANIYAS----MGKWKD 466
+ W A++ A H + + LL+ G P + +++L +S +GKW
Sbjct: 478 NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVH 537
Query: 467 SEIVK 471
I+K
Sbjct: 538 FLIMK 542
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 191/401 (47%), Gaps = 50/401 (12%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVI----SWSAMVAGYANCGNMKAAKEFYDRM--- 174
AV+ +K G ++A ++ + + ++ ++SA++ N+ + Y+ +
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 175 -TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ + W +I Y KCG AK++FD++ E D W + YVQ+G + A +++
Sbjct: 140 GVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M Q++V+ + V ++AC +V+ L + + D +V ALI+MH KC
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A + F + +D+++++SMIT A HG+ ++A ++F +M EG++P++V F+ +L
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLL 319
Query: 354 TACSHGGLVEDGCKQFELMTRV-------FGIKPLTEHLTC------------------- 387
AC+H +E G K M V G L+ + C
Sbjct: 320 RACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVV 379
Query: 388 ----MVDLLGRSGQLEKAHSLIMDYKDFCDAG------TWGALLGACKVHVNAELGEIAA 437
M+ + G++++A + + ++G T+ ++LGAC + G+
Sbjct: 380 SWTAMIAGFAQHGRIDEA---FLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQ 436
Query: 438 RHLLE--LGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
H++E G + +ALL+ +YA G KD+ V IS+
Sbjct: 437 DHIIEAGYGSDDRVRTALLS-MYAKCGSLKDAHRVFEKISK 476
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 34/245 (13%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
GD +S A+ +F+ +PK + W ++I V H + + + M G+ TF+
Sbjct: 563 GDLMS-AKNLFNDMPK-RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTG 620
Query: 109 VLNACARVPSLLEA---------------------VICGYTKIGLMDDAQRLFDSMAERN 147
+LNACA +L E +I YTK G ++DA ++F + ++N
Sbjct: 621 LLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680
Query: 148 VISWSAMVAGYANCGNMKAAKE-FYDRMTEKNSVTWVAMIAGYGKC---GEVREAKKVFD 203
V SW++M+ GYA G K A E FY E W+ + C G + E F
Sbjct: 681 VYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQ 740
Query: 204 EIS----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+ EP + M + + G A+E M+ E A++G AC
Sbjct: 741 SMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG---ACQVHL 797
Query: 260 DVEMA 264
+VE+A
Sbjct: 798 NVELA 802
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 276/533 (51%), Gaps = 68/533 (12%)
Query: 17 KQVHSYLLKTLTKPH-DQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
KQ+H+Y+L+ T+ + F + + + R++FDQ+ K WT++I
Sbjct: 250 KQIHAYVLRRGTEMDVSVVNVLIDFYTKC-----NRVKAGRKLFDQMV-VKNIISWTTMI 303
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL--------------LE 121
++ ++ +++ L+ +M+RLG GF +SVL +C +L LE
Sbjct: 304 SGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLE 363
Query: 122 A-------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD-- 172
+ +I Y K L+ DA+++FD MAE+NVIS++AM+ GY++ + A E +
Sbjct: 364 SDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM 423
Query: 173 --RMTEKNSVTWV-----------------------------------AMIAGYGKCGEV 195
R+ + +T+V A+I Y KC V
Sbjct: 424 RVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYV 483
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
++A+ VF+E++E D W AM Y Q+ + A+++Y ++ + +E I+A
Sbjct: 484 KDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAA 543
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
+ L + + + D +V+NAL+ M++KCG ++ A + F+ +DV+ ++
Sbjct: 544 SNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWN 603
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
SMI+ A HG+++EAL MF +M EGI+PN VTF+ VL+ACSH G VEDG F M
Sbjct: 604 SMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG- 662
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
FGIKP TEH C+V LLGRSG+L +A I A W +LL AC++ N ELG+
Sbjct: 663 FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKY 722
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA + P+ +G+ LL+NI+AS G W D + V+ + +E K PG SWI
Sbjct: 723 AAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWI 775
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 197/459 (42%), Gaps = 69/459 (15%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
+ A LI + D + AR VFD++P K W+S++ + + ++++++ +
Sbjct: 63 FLANILINVCS-KSDRVDNARVVFDKMPH-KNLITWSSMVSMYSQQGYSEEALMVFVDLQ 120
Query: 96 RL-GVLTSGFTFSSVLNACARVPSLLE---------------------AVICGYTKIGLM 133
R G + F +SV+ AC ++ + + ++I Y+K G +
Sbjct: 121 RKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNI 180
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV------------- 180
++A+ +FD ++E+ ++W+ ++AGY CG + E + +M E N V
Sbjct: 181 EEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSAC 240
Query: 181 -------------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+V +I Y KC V+ +K+FD++ + W
Sbjct: 241 SMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWT 300
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
M Y+QN + A++++ M + + A +++C +E + + +
Sbjct: 301 TMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKA 360
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
+ +V N LI M++K L A + F + ++VISY++MI ++ K EAL++F
Sbjct: 361 NLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELF 420
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
+MR P+ +TF+ +L S + KQ + FG+ + ++D+ +
Sbjct: 421 HEMRVRLFPPSLLTFVSLL-GVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSK 479
Query: 395 SGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAE 431
++ A + M+ KD W A+ H+ E
Sbjct: 480 CSYVKDARHVFEEMNEKDIV---VWNAMFFGYTQHLENE 515
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 154/361 (42%), Gaps = 68/361 (18%)
Query: 45 LQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGF 104
LQ+P NL R+ F L S+ RN ++H +++ ++ G+ + F
Sbjct: 18 LQIP--NLRPKRREF-------ANLLQLSISRNPIIHYK-----IIHGQIIVSGLQSDTF 63
Query: 105 TFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
+ ++N C +K +D+A+ +FD M +N+I+WS+MV+ Y+ G
Sbjct: 64 LANILINVC--------------SKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYS 109
Query: 165 KAAKEFYDRMTEKNS----------------------------------------VTWVA 184
+ A + + K+ +
Sbjct: 110 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 169
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y K G + EA+ VFD++SE A W + Y + G + ++E++ MR+ NV
Sbjct: 170 LIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPD 229
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ +SAC+ L +E + +V + V N LI ++KC + + F
Sbjct: 230 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 289
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
++ K++IS+++MI+ + + EA+ +F +M G +P+ VLT+C +E
Sbjct: 290 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQ 349
Query: 365 G 365
G
Sbjct: 350 G 350
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 248/466 (53%), Gaps = 40/466 (8%)
Query: 41 LIRLLQL-PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV 99
+I L L P +L YA+ +F+ F+ ++IR + ++I LY MHR +
Sbjct: 44 IISFLSLSPLGSLVYAQAIFED-TTMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDI 102
Query: 100 LTSGFTFSSVLNACARVP----------------------------------SLLEAVIC 125
+ F + L ACARV + +++
Sbjct: 103 KSDHFMYPFGLKACARVLWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVY 162
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
Y++ G +D A+R+FD M E+ + SW+ M++ Y + +A M KN V+W +
Sbjct: 163 LYSQCGFLDLARRVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNML 222
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ-NGYAKAAIEMYKVMRQENVRIS 244
IA Y + G++ +AK VF E+ E DA W +M YVQ YA+A + +++ M NV +
Sbjct: 223 IARYIRLGKIEDAKAVFQEMPERDAVSWNSMIAGYVQIKDYARA-LALFREMEIANVEAT 281
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
++ ++ + AC + G +E+ + + + Y+SNAL+ M++KCG+L+LAW FS
Sbjct: 282 DITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDMYAKCGHLNLAWEVFS 341
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMF--LKMRNEGIEPNQVTFIGVLTACSHGGLV 362
+K K + +++MI + A HG +EAL +F ++M +G PN+VTFIGVL ACSH GLV
Sbjct: 342 ELKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLV 401
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
++G K F M + I P +H CMVDLL R G L++AH +I ++ W LLG
Sbjct: 402 DEGRKFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLG 461
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
AC+VH + +L E + + L ++ P + G+ LL+NIYA +W D E
Sbjct: 462 ACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVE 507
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/577 (29%), Positives = 281/577 (48%), Gaps = 97/577 (16%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPK 64
L+ KT L+ +H+ ++KT H+ + ++ L + P D L YA VFD I +
Sbjct: 8 LLHXCKTLQSLRIIHAQMIKT--GLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--- 121
+W ++ R H L + ++ LY M LG+L + +TF +L +CA+ + E
Sbjct: 66 -PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQ 124
Query: 122 -------------------------------------------------AVICGYTKIGL 132
A+I GY G
Sbjct: 125 LHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGX 184
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN-------------- 178
++ A ++FD + ++V+SW+A ++GYA GN K A E + +M + N
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSA 244
Query: 179 -----SV-------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCW 213
S+ +W+ A+I Y KCGE+ A +F +S D W
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+ Y K A+ +++ M + + ++V M+ +SAC LG +++ + ++D+
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364
Query: 274 GCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
TN S +LI M++KCG ++ A + F + N+ + S+++MI FA HG++ A
Sbjct: 365 RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAF 424
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
D+F +MR GIEP+ +TF+G+L+ACSH G+++ G F MTR + + P EH CM+DL
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDL 484
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
G SG ++A +I + D W +LL ACK+H N ELGE A++L+++ PE G+
Sbjct: 485 XGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSY 544
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYA+ +W + + ++++ KK PGCS I
Sbjct: 545 VLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSI 581
>gi|225456926|ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like [Vitis vinifera]
Length = 560
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/549 (30%), Positives = 272/549 (49%), Gaps = 68/549 (12%)
Query: 3 SKYLVPRSK---TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVF 59
SK L SK T + K++H+++++ +YA ++R + D L AR +F
Sbjct: 12 SKLLFELSKIHQTLPRTKKLHAFIIRNHLSDDP---FYATRILRFYAINSD-LCSARNLF 67
Query: 60 DQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV--P 117
D ++ +LW S+IR + F ++LL+AKM R + FTF+ VL ACA P
Sbjct: 68 DGT-SYRSVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDP 126
Query: 118 SLL-------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
L A++ Y+K+ ++D+A R+F MAE +++ W+AM AGY
Sbjct: 127 DGLRVVHGGVVVSGLGFDSVCGSALVTAYSKLCMVDEASRVFYGMAEPDLVLWNAMAAGY 186
Query: 159 ANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG-------------------------- 188
CG + + M + +S T V +I+G
Sbjct: 187 GYCGFWDKGLQLFSAMRSMGEQPDSYTMVGLISGLADPSLLGIGKGIHGFCLKSSFDCND 246
Query: 189 ---------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
Y +C + A VF +S+PD W+A+ ++G + A+ ++ M E
Sbjct: 247 HVGSALVSMYSRCHCLNSAYGVFTILSQPDLVTWSALITGLSKSGDYEKALLFFRKMNME 306
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
R+ + + ++A Q + + + +V + +S+ALI M+SKCG+++L
Sbjct: 307 GKRVDPILIASVLAASGQSAILGPGSEIHGYVLRHGLESEVMISSALIDMYSKCGFVNLG 366
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
R F + N++ +SY+SMI HG + +A MF ++ +G +P++ TF +L C H
Sbjct: 367 VRVFDSMPNRNTVSYNSMILGLGIHGLAPQAFKMFEEVLEKGFKPDESTFSALLCTCCHA 426
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV++G + F MT F I+ T+H MV LLG +G+L++A+ LI+ + D+G WGA
Sbjct: 427 GLVKNGREIFSRMTEEFHIQARTDHYVHMVKLLGMAGELQEAYDLILSLQQPVDSGIWGA 486
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL C H N EL EI A+ L E PEK+ +L+NIYA +W D + ++ I E
Sbjct: 487 LLSCCNFHGNPELAEIVAQQLFENKPEKSAYRVMLSNIYAGDDRWDDVKKLRDDIQEAGI 546
Query: 480 KKSPGCSWI 488
KK PG SWI
Sbjct: 547 KKMPGLSWI 555
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 240/438 (54%), Gaps = 15/438 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD++ K + W +I +V + F +++ LY K+ G + TF S+L AC+
Sbjct: 261 AREVFDKMKK-RDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACS 319
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
V +L + + ++ I +R DS V +A+V YA CG+++ A++ ++ M
Sbjct: 320 SVKALAQGRLV-HSHI-----LERGLDS----EVAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 175 TEKNSVTWVAMIAGYGKCG---EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+++V W +I Y G + R+A+KVFD + D CW AM YVQNG A AA++
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMK 429
Query: 232 MYKVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+++ M ++ V + + AC LG + L + E + V+N LI+M+
Sbjct: 430 IFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMY 489
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
++CG L+ A R F+ K K V+S+++M+ AF+ +G+ EALD+F +M EG++P+ VT+
Sbjct: 490 ARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYT 549
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
+L C+HGG +E G + F M + G+ P +H MVDLLGRSG+L A L+
Sbjct: 550 SILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPF 609
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D W L AC++H ELGE AA + EL P T ++NIYA+ G W+ V
Sbjct: 610 EPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASV 669
Query: 471 KMMISETEKKKSPGCSWI 488
+ + E KK PG S+I
Sbjct: 670 RKKMEERGLKKLPGLSFI 687
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 211/466 (45%), Gaps = 94/466 (20%)
Query: 50 DNLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
D+L AR VF+ + + + W ++I + + H ++++LY +M+ G+ T TF S
Sbjct: 56 DSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVS 115
Query: 109 VLNACARVP------------------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
VL AC+ + SL A++ Y + G + DA+R+F S+ R+ S
Sbjct: 116 VLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETS 175
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMT---EKNSVTWVAMIAG------------------- 188
W+A++ ++ G+ A + M + NS T++ +I+G
Sbjct: 176 WNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235
Query: 189 ----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
YGKCG EA++VFD++ + D W M CYVQNG A+E+
Sbjct: 236 NGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALEL 295
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
Y+ + E + ++ V + AC+ + + ++ H+ E D V+ AL++M++K
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAK 355
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE----------------------- 329
CG L+ A + F+ +KN+D +++S++I A+A +G ++
Sbjct: 356 CGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMI 415
Query: 330 -----------ALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
A+ +F +M G++P+ VTFI VL AC+ G + + K
Sbjct: 416 TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQISESE 474
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
++ ++++ R G LE+A L K+ +W A++ A
Sbjct: 475 LESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVV-SWTAMVAA 519
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 161/354 (45%), Gaps = 48/354 (13%)
Query: 159 ANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--EPDASC 212
++CG++ + ++R+ E++++ A+I+ YGKC + +A+ VF+ + + +
Sbjct: 18 SSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVS 77
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W AM Y QNG++ A+ +Y M + + V V + AC+ L + V
Sbjct: 78 WNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVF 134
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
D ++NAL+ M+++ G + A R F ++ +D S++++I A + G AL
Sbjct: 135 YSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALR 194
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK-QFELMTRVFGIKPLTEHLTCMVDL 391
+F +M+ + ++PN T+I V++ S ++ +G K E++ F + T ++++
Sbjct: 195 IFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVA--TALINM 251
Query: 392 LGRSGQLEKAHSLIMDYK------------------DFCDA----------------GTW 417
G+ G +A + K DF +A T+
Sbjct: 252 YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATF 311
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPE-KTGNSALLANIYASMGKWKDSEIV 470
++LGAC G + H+LE G + + + L N+YA G +++ V
Sbjct: 312 VSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKV 365
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
V + + +C+ GDV L + + +R V NALI M+ KC L A F
Sbjct: 8 VTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFES 67
Query: 306 I--KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ + ++V+S+++MI A+A +G S EAL ++ +M +G+ + VTF+ VL ACS
Sbjct: 68 MDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS------ 121
Query: 364 DGCKQFELMTRVF--GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ E+ RVF G+ +V + R G + A + + D +W A++
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR-DETSWNAVI 180
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 271/536 (50%), Gaps = 61/536 (11%)
Query: 7 VPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
+P+ NQ+KQ+H+ +++ H H + + L NL A +VF+Q+ +
Sbjct: 26 LPKCANLNQVKQLHAQIIRR--NLHQDLHIAPKLISALSLCRQTNL--ALRVFNQVQEPN 81
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA------------ 114
L SLIR H L++ Q+ ++++M R G+ FT+ +L AC+
Sbjct: 82 VH-LCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMH 140
Query: 115 ------------RVPSLL------------------------------EAVICGYTKIGL 132
VP+ L +++ G K G
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
+ DA++LFD M +R++ISW+ M+ GYA C M A E +++M E+N+V+W M+ GY K
Sbjct: 201 LRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 193 GEVREAKKVFDEISEP--DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
G++ A+ +FD++ P + W + Y + G K A ++ M +R A +
Sbjct: 261 GDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAIS 320
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
++AC + G + + + + + V NAL+ M++KCG L A+ F+ + KD
Sbjct: 321 ILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKD 380
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
++S+++M+ HG +EA+++F +MR EGI P++VTFI VL +C+H GL+++G F
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
M +V+ + P EH C+VDLLGR G+L++A ++ + WGALLGAC++H
Sbjct: 441 SMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
++ + +L++L P GN LL+NIYA+ W+ ++ + +K G S
Sbjct: 501 DIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 261/483 (54%), Gaps = 33/483 (6%)
Query: 14 NQLKQVHSYLLKT-LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
N +KQ+H++ L+T + + D L RLL +P NL YAR++FD T FL+
Sbjct: 2 NGIKQLHAHCLRTGVDETKD-------LLQRLLLIP--NLVYARKLFDHHQNSCT-FLYN 51
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA-----RVPSLLEAVICGY 127
LI+ + +H +SI+LY + G+ S TF+ + A A R LL +
Sbjct: 52 KLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHS----- 106
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
+ F S E + + ++ YA G + A+ +D M++++ W AMI
Sbjct: 107 ----------QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMIT 156
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEV 246
GY + G+++ A ++FD + + + W + + QNG A++M+ M ++ +V+ + +
Sbjct: 157 GYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHI 216
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+V + AC LG++E+ L + E YV NA I M+SKCG +D+A R F +
Sbjct: 217 TVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL 276
Query: 307 KN-KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
N +++ S++SMI + A HGK EAL +F +M EG +P+ VTF+G+L AC HGG+V G
Sbjct: 277 GNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKG 336
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F+ M V I P EH CM+DLLGR G+L++A+ LI DA WG LLGAC
Sbjct: 337 QELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACS 396
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
H N E+ EIA+ L +L P GN +++NIYA+ KW ++ ++ + K+ G
Sbjct: 397 FHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGY 456
Query: 486 SWI 488
S+
Sbjct: 457 SYF 459
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 249/494 (50%), Gaps = 62/494 (12%)
Query: 55 ARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
AR VFD + C + W +++ + ++ ++ +M + G++ T+ S+LN
Sbjct: 477 ARLVFDGM--CDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTH 534
Query: 114 ARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+L A I Y + G +DDA+ LFD ++ R+V +W+
Sbjct: 535 GSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWN 594
Query: 153 AMVAGYAN--CGN--------------MKAAKEFYDRMT---EKNSVTWV---------- 183
AM+ G A CG + A F + ++ ++ ++ WV
Sbjct: 595 AMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDA 654
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
A++ Y KCG V+ AK+VFD++ E + + W M Q+G A +
Sbjct: 655 GLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFL 714
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M +E + V +SAC G +E + H V NAL+HM++KCG
Sbjct: 715 QMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCG 774
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+D A F + +DV S++ MI A HG+ EALD F+KM++EG +PN +++ VLT
Sbjct: 775 SIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLT 834
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV++G +QF MT+ +GI+P EH TCMVDLLGR+G LE+A I++ D
Sbjct: 835 ACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDD 894
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
WGALLGAC + N E+ E AA+ L+L P+ LL+NIYA+ GKW+ +V+ M+
Sbjct: 895 APWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMM 954
Query: 475 SETEKKKSPGCSWI 488
+K PG SWI
Sbjct: 955 QRKGIRKEPGRSWI 968
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 190/408 (46%), Gaps = 75/408 (18%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQVH ++K+ +Q Y A L+R+ G L ARQVFD++ K K ++WT++I
Sbjct: 138 KQVHVCIIKS---GMEQNLYVANKLLRVYIRCG-RLQCARQVFDKLLK-KNIYIWTTMIG 192
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC----------------------- 113
+ + H ++ +Y KM + + T+ S+L AC
Sbjct: 193 GYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQS 252
Query: 114 -ARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
RV + A++ Y K G ++DAQ +FD M ERNVISW+ M+ G A+ G + A +
Sbjct: 253 DVRVET---ALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFL 309
Query: 173 RMTEK----NSVTWV-----------------------------------AMIAGYGKCG 193
+M + NS T+V A++ Y K G
Sbjct: 310 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 369
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV--RISEVAMVGA 251
+ +A+ VFD ++E D W M Q+G + A ++ M++ ++ +
Sbjct: 370 SIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILN 429
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
SA +E ++ KH +E + NALIHM++KCG +D A F + ++DV
Sbjct: 430 ASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDV 489
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
IS+++M+ A +G EA +FL+M+ EG+ P+ T++ +L +HG
Sbjct: 490 ISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLN--THG 535
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 190/436 (43%), Gaps = 68/436 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VFD + + + F WT +I H +++ L+ +M R G L + T+ S+LNA A
Sbjct: 374 ARVVFDGMTE-RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASA 432
Query: 115 RVP-SLLE----------------------AVICGYTKIGLMDDAQRLFDSMAERNVISW 151
S LE A+I Y K G +DDA+ +FD M +R+VISW
Sbjct: 433 IASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISW 492
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEK-------------------NSVTWV--------- 183
+AM+ G A G A + +M ++ +++ WV
Sbjct: 493 NAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVE 552
Query: 184 -----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
A I Y +CG + +A+ +FD++S + W AM Q + A+ +
Sbjct: 553 TGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSL 612
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH-VDEGCCDRTNYVSNALIHMHS 291
+ M++E + +SA +E + H D G D V NAL+H +S
Sbjct: 613 FLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLR--VGNALVHTYS 670
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG + A + F + ++V +++ MI A HG +A FL+M EGI P+ T++
Sbjct: 671 KCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVS 730
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+L+AC+ G +E K+ G+ +V + + G ++ A S+ D +
Sbjct: 731 ILSACASTGALE-WVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVER 789
Query: 412 CDAGTWGALLGACKVH 427
D +W ++G H
Sbjct: 790 -DVFSWTVMIGGLAQH 804
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 147/333 (44%), Gaps = 49/333 (14%)
Query: 98 GVLTSGFTFSSVLNACARVPSLLEAV---ICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
G+ F++ ++L C + +L A +C + S E+N+ + +
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVC-------------IIKSGMEQNLYVANKL 159
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+ Y CG ++ A++ +D++ +KN W MI GY + G +A +V+D+
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDK---------- 209
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
MRQE + +E+ + + AC +++ + H+ +
Sbjct: 210 ---------------------MRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQS 248
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
V AL++M+ KCG ++ A F ++ ++VIS++ MI A +G+ QEA +F
Sbjct: 249 GFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLF 308
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
L+M+ EG PN T++ +L A + G +E K+ G+ +V + +
Sbjct: 309 LQMQREGFIPNSYTYVSILNANASAGALE-WVKEVHSHAVNAGLALDLRVGNALVHMYAK 367
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
SG ++ A ++ D D +W ++G H
Sbjct: 368 SGSIDDAR-VVFDGMTERDIFSWTVMIGGLAQH 399
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 34/249 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ YA+QVFD + + + WT +I H + + +M R G++ T+ S+L
Sbjct: 674 NVKYAKQVFDDMVE-RNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSIL 732
Query: 111 NACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA +L A++ Y K G +DDA+ +FD M ER+V
Sbjct: 733 SACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVF 792
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEI 205
SW+ M+ G A G A +F+ +M + N ++VA++ G V E ++ F +
Sbjct: 793 SWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSM 852
Query: 206 S-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
+ EP + M + G + A M E A++G AC G+
Sbjct: 853 TQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLG---ACVTYGN 909
Query: 261 VEMAAILAK 269
+EMA AK
Sbjct: 910 LEMAEFAAK 918
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 106/209 (50%), Gaps = 24/209 (11%)
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
AK A+ M K+ Q+ + I + V + C + D+ +A + + + ++ YV+N
Sbjct: 99 AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANK 158
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ ++ +CG L A + F ++ K++ +++MI +A++G +++A+ ++ KMR E +PN
Sbjct: 159 LLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218
Query: 346 QVTFIGVLTACS-----------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
++T++ +L AC H +++ G F+ RV T +V++ +
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSG---FQSDVRV---------ETALVNMYVK 266
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G +E A LI D + +W ++G
Sbjct: 267 CGSIEDAQ-LIFDKMVERNVISWTVMIGG 294
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 252/443 (56%), Gaps = 19/443 (4%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L++AR +FD++P + WT+L+ + ++ ++ +M V+ G + V
Sbjct: 191 SLAHARNLFDEMPD-RDVVSWTTLVDGYARRGLADEAWRVFCRM----VVAGGLQPNEVT 245
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE----RNVISWSAMVAGYANCGNMKA 166
L AV+ ++GL+ + ++ +A+ R+V +A++ + G +
Sbjct: 246 ---------LVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAAS 296
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A+E +D M K+ +W M+ Y KCG++ A ++FD++ +A W+ M Y Q
Sbjct: 297 AREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQP 356
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNA 285
+ A+ ++K M +E V +V +SAC QLG +++ I +V G T + NA
Sbjct: 357 EEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNA 416
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
I +++KCG D A + F+ + ++V+S++SMI A A HG+S+E L +F +++ I P+
Sbjct: 417 FIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPD 476
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
++TF+G+L+ACSH GLV +G + F+ M ++GI+P +EH CM+DLLG+ G LE+A +
Sbjct: 477 EITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVA 536
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
D WGALL AC+++ N E+GE AA L++L P +G L++ IYAS KW
Sbjct: 537 KGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWD 596
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
+I+++++ E KK+PGCS I
Sbjct: 597 QVKILRVLMRERGVKKNPGCSSI 619
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 64/318 (20%)
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
++V+ +A+V YAN ++ A+ +D M +++ V+W ++ GY + G EA +VF
Sbjct: 174 QSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVF--- 230
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
C +++ ++ +EV +V +SA Q+G +
Sbjct: 231 ------C---------------------RMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGR 263
Query: 266 ILAKHVDEGCCDRTNYVSNALIHM-------------------------------HSKCG 294
++ ++V +G R+ + NALI M ++KCG
Sbjct: 264 MVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCG 323
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
L+ A R F + ++ +S+S MI A++ + +EA+ +F M EG+EP + VL+
Sbjct: 324 DLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLS 383
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHL-TCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC+ G ++ G ++ + G LT +L +D+ + G + A L + + +
Sbjct: 384 ACAQLGCLDLGRWIYDNYV-ISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAER-N 441
Query: 414 AGTWGALLGACKVHVNAE 431
+W +++ A VH +E
Sbjct: 442 VVSWNSMIMAHAVHGQSE 459
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/490 (32%), Positives = 260/490 (53%), Gaps = 22/490 (4%)
Query: 7 VPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
+ +S+ N LKQV S+L+ H+ L+R L NLSYAR +FD+
Sbjct: 31 ISKSRHLNHLKQVQSFLI---VSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPN 87
Query: 67 TQFLWTSLIRNHV--LHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSLLEAV 123
T L+ +++ + L H + + M +R + F + VL + + S
Sbjct: 88 TH-LYAAVLTGYSSSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSAFSTP 146
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-CGNMKAAKEFYDRMTEKNSVTW 182
+ LF S V+ +A++ YA+ ++ A++ +D M+E+N V+W
Sbjct: 147 LVH----------THLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSW 196
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-V 241
AM++GY + G++ A +F+E+ E D W A+ QNG A+ +++ M + +
Sbjct: 197 TAMLSGYARSGDIFNAVALFEEMPERDVPSWNAILAACTQNGLFVEAVSLFRRMINDPCI 256
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
R +EV +V +SAC Q G +++A + +VSN+L+ ++ KCG L+ A
Sbjct: 257 RPNEVTLVCVLSACAQTGTLQLAKGIHAFAYRRNLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMF---LKMRNEGIEPNQVTFIGVLTACSH 358
F K + +++SMI FA HG+S+EA+ +F +K+ + I+P+ +TFIG+L AC+H
Sbjct: 317 VFKMSSKKSLTAWNSMINCFALHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTH 376
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GGLV G F+LM + FGI+P EH C++DLLGR+GQ ++A + K D WG
Sbjct: 377 GGLVSKGRGYFDLMKKRFGIEPRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWG 436
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
+LL ACK + + +L E+A ++L+ L P G A++AN+Y MG W+++ + MI
Sbjct: 437 SLLNACKKYGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQN 496
Query: 479 KKKSPGCSWI 488
K PG S I
Sbjct: 497 AYKPPGWSQI 506
>gi|334186821|ref|NP_194007.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635615|sp|P0C8Q5.1|PP336_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g22760
gi|332659255|gb|AEE84655.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 578
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 242/439 (55%), Gaps = 22/439 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ A++ FD I + K W SL+ ++ ++ ++ K+ ++ SS
Sbjct: 155 IELAKKAFDDIAE-KNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS--- 210
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
Y K G M +A LF +M ++ SW+ ++ GY NC MK A+ ++
Sbjct: 211 ---------------YAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYF 255
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D M +KN V+W+ MI+GY K G+V+ A+++F +S+ D + AM CY QNG K A++
Sbjct: 256 DAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALK 315
Query: 232 MYKVMRQEN--VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++ M + N ++ E+ + +SA +QLG+ + ++ E + +S +LI +
Sbjct: 316 LFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDL 375
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ K G A++ FS + KD +SYS+MI +G + EA +F M + I PN VTF
Sbjct: 376 YMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTF 435
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
G+L+A SH GLV++G K F M + ++P +H MVD+LGR+G+LE+A+ LI
Sbjct: 436 TGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP 494
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+AG WGALL A +H N E GEIA H ++L + TG + LA IY+S+G+W D+
Sbjct: 495 MQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDART 554
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ I E + K+ GCSW+
Sbjct: 555 VRDSIKEKKLCKTLGCSWV 573
>gi|2245038|emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana]
gi|7268435|emb|CAB80955.1| hypothetical protein [Arabidopsis thaliana]
Length = 851
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 236/440 (53%), Gaps = 51/440 (11%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A Q+FD+IP+ T F + ++ +V + +F ++ + +M F ++ N
Sbjct: 112 AHQLFDEIPEPDT-FSYNIMLSCYVRNVNFEKAQSFFDRM--------PFKDAASWNT-- 160
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+I GY + G M+ A+ LF SM E+N +SW+AM++GY CG+++ A F+
Sbjct: 161 --------MITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVA 212
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ V W AMI GY K +V A+ +F +++ + W AM YV+N + ++++
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M +E +R + + A+ CT +LI M+ KC
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCTL--------------------------TSLISMYCKC 306
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L AW+ F +K KDV+++++MI+ +A HG + +AL +F +M + I P+ +TF+ VL
Sbjct: 307 GELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 366
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC+H GLV G FE M R + ++P +H TCMVDLLGR+G+LE+A LI
Sbjct: 367 LACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPH 426
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
A +G LLGAC+VH N EL E AA LL+L + LANIYAS +W+D V+
Sbjct: 427 AAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKR 486
Query: 474 ISET-----EKKKSPGCSWI 488
+ E+ E+ K PG SWI
Sbjct: 487 MKESNVVKVERVKVPGYSWI 506
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 266/488 (54%), Gaps = 16/488 (3%)
Query: 3 SKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQI 62
S +L+ K + LK +H L++ DQ + I G + Y+ +F
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFS-HYSHSIFTHK 99
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL-- 120
+ +L+ ++I+ ++ILLY ++ + ++ VL A R+ ++
Sbjct: 100 TRPDI-YLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVG 158
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+ C GL+ D + +A++ Y++CG + A++ +D + ++
Sbjct: 159 RQIHCQAIGTGLVSDIHVV------------TALIQMYSSCGCVSEARQLFDGVCFRDVA 206
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W AM+AGY K G+V A+ +F+ + E + W A+ Y Q AI M++ M+ E
Sbjct: 207 FWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEE 266
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V E+AM+ A+SAC LG +E+ + ++D+ + ++NALI M++KCG ++ A
Sbjct: 267 VEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKAL 326
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +++K VI+++SMI A HG +EAL+MF M I+PN++TF+ +L+AC H G
Sbjct: 327 EVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVG 386
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LVE G F+ M +GIKP +H CM+DLLGR+G L++A L+ +A WG+L
Sbjct: 387 LVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSL 446
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L A ++H +AELG+ A +HL+++ P +GN LL+NIYA+ KW ++ +V+ ++ +T K
Sbjct: 447 LAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVK 506
Query: 481 KSPGCSWI 488
K PG S I
Sbjct: 507 KMPGGSCI 514
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 153/444 (34%), Positives = 245/444 (55%), Gaps = 20/444 (4%)
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRN-HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
SYA +F I +L+ ++I+ H + SI LY + G+ ++F L
Sbjct: 27 SYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPKASIFLYNNIQLAGLRPDSYSFPFALK 86
Query: 112 ACARVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN--MKAA 167
A R S+ + + GL D L +A V Y++ G+ + A
Sbjct: 87 AVTRFSSIQTGRQLHSQSIRFGLHSDLHVL------------TAFVQMYSSFGSGCICDA 134
Query: 168 KEFYD--RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
++ +D M+ + W AM+ GY K G++ A+ +F+ + + + W A+ Y Q
Sbjct: 135 RKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANR 194
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSN 284
AI +++ M+ ENV E+AM+ A++AC +LG +E+ + ++D TN ++N
Sbjct: 195 PHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNN 254
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
ALI M++K G + A + F + +K +I++++MI A HG EAL+MF +M ++P
Sbjct: 255 ALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKP 314
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
N +TFI +L+ACSH GLV+ G F M +GI+P EH CM+DLLGR+G L++A +L
Sbjct: 315 NDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTL 374
Query: 405 IMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKW 464
+ +A WG+LL AC H + ELGE+A +HLLEL P+ +GN ALL+NIYAS G+W
Sbjct: 375 LAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNYALLSNIYASRGRW 434
Query: 465 KDSEIVKMMISETEKKKSPGCSWI 488
+S +V+ ++ + KK PG S I
Sbjct: 435 NESRVVRKVMWDAGVKKMPGGSLI 458
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 160/500 (32%), Positives = 262/500 (52%), Gaps = 28/500 (5%)
Query: 1 MTSKYLVPRSKTF-------NQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLP--GDN 51
M+S + P +F ++L Q H+++LK+ + A LI +
Sbjct: 1 MSSSFPPPPILSFAEMATSISELHQAHAHILKSGLI---HSTFAASRLIASVSTNSHAQA 57
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ YA +F +IP ++W ++IR + ++ ++ +M VL +TF+ L
Sbjct: 58 IPYAHSIFSRIPN-PNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALK 116
Query: 112 ACARVPSLLEA-VICGYT-KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+C + E I G+ K GL DD LF + ++ YA+CG ++ A+
Sbjct: 117 SCGSFSGVEEGRQIHGHVLKTGLGDD---LFIQ---------NTLIHLYASCGCIEDARH 164
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREA-KKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
DRM E++ V+W A+++ Y + G + A ++VF E + W AM Y G
Sbjct: 165 LLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSE 224
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
+ +++ M+ V+ +V +SAC +G + + ++D+ +V+ AL+
Sbjct: 225 VLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVD 284
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKCG ++ A F+ KD+ +++S+I+ + HG Q AL +F +M EG +PN+VT
Sbjct: 285 MYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVT 344
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+ VL+ACS GL+++G + F LM V GI+P EH CMVDLLGR G LE+A L+
Sbjct: 345 FVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKM 404
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+ W +LLGAC+ H N EL E A+ LLEL P+++ + L+N+YASMG+WKD
Sbjct: 405 PQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVM 464
Query: 469 IVKMMISETEKKKSPGCSWI 488
V+ + +K PGCS I
Sbjct: 465 EVRQKMRAQGVRKDPGCSMI 484
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 259/482 (53%), Gaps = 15/482 (3%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R N+ +Q+H+++ K L D + + LI L G NL YAR VFD++ K
Sbjct: 99 RINALNEGEQMHNHITK-LGLLSDIF--VSNSLIHLYAACG-NLCYARSVFDEMV-VKDV 153
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
W SLI + F+ + L+ M GV T V++AC R+ Y+
Sbjct: 154 VSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGD--------YS 205
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
M + + D E +V + +V + G +++A++ + M +N VT AMIA
Sbjct: 206 MADYM--VRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAA 263
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y K ++ A+K+FD+I + D W++M Y Q + A+E+++ M++ V+ + +
Sbjct: 264 YAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVI 323
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+S+C LG +++ + ++V + N+LI M+ KCG A + F +K
Sbjct: 324 ASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKE 383
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
KD +S++S+I A++G +E+L++F M EG PN VTF+GVL AC++ LVE+G
Sbjct: 384 KDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDH 443
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
FE M R++ ++P +H C+VDLLGR+GQLEKA I + D W LLG+C H
Sbjct: 444 FESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHG 503
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ + EI + L EL P +GN LL+N YAS +W ++ V+ +++T+ +KSPGCS +
Sbjct: 504 DVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAV 563
Query: 489 SS 490
+
Sbjct: 564 EA 565
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 200/439 (45%), Gaps = 82/439 (18%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
+K++H+Y + + HY ++R + +L +A +VFDQI + T FLW LI
Sbjct: 4 IKRLHAYYIVSGLY---NCHYAMSKVLRSYAILQPDLVFAHKVFDQI-EAPTTFLWNILI 59
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICGYTKIGLM 133
R +I Y K G++ TF +L ACAR+ +L E + TK+GL+
Sbjct: 60 RGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLL 119
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
D + ++++ YA CGN+ A+ +D M K+ V+W ++I GY +C
Sbjct: 120 SD------------IFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCN 167
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
++ + ++K+M+ E V+ +V M+ +S
Sbjct: 168 RFKD-------------------------------ILALFKLMQNEGVKADKVTMIKVVS 196
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL----------------- 296
ACT+LGD MA + +++++ C + Y+ N L+ + G L
Sbjct: 197 ACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVT 256
Query: 297 ------------DL--AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
D+ A + F +I KD+IS+SSMI+ ++ +AL++F +M+ +
Sbjct: 257 MNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKV 316
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
+P+ + V+++C+H G ++ G K R IK T ++D+ + G ++A
Sbjct: 317 KPDAIVIASVVSSCAHLGALDLG-KWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEAL 375
Query: 403 SLIMDYKDFCDAGTWGALL 421
+ + K+ D +W +++
Sbjct: 376 QVFKEMKE-KDTLSWNSII 393
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 266/488 (54%), Gaps = 16/488 (3%)
Query: 3 SKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQI 62
S +L+ K + LK +H L++ DQ + I G + Y+ +F
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFS-HYSHSIFTHK 99
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL-- 120
+ +L+ ++I+ ++ILLY ++ + ++ VL A R+ ++
Sbjct: 100 TRPDI-YLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVG 158
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+ C GL+ D + +A++ Y++CG + A++ +D + ++
Sbjct: 159 RQIHCQAIGTGLVSDIHVV------------TALIQMYSSCGCVSEARQLFDGVCFRDVA 206
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W AM+AGY K G+V A+ +F+ + E + W A+ Y Q AI M++ M+ E
Sbjct: 207 FWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEE 266
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V E+AM+ A+SAC LG +E+ + ++D+ + ++NALI M++KCG ++ A
Sbjct: 267 VEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKAL 326
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +++K VI+++SMI A HG +EAL+MF M I+PN++TF+ +L+AC H G
Sbjct: 327 EVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVG 386
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LVE G F+ M +GIKP +H CM+DLLGR+G L++A L+ +A WG+L
Sbjct: 387 LVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSL 446
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L A ++H +AELG+ A +HL+++ P +GN LL+NIYA+ KW ++ +V+ ++ +T K
Sbjct: 447 LAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVK 506
Query: 481 KSPGCSWI 488
K PG S I
Sbjct: 507 KMPGGSCI 514
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 240/449 (53%), Gaps = 57/449 (12%)
Query: 83 HFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDS 142
H Q + ++A++ R G F +L +C +K +D A R+F
Sbjct: 51 HINQVLPIHAQLIRNGHSQDPFMVFELLRSC--------------SKCHAIDYASRIFQY 96
Query: 143 MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK------------------------- 177
NV ++A++ G+ + GN A + Y RM +
Sbjct: 97 THNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREG 156
Query: 178 --------------NSVTWVAMIAGYGKCGEVREAKKVFDEISE----PDASCWAAMTVC 219
N + + ++ YGKCGE+ +A++VF+E+ E D CW AM
Sbjct: 157 REVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDG 216
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
+V+N A+E ++ M+ ENVR +E +V +SAC+QLG +E+ + ++ + +
Sbjct: 217 FVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELN 276
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
+V NALI+M+S+CG +D A F +K++DVI+Y++MI+ + +GKS++A+++F M
Sbjct: 277 LFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVG 336
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
+ P VTF+GVL ACSHGGLV+ G + F M R + ++P EH CMVDLLGR G+LE
Sbjct: 337 RRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLE 396
Query: 400 KAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYA 459
+A+ LI K D G LL ACK+H N ELGE A+ L + G +G LL+++YA
Sbjct: 397 EAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYA 456
Query: 460 SMGKWKDSEIVKMMISETEKKKSPGCSWI 488
S GKWK++ V+ + E +K PGCS I
Sbjct: 457 SSGKWKEAAQVRAKMKEAGMQKEPGCSSI 485
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 69/323 (21%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ RS+ NQ+ +H+ L++ H Q + L+R + YA ++F Q
Sbjct: 45 LLQRSRHINQVLPIHAQLIRN---GHSQDPFMVFELLRSCS-KCHAIDYASRIF-QYTHN 99
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--- 122
+L+T+LI V ++ ++I LY++M +L + +S+L AC +L E
Sbjct: 100 PNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREV 159
Query: 123 ------------------VICGYTKIGLMDDAQRLFDSMAE----RNVISWSAMVAGYAN 160
++ Y K G + DA+R+F+ M E ++ + W+AM+ G+
Sbjct: 160 HSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVR 219
Query: 161 CGNMKAAKEFYDRMTEKNSVT----------------------WV--------------- 183
A E + M +N WV
Sbjct: 220 NEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFV 279
Query: 184 --AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
A+I Y +CG + EA+ VFDE+ + D + M NG ++ AIE+++VM +
Sbjct: 280 GNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRL 339
Query: 242 RISEVAMVGAISACTQLGDVEMA 264
R + V VG ++AC+ G V+
Sbjct: 340 RPTNVTFVGVLNACSHGGLVDFG 362
>gi|297803844|ref|XP_002869806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315642|gb|EFH46065.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 852
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 243/435 (55%), Gaps = 25/435 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ A++VFD I + K W SL+ ++ + ++ ++ K+ V++ SS
Sbjct: 416 IEMAKKVFDDIAE-KNTVSWNSLLHGYLESGNLDEARRVFDKIPEKDVVSWNLIISS--- 471
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
Y K G M +A LF +M ++ +W+ ++ GY NC MK A+ ++
Sbjct: 472 ---------------YAKKGDMSNACSLFLTMPLKSSATWNILIGGYVNCREMKLARTYF 516
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D M +KNSV+W+ MI+GY K G+V+ A+K+F ++S D + AM CY QNG K A++
Sbjct: 517 DTMPQKNSVSWITMISGYTKLGDVQSAEKLFRQMSRKDKLVYDAMIACYAQNGKPKDALK 576
Query: 232 MYKVMRQEN--VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++ M + N ++ E+ + +SA +QLGD + ++ E + +S +LI +
Sbjct: 577 LFSQMLESNSDIQPDEITLSSVVSASSQLGDTSFGTWVESYITEHGIKIDDLLSTSLIDL 636
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ K G A++ F+ + KD +SYS+MI +G + EA +F +M + I PN VTF
Sbjct: 637 YMKGGDFAKAFKLFNDLIKKDTVSYSAMIMGCGINGMATEANCLFREMIEKKIPPNLVTF 696
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
G+L+A SH GLV++G K F M + ++P +H MVD+LGR+G+LE+A+ LI
Sbjct: 697 TGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP 755
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+AG WGALL A +H N E GEIA H ++L + TG + LANIY S+G+W D+
Sbjct: 756 MQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLANIYTSVGRWDDARN 815
Query: 470 VKMMISETEKKKSPG 484
V+ E+KK PG
Sbjct: 816 VR---DSMEEKKLPG 827
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 262/448 (58%), Gaps = 29/448 (6%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSV 109
NL AR FD++P+ ++ W +++ + ++I L+ M G V T+++V
Sbjct: 143 NLKTARMYFDKMPE-RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATV 201
Query: 110 LNACARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAER-NVISWSAMVAGYANCGNMKA 166
+++C+ + P L E+++ ++L D + R N +A++ +A CGN++A
Sbjct: 202 ISSCSSLGDPCLSESIV------------RKLDDKVGFRPNYFVKTALLDMHAKCGNLEA 249
Query: 167 AKEFYDRM---TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
A + ++++ ++SV W AMI+ Y + G++ AK +FD++ + D W +M Y QN
Sbjct: 250 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQN 309
Query: 224 GYAKAAIEMYKVM--RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
G + AI++++ M +++ + EV MV SAC LG++ + + +
Sbjct: 310 GESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISIS 369
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V N+LI+M+S+CG + A F + +D++SY+++I+ FA+HG E++++ KM+ +G
Sbjct: 370 VYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDG 429
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK-PLTEHLTCMVDLLGRSGQLEK 400
IEP+++T+I +LTACSH GL+++G + FE IK P +H CM+D+LGR+G+LE+
Sbjct: 430 IEPDRITYIAILTACSHAGLLDEGQRLFE------SIKFPDVDHYACMIDMLGRAGRLEE 483
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
A LI AG +G+LL A +H ELGE+AA L ++ P +GN ALL+NIYAS
Sbjct: 484 AMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYAS 543
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
G+WK+ + V+ + + KK+ G SW+
Sbjct: 544 AGRWKEGDKVRDTMRKQGVKKTTGLSWL 571
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 44/375 (11%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICG-YT 128
++ SL ++ + H + + Y+ M + S + VL + + I G Y
Sbjct: 14 VFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYA 73
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY----DRMTEKNSVTWVA 184
K G ++ A++LFD M +R V W+ M++GY CGN + A + D+ +N +TW
Sbjct: 74 KYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTT 133
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRI 243
MI G+ K G ++ A+ FD++ E W AM Y Q G + I ++ M NV+
Sbjct: 134 MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 193
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSNALIHMHSKCGYLDLA--- 299
E IS+C+ LGD ++ + + +D+ R NY V AL+ MH+KCG L+ A
Sbjct: 194 DETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKI 253
Query: 300 --------------WRE-----------------FSRIKNKDVISYSSMITAFADHGKSQ 328
W F ++ +D +S++SMI + +G+S
Sbjct: 254 FEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESF 313
Query: 329 EALDMFLKM--RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+A+ +F +M + +P++VT + V +AC H G + G ++ +V I+
Sbjct: 314 KAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL-KVNHIQISISVYN 372
Query: 387 CMVDLLGRSGQLEKA 401
++++ R G ++ A
Sbjct: 373 SLINMYSRCGSMQDA 387
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 262/448 (58%), Gaps = 29/448 (6%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSV 109
NL AR FD++P+ ++ W +++ + ++I L+ M G V T+++V
Sbjct: 200 NLKTARMYFDKMPE-RSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATV 258
Query: 110 LNACARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAER-NVISWSAMVAGYANCGNMKA 166
+++C+ + P L E+++ ++L D + R N +A++ +A CGN++A
Sbjct: 259 ISSCSSLGDPCLSESIV------------RKLDDKVGFRPNYFVKTALLDMHAKCGNLEA 306
Query: 167 AKEFYDRM---TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
A + ++++ ++SV W AMI+ Y + G++ AK +FD++ + D W +M Y QN
Sbjct: 307 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQN 366
Query: 224 GYAKAAIEMYKVM--RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
G + AI++++ M +++ + EV MV SAC LG++ + + +
Sbjct: 367 GESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISIS 426
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V N+LI+M+S+CG + A F + +D++SY+++I+ FA+HG E++++ KM+ +G
Sbjct: 427 VYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDG 486
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK-PLTEHLTCMVDLLGRSGQLEK 400
IEP+++T+I +LTACSH GL+++G + FE IK P +H CM+D+LGR+G+LE+
Sbjct: 487 IEPDRITYIAILTACSHAGLLDEGQRLFE------SIKFPDVDHYACMIDMLGRAGRLEE 540
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
A LI AG +G+LL A +H ELGE+AA L ++ P +GN ALL+NIYAS
Sbjct: 541 AMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYAS 600
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
G+WK+ + V+ + + KK+ G SW+
Sbjct: 601 AGRWKEGDKVRDTMRKQGVKKTTGLSWL 628
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 44/375 (11%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICG-YT 128
++ SL ++ + H + + Y+ M + S + VL + + I G Y
Sbjct: 71 VFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYA 130
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY----DRMTEKNSVTWVA 184
K G ++ A++LFD M +R V W+ M++GY CGN + A + D+ +N +TW
Sbjct: 131 KYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTT 190
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRI 243
MI G+ K G ++ A+ FD++ E W AM Y Q G + I ++ M NV+
Sbjct: 191 MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 250
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSNALIHMHSKCGYLDLA--- 299
E IS+C+ LGD ++ + + +D+ R NY V AL+ MH+KCG L+ A
Sbjct: 251 DETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKI 310
Query: 300 --------------WRE-----------------FSRIKNKDVISYSSMITAFADHGKSQ 328
W F ++ +D +S++SMI + +G+S
Sbjct: 311 FEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESF 370
Query: 329 EALDMFLKM--RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+A+ +F +M + +P++VT + V +AC H G + G ++ +V I+
Sbjct: 371 KAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL-KVNHIQISISVYN 429
Query: 387 CMVDLLGRSGQLEKA 401
++++ R G ++ A
Sbjct: 430 SLINMYSRCGSMQDA 444
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 201 VFDEISEPDASCWAAMTVCYVQNG-YAKAAIEMYKVMRQE-----NVRISEVAMVGAISA 254
+F + PD + M Y Q G +++ + ++K M Q N V M A S
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSE 102
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
+ + HV + DR +YV N ++ +++K G ++ A + F + ++ V +
Sbjct: 103 ---------SMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADW 153
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+ MI+ + G +EA +F M ++ I N +T+ ++T + G ++ F+ M
Sbjct: 154 NVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE 213
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF----CDAGTWGALLGACKVHVNA 430
+ M+ + G E+ L D D TW ++ +C +
Sbjct: 214 RSVVS-----WNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDP 268
Query: 431 ELGEIAARHL 440
L E R L
Sbjct: 269 CLSESIVRKL 278
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 171/516 (33%), Positives = 261/516 (50%), Gaps = 50/516 (9%)
Query: 11 KTFNQLKQVHSYLLK--------TLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFD-- 60
KT NQLKQ+H + K TLTK + A ++L YAR+ F+
Sbjct: 36 KTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIAS---------PESLDYARKAFELF 86
Query: 61 --QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
+ F+ SLIR + R++ILLY +M LGV + +TF VL+ C ++ +
Sbjct: 87 KEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAA 146
Query: 119 LLEAV---------------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
E + I Y + G MD ++F+ M+ERNV+SW++++ G
Sbjct: 147 FCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICG 206
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
YA K A + M K V A++ Y KCG + AK++FDE + + + +
Sbjct: 207 YARGDRPKEAVSLFFEMLNKVMVN--ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTIL 264
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI-----LAKHVD 272
Y + G A+ A+ + M Q+ R V M+ AISA QL D+ + + +++
Sbjct: 265 SNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIE 324
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ ++ AL+ M ++CG A + F+++ +DV ++++ I A G + A
Sbjct: 325 KNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATG 384
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F +M +G++P+ V F+ VLTACSHGG VE G F LM GI P EH CMVDLL
Sbjct: 385 LFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLL 443
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR+G L +A LI + WG+LL AC+VH N E+ AA + EL P++ G
Sbjct: 444 GRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHV 503
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYAS GKW D V++ + E +K PG S +
Sbjct: 504 LLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSV 539
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 275/536 (51%), Gaps = 57/536 (10%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ SKT +Q+ Q+H+ L+ T + A L+ + N++YA VF QI +
Sbjct: 17 LLQXSKTSSQILQIHAQLITTNLISDT---FAASRLLDSVVSKTLNVNYAELVFAQIHQP 73
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---- 121
+ F+ ++++ + + +++ YA+M + G+L +T+ VL AC + LLE
Sbjct: 74 NS-FICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLV 132
Query: 122 ------------------------------------------------AVICGYTKIGLM 133
+++ GY G M
Sbjct: 133 QGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEM 192
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYAN-CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
++AQ +FD M ER+V+SWS M+ GY G + A+ F+D M ++ V+W +MI GY K
Sbjct: 193 ENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKV 252
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
GE+ A+++FB++ + + W+ M Y + +K A+ +++ M + ++ V++VGA+
Sbjct: 253 GEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAV 312
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
SAC+QLG ++ + ++ V AL+ M+ KCG D A F+ + ++V+
Sbjct: 313 SACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVV 372
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++ MI +G +EAL+ F +M E I + + F+GVL ACSH LV +G F M
Sbjct: 373 SWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQM 432
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
V+ ++P EH C+VDLLGR+GQL++ ++I +A WG+LL AC++H N L
Sbjct: 433 KGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTL 492
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EI L EL + +G L++NIYA +G W+ ++ ++ E + KK G S I
Sbjct: 493 AEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVI 548
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 264/532 (49%), Gaps = 67/532 (12%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+HSYL K Y + + L + ++ A +F+ + LW ++
Sbjct: 265 QLHSYLFKAGISSD----YIMEGSLLDLYVKCGDVETALVIFNSSDRTNV-VLWNLMLVA 319
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVPSLLEAV------------ 123
+S L+ +M G+ + FT+ +L C R L E +
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 124 -------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------------------ 158
I Y+K G ++ A+R+ + + E++V+SW++M+AGY
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK 439
Query: 159 --------------ANCGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
+ C + A ++ Y + W A++ Y +CG +RE
Sbjct: 440 CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A F+EI D W + + Q+G + A++++ M Q V+ + V A+SA
Sbjct: 500 AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559
Query: 258 LGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L +++ I A+ + G T V NALI ++ KCG + A EFS + ++ +S+++
Sbjct: 560 LAEIKQGKQIHARVIKTGHSFETE-VGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNT 618
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
+IT+ + HG+ EALD+F +M+ EGI+PN VTFIGVL ACSH GLVE+G F+ M+ +
Sbjct: 619 IITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEY 678
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
GI+P +H C++D+ GR+GQL++A I + DA W LL ACKVH N E+GE A
Sbjct: 679 GIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFA 738
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HLLEL P + + LL+N YA KW + + V+ M+ + +K PG SWI
Sbjct: 739 AKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWI 790
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 194/457 (42%), Gaps = 64/457 (14%)
Query: 25 KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHF 84
K +T+ +Y LI L G L AR+VF+++ + W +++ + +
Sbjct: 67 KAVTRGLGKYRIVGNLLIDLYSKNGLVLP-ARRVFEEL-SARDNVSWVAMLSGYAQNGLG 124
Query: 85 RQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---------------------AV 123
+++ LY +MHR GV+ + + SSVL++C + + AV
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNS 179
I Y + G A+R+F M R+ ++++ +++G+A CG+ + A E ++ M +
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 180 VTWVAMIAG-----------------------------------YGKCGEVREAKKVFDE 204
VT +++A Y KCG+V A +F+
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ W M V + Q + E++ M+ +R ++ + CT ++++
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ + + YVS LI M+SK G+L+ A R +K KDV+S++SMI + H
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQH 424
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
++AL F +M+ GI P+ + ++ C+ + G Q V G
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL-QIHARIYVSGYSGDVSI 483
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+V+L R G++ +A S + + D TW L+
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLV 519
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 10/243 (4%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y K G V A++VF+E+S D W AM Y QNG + A+ +Y+ M + V +
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142
Query: 245 EVAMVGAISACTQLGDVEMAA----ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+ +S+CT+ E+ A I A+ G C +V NA+I ++ +CG LA
Sbjct: 143 PYVLSSVLSSCTK---AELFAQGRLIHAQGYKHGFCSEI-FVGNAVITLYLRCGSFRLAE 198
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
R F + ++D ++++++I+ A G + AL++F +M+ G+ P+ VT +L AC+ G
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
++ G + + + GI ++DL + G +E A +I + D + W +
Sbjct: 259 DLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETA-LVIFNSSDRTNVVLWNLM 316
Query: 421 LGA 423
L A
Sbjct: 317 LVA 319
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 152/340 (44%), Gaps = 41/340 (12%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV--- 183
Y+K GL+ A+R+F+ ++ R+ +SW AM++GYA G + A Y +M V
Sbjct: 87 YSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVL 146
Query: 184 ------------------------------------AMIAGYGKCGEVREAKKVFDEISE 207
A+I Y +CG R A++VF ++
Sbjct: 147 SSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPH 206
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D + + + Q G+ + A+E+++ M+ + V + ++AC LGD++ L
Sbjct: 207 RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQL 266
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
++ + + +L+ ++ KCG ++ A F+ +V+ ++ M+ AF
Sbjct: 267 HSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDL 326
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++ ++F +M+ GI PNQ T+ +L C+ ++ G +Q ++ G +
Sbjct: 327 AKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG-EQIHSLSVKTGFESDMYVSGV 385
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++D+ + G LEKA ++ K+ D +W +++ H
Sbjct: 386 LIDMYSKYGWLEKARRVLEMLKE-KDVVSWTSMIAGYVQH 424
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 39/203 (19%)
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
I AK V G + V N LI ++SK G + A R F + +D +S+ +M++ +A +G
Sbjct: 64 IHAKAVTRGL-GKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG-------------------- 365
+EAL ++ +M G+ P VL++C+ L G
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 366 --------CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL-IMDYKDFC---- 412
C F L RVF P + +T + G + H+L I + F
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 413 DAGTWGALLGACKVHVNAELGEI 435
D T +LL AC A LG++
Sbjct: 243 DCVTISSLLAAC-----ASLGDL 260
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 168/578 (29%), Positives = 279/578 (48%), Gaps = 99/578 (17%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ KT LKQ+HS ++KT H+ + ++ + P +LSYA +F I +
Sbjct: 34 LLSNCKTLQTLKQIHSQIIKT--GLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI-RN 90
Query: 66 KTQFLWTSLIRN---------------HVLHA------HFRQSIL--------------L 90
+W +IR H++ + + SI +
Sbjct: 91 PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-----------------VICGYTKIGLM 133
+A + +LG+ + F +S++N A+ L+ A +I GY G +
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT------------ 181
D+A+ LFD + R+V+SW+AM++GYA G ++ A F++ M + VT
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEM-RRAKVTPNVSTMLSVLSA 269
Query: 182 ------------WV-----------------AMIAGYGKCGEVREAKKVFDEISEPDASC 212
WV +I Y KCG++ EA +F++I + +
Sbjct: 270 CAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVS 329
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W M Y K A+ +++ M Q N+ ++V + + AC LG +++ + +VD
Sbjct: 330 WNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVD 389
Query: 273 EGCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ N V+ +LI M++KCG L +A R F + K + ++++MI+ FA HG + A
Sbjct: 390 KNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTA 449
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
L +F +M +EG P+ +TF+GVLTAC H GL+ G + F M + + + P H CM+D
Sbjct: 450 LGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMID 509
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGN 450
L GR+G ++A +L+ + + D W +LLGAC++H EL E A+HL EL PE
Sbjct: 510 LFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSA 569
Query: 451 SALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYA G+W+D ++ +++ KK PGCS I
Sbjct: 570 YVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSI 607
>gi|326517559|dbj|BAK03698.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 241/438 (55%), Gaps = 17/438 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLI-RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
AR + D+ P + + + L+ RN +L + R L A+ L V++
Sbjct: 102 ARSLLDETPPARGRAPHSLLVSRNSLLASLLRSGDLPAAR-----ALFDQMPVRDVVS-- 154
Query: 114 ARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
+++ G K G +D A LFD M ERN SW+A++ G G++ A+E +++
Sbjct: 155 ------WNSMVAGLAKAGRLDRAIELFDQMPERNAASWNAVICGLIAHGHLTRAREMFEQ 208
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEM 232
M +++++W+ MI+GY K G+V+ A +F+ + ++ D W AM CY QNG A+ AI +
Sbjct: 209 MPVRSNISWITMISGYAKAGDVQAAAGLFERMENKNDLYAWNAMIACYAQNGCAREAIGV 268
Query: 233 YKVMRQENVRI--SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+ M + +V + +E SAC+QLG++ + + + +++ AL+ ++
Sbjct: 269 FNRMLKPHVCVLPNEKTFSSVTSACSQLGNLRFGLWVQSFMVSLGIELDDHLRTALVDLY 328
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+K G +D A+ F + +DV+SYS+MI +GK EA+ +F +M + I PN V+F+
Sbjct: 329 TKSGQIDRAFDLFKGLSKRDVVSYSAMIVGCGMNGKLNEAIGLFNEMSDANILPNAVSFV 388
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
G+L+A +H GLVE+ F M+ + I+P EH T MVDLLGRSG+L++A LIM
Sbjct: 389 GLLSAYNHAGLVEEARACFTSMSSKYKIRPSMEHYTIMVDLLGRSGKLDEAFQLIMQMPM 448
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
A WGALL +C++H N ELGE+ A E P ++G LL NIYAS KW +
Sbjct: 449 QPRASVWGALLLSCRLHNNVELGEVIASKCFEQAPGESGYYILLGNIYASANKWDKVRRL 508
Query: 471 KMMISETEKKKSPGCSWI 488
+ + E K PG SW+
Sbjct: 509 RKTMKERCLSKMPGSSWV 526
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 243/439 (55%), Gaps = 25/439 (5%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
+F++ F W S+I +++ ++ M +L + + TF + +C+ +
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 118 SL-------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
L +A+I G+ E ++ SA+V Y+ CG ++ A+
Sbjct: 91 DLHSGRQAHQQALIFGF-----------------EPDLFVSSALVDMYSKCGELRDARTL 133
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D ++ +N V+W +MI GY + + A +VFD ++E D W ++ Y QNG + ++
Sbjct: 134 FDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESM 193
Query: 231 EMY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
E++ ++++ + + V + + AC G + + V + + +V ++I M
Sbjct: 194 EIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDM 253
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG +++A + F R++ K+V S+S+M+ + HG ++EAL++F +M G++PN +TF
Sbjct: 254 YCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITF 313
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ VL ACSH GL+E+G F+ M+ F ++P EH CMVDLLGR+G L++A LI K
Sbjct: 314 VSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK 373
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D WGALLGAC++H N +LGEI+AR L EL P+ G LL+NIYA G+W+D E
Sbjct: 374 LRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVER 433
Query: 470 VKMMISETEKKKSPGCSWI 488
+++++ + K PG S +
Sbjct: 434 MRILMKNSGLVKPPGFSLV 452
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 247/461 (53%), Gaps = 46/461 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ AR+ F++I + K F+W ++ + F++++ ++ KM GV + T +S ++
Sbjct: 162 MDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVS 220
Query: 112 ACA----------------RVPSLLEAVICG------YTKIGLMDDAQRLFDSMAERNVI 149
AC +V L ++ G Y K ++ A+R F + + +++
Sbjct: 221 ACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLV 280
Query: 150 SWSAMVA--GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
SW+AM+A G+ G+ KAA EF+ RM A VF E+S
Sbjct: 281 SWNAMLAVTGFTQYGDGKAALEFFQRM---------------------HIACSVFSELST 319
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W ++ Q+G + A+++ + M NV ++ V MV A+ AC++L + +
Sbjct: 320 RDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEI 379
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+ + D N++ N+LI M+ +CG + + R F + +D++S++ MI+ + HG
Sbjct: 380 HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFG 439
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+A+++F + R G++PN +TF +L+ACSH GL+E+G K F++M + + P E C
Sbjct: 440 MDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYAC 499
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
MVDLL R+GQ + I +A WG+LLGAC++H N +L E AAR+L EL P+
Sbjct: 500 MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQS 559
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+GN L+ANIY++ G+W+D+ ++ ++ E K PGCSWI
Sbjct: 560 SGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 600
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 172/422 (40%), Gaps = 102/422 (24%)
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
RLG + ++ C + S L V C + G ++DA+R+FD M+ERNV SW+A++
Sbjct: 27 RLGFQVHAQLVVNGVDVCEFLGSRLLEVYC---QTGCVEDARRMFDKMSERNVFSWTAIM 83
Query: 156 AGYANCG-----------------------------------NMKAAKEFYDRMT----E 176
Y G N + K+ YD M E
Sbjct: 84 EMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFE 143
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
NS +++ + KCG + A++ F+EI D W M Y G K A+ +++ M
Sbjct: 144 GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKM 203
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE--GCC------DRTNYVSNALIH 288
E V+ + + + A+SACT L L +H E G C D V N+L+
Sbjct: 204 VLEGVKPNSITIASAVSACTNLS-------LLRHGREIHGYCIKVEELDSDLLVGNSLVD 256
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSM------------------------------- 317
++KC +++A R+F IK D++S+++M
Sbjct: 257 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSE 316
Query: 318 ------------ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
I+A A G+S ALD+ +M +E N VT + L ACS + G
Sbjct: 317 LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 376
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ + + R G+ L ++D+ GR G ++K+ I D D +W ++
Sbjct: 377 KEIHQFIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRR-IFDLMPQRDLVSWNVMISVYG 434
Query: 426 VH 427
+H
Sbjct: 435 MH 436
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 268/537 (49%), Gaps = 67/537 (12%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
N+ KQ+HSYLLK P Y + + L + + A ++F + LW
Sbjct: 260 LNKGKQLHSYLLKAGMSPD----YIIEGSLLDLYVKCGVIVEALEIFKSGDRTNV-VLWN 314
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-------LEAVIC 125
++ + + +S L+ +M GV + FT+ +L C + L ++
Sbjct: 315 LMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKT 374
Query: 126 G--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN----------- 160
G Y+K G +D A+R+ + + ++V+SW++M+AGY
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 161 ---------------------CGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKC 192
C +KA ++ Y + W A++ Y +C
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARC 494
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G +EA +F+ I D W M + Q+G + A+E++ M Q V+ + V +I
Sbjct: 495 GRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSI 554
Query: 253 SACTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
SA L D++ I A + GC T V+NALI ++ KCG ++ A +F + ++
Sbjct: 555 SASANLADIKQGKQIHATVIKTGCTSETE-VANALISLYGKCGSIEDAKMQFFEMSERNH 613
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S++++IT+ + HG EALD+F +M+ EG++PN VTFIGVL ACSH GLVE+G F+
Sbjct: 614 VSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKS 673
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M+ GI P +H C+VD+LGR+GQL++A + + +A W LL AC+VH N E
Sbjct: 674 MSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIE 733
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+GE+AA++LLEL P + + LL+N YA GKW + V+ M+ + +K PG SWI
Sbjct: 734 IGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWI 790
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 184/419 (43%), Gaps = 66/419 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VF+Q+ + W +++ + + +++ LY +MH GV+ + + SSVL+AC
Sbjct: 96 ARRVFEQL-SARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACT 154
Query: 115 RVPSLLE----------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+ +L E A+I Y + G + A+R+F M + ++++
Sbjct: 155 KA-ALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFN 213
Query: 153 AMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG-------------------- 188
+++ +A CGN ++A E ++ M + VT +++A
Sbjct: 214 TLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKA 273
Query: 189 ---------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
Y KCG + EA ++F + W M V Y Q + +++
Sbjct: 274 GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLF 333
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M VR +E + CT G++ + + + + YVS LI M+SK
Sbjct: 334 CQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKY 393
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G+LD A R ++ KDV+S++SMI + H +EAL+ F M+ GI P+ + +
Sbjct: 394 GWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAI 453
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKD 410
+AC+ + G +Q V G +V+L R G+ ++A SL +++KD
Sbjct: 454 SACAGIKAMRQG-QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKD 511
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 194/443 (43%), Gaps = 63/443 (14%)
Query: 45 LQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGF 104
L L +LS A +VF ++P C + + +LI H + ++ ++ +M G
Sbjct: 187 LYLRFGSLSLAERVFSEMPYCD-RVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCV 245
Query: 105 TFSSVLNACARVPS----------LLEA------VICG-----YTKIGLMDDAQRLFDSM 143
T +S+L ACA + LL+A +I G Y K G++ +A +F S
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305
Query: 144 AERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMI-----AG------ 188
NV+ W+ M+ Y ++ + + + +M N T+ ++ AG
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365
Query: 189 ------------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
Y K G + +A+++ + + D W +M YVQ+
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE 425
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN 284
+ K A+E +K M+ + + + AISAC + + + V + N
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWN 485
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
AL++++++CG A+ F I++KD I+++ M++ FA G +EAL++F+KM G++
Sbjct: 486 ALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKY 545
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
N TF+ ++A ++ ++ G KQ G TE ++ L G+ G +E A
Sbjct: 546 NVFTFVSSISASANLADIKQG-KQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQ 604
Query: 405 IMDYKDFCDAGTWGALLGACKVH 427
+ + + +W ++ +C H
Sbjct: 605 FFEMSER-NHVSWNTIITSCSQH 626
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 150/340 (44%), Gaps = 41/340 (12%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM------------ 174
Y K GL+ A+R+F+ ++ R+ +SW AM++GYA G + A Y +M
Sbjct: 87 YAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVL 146
Query: 175 ---------------------------TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
+ +V A+IA Y + G + A++VF E+
Sbjct: 147 SSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPY 206
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D + + + Q G ++A+E+++ MR V + ++AC +GD+ L
Sbjct: 207 CDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQL 266
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
++ + + +L+ ++ KCG + A F +V+ ++ M+ A+
Sbjct: 267 HSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDL 326
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++ D+F +M G+ PN+ T+ +L C++ G + G +Q L++ G +
Sbjct: 327 AKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLG-EQIHLLSIKTGFESDMYVSGV 385
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++D+ + G L+KA I++ + D +W +++ H
Sbjct: 386 LIDMYSKYGWLDKARR-ILEVLEAKDVVSWTSMIAGYVQH 424
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 4/240 (1%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y K G V+ A++VF+++S D W AM Y +NG + A+ +Y M V +
Sbjct: 83 LIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPT 142
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+ +SACT+ E ++ V +G C T V NALI ++ + G L LA R F
Sbjct: 143 PYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSET-VVGNALIALYLRFGSLSLAERVF 201
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
S + D ++++++I+ A G + AL++F +MR G P+ VT +L AC+ G +
Sbjct: 202 SEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLN 261
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G KQ G+ P ++DL + G + +A I D + W +L A
Sbjct: 262 KG-KQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE-IFKSGDRTNVVLWNLMLVA 319
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
N LI +++K G + A R F ++ +D +S+ +M++ +A +G +EA+ ++ +M G+
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 344 PNQVTFIGVLTACSHGGLVEDG 365
P VL+AC+ L E G
Sbjct: 141 PTPYVLSSVLSACTKAALFEQG 162
>gi|345505206|gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
Length = 594
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 248/473 (52%), Gaps = 23/473 (4%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+H +L KT + Q + L L L +ARQVFD++P+ + + S+I
Sbjct: 122 QIHGFLRKTGIWSD----LFLQNCLIGLYLKCGCLGFARQVFDRMPQ-RDSVSYNSMIDG 176
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGL-MDDA 136
+V + G++ S ++ + ++I GY + ++ A
Sbjct: 177 YV----------------KCGLMKSAHKLFDLMPREIKNLISWNSMISGYAQTADGLNTA 220
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
+LF M E+++ISW++M+ G G ++ AK +D M ++ VTW MI GY K G V
Sbjct: 221 SKLFSEMPEKDLISWNSMINGCVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVH 280
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISAC 255
AK +FD++ + D +M YVQN Y A+E++ M ++ ++ E +V +SA
Sbjct: 281 HAKSLFDQMHQRDVVACNSMMAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAI 340
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + A + ++ E + ALI MHSKCG + A F I+NK + ++
Sbjct: 341 AQLGRLSKAMSMHVYIVEKRFPLGGKLGVALIDMHSKCGSIQHAISVFEGIENKSIDHWN 400
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI A HG + A DM +++ I+P+ +TFIGVL ACSH GLV++G FELM R
Sbjct: 401 AMIGGLAIHGLGELAFDMLMQIERCSIQPDXITFIGVLNACSHSGLVKEGLLCFELMRRK 460
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
I+P +H C+VD+L RSG +E A LI D + W + L AC H E GE+
Sbjct: 461 HXIEPRLQHYGCLVDVLSRSGSIELAKHLIEDMPMEPNDVIWRSFLSACSTHEEFETGEL 520
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL+ + LL+N+YAS+G WKD V+MM+ + + K PGCSWI
Sbjct: 521 VAKHLILQAGYNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWI 573
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 272/514 (52%), Gaps = 37/514 (7%)
Query: 9 RSKTFNQLKQVHSYL-LKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKT 67
R ++ Q+KQVH+ + L+ D + + G ++AR VFD+IP
Sbjct: 17 RCRSLRQIKQVHALMVLQGFLS--DSSALRELIFASAVGVRG-GTAHARLVFDRIPH-PD 72
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHR-------LGVLTSGFTFSSVLNACARVPS-- 118
+F++ +LIR R ++ +YA+M R + + TF VL ACA + +
Sbjct: 73 RFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGE 132
Query: 119 -------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
+ A+I + +G + A LFD A + ++WSAM++G+A
Sbjct: 133 TGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFA 192
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
G++ AA+E +D K+ V+W MI Y K G++ A+++FD + D W AM
Sbjct: 193 RRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISG 252
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR- 278
YV+ G K A+E+++ M+ + V M+ +SAC GD++ L + G R
Sbjct: 253 YVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFL-SGRFSRI 311
Query: 279 --TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
T + NALI M++KCG + A F +++K+V +++S+I A HG + E++ +F K
Sbjct: 312 GPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRK 371
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M ++P+++TF+ VL ACSHGG+V+ G + F LM + + I+P +H CMVD+L R G
Sbjct: 372 MLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGG 431
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L++A I K + W LLGAC++H EL E A R LL+ + +G+ LL+N
Sbjct: 432 LLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSN 491
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
IYAS+G+W SE ++ ++ ++ K G + I S
Sbjct: 492 IYASVGEWPGSENMRKLMDDSGVNKEAGRAVIDS 525
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 264/532 (49%), Gaps = 67/532 (12%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+HSYL K Y + + L + ++ A +F+ + LW ++
Sbjct: 265 QLHSYLFKAGISSD----YIMEGSLLDLYVKCGDVETALVIFNSSDRTNV-VLWNLMLVA 319
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVPSLLEAV------------ 123
+S L+ +M G+ + FT+ +L C R L E +
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 124 -------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------------------ 158
I Y+K G ++ A+R+ + + E++V+SW++M+AGY
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK 439
Query: 159 --------------ANCGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
+ C + A ++ Y + W A++ Y +CG +RE
Sbjct: 440 CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A F+EI D W + + Q+G + A++++ M Q V+ + V A+SA
Sbjct: 500 AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559
Query: 258 LGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L +++ I A+ + G T V NALI ++ KCG + A EFS + ++ +S+++
Sbjct: 560 LAEIKQGKQIHARVIKTGHSFETE-VGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNT 618
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
+IT+ + HG+ EALD+F +M+ EGI+PN VTFIGVL ACSH GLVE+G F+ M+ +
Sbjct: 619 IITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEY 678
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
GI+P +H C++D+ GR+GQL++A I + DA W LL ACKVH N E+GE A
Sbjct: 679 GIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFA 738
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HLLEL P + + LL+N YA KW + + V+ M+ + +K PG SWI
Sbjct: 739 AKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWI 790
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 194/457 (42%), Gaps = 64/457 (14%)
Query: 25 KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHF 84
K +T+ +Y LI L G L AR+VF+++ + W +++ + +
Sbjct: 67 KAVTRGLGKYRIVGNLLIDLYSKNGLVLP-ARRVFEEL-SARDNVSWVAMLSGYAQNGLG 124
Query: 85 RQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---------------------AV 123
+++ LY +MHR GV+ + + SSVL++C + + AV
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNS 179
I Y + G A+R+F M R+ ++++ +++G+A CG+ + A E ++ M +
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 180 VTWVAMIAG-----------------------------------YGKCGEVREAKKVFDE 204
VT +++A Y KCG+V A +F+
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ W M V + Q + E++ M+ +R ++ + CT ++++
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ + + YVS LI M+SK G+L+ A R +K KDV+S++SMI + H
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQH 424
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
++AL F +M+ GI P+ + ++ C+ + G Q V G
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL-QIHARIYVSGYSGDVSI 483
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+V+L R G++ +A S + + D TW L+
Sbjct: 484 WNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLV 519
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 10/243 (4%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y K G V A++VF+E+S D W AM Y QNG + A+ +Y+ M + V +
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142
Query: 245 EVAMVGAISACTQLGDVEMAA----ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+ +S+CT+ E+ A I A+ G C +V NA+I ++ +CG LA
Sbjct: 143 PYVLSSVLSSCTK---AELFAQGRLIHAQGYKHGFCSEI-FVGNAVITLYLRCGSFRLAE 198
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
R F + ++D ++++++I+ A G + AL++F +M+ G+ P+ VT +L AC+ G
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
++ G + + + GI ++DL + G +E A +I + D + W +
Sbjct: 259 DLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETA-LVIFNSSDRTNVVLWNLM 316
Query: 421 LGA 423
L A
Sbjct: 317 LVA 319
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 152/340 (44%), Gaps = 41/340 (12%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV--- 183
Y+K GL+ A+R+F+ ++ R+ +SW AM++GYA G + A Y +M V
Sbjct: 87 YSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVL 146
Query: 184 ------------------------------------AMIAGYGKCGEVREAKKVFDEISE 207
A+I Y +CG R A++VF ++
Sbjct: 147 SSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPH 206
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D + + + Q G+ + A+E+++ M+ + V + ++AC LGD++ L
Sbjct: 207 RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQL 266
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
++ + + +L+ ++ KCG ++ A F+ +V+ ++ M+ AF
Sbjct: 267 HSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDL 326
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++ ++F +M+ GI PNQ T+ +L C+ ++ G +Q ++ G +
Sbjct: 327 AKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG-EQIHSLSVKTGFESDMYVSGV 385
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++D+ + G LEKA ++ K+ D +W +++ H
Sbjct: 386 LIDMYSKYGWLEKARRVLEMLKE-KDVVSWTSMIAGYVQH 424
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 39/203 (19%)
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
I AK V G + V N LI ++SK G + A R F + +D +S+ +M++ +A +G
Sbjct: 64 IHAKAVTRGL-GKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG-------------------- 365
+EAL ++ +M G+ P VL++C+ L G
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 366 --------CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL-IMDYKDFC---- 412
C F L RVF P + +T + G + H+L I + F
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 413 DAGTWGALLGACKVHVNAELGEI 435
D T +LL AC A LG++
Sbjct: 243 DCVTISSLLAAC-----ASLGDL 260
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 272/514 (52%), Gaps = 37/514 (7%)
Query: 9 RSKTFNQLKQVHSYL-LKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKT 67
R ++ Q+KQVH+ + L+ D + + G ++AR VFD+IP
Sbjct: 17 RCRSLRQIKQVHALMVLQGFLS--DSSALRELIFASAVGVRG-GTAHARLVFDRIPH-PD 72
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHR-------LGVLTSGFTFSSVLNACARVPS-- 118
+F++ +LIR R ++ +YA+M R + + TF VL ACA + +
Sbjct: 73 RFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGE 132
Query: 119 -------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
+ A+I + +G + A LFD A + ++WSAM++G+A
Sbjct: 133 TGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFA 192
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
G++ AA+E +D K+ V+W MI Y K G++ A+++FD + D W AM
Sbjct: 193 RRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISG 252
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR- 278
YV+ G K A+E+++ M+ + V M+ +SAC GD++ L + G R
Sbjct: 253 YVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFL-SGRFSRI 311
Query: 279 --TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
T + NALI M++KCG + A F +++K+V +++S+I A HG + E++ +F K
Sbjct: 312 GPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRK 371
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M ++P+++TF+ VL ACSHGG+V+ G + F LM + + I+P +H CMVD+L R G
Sbjct: 372 MLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGG 431
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L++A I K + W LLGAC++H EL E A R LL+ + +G+ LL+N
Sbjct: 432 LLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSN 491
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
IYAS+G+W SE ++ ++ ++ K G + I S
Sbjct: 492 IYASVGEWPGSENMRKLMDDSGVNKEAGRAVIDS 525
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 243/440 (55%), Gaps = 20/440 (4%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+NL A +VF+++P+ + W S+I ++ + +I L KM ++T
Sbjct: 124 ENLGSAYRVFEEMPE-RDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVT-------- 174
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+V+CG +K G M+ A +F+ M RN +SW++M++GY G+++AA+
Sbjct: 175 ----------WNSVVCGLSKAGNMELAHSVFEQMPLRNEVSWNSMISGYVRIGDVRAAQS 224
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN-GYAKA 228
+ +M EK V+W AMI+GY G+++ A+ +F+ + + W AM YV N + +A
Sbjct: 225 IFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQA 284
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
+ ++ R + ++ +SAC LG +E + ++ + + + NALI
Sbjct: 285 LCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALID 344
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M +KCG ++ A F + + +I++++M++ A +GK +EA+++F KM EG +P+ V
Sbjct: 345 MFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVI 404
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
FI VL+AC+HGGLVE+G + F+ M + FGIKP EH CMVDLLGR+G+LE+A
Sbjct: 405 FIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTARM 464
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+A W LL CK+H N +L + +++ P L++N+ AS G+W+D
Sbjct: 465 HLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDVL 524
Query: 469 IVKMMISETEKKKSPGCSWI 488
++ + + +K PGCS I
Sbjct: 525 SFRVAMRQQRMEKVPGCSSI 544
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 256/481 (53%), Gaps = 26/481 (5%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFDQIPKCKTQFLWTS 73
+QVH + ++ PH + L+ + + P D AR+VFD +P+ + W S
Sbjct: 171 EQVHGLVARS---PHADDVHIRSALVDMYAKCERPED----ARRVFDAMPE-RNVVSWNS 222
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLM 133
LI + + ++++L+ +M G T SSV++ACA + + E G M
Sbjct: 223 LITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADRE----GRQVHAHM 278
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
RL D M N A+V YA CG A+ +D M ++ V+ +++ GY K
Sbjct: 279 VKCDRLRDDMVLNN-----ALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSA 333
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
V +A+ VF ++ E + W + Y QNG + AI ++ ++++++ + ++
Sbjct: 334 NVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLN 393
Query: 254 ACTQLGDVEMAAILAKHV-DEGC-----CDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
AC + D+++ HV EG + +V N+L+ M+ K G +D + F R+
Sbjct: 394 ACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMA 453
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+D +S+++MI +A +G++++AL +F +M P+ VT IGVL+AC H GLV++G +
Sbjct: 454 ARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRR 513
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F MT GI P +H TCMVDLLGR+G L++A LI D D+ W +LLGAC++H
Sbjct: 514 YFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLH 573
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N ELGE A L EL P+ +G LL+N+YA MGKW + V+ + + K PGCSW
Sbjct: 574 KNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSW 633
Query: 488 I 488
I
Sbjct: 634 I 634
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
R+ S + +V+ YA G ++ A+ +D + +N+ ++ A+++ Y + G E
Sbjct: 42 RILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDE 101
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNG--YAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A+ +F+ I +PD + A+ ++G +A A+ M ++ ++ + A+SAC
Sbjct: 102 ARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSAC 161
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
D + V ++ +AL+ M++KC + A R F + ++V+S++
Sbjct: 162 AAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWN 221
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
S+IT + +G EAL +F++M G P++VT V++AC+ GL D
Sbjct: 222 SLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACA--GLAAD 268
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 109/413 (26%)
Query: 34 YHYYAQFLIRLLQLP---------GDNLSYARQVFDQI---PKCKTQFLWTSLIRNHVLH 81
+H++ Q L+ L+ NLS AR +I P FL +L+ +
Sbjct: 6 HHHHGQELVAHLRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARL 65
Query: 82 AHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFD 141
R + ++ ++ L + F+++++L+A Y ++G D+A+ LF+
Sbjct: 66 GRLRDARRVFDEI----PLRNTFSYNALLSA--------------YARLGRPDEARALFE 107
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAK--EFYDRM--------------------TEKNS 179
++ + + S++A+VA A G AA F M EK+S
Sbjct: 108 AIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDS 167
Query: 180 VTW-------------------VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
T A++ Y KC +A++VFD + E + W ++ CY
Sbjct: 168 RTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCY 227
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL-GDVEMAAILAKHVDEGCCDRT 279
QNG A+ ++ M EV + +SAC L D E + A V CDR
Sbjct: 228 EQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVK---CDRL 284
Query: 280 N---YVSNALIHMHSKCGY-------------------------------LDLAWREFSR 305
++NAL+ M++KCG ++ A FS+
Sbjct: 285 RDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQ 344
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
+ K+VI+++ +I A+A +G+ +EA+ +F++++ + I P T+ VL AC +
Sbjct: 345 MVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGN 397
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 262/541 (48%), Gaps = 67/541 (12%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S+ +QVH +++T +++ + A L+ + GD + A VF+++P
Sbjct: 218 SRDLEAGRQVHGAVVRT---GYEKDVFTANALVDMYSKLGD-IEMAATVFEKMPAADV-V 272
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--------------- 114
W + I V H H +++ L +M G++ + FT SSVL ACA
Sbjct: 273 SWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFM 332
Query: 115 --RVPSLLEAVICG----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
V E V G Y K G +DDA+++FD M R++I W+A+++G ++ G
Sbjct: 333 VKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVL 392
Query: 169 EFYDRMTEK------NSVTWVA-----------------------------------MIA 187
+ RM ++ N T + +I
Sbjct: 393 SLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLID 452
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y KCG++ A KVF E D M Q + + AI+++ M ++ +
Sbjct: 453 SYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFV 512
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ ++ACT L E + H+ + + NAL++ ++KCG ++ A FS +
Sbjct: 513 LSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLP 572
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+ ++S+S+MI A HG + ALD+F +M +EG+ PN +T VL+AC+H GLV+D K
Sbjct: 573 ERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKK 632
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
FE M FGI EH CM+D+LGR+G+LE A L+ + +A WGALLGA +VH
Sbjct: 633 YFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVH 692
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+ ELG +AA L L PEK+G LLAN YAS G W + V+ ++ ++ KK P SW
Sbjct: 693 RDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSW 752
Query: 488 I 488
+
Sbjct: 753 V 753
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 149/339 (43%), Gaps = 44/339 (12%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK--------- 177
Y++ L A+ +FD + + +SWS++V Y+N G + A + M +
Sbjct: 47 YSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFAL 106
Query: 178 ---------------------------NSVTWVAMIAGYGKCGEVREAKKVFDEI----S 206
+ A++A YG G V EA+++FDE
Sbjct: 107 PVVLKCAPDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGG 166
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
E +A W M YV+N + AI +++ M R +E ++ACT D+E
Sbjct: 167 ERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQ 226
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ V ++ + +NAL+ M+SK G +++A F ++ DV+S+++ I+ HG
Sbjct: 227 VHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGH 286
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
AL++ L+M++ G+ PN T VL AC+ G G + M + + E +
Sbjct: 287 DHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVK--AVADFDEFVA 344
Query: 387 C-MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
+VD+ + G L+ A + D+ D W AL+ C
Sbjct: 345 VGLVDMYAKHGFLDDARK-VFDFMPRRDLILWNALISGC 382
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 192/457 (42%), Gaps = 75/457 (16%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S++ +HS+LLK+ H L +LP S AR VFD+IP
Sbjct: 17 SRSLFAGAHLHSHLLKSGLLAGFSNHLLT--LYSRCRLP----SAARAVFDEIPD-PCHV 69
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC------ARVPSLL--- 120
W+SL+ + + R ++L + M GV + F VL A+V +L
Sbjct: 70 SWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGAQVHALAVAT 129
Query: 121 ---------EAVICGYTKIGLMDDAQRLFDSM----AERNVISWSAMVAGY--------- 158
A++ Y G++D+A+R+FD ERN +SW+ M++ Y
Sbjct: 130 RLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDA 189
Query: 159 --------------------------ANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG 188
+++A ++ + + EK+ T A++
Sbjct: 190 IGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDM 249
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y K G++ A VF+++ D W A V +G+ A+E+ M+ + + +
Sbjct: 250 YSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTL 309
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+ AC G + + + + D +V+ L+ M++K G+LD A + F +
Sbjct: 310 SSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPR 369
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEG--IEPNQVTFIGVLTACSHGGLVEDGC 366
+D+I ++++I+ + G+ E L +F +MR EG ++ N+ T VL + + E C
Sbjct: 370 RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASS---EAIC 426
Query: 367 --KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
+Q + G+ + + ++D + GQL+ A
Sbjct: 427 HTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYA 463
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 185/447 (41%), Gaps = 85/447 (19%)
Query: 55 ARQVFDQ---IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
AR++FD+ + + W ++I +V + +I ++ +M G + F FS V+N
Sbjct: 154 ARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVN 213
Query: 112 ACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC L A++ Y+K+G ++ A +F+ M +V+S
Sbjct: 214 ACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVS 273
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSV------------------------------ 180
W+A ++G G+ A E +M V
Sbjct: 274 WNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMV 333
Query: 181 ---------TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
V ++ Y K G + +A+KVFD + D W A+ +G +
Sbjct: 334 KAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLS 393
Query: 232 MYKVMRQENV-----RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
++ MR+E + R + +++ + ++ + LA+ + ++V N L
Sbjct: 394 LFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIG---LLSDSHVINGL 450
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA--DHGKSQEALDMFLKMRNEGIEP 344
I + KCG LD A + F ++ D+IS ++M+TA + DHG ++A+ +F++M +G+EP
Sbjct: 451 IDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHG--EDAIKLFVQMLRKGLEP 508
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQF--ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
+ +L AC+ E G KQ L+ R F + +V + G +E A
Sbjct: 509 DSFVLSSLLNACTSLSAYEQG-KQVHAHLIKRQFTSDVFAGN--ALVYAYAKCGSIEDAD 565
Query: 403 SLIMDYKDFCDAG--TWGALLGACKVH 427
M + + G +W A++G H
Sbjct: 566 ---MAFSGLPERGIVSWSAMIGGLAQH 589
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 15/246 (6%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y +C A+ VFDEI +P W+++ Y NG + A+ ++ MR V +E A+
Sbjct: 47 YSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFAL 106
Query: 249 VGAISACTQL---GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ + V A+ + V + +V+NAL+ ++ G +D A R F
Sbjct: 107 PVVLKCAPDVRFGAQVHALAVATRLVHD------VFVANALVAVYGGFGMVDEARRMFDE 160
Query: 306 I----KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
++ +S+++MI+A+ + +S +A+ +F +M G PN+ F V+ AC+
Sbjct: 161 YVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRD 220
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+E G + + R G + +VD+ + G +E A + + + D +W A +
Sbjct: 221 LEAGRQVHGAVVRT-GYEKDVFTANALVDMYSKLGDIEMA-ATVFEKMPAADVVSWNAFI 278
Query: 422 GACKVH 427
C H
Sbjct: 279 SGCVTH 284
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 257/495 (51%), Gaps = 64/495 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +VFD + K + WT++I H ++ L + KM G+ + TF S+L AC+
Sbjct: 366 ALEVFDLV-KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424
Query: 115 RVPSLLE----------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
PS L+ A++ Y K G + DA R+F+ ++++NV++W+
Sbjct: 425 S-PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWN 483
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEK----NSVT------------------WV------- 183
AM+ Y A + + ++ NS T WV
Sbjct: 484 AMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA 543
Query: 184 ----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A+++ + CG++ AK +F+++ + D W + +VQ+G + A + +
Sbjct: 544 GLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF 603
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
K+M++ ++ ++ G ++AC + L + E D V LI M++KC
Sbjct: 604 KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKC 663
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G ++ A + F ++ K+V S++SMI +A HG+ +EAL++F +M+ EG++P+ +TF+G L
Sbjct: 664 GSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGAL 723
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
+AC+H GL+E+G F+ M + F I+P EH CMVDL GR+G L +A I+ + D
Sbjct: 724 SACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPD 782
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
+ WGALLGAC+VH+N EL E AA+ LEL P G +L+NIYA+ G WK+ ++ +
Sbjct: 783 SRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKV 842
Query: 474 ISETEKKKSPGCSWI 488
+ + K PG SWI
Sbjct: 843 MLDRGVVKKPGQSWI 857
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 185/395 (46%), Gaps = 49/395 (12%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KN 178
+I Y K G A+++FD M E++V SW+ ++ GY G + A + +++M + +
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210
Query: 179 SVTWVAMI---------------------AGYG--------------KCGEVREAKKVFD 203
T+V+M+ AG+ KCG++ +A KVFD
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
+ D W +M ++G K A +++ M +E V+ +VA V + AC +E
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+ + E D YV A++ M++KCG ++ A F +K ++V+S+++MI FA
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK-QFELMTRVFGIKPLT 382
HG+ EA F KM GIEPN+VTF+ +L ACS ++ G + Q ++ +G
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
T ++ + + G L+ AH + + + W A++ A H + + LL+
Sbjct: 451 R--TALLSMYAKCGSLKDAHR-VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK 507
Query: 443 LG--PEKTGNSALLANIYAS----MGKWKDSEIVK 471
G P + +++L +S +GKW I+K
Sbjct: 508 EGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMK 542
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 190/401 (47%), Gaps = 50/401 (12%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVI----SWSAMVAGYANCGNMKAAKEFYDRMTEK 177
AV+ +K G ++A ++ + + ++ ++SA++ N+ + Y+ + +
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 178 NSVTWVAM----IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ M I Y KCG AK++FD++ E D W + YVQ+G + A +++
Sbjct: 140 GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M Q++V+ + V ++AC +V+ L + + D +V ALI+MH KC
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A + F + +D+++++SMIT A HG+ ++A ++F +M EG++P++V F+ +L
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLL 319
Query: 354 TACSHGGLVEDGCKQFELMTRV-------FGIKPLTEHLTC------------------- 387
AC+H +E G K M V G L+ + C
Sbjct: 320 RACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVV 379
Query: 388 ----MVDLLGRSGQLEKAHSLIMDYKDFCDAG------TWGALLGACKVHVNAELGEIAA 437
M+ + G++++A + + ++G T+ ++LGAC + G+
Sbjct: 380 SWTAMIAGFAQHGRIDEA---FLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQ 436
Query: 438 RHLLE--LGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
H++E G + +ALL+ +YA G KD+ V IS+
Sbjct: 437 DHIIEAGYGSDDRVRTALLS-MYAKCGSLKDAHRVFEKISK 476
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 34/245 (13%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
GD +S A+ +F+ +PK + W ++I V H + + + M G+ TF+
Sbjct: 563 GDLMS-AKNLFNDMPK-RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTG 620
Query: 109 VLNACARVPSLLEA---------------------VICGYTKIGLMDDAQRLFDSMAERN 147
+LNACA +L E +I YTK G ++DA ++F + ++N
Sbjct: 621 LLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680
Query: 148 VISWSAMVAGYANCGNMKAAKE-FYDRMTEKNSVTWVAMIAGYGKC---GEVREAKKVFD 203
V SW++M+AGYA G K A E FY E W+ + C G + E F
Sbjct: 681 VYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQ 740
Query: 204 EIS----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+ EP + M + + G A+E M+ E A++G AC
Sbjct: 741 SMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG---ACQVHL 797
Query: 260 DVEMA 264
+VE+A
Sbjct: 798 NVELA 802
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 260/485 (53%), Gaps = 23/485 (4%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
TF L +VH ++++ Q Y A ++ L +++A +VF Q+ + L
Sbjct: 26 TFRDLLRVHGHVVRLRIS---QSSYLATQIVHLCN-AHRRVTHAARVFAQV-RDPNLHLH 80
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-------FTFSSVLNACARVPSLLEAVI 124
++I+ + + R ++ +Y +M R FT+ +L AC +L
Sbjct: 81 NAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAAL----- 135
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
++G + S + + I ++++ Y G++ A + +D M E++ V+W
Sbjct: 136 ----ELGKQVHTH-VVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ + + G++R+A +F+ + + W AM Y G A++ ++ M+ E
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPD 250
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+V++V + AC QLG +E+ + + + ++ NAL+ M++KCG +D A + F
Sbjct: 251 DVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFD 310
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVE 363
+ +KDVIS+S++I A HG++ EA+ +F +M EG + PN +TF+G+L+ACS+ GLV+
Sbjct: 311 GMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD 370
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G F+ M V+G++P EH C+VDLLGRSGQ+ +A L+ D DA WG+LL A
Sbjct: 371 EGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSA 430
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C+ H + + +AA L+EL P+ GN +LAN+YA+ +W D + I +K+P
Sbjct: 431 CRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTP 490
Query: 484 GCSWI 488
GCS I
Sbjct: 491 GCSLI 495
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 252/481 (52%), Gaps = 65/481 (13%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV-------------- 116
W+++I + + ++++ L +M G + T +SVL ACAR+
Sbjct: 14 WSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIHGYVT 73
Query: 117 -------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
P ++ ++ Y + M A ++F + +NV+S++ M+ GY GN++ AKE
Sbjct: 74 RHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKE 133
Query: 170 FYDRM--TEKNSVTWVAMIAGYG----KCGEVREAKKVFDEISEPDASCWAAMTVCY--- 220
+D+M K++++W +MI+GY KC +++ A+ FD ++E D + W + Y
Sbjct: 134 LFDQMELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWNVLISGYACC 193
Query: 221 --------------------------------VQNGYAKAAIEMYKVMRQENVRISEVAM 248
V+NG+ + A+ ++ M+ ++R ++
Sbjct: 194 NQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLR-PDIYT 252
Query: 249 VGAI-SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
VG I AC +L + + H + ++ AL+ M++KCG + A + ++RI
Sbjct: 253 VGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRIS 312
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
N +++S ++M+TA+A HG E + +F M G P+ VTF+ VL++C H G VE G +
Sbjct: 313 NPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHE 372
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F+LMT + + P +H TC+VDLL R+G+L++A+ L+ D+ WGALLG C +
Sbjct: 373 FFDLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIW 431
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N ELGEIAA L+EL P TGN LLAN+YA G+W D + + MI + KSPGCSW
Sbjct: 432 GNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSW 491
Query: 488 I 488
I
Sbjct: 492 I 492
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 118/262 (45%), Gaps = 22/262 (8%)
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
E S+P+ W+A+ + QNGY K A+E+ M+ + + + AC +L ++ +
Sbjct: 5 ENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNL 64
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+ +V +V N L+ ++ +C + A + FS K+V+SY++MI + +
Sbjct: 65 GKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCE 124
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
+G ++A ++F +M E + + +++ +++ G ++ K +L +TE
Sbjct: 125 NGNVEKAKELFDQM--ELVGKDTISWNSMIS-----GYADNLLKCEDLKAAQLAFDGVTE 177
Query: 384 HLTCMVDLLGRS----GQLEKAHSLIMDYKD---FCDAGTWGALLGACKVHVNAELGEIA 436
T ++L QLE +LI K + TW ++ HV E+A
Sbjct: 178 RDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISG---HVENGHNELA 234
Query: 437 ARHLLELGPEKTGNSALLANIY 458
R E+ S+L +IY
Sbjct: 235 LRLFTEM-----QTSSLRPDIY 251
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 122/308 (39%), Gaps = 60/308 (19%)
Query: 144 AERNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG----------- 188
++ N++SWSA++ G+A G K A E RM E N+ T +++
Sbjct: 7 SKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGK 66
Query: 189 ------------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
Y +C ++ A K+F S + + M V Y +NG
Sbjct: 67 EIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENG 126
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISA-------CTQLGDVEMAAILAKHVDEGCCD 277
+ A E++ M E V ++ IS C L ++A +G +
Sbjct: 127 NVEKAKELFDQM--ELVGKDTISWNSMISGYADNLLKCEDLKAAQLAF-------DGVTE 177
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKN----KDVISYSSMITAFADHGKSQEALDM 333
R N LI ++ C L+ ++K +V +++ +I+ ++G ++ AL +
Sbjct: 178 RDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRL 237
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F +M+ + P+ T +L AC+ + G KQ + G + +VD+
Sbjct: 238 FTEMQTSSLRPDIYTVGIILPACARLATIARG-KQVHAHSIRQGYELDVHIGAALVDMYA 296
Query: 394 RSGQLEKA 401
+ G ++ A
Sbjct: 297 KCGSIKHA 304
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 14/207 (6%)
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
+ W +I HV + H ++ L+ +M + +T +L ACAR+ ++
Sbjct: 216 YTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIAR------- 268
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
G A + E +V +A+V YA CG++K A + Y+R++ N V+ AM+
Sbjct: 269 --GKQVHAHSIRQGY-ELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTA 325
Query: 189 YGKCGEVREAKKVFDEI----SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
Y G E +F + PD + ++ V G + E + +M NV S
Sbjct: 326 YAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPS 385
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHV 271
+ ++ G ++ A L K +
Sbjct: 386 LKHYTCIVDLLSRAGRLDEAYELVKKI 412
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 259/482 (53%), Gaps = 15/482 (3%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R N+ +Q+H+++ K L D + + LI L G NL YAR VFD++ K
Sbjct: 564 RINALNEGEQMHNHITK-LGLLSDIF--VSNSLIHLYAACG-NLCYARSVFDEM-VVKDV 618
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
W SLI + F+ + L+ M GV T V++AC R+ Y+
Sbjct: 619 VSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGD--------YS 670
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
M + + D E +V + +V + G +++A++ + M +N VT AMIA
Sbjct: 671 MADYM--VRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAA 728
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y K ++ A+K+FD+I + D W++M Y Q + A+E+++ M++ V+ + +
Sbjct: 729 YAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVI 788
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+S+C LG +++ + ++V + N+LI M+ KCG A + F +K
Sbjct: 789 ASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKE 848
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
KD +S++S+I A++G +E+L++F M EG PN VTF+GVL AC++ LVE+G
Sbjct: 849 KDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDH 908
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
FE M R++ ++P +H C+VDLLGR+GQLEKA I + D W LLG+C H
Sbjct: 909 FESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHG 968
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ + EI + L EL P +GN LL+N YAS +W ++ V+ +++T+ +KSPGCS +
Sbjct: 969 DVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAV 1028
Query: 489 SS 490
+
Sbjct: 1029 EA 1030
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 221/429 (51%), Gaps = 17/429 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A QVFD+ P W +L++ + H + ++ L+ + R + F+ L ACA
Sbjct: 47 AHQVFDRRPTP-----WHALLKAYSHGPHPQDALQLF-RHARWHAADDTYAFTFALKACA 100
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
L C GL+ F + +A+V Y CG + ++ ++ M
Sbjct: 101 G----LGWPRCCMQLHGLVVRKGFEFQTYVH------TALVNVYILCGCLADSRMAFEEM 150
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
KN+V+W +I G+ GEV A+ +F+ + + W+ M Y + A+ +++
Sbjct: 151 PVKNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFR 210
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M E + SE+ ++ + A + +G + + L + ++ V N+LI +++K G
Sbjct: 211 RMMAEGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIG 270
Query: 295 YLDLAWREFSR-IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
+ + R F + ++++S++S+I+ FA HG S +A+++F MR GI PN++TF+ VL
Sbjct: 271 SIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVL 330
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
ACSHGGLVE G F+ M + I P +H C++D+LGR+G+L +A +I D+ +
Sbjct: 331 HACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVN 390
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
A W LLG C + E+GE + +L L E G+ +L+N+ + ++ D+EIV+ +
Sbjct: 391 ATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKL 450
Query: 474 ISETEKKKS 482
+ + KS
Sbjct: 451 VDQRNSVKS 459
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 202/439 (46%), Gaps = 82/439 (18%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
+K++H+Y + + HY ++R + +L +A +VFDQI + T FLW LI
Sbjct: 469 IKRLHAYYIVSGLY---NCHYAMSKVLRSYAILQPDLVFAHKVFDQI-EAPTTFLWNILI 524
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICGYTKIGLM 133
R +I Y K G++ TF +L ACAR+ +L E + TK+GL+
Sbjct: 525 RGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLL 584
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
D +F S ++++ YA CGN+ A+ +D M K+ V+W ++I GY +C
Sbjct: 585 SD---IFVS---------NSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCN 632
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
++ + ++K+M+ E V+ +V M+ +S
Sbjct: 633 RFKD-------------------------------ILALFKLMQNEGVKADKVTMIKVVS 661
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL----------------- 296
ACT+LGD MA + +++++ C + Y+ N L+ + G L
Sbjct: 662 ACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVT 721
Query: 297 ------------DL--AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
D+ A + F +I KD+IS+SSMI+ ++ +AL++F +M+ +
Sbjct: 722 MNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKV 781
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
+P+ + V+++C+H G ++ G K R IK T ++D+ + G ++A
Sbjct: 782 KPDAIVIASVVSSCAHLGALDLG-KWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEAL 840
Query: 403 SLIMDYKDFCDAGTWGALL 421
+ + K+ D +W +++
Sbjct: 841 QVFKEMKE-KDTLSWNSII 858
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 260/485 (53%), Gaps = 23/485 (4%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
TF L +VH ++++ Q Y A ++ L +++A +VF Q+ + L
Sbjct: 26 TFRDLLRVHGHVVRLRIS---QSSYLATQIVHLCN-AHRRVTHAARVFAQV-RDPNLHLH 80
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-------FTFSSVLNACARVPSLLEAVI 124
++I+ + + R ++ +Y +M R FT+ +L AC +L
Sbjct: 81 NAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAAL----- 135
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
++G + S + + I ++++ Y G++ A + +D M E++ V+W
Sbjct: 136 ----ELGKQVHTH-VVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ + + G++R+A +F+ + + W AM Y G A++ ++ M+ E
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPD 250
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+V++V + AC QLG +E+ + + + ++ NAL+ M++KCG +D A + F
Sbjct: 251 DVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFD 310
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVE 363
+ +KDVIS+S++I A HG++ EA+ +F +M EG + PN +TF+G+L+ACS+ GLV+
Sbjct: 311 GMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD 370
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G F+ M V+G++P EH C+VDLLGRSGQ+ +A L+ D DA WG+LL A
Sbjct: 371 EGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSA 430
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C+ H + + +AA L+EL P+ GN +LAN+YA+ +W D + I +K+P
Sbjct: 431 CRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTP 490
Query: 484 GCSWI 488
GCS I
Sbjct: 491 GCSLI 495
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 240/424 (56%), Gaps = 16/424 (3%)
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLM 133
+IR H + + LY +M + FT+S ++ CAR L E G G +
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLRE----GEQVHGRV 56
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
+ ++++ A+ GY ++ A+ +D + ++N V+W +++AGY +CG
Sbjct: 57 VANGYCTNVFVRTSLVNLYAIAGGY---DGVRKARRVFDEIVDRNIVSWNSLLAGYVRCG 113
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
+V A+++FDE+ E + W M Q G K A+ ++ MR+ V++ +VA+V A+S
Sbjct: 114 DVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALS 173
Query: 254 ACTQLGDVEMAAILAKHVDE----GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
AC +LGD+++ + ++DE G ++N+LIHM++ CG +D A++ F ++ +
Sbjct: 174 ACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQR 233
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIE---PNQVTFIGVLTACSHGGLVEDGC 366
IS++SMIT FA G ++EAL +F M+ G + P+ +TFIGVL ACSH G V+ G
Sbjct: 234 STISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGR 293
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
FE M + +GI P EH CMVDLL R+G L++AH LI + WGALLG C++
Sbjct: 294 HFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRI 353
Query: 427 HVNAELGEIAARHL-LELGPEK-TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
H NAEL A+ L LEL P++ G LL+N+YA+ +W+D +V+ + E +K G
Sbjct: 354 HKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAG 413
Query: 485 CSWI 488
SW+
Sbjct: 414 RSWV 417
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 263/536 (49%), Gaps = 101/536 (18%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A +F +P+ + Q W S++ H +++ +A MH+ G + + +TF+S L+
Sbjct: 102 LDEADSLFRSMPE-RDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLS 160
Query: 112 AC----------------ARVPSLLE-----AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC A+ P L + A++ Y+K G ++DAQ++FD M +RNV+S
Sbjct: 161 ACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVS 220
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG------------------ 188
W++++ Y G A + + M E + VT ++I+
Sbjct: 221 WNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVV 280
Query: 189 ------------------YGKCGEVREAKKVFD--------------------------- 203
Y KC ++EA+ +FD
Sbjct: 281 KMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAAR 340
Query: 204 ----EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+++E + W A+ Y QNG + A+ ++ ++++E+V + + AC L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLA 400
Query: 260 DVEMAAILAKHV-------DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
D+ + HV G D +V N+LI M+ KCG ++ + F ++ +D +
Sbjct: 401 DLHLGMQAHVHVLKHGFKFQSGEEDDI-FVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S+++MI FA +G EAL++F +M + G +P+ +T IGVL+AC H G VE+G F M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
TR FG+ PL +H TCMVDLLGR+G LE+A S+I + D+ WG+LL ACKVH N L
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITL 579
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
G+ A L E+ +G LL+N+YA +GKW D+ V+ ++ + K PGCSWI
Sbjct: 580 GKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWI 635
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 153/308 (49%), Gaps = 15/308 (4%)
Query: 97 LGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
L T F+ +L++C ++ V C + + S V + ++
Sbjct: 13 LSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASV---------IKSGFSNEVFIQNRLID 63
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
YA CG+++ ++ +D+M ++N TW +++ G K G + EA +F + E D W +M
Sbjct: 64 AYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
+ Q+ + A+ + +M +E ++E +SAC+ L D+ + + + C
Sbjct: 124 VSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPC 183
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
Y+ +AL+ M+SKCG ++ A + F + +++V+S++S+IT + +G + EAL +F
Sbjct: 184 LSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQV 243
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL---TCMVDLLG 393
M +EP++VT V++AC+ ++ G E+ RV + L + VD+
Sbjct: 244 MLESWVEPDEVTLASVISACASLSAIKVGQ---EVHARVVKMDKLRNDIILSNAFVDMYA 300
Query: 394 RSGQLEKA 401
+ ++++A
Sbjct: 301 KCSRIKEA 308
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 261/487 (53%), Gaps = 19/487 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
+V T +LKQ+H+ LL L P QF+ + +NL Y+ QV D
Sbjct: 15 MVEPCTTLRELKQIHTQLLINGLLNDPQ----LVGQFVASIALNNPNNLHYSNQVLDN-S 69
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAK-MHRLGVLTS-GFTFSSVLNACARVPSLLE 121
+ T F + S+IR H + +S Y++ +H G L +TF+ ++ R + L
Sbjct: 70 QNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLV----RTSAQLL 125
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A G + G +D + S ++ YA G + A + + E + V
Sbjct: 126 AHGTGSSVHGAAVKYGFEYDPHVQ------SGLIYMYAELGGLDACHRVFSSICEPDLVC 179
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
AM++ K G+V A+K+FD++S D W AM YVQ G ++ A+ ++ +M++E V
Sbjct: 180 QTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGV 239
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+++EV+MV +SAC+ LG ++ +++ T + ALI M++KCG ++ A
Sbjct: 240 KVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAME 299
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F +K K+V ++SS I A +G ++ L++F M+ + ++PN++TF+ VL CS GL
Sbjct: 300 VFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGL 359
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
VE+G K FE M++V+GI+P EH CMVDL GR+G L++A + I G WGALL
Sbjct: 360 VEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALL 419
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
ACK++ N E+GE+A+R ++EL + G LL+NIYA W V+ ++ +K
Sbjct: 420 NACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRK 479
Query: 482 SPGCSWI 488
PGCS I
Sbjct: 480 QPGCSVI 486
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 263/527 (49%), Gaps = 87/527 (16%)
Query: 24 LKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQ-------IPKC----------- 65
L +L KP ++A ++ Q P + + + FD IP C
Sbjct: 18 LSSLLKPT----FFASLSLQY-QSPNPSFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLT 72
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
T + SL+++ + + L+A+ V +GF F +V+ ++
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQ-----VCLAGFGFDTVIAT---------KLVN 118
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT---------- 175
Y + A+ LFD + + N+ W+ ++ GYA G +AA + Y +M
Sbjct: 119 LYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFT 178
Query: 176 -----------------------------EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
EK+ A+I Y KCG V A++VFD+I
Sbjct: 179 FPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKIL 238
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
DA W +M Y QNG+ A + + M +R +E +V AISA + AA+
Sbjct: 239 VRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISA-----SADNAAL 293
Query: 267 LAKHVDEGCCDRTNY-----VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
G R + V AL+ M++KCG + +A F R+ K V+S+++MIT +
Sbjct: 294 PQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGY 353
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
A HG + EALD+F +M N +P+ +TF+GVL+ACSHGGL+E+G FE M R + I P
Sbjct: 354 AMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPT 412
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
+H TCMVDLLG SG+L++A++LIM K D+G WGALL +CK+H N ELGEIA L+
Sbjct: 413 VQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLI 472
Query: 442 ELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL P+ GN +L+NIYA GKW+ ++ ++++ KKS CSWI
Sbjct: 473 ELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWI 519
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 260/485 (53%), Gaps = 23/485 (4%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
TF L +VH ++++ Q Y A ++ L +++A +VF Q+ + L
Sbjct: 26 TFRDLLRVHGHVVRLRIS---QSSYLATQIVHLCN-AHRRVTHAARVFAQV-RDPNLHLH 80
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-------FTFSSVLNACARVPSLLEAVI 124
++I+ + + R ++ +Y +M R FT+ +L AC +L
Sbjct: 81 NAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAAL----- 135
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
++G + S + + I ++++ Y G++ A + +D M E++ V+W
Sbjct: 136 ----ELGKQVHTH-VVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ + + G++R+A +F+ + + W AM Y G A++ ++ M+ E
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPD 250
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+V++V + AC QLG +E+ + + + ++ NAL+ M++KCG +D A + F
Sbjct: 251 DVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFD 310
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVE 363
+ +KDVIS+S++I A HG++ EA+ +F +M EG + PN +TF+G+L+ACS+ GLV+
Sbjct: 311 GMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD 370
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G F+ M V+G++P EH C+VDLLGRSGQ+ +A L+ D DA WG+LL A
Sbjct: 371 EGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSA 430
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C+ H + + +AA L+EL P+ GN +LAN+YA+ +W D + I +K+P
Sbjct: 431 CRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTP 490
Query: 484 GCSWI 488
GCS I
Sbjct: 491 GCSLI 495
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 270/533 (50%), Gaps = 67/533 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+HSYLLK + Y + + L + ++ A +F+ + LW ++
Sbjct: 265 KQLHSYLLKAGMS----FDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNV-VLWNLMLV 319
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA---------RVPSL-----LEA 122
+ + +S ++ +M G+ + FT+ +L C ++ SL E+
Sbjct: 320 AYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFES 379
Query: 123 -------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN--------------- 160
+I Y+K G +D A+++ + + +R+V+SW++M+AGY
Sbjct: 380 DMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQ 439
Query: 161 -----------------CGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKCGEVR 196
C +KA ++ Y + W ++ Y +CG
Sbjct: 440 DCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSE 499
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
EA +F EI D W + + Q+ K A+ ++ M Q + + + AISA
Sbjct: 500 EAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALA 559
Query: 257 QLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
L D++ + + V G T V+NALI ++ KCG ++ A FS + ++ +S++
Sbjct: 560 NLADIKQGKQVHGRAVKTGHTSETE-VANALISLYGKCGSIEDAKMIFSEMSLRNEVSWN 618
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
++IT+ + HG+ EALD+F +M+ EG++PN VTFIGVL ACSH GLVE+G F+ M+ V
Sbjct: 619 TIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNV 678
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
+G+ P+ +H C+VD+LGR+GQL++A + + +A W LL ACKVH N E+GE+
Sbjct: 679 YGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGEL 738
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA+HLLEL P + + LL+N YA GKW + + V+ M+ + +K PG SWI
Sbjct: 739 AAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWI 791
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 181/429 (42%), Gaps = 67/429 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
ARQVF ++ + W +++ + +++ LY++MH V+ + + SSVL+AC
Sbjct: 97 ARQVFKELSS-RDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACT 155
Query: 115 RVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ + A+I Y G A+R+F M + ++++
Sbjct: 156 KGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNT 215
Query: 154 MVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG--------------------- 188
+++G+A CG+ + A + +D M + VT +++A
Sbjct: 216 LISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAG 275
Query: 189 --------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y KCG++ A +F+ + W M V Y Q + E++
Sbjct: 276 MSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFG 335
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ + ++ + CT G +E+ + + + YVS LI M+SK G
Sbjct: 336 QMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYG 395
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
LD A + ++ +DV+S++SMI + H +EAL F +M++ G+ P+ + +
Sbjct: 396 CLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAAS 455
Query: 355 ACSHGGLVEDGCKQFELMTRVF--GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
AC+ + G ++ RV+ G +V+L R G+ E+A SL + +
Sbjct: 456 ACAGIKAMRQG---LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI-EHK 511
Query: 413 DAGTWGALL 421
D TW L+
Sbjct: 512 DEITWNGLI 520
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 8/242 (3%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y K G V +A++VF E+S D W AM Y Q+G K A +Y M V +
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPT 143
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+ +SACT+ ++ V + C T +V NALI ++ G LA R F
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSET-FVGNALIALYLGFGSFKLAERVF 202
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ D ++++++I+ A G + AL +F +M+ G+ P+ VT +L AC+ G ++
Sbjct: 203 CDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQ 262
Query: 364 DGCKQFE--LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G KQ L+ +TE ++DL + G +E AH I + D + W +L
Sbjct: 263 KG-KQLHSYLLKAGMSFDYITE--GSLLDLYVKCGDIETAHD-IFNLGDRTNVVLWNLML 318
Query: 422 GA 423
A
Sbjct: 319 VA 320
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 154/340 (45%), Gaps = 41/340 (12%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM------------ 174
Y K GL+ A+++F ++ R+ +SW AM++GYA G K A Y +M
Sbjct: 88 YAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVL 147
Query: 175 -------TEKN------------------SVTWV--AMIAGYGKCGEVREAKKVFDEISE 207
T+ S T+V A+IA Y G + A++VF ++
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLF 207
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D + + + Q G+ + A++++ M+ +R V + ++AC +GD++ L
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
++ + +L+ ++ KCG ++ A F+ +V+ ++ M+ A+
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++ ++F +M+ GI PNQ T+ +L C+ G +E G +Q ++ G +
Sbjct: 328 AKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELG-EQIHSLSIKNGFESDMYVSGV 386
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++D+ + G L+KA I++ + D +W +++ H
Sbjct: 387 LIDMYSKYGCLDKARK-ILEMLEKRDVVSWTSMIAGYVQH 425
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 260/512 (50%), Gaps = 63/512 (12%)
Query: 39 QFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRL 97
+ + +L + + YA VF + W S++R V R+++ Y +M R
Sbjct: 15 KLIAHVLSMGSLGVGYAYSVFAHTRELDV-LTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 98 GVLTSGFTFSSVLNACA-----RVPSLLEAVICGY----------------TKIGLMDDA 136
+ FTF S+L CA +V +L + Y G + A
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN------------------ 178
+ LF+ M RN + W++M++GY A Y +M E
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193
Query: 179 ---------------------SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
+V A++ Y KCG+++ A++VFD++S+ D W+A+
Sbjct: 194 KDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALI 253
Query: 218 VCYVQNGYAKAAIEMYK-VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
YV+N + A+++++ V N+R +EV ++ ISAC QLGD+E + ++
Sbjct: 254 FGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK 313
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+ ++N+LI M SKCG +D A R F + KD+IS++SM+ FA HG +EAL F
Sbjct: 314 GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRL 373
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M+ ++P+++TFIGVLTACSH GLV++G K F + ++G++ +EH CMVDLL R+G
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAG 433
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L +A I D WG++LGAC+V+ N ELGE AAR LL+L P G LL+N
Sbjct: 434 LLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSN 493
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
IYA W + + V+ +++E +K+PGCS +
Sbjct: 494 IYAKRKMWNEVKKVRELMNEKGIQKTPGCSSV 525
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 221/406 (54%), Gaps = 38/406 (9%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM---- 174
L+ +I Y K L++DA +LFD M +RNVISW+ M++ Y+ C + A E M
Sbjct: 50 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDG 109
Query: 175 --------------------------------TEKNSVTWVAMIAGYGKCGEVREAKKVF 202
E + A+I + K GE +A VF
Sbjct: 110 VRPNVYTYSSVLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVF 169
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
DE+ DA W ++ + QN + A+E++K M++ + + + ACT L +E
Sbjct: 170 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 229
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
+ + HV D+ ++NAL+ M+ KCG L+ A R F+++K +DVI++S+MI+ A
Sbjct: 230 LG--MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLA 287
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
+G SQEAL +F M++ G +PN +T +GVL ACSH GL+EDG F M +++GI P
Sbjct: 288 QNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGR 347
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
EH CM+DLLG++G+L+ A L+ + + DA TW LLGAC+V N L E AA+ ++
Sbjct: 348 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 407
Query: 443 LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L PE G +L+NIYA+ KW E ++ + + KK PGCSWI
Sbjct: 408 LDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWI 453
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 152/365 (41%), Gaps = 99/365 (27%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ A Q+FDQ+P+ + WT++I + ++++ L M R GV + +T+SSVL
Sbjct: 64 LNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLR 122
Query: 112 ACARVPSL-----------LE-------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
AC + + LE A+I + K+G +DA +FD M + I W++
Sbjct: 123 ACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 182
Query: 154 MVAGYANCGNMKAAKEFYDRM------TEKNSVTWV------------------------ 183
++ G+A A E + RM E+ ++T V
Sbjct: 183 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD 242
Query: 184 -------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
A++ Y KCG + +A++VF+++ E D W+ M QNGY++ A++++++M
Sbjct: 243 QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELM 302
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ + + + +VG + AC S G L
Sbjct: 303 KSSGTKPNYITIVGVLFAC-----------------------------------SHAGLL 327
Query: 297 DLAWREFSRIK-----NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
+ W F +K N Y MI GK +A+ + +M EP+ VT+
Sbjct: 328 EDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRT 384
Query: 352 VLTAC 356
+L AC
Sbjct: 385 LLGAC 389
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 106/251 (42%), Gaps = 68/251 (27%)
Query: 48 PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS 107
P D LS VFD++ +W S+I ++ ++ L+ +M R G + T +
Sbjct: 162 PEDALS----VFDEMVTGDA-IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT 216
Query: 108 SVLNACARVPSLLE--------------------AVICGYTKIGLMDDAQRLFDSMAERN 147
SVL AC + +LLE A++ Y K G ++DA+R+F+ M ER+
Sbjct: 217 SVLRACTGL-ALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERD 275
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVA------------------- 184
VI+WS M++G A G + A + ++ M T+ N +T V
Sbjct: 276 VITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 335
Query: 185 -----------------MIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMT-VCYVQNGY 225
MI GK G++ +A K+ +E+ EPDA W + C VQ
Sbjct: 336 SMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 395
Query: 226 AKAAIEMYKVM 236
A KV+
Sbjct: 396 VLAEYAAKKVI 406
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 21/151 (13%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
++ N LI+M+ K L+ A + F ++ ++VIS+++MI+A++ Q+AL++ + M +
Sbjct: 49 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 108
Query: 341 GIEPNQVTFIGVLTACS--------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
G+ PN T+ VL AC+ H G++++G + ++ R + ++D+
Sbjct: 109 GVRPNVYTYSSVLRACNGMSDVRMLHCGIIKEGLES-DVYVR-----------SALIDVF 156
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ G+ E A S + D DA W +++G
Sbjct: 157 AKLGEPEDALS-VFDEMVTGDAIVWNSIIGG 186
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 231/414 (55%), Gaps = 15/414 (3%)
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLM 133
+RN ++H +Y+ R+G + F S+ + ++I GY K G +
Sbjct: 46 FVRNSLIH--------MYSVCGRIGDARAMFEVCSISDLVT-----WNSMIDGYVKNGEI 92
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
A+ LF+ M ER++ SW++M+AGY G+M AA++ +++M ++ V+W MI GY +
Sbjct: 93 GAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQ 152
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
+ A ++F+ + + W M YV+ + M+ M E + +E +V ++
Sbjct: 153 NMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMP-NEATLVSVLT 211
Query: 254 ACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
AC LG ++ + ++ + + +S AL+ M++KCG +DLA F ++ N+ V+
Sbjct: 212 ACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVV 271
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++SMI + HG++ +AL+MFL M G PN TFI VL+AC+H G++ +G F+LM
Sbjct: 272 SWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLM 331
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
R + I+P EH CMVDLLGR+G ++ LI WGALL AC+ H N+EL
Sbjct: 332 RRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSEL 391
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
EI A+ L+EL P G LL+NIYA+ GKW D EIV+ M+ E K+ G S
Sbjct: 392 AEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGLS 445
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ AR VFD++ ++ W S+I + +H +++ ++ M + G + + TF VL+
Sbjct: 255 MDLARDVFDKMSN-RSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLS 313
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
ACA +LE G+ LM A ++ E V + MV G MK +E
Sbjct: 314 ACAHSGMILE----GWWYFDLMRRAYKI-----EPKVEHYGCMVDLLGRAGLMKDLEELI 364
Query: 172 DRMT-EKNSVTWVAMIA 187
+M E + W A+++
Sbjct: 365 RKMPMEGGTALWGALLS 381
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 251/486 (51%), Gaps = 49/486 (10%)
Query: 52 LSYARQVFDQIPKC-KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
L +R VF P T FL +L+R + L+A R+++ +++ M T F ++
Sbjct: 72 LPASRGVFASFPNPHATTFLPNTLLRAYALNALPREAVAVFSAMPHRDSFTYSFLIKALS 131
Query: 111 NA-----------CARVPSLLE-----AVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
+A ++ S+ + A+I Y+K G DA ++F+ M R+V+SW++
Sbjct: 132 SAGVAPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSA 191
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKK-------------- 200
+A G ++ A+ +D M EK++V+W ++ GY K G+V EA K
Sbjct: 192 MAAMVRQGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWS 251
Query: 201 -----------------VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+FD++ + W M QNG + A +++ M++ +V +
Sbjct: 252 TVVSGYCKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVEL 311
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
A+V ++AC + G + + + ++V R+ +V NALI M KCG ++ A F
Sbjct: 312 DVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVF 371
Query: 304 -SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
+ I KD +S++++I FA HG +ALD F +M+ +G P+ VT I VL+AC+H G V
Sbjct: 372 DTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFV 431
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G + F M R +G+ P EH CM+DLLGR G +++A LI + WG+LL
Sbjct: 432 EEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLS 491
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H N E EIA L +L P GN A+L++IYA GKW D +M + T +KS
Sbjct: 492 ACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKS 551
Query: 483 PGCSWI 488
G SWI
Sbjct: 552 SGSSWI 557
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 236/439 (53%), Gaps = 19/439 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +ARQ+FD++P+ + + S+I +V + G S ++
Sbjct: 176 LGFARQIFDRMPQ-RDSVSYNSMIDGYV----------------KCGSTESARELFDLMP 218
Query: 112 ACARVPSLLEAVICGYTKIGL-MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+ ++I GY + +D A +LF M ++++ISW++M+ GY G ++ AK
Sbjct: 219 EEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLISWNSMIDGYVKHGRIEDAKYL 278
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D M ++ VTW MI GY K G V +AK +FD++ D + +M YVQN Y A+
Sbjct: 279 FDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEAL 338
Query: 231 EMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
E++ M +E ++ E +V +SA QLG + A + ++ E + ALI M
Sbjct: 339 EIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDM 398
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+SKCG + A F I+NK + +++MI A HG + A DM L++ I+P+ +TF
Sbjct: 399 YSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITF 458
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+G+L ACSH GLV++G FELM R I+P +H CMVD+L RSG +E A +LI +
Sbjct: 459 VGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 518
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+ W L AC H E GE+ A+HL+ + LL+N+YAS GKWKD
Sbjct: 519 IEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEAGYNPSSYVLLSNLYASFGKWKDVRR 578
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ E + +K PGCSWI
Sbjct: 579 IRTIMKERKIEKVPGCSWI 597
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 188/389 (48%), Gaps = 47/389 (12%)
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV-ICGY 127
+LW ++I++H R+++LL+ M GV F+ S VL AC+R+ + E + I G+
Sbjct: 91 YLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGF 150
Query: 128 -TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
K GL D + + ++ Y CG + A++ +DRM +++SV++ +MI
Sbjct: 151 LKKTGLWSD------------LFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMI 198
Query: 187 AGYGKCGEVREAKKVFDEISE--PDASCWAAMTVCYVQNGYA-KAAIEMYKVMRQENVRI 243
GY KCG A+++FD + E + W +M Y Q A +++ M +++ I
Sbjct: 199 DGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDL-I 257
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
S +M+ ++ D AK++ + R + +I ++K G++ A F
Sbjct: 258 SWNSMIDGYVKHGRIED-------AKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLF 310
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLV 362
++ ++DV+SY+SMI + + + EAL++F M E + P++ T + VL+A + G +
Sbjct: 311 DQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRL 370
Query: 363 EDGC--------KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
KQF L ++ G+ ++D+ + G ++ A L+ +
Sbjct: 371 SKAMDMHLYIVEKQFFLGGKL-GV--------ALIDMYSKCGSIQHA-MLVFKGIENKSI 420
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLEL 443
W A++G +H LGE A LL++
Sbjct: 421 DHWNAMIGGLAIH---GLGESAFDMLLQI 446
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
D W A+ + + A+ ++ +M + V + + ++ + AC++LG V+ +
Sbjct: 89 DXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIH 148
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
+ + ++ N LI ++ KCG+L A + F R+ +D +SY+SMI + G ++
Sbjct: 149 GFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTE 208
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT-- 386
A ++F M E N +++ +++ + DG ++ +++F P + ++
Sbjct: 209 SARELFDLMPEE--MKNLISWNSMISGYAQ---TSDGV---DIASKLFSEMPDKDLISWN 260
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
M+D + G++E A L D D TW ++
Sbjct: 261 SMIDGYVKHGRIEDAKYL-FDVMPRRDVVTWSTMI 294
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 210/362 (58%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
Y +G +D + LF +V W+A++ G+A G++ +A++ +D M EK+ V+ AM+
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAML 131
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
Y K GE+ A+ +FD + E D CW M Y QNG A+ +++ M + + +EV
Sbjct: 132 TCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEV 191
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
++ +SAC QLG +E + +++ +V AL+ M+SKCG L+ A F +I
Sbjct: 192 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI 251
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
+KDV++++SMI +A HG SQEAL +F M G+ P +TFIG+L+AC H G V +G
Sbjct: 252 DDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGW 311
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
F M +GI+P EH CMV+LLGR+G +E+A+ L+ + D WG LLGAC++
Sbjct: 312 DIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 371
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H LGE L++ +G LL+NIYA++G W ++ M+ ++ KK PGCS
Sbjct: 372 HGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCS 431
Query: 487 WI 488
I
Sbjct: 432 SI 433
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 166/412 (40%), Gaps = 105/412 (25%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ +SKT + L Q+H+ L + H ++ Q L L Y+ +F + +
Sbjct: 36 LIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASL----GRLDYSVALFGRT-QN 90
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
+ F WT++I H L + L+ M +++ L A++
Sbjct: 91 PSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVS------------------LTAMLT 132
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVT 181
Y K G +D A+ LFD M ER+ + W+ M+ GY G A + RM + N VT
Sbjct: 133 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVT 192
Query: 182 ------------------WV-----------------AMIAGYGKCGEVREAKKVFDEIS 206
WV A++ Y KCG + +A+ VFD+I
Sbjct: 193 VLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 252
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
+ D W +M V Y +G+++ A++++K M + + + + +G +SAC
Sbjct: 253 DKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACG---------- 302
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS-----YSSMITAF 321
HS G++ W F+++K++ I Y M+
Sbjct: 303 -----------------------HS--GWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL 337
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
G ++A ++ ++N IEP+ V + +L AC G + G K EL+
Sbjct: 338 GRAGHVEQAYEL---VKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLV 386
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 131/291 (45%), Gaps = 37/291 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR +FD + + + W +I + + ++++L+ +M + + T SVL+
Sbjct: 140 LDAARVLFDGMEE-RDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLS 198
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC ++ +L A++ Y+K G ++DA+ +FD + +++V++
Sbjct: 199 ACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVA 258
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
W++M+ GYA G + A + + M ++T++ +++ G G V E +F+++
Sbjct: 259 WNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMK 318
Query: 207 -----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
EP + M + G+ + A E+ K M N+ V + AC G +
Sbjct: 319 DEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM---NIEPDPVLWGTLLGACRLHGKI 375
Query: 262 EMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ I+ VD+ + Y+ L ++++ G D R + +K+ V
Sbjct: 376 ALGEKIVELLVDQNLANSGTYI--LLSNIYAAVGNWDGVARLRTMMKDSGV 424
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 261/485 (53%), Gaps = 47/485 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-----SGFTF 106
++ AR++FD+ K+ +WT+++ ++ ++ L+ +M V++ G+
Sbjct: 92 INEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYAR 151
Query: 107 S----SVLNACARVPSL----LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
+ L+ R+P V+ G +DDA+RLF+ M ER+V+SW+ MVAG
Sbjct: 152 NGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGL 211
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
+ G + AA+E +D+M +N V+W AMIAGY + G EA K+F+ + E D W M
Sbjct: 212 SKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVT 271
Query: 219 CYVQNGYAKAAIEMYKVMRQENV-------------RISEVAM----------------- 248
++QNG A +++ M Q+NV +SE A+
Sbjct: 272 GFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTG 331
Query: 249 --VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR- 305
V + AC+ L + + + + + + YV +ALI+M+SKCG +A + F
Sbjct: 332 TFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDG 391
Query: 306 -IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+ D+I+++ MI A+A HG EA+++F KM+ G + N VT++G+LTACSH GL ++
Sbjct: 392 LSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDE 451
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G K F+ + + I+ +H TC++DL GR+G+L++A ++I WGALL C
Sbjct: 452 GFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGC 511
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
VH NA++G++ A +L++ PE L +N+YAS+G +++ V+M + + KK PG
Sbjct: 512 SVHGNADIGKLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPG 571
Query: 485 CSWIS 489
CSWI
Sbjct: 572 CSWID 576
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/490 (32%), Positives = 259/490 (52%), Gaps = 23/490 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
++ R T LKQ+H + T + L+R L L YAR++FD P
Sbjct: 15 VLSRCATLAHLKQLHGRSVVTARAASQSTTFQ---LLRFASLRLSCLPYARRLFDSTPH- 70
Query: 66 KTQFLWTSLIRNHVLHAHF----RQSILLYAKMHRLG-VLTSGFTFSSVLNA-CARVPSL 119
FL+++++ + + ++ L+ +M R G + F + VL A CA L
Sbjct: 71 PNVFLYSAMLSAYAAASPAQAYGHDALALFLRMLRRGRPAPNQFVYPLVLRAACAIGVQL 130
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
+ ++ K G +D + ++++ GY+ G M A++ +D +TE+N
Sbjct: 131 VRSIHSHACKSGF-----HAYDVIR-------TSLLDGYSRYGMMLDARKLFDGLTERNV 178
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
++W A+++GY + G++ +A +FD + E D + W AM QNG A+ + M E
Sbjct: 179 ISWTALVSGYARAGKIGDAIVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRMVDE 238
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+++ + +SAC LG +++ ++ + C + V N LI M+ KCG L A
Sbjct: 239 GFQLNGTTVSCVLSACGHLGMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMYGKCGNLKEA 298
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F ++ + +++S+I A HG S+ A+ +F +MR+EGIEP+ VTF+G+L AC+HG
Sbjct: 299 RWMFDEFSDRSLTTWNSLINCLALHGHSKSAIAVFDEMRDEGIEPDVVTFVGLLNACTHG 358
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
G V++G F+LM I+P EH C+VDLLGR+G+ E A ++I D K D WG+
Sbjct: 359 GFVDEGLTYFKLMCDELRIEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGS 418
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SEIVKMMISETE 478
LL AC+ H EL E + R LL+L P +LAN+Y+ G W++ ++I K+M +
Sbjct: 419 LLNACRTHRQLELAEFSVRKLLQLNPNNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIM 478
Query: 479 KKKSPGCSWI 488
KK PGCSWI
Sbjct: 479 GKKLPGCSWI 488
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 274/570 (48%), Gaps = 100/570 (17%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S NQLKQ+ + ++ +Y IR L L + YARQVFDQIP Q
Sbjct: 12 SLPINQLKQIQALIII-------KYLSLTPLFIRRL-LNASFIQYARQVFDQIPH-PDQG 62
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA---------RVPSLL 120
+ S I + + +++ + MH+ V FT + +CA +V SL+
Sbjct: 63 VHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLV 122
Query: 121 -------------------------------------------EAVICGYTKIGLMDDAQ 137
+I Y++ G + A+
Sbjct: 123 IRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAAR 182
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAA----KEFYDRMTEKNSVTW----------- 182
LFD M +R+++SW+AM++ YA G+ + D M E N +T
Sbjct: 183 ELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLG 242
Query: 183 ------------------------VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
AM+ Y KCG V + + VFD ++ D W+AM
Sbjct: 243 DLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIA 302
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
Y QNG + A+E+++ M+ ++ ++V +V +SAC QLG VE + +V+
Sbjct: 303 GYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLIS 362
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
YV++AL+ M+SKCG + A + F ++ +D ++++SMI A +G +++A+ ++ +M+
Sbjct: 363 NVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMK 422
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
++PN +TF+G++TAC+H G VE G + F M I P EH C+VDL RSG+L
Sbjct: 423 EIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRL 482
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
A+ I + + WG LL A ++H+N EL E+A + LLEL P+ +GN +L+NIY
Sbjct: 483 IDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIY 542
Query: 459 ASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AS G+W+++ V+ ++ + +K+ SW+
Sbjct: 543 ASAGRWQEALKVRKLMKDKRVQKAAAYSWV 572
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 255/483 (52%), Gaps = 28/483 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--DNLSYARQVFDQIPKCKTQ 68
K+ L Q+H++ L+ H Q L + + + ++YA ++F Q
Sbjct: 20 KSRTHLTQIHAHFLR------HGLHQSNQILAHFISVCASFNRIAYADRLFSQSHN-PNI 72
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
FL+ S+I+ H L F QS+LL++ M ++ +TF+ +L +CA +C Y+
Sbjct: 73 FLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCAN--------LCEYS 124
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAG----YANCGNMKAAKEFYDRMTEKNSVTWVA 184
Q + + R + ++ G Y C M+ A + +D M+ ++ V W
Sbjct: 125 L------GQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNL 178
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
MI G+ K G V +F ++SE W + C QN A+E+++ M + +
Sbjct: 179 MIRGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPD 238
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVD-EGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
EV +V + C++LG +E+ + + +G V N+LI + KCG ++ A+ F
Sbjct: 239 EVTVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIF 298
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
++ K V+S++++I FA +GK + A+D+F++MR E ++PN TF+ VLTAC H GL+E
Sbjct: 299 QKMTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLE 358
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G + F M + I+P EH CMVDLLGR G +E+AH LI +A WGA+LGA
Sbjct: 359 KGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGA 418
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C+ H N +L E+A + L+ L P +GN LL+N+ A G+W++ E V+ + E KK+P
Sbjct: 419 CRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAP 478
Query: 484 GCS 486
G S
Sbjct: 479 GQS 481
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 270/527 (51%), Gaps = 67/527 (12%)
Query: 17 KQVHSY-LLKTL-TKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
+Q HS+ +L TL + D YH A I L G + AR++FD++ K W S+
Sbjct: 11 RQRHSFFVLATLFSSTRDVYH--ANLDIVALSRAG-KVDAARKLFDEM-ATKDVVTWNSM 66
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA------------ 122
+ + + ++S L+ M V++ ++S++ AC + +L +A
Sbjct: 67 LSAYWQNGLLQRSKALFHSMPLRNVVS----WNSIIAACVQNDNLQDAFRYLAAAPEKNA 122
Query: 123 -----VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC-GNMKAAKEFYDRMTE 176
+I G + G M DAQRLF++M NV+S++AMV GYA G + A+ ++ M
Sbjct: 123 ASYNAIISGLARCGRMKDAQRLFEAMPCPNVVSYTAMVDGYARVEGGIGRARALFEAMPR 182
Query: 177 KNSVTWV-------------------------------AMIAGYGKCGEVREAKKVFDEI 205
+NSV+WV AMI G+ K G + +A+ +F EI
Sbjct: 183 RNSVSWVVMINGLVENGLCEEAWEVFVRMPQKNDVARTAMITGFCKEGRMEDARDLFQEI 242
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA- 264
D W + Y QNG + A+ ++ M + ++ ++ V AC L +E
Sbjct: 243 RCRDLVSWNIIMTGYAQNGRGEEALNLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGS 302
Query: 265 ---AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
A+L KH D V NALI +HSKCG + + F +I + D++S++++I AF
Sbjct: 303 KAHALLIKH----GFDSDLSVCNALITVHSKCGGIVDSELVFGQISHPDLVSWNTIIAAF 358
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
A HG +A F +M ++P+ +TF+ +L+AC G V + F LM +GI P
Sbjct: 359 AQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSACCRAGKVNESMNLFSLMVDNYGIPPR 418
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
+EH C+VD++ R+GQL++A +I + D+ WGA+L AC VH+N ELGE+AAR +L
Sbjct: 419 SEHYACLVDVMSRAGQLQRACKIINEMPFKADSSIWGAVLAACSVHLNVELGELAARRIL 478
Query: 442 ELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L P +G +L+NIYA+ GKWKD +++++ E KK SW+
Sbjct: 479 NLDPFNSGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWL 525
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 271/533 (50%), Gaps = 64/533 (12%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGD----NLSYARQVFDQIPKCKT 67
T + Q+H+ +KT + H RLL L D NL YA +FD I + T
Sbjct: 27 TEREANQLHALSIKTASLNHPSVSS------RLLALYADPRINNLQYAHSLFDWIQE-PT 79
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-------- 119
W LI+ ++ + +I L+ K+ + FT VL CAR+ +L
Sbjct: 80 LVSWNLLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQIHG 138
Query: 120 -------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN--- 163
L +++ Y+K G ++ +++FD M +++V+SW++++ GYA CG
Sbjct: 139 LVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIEL 198
Query: 164 ----------------------------MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
++AA++ +DRM +NSV+W AMI GY K G+
Sbjct: 199 ALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDS 258
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
AK++FD++ E W +M Y +N A+++++VM +E++ + ++GA+SA
Sbjct: 259 NTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAA 318
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
+ + + + ++ + + LI M+SKCG + A R F I K + ++
Sbjct: 319 SGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWT 378
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
S+I HG ++ L++F +M G++P+ +TFIGVL ACSH G ED + F++MT
Sbjct: 379 SVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYD 438
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
+GIKP EH C++D+L R+G LE+A I + W +LL + H N +GE
Sbjct: 439 YGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEY 498
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA+HL++L P+ TG +L+N+YA+ G W+ V+ M+ + KK PGCS I
Sbjct: 499 AAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSI 551
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVA----MIAGYG--KCGEVREAKKVFDEISEPDASCW 213
NCG + A + + + S+ + ++A Y + ++ A +FD I EP W
Sbjct: 24 NCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSW 83
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+ CY++N + AI ++ + + V S + + C +LG ++ + V +
Sbjct: 84 NLLIKCYIENQRSNDAIALFCKLLCDFVPDS-FTLPCVLKGCARLGALQEGKQIHGLVLK 142
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+V ++L+ M+SKCG ++L + F R+++KDV+S++S+I +A G+ + AL+M
Sbjct: 143 IGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEM 202
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
F +M E + ++ ++ S G +E F+ M
Sbjct: 203 FEEMP----EKDSFSWTILIDGLSKSGKLEAARDVFDRM 237
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 269/497 (54%), Gaps = 42/497 (8%)
Query: 6 LVPRSKTFNQLKQVHSYLL-----KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFD 60
L + NQ +Q+H++L+ K + + H Y++ L+YA+++F+
Sbjct: 488 LCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSEC---------GRLNYAKEIFN 538
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
++ + + + W S+I + + ++++ L+ +M G+ F+ SS+L++C
Sbjct: 539 RMAE-RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS----- 592
Query: 121 EAVICGYTKIGLMDDAQR--------LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ D+Q+ + ++M E ++ +V YA CG+M A + YD
Sbjct: 593 ------------LSDSQKGRELHNFIVRNTMEEEGILQ-VVLVDMYAKCGSMDYAWKVYD 639
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+ +K+ + M++ + G +AK +FD++ + + + W ++ Y G K +
Sbjct: 640 QTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNH 699
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL-AKHVDEGCCDRTNYVSNALIHMHS 291
+ M + ++ + MV ++ C+ L +E L + + +G + + + AL+ M+S
Sbjct: 700 FLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYS 759
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG + A F + K+++S+++MI+ ++ HG S+EAL ++ +M +G+ PN+VTF+
Sbjct: 760 KCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLA 819
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+L+ACSH GLVE+G + F M + I+ EH TCMVDLLGR+G+LE A +
Sbjct: 820 ILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIE 879
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
+ TWGALLGAC+VH + ++G +AA+ L EL P+ G +++NIYA+ G+WK+ E ++
Sbjct: 880 PEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIR 939
Query: 472 MMISETEKKKSPGCSWI 488
M+ KK PG SWI
Sbjct: 940 QMMKMKGVKKDPGVSWI 956
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 190/415 (45%), Gaps = 73/415 (17%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-----DNLSYARQVFDQIPK 64
S +F + K +H+ ++ P A + ++L L D+L YAR++F+++P+
Sbjct: 84 SNSFQRGKSIHTQMISNGYNPD------AYLMTKILMLYARSGCLDDLCYARKLFEEMPE 137
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----- 119
+ W ++I + + + + LY +M G + FTF SV+ AC + +
Sbjct: 138 -RNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQ 196
Query: 120 LE----------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
L+ A++ GY + G MDDA D + +V++W+A++AGY +
Sbjct: 197 LQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILS 256
Query: 164 MKAAKEFYDRMTE----KNSVTWV-----------------------------------A 184
+ A +DRM + ++ T+ A
Sbjct: 257 WEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNA 316
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y KC + KVFDE+ E + W ++ Q G+ A+ ++ M++ + +
Sbjct: 317 LIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSN 376
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ + A L D+ L H+ + + +AL+ M+SKCG ++ A + F
Sbjct: 377 RFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFR 436
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSH 358
+ ++ +SY++++ + GK++EAL+++ M++E GI+P+Q TF +LT C++
Sbjct: 437 SLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCAN 491
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 159/347 (45%), Gaps = 61/347 (17%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-------LEAV 123
W ++I +V + ++ ++ +M ++GV FTF+S L C + S + +
Sbjct: 244 WNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 303
Query: 124 ICGY---TKIGLM--------DDAQ---RLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
CG+ T +G DD + ++FD M ERN ++W+++++ A G+ A
Sbjct: 304 ACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALV 363
Query: 170 FYDRMTEK-------------------------------------NS--VTWVAMIAGYG 190
+ RM E NS + A++ Y
Sbjct: 364 LFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYS 423
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMV 249
KCG V EA +VF + E + + A+ YVQ G A+ A+E+Y M+ E+ ++ +
Sbjct: 424 KCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFT 483
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
++ C + + H+ + V L+HM+S+CG L+ A F+R+ +
Sbjct: 484 TLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER 543
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
+ S++SMI + +G++QEAL +F +M+ GI+P+ + +L++C
Sbjct: 544 NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 590
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 121/288 (42%), Gaps = 11/288 (3%)
Query: 144 AERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS------VTWVAMIAGYGKC-GEVR 196
++ N + +S+++ + + + K + +M +T + M+ C ++
Sbjct: 67 SDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLC 126
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
A+K+F+E+ E + + W M + Y + + +Y MR + I AC
Sbjct: 127 YARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACI 186
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
+ D+ L V + + +V AL+ +++ G++D A I+ V+++++
Sbjct: 187 AMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNA 246
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL-VEDGCKQFELMTRV 375
+I + +EA +F +M G+ P+ TF L C G L DG KQ
Sbjct: 247 VIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVC--GALRSRDGGKQVHSKLIA 304
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G K T ++D+ + E++ + D + TW +++ A
Sbjct: 305 CGFKGDTFVGNALIDMYAKCDD-EESCLKVFDEMGERNQVTWNSIISA 351
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/577 (29%), Positives = 283/577 (49%), Gaps = 97/577 (16%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPK 64
L+ KT L+ +H+ ++KT H+ + ++ L + P D L YA VF+ I +
Sbjct: 39 LLHNCKTLQSLRLIHAQMIKT--GLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQE 96
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--- 121
+W ++ R H L + ++ LY M LG+L + +TF +L +CA+ + E
Sbjct: 97 -PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQ 155
Query: 122 -------------------------------------------------AVICGYTKIGL 132
A+I GY G
Sbjct: 156 IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGY 215
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN-------------- 178
++ AQ+LFD + ++V+SW+AM++GYA GN K A E + M + N
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275
Query: 179 -----SV-------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCW 213
S+ +W+ +++ Y KCGE+ A +F+ + D W
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+ Y K A+ +++ M + R ++V M+ + AC LG +++ + ++D+
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 274 GCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
TN S +LI M++KCG ++ A + F+ I +K + S+++MI FA HG++ A
Sbjct: 396 RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAF 455
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
D+F +MR GIEP+ +TF+G+L+ACS G+++ G F MT+ + I P EH CM+DL
Sbjct: 456 DIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDL 515
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
LG SG ++A +I + + D W +LL ACK+ N ELGE A++L+++ PE G
Sbjct: 516 LGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCY 575
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYA+ G+W + ++ ++++ KK PGCS I
Sbjct: 576 VLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSI 612
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 260/476 (54%), Gaps = 22/476 (4%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H+ ++++L + Y A LI L G + A++VF+ + + WT LI
Sbjct: 290 KQLHAKVIRSLPQIDP---YVASALIELYAKCG-SFKEAKRVFNSLQD-RNSVSWTVLIG 344
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ + F +S+ L+ +M + F +++++ C + ++ L
Sbjct: 345 GSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-------------FNRMDLCLGR 391
Query: 137 QR---LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
Q S R ++ +++++ YA CG+++ A+ + M+E++ V+W +MI Y + G
Sbjct: 392 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 451
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAI 252
+ +A++ FD ++ +A W AM Y+Q+G + ++MY M Q++V V V
Sbjct: 452 NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 511
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
C +G ++ + H + V+NA I M+SKCG + A + F + KDV+
Sbjct: 512 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVV 571
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S+++MIT ++ HG ++A F M ++G +P+ ++++ VL+ CSH GLV++G F++M
Sbjct: 572 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 631
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
TRV GI P EH +CMVDLLGR+G L +A LI A WGALL ACK+H N EL
Sbjct: 632 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDEL 691
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+AA+H+ EL +G+ LLA IY+ GK DS V+ ++ + KK+PG SW+
Sbjct: 692 AELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWM 747
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 145/307 (47%), Gaps = 12/307 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSV 109
+LS A ++FD++P+ + W +L+ + F + + MHR G L + FTF V
Sbjct: 86 SLSDAEELFDRMPR-RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCV 144
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+ +C A+ C L+ + FD + +V +A+V + CG + A
Sbjct: 145 MKSCG-------ALGCRELAPQLLGLFWK-FDFWGDPDV--ETALVDMFVRCGYVDFASR 194
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ ++ +M+AGY K + A + F++++E D W M Q+G + A
Sbjct: 195 LFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREA 254
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ + M ++ VR+ +++AC +L + L V YV++ALI +
Sbjct: 255 LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG A R F+ +++++ +S++ +I + +++++F +MR E + +Q
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 350 IGVLTAC 356
+++ C
Sbjct: 375 ATLISGC 381
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 146/313 (46%), Gaps = 16/313 (5%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDS-MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
L ++ Y G + DA+RL + + E NVI+ + M+ GYA G++ A+E +DRM +
Sbjct: 41 LQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRR 100
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN-----GYAKAAIEM 232
+ +W +++GY + + + F + S A T C V G + A ++
Sbjct: 101 DVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQL 160
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ + + + + G V+ A+ L ++ T + N+++ ++K
Sbjct: 161 LGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER----PTIFCRNSMLAGYAK 216
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
+D A F + +DV+S++ MI A + G+ +EAL + ++M +G+ + T+
Sbjct: 217 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 276
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQLEKAHSLIMDYKD 410
LTAC+ L G + +L +V P + + +++L + G ++A + +D
Sbjct: 277 LTACAR--LFSLGWGK-QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 333
Query: 411 FCDAGTWGALLGA 423
++ +W L+G
Sbjct: 334 R-NSVSWTVLIGG 345
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 50/200 (25%)
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF-SR 305
A+ A+ +C G + A L + ++ N L+H + CG L A R +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRN--------------------EGIE-- 343
IK +VI+++ M+ +A G +A ++F +M +G+E
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 344 ----------PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI--------KPLTEHL 385
PN TF V+ +C G L GC+ EL ++ G+ P E
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSC--GAL---GCR--ELAPQLLGLFWKFDFWGDPDVE-- 176
Query: 386 TCMVDLLGRSGQLEKAHSLI 405
T +VD+ R G ++ A L
Sbjct: 177 TALVDMFVRCGYVDFASRLF 196
>gi|325260825|gb|ADZ04643.1| hypothetical protein [Oryza punctata]
Length = 674
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 253/462 (54%), Gaps = 29/462 (6%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++S AR+VFD +P+ ++ WTS+IR +V +LL+ M R GV + T S VL
Sbjct: 210 SVSEARRVFDAMPE-RSVVSWTSMIRGYVKRGMCSDGLLLFLNMRREGVQVNATTLSVVL 268
Query: 111 NACA---------RVPSLL------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA ++ +L+ ++VI Y++ G M DAQR F+ M +++++
Sbjct: 269 DACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIV 328
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
SW++++ GY ++ A + M +K++V+W +M+ G+ G +RE+ ++F+++ D
Sbjct: 329 SWNSLITGYVQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKD 388
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILA 268
W A+ ++ NG +A+ + M QE + + + +SA L + A
Sbjct: 389 VVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAMLNQGRQAHA 448
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
++ G + V +LI M++KCG L A FS I N +I+ +SMITAF HG ++
Sbjct: 449 YSINMGWVFDSA-VHTSLISMYAKCGRLAEAHHVFSSISNPSLIAINSMITAFVQHGFAE 507
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
+AL +F KM+N G +PN VTF+G+LT C+ G V+ G FE M V+G++P EH TCM
Sbjct: 508 DALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCM 567
Query: 389 VDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
VDLLGR+G L +A +I M D DA W ALL A +H N +IAA+ LLE P
Sbjct: 568 VDLLGRAGLLAEALEMINSMPQNDHSDA--WAALLSASSLHSNLAFAKIAAQKLLEKDPY 625
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L+ +++S G + E+ K++ K PG S I
Sbjct: 626 DATAYTVLSKMFSSAGM-EYEEMQKVVQLSNMASKRPGYSLI 666
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 170/360 (47%), Gaps = 22/360 (6%)
Query: 98 GVLTSGFTFSSVLNACARVPSL--LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
G ++ F S V R P+ L A++ Y + G + DAQ LFD M R+VISW+A++
Sbjct: 17 GGVSHRFPASEVEPPPPRGPNRAHLNALLTAYGRRGRLRDAQLLFDQMPSRDVISWTALL 76
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
YA+ G++ +A+ +D M +N+ +W A+++ Y + R A +F ++ +A + A
Sbjct: 77 TAYADGGDLASARLVFDDMPRRNAPSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGA 136
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQE--NVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+ + G + A +Y+ M Q+ + S M G + ++G++ MA V E
Sbjct: 137 IISGLAKAGMLREAELVYEEMPQQWRDPVGSNALMAGYL----RVGELAMAL----RVFE 188
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
G R +A++ K G + A R F + + V+S++SMI + G + L +
Sbjct: 189 GMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERSVVSWTSMIRGYVKRGMCSDGLLL 248
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV-FGIKP-LTEHLTCMVDL 391
FL MR EG++ N T VL AC+ L +G + L+ + F + L + + M
Sbjct: 249 FLNMRREGVQVNATTLSVVLDACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSR 308
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
G ++A + M KD +W +L+ H E + L +L P+K S
Sbjct: 309 FGWMADAQRAFN-CMQQKDIV---SWNSLITGYVQHDMVEEAHV----LFKLMPQKDAVS 360
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 184/408 (45%), Gaps = 64/408 (15%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH-----RLGVLTSG 103
G +L+ AR VFD +P+ + W +L+ ++ A R + L+ KM G + SG
Sbjct: 82 GGDLASARLVFDDMPR-RNAPSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISG 140
Query: 104 FTFSSVLNACA----------RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L R P A++ GY ++G + A R+F+ M R+VISWSA
Sbjct: 141 LAKAGMLREAELVYEEMPQQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSA 200
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY---GKCGE---------------- 194
MV G G++ A+ +D M E++ V+W +MI GY G C +
Sbjct: 201 MVDGLCKHGSVSEARRVFDAMPERSVVSWTSMIRGYVKRGMCSDGLLLFLNMRREGVQVN 260
Query: 195 ----------------VREAKKVFDEI----SEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
RE ++ + I E D ++ + Y + G+ A +
Sbjct: 261 ATTLSVVLDACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFN 320
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+Q+++ V+ I+ Q VE A +L K + + D ++ S ++ + G
Sbjct: 321 CMQQKDI----VSWNSLITGYVQHDMVEEAHVLFKLMPQK--DAVSWTS--MVVGFANRG 372
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
++ + F ++ KDV++++++I++F +G A+ F +M EG +PN +TF +L+
Sbjct: 373 WMRESVELFEQMPVKDVVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLS 432
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
A + ++ G + + + H T ++ + + G+L +AH
Sbjct: 433 ALASLAMLNQGRQAHAYSINMGWVFDSAVH-TSLISMYAKCGRLAEAH 479
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 258/480 (53%), Gaps = 26/480 (5%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
QVH+ + K+ PH + Y L+ + + P + AR+VF+ +P+ + W SL
Sbjct: 913 QVHALVSKS---PHAKDVYIGSALLDMYAKCEWPEE----ARRVFEAMPE-RNIVSWNSL 964
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMD 134
I + + ++++L+ M + G + T +SV++ACA + + E G +
Sbjct: 965 ITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADRE----GRQVHARVV 1020
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
+ R + M N A+V YA CG +AA+ +DRM ++ V+ ++I GY +
Sbjct: 1021 KSDRFREDMVLSN-----ALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSAN 1075
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V +A+ VF ++ E + W + Y QNG + A+ ++ +++E+V + ++A
Sbjct: 1076 VEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNA 1135
Query: 255 CTQLGDVEMAAILAKHV-DEGC-----CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
C + D+++ HV EG + +V N+L+ M+ K G +D + F R+
Sbjct: 1136 CGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 1195
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+D +S+++MI A +G++++AL +F +M P+ VT IGVL+AC H GLVE+G +
Sbjct: 1196 RDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRY 1255
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F MT GI P +H TCM+DLLGR+G L++ LI + DA W +LLG+C++H
Sbjct: 1256 FRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHK 1315
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N E+GE AA L EL P +G LL+N+YA +GKW D V+ + K PGCSWI
Sbjct: 1316 NVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWI 1375
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 187/407 (45%), Gaps = 49/407 (12%)
Query: 81 HAHFRQSIL-LYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRL 139
H H R S++ +YAK + S F + + + + +++ G G + DA+R+
Sbjct: 286 HVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMV-----MSTSIVSGLASCGRIADAKRV 340
Query: 140 FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK---------------------- 177
F+ M ERN++SW+AM+ GY ++ A + +M ++
Sbjct: 341 FEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDI 400
Query: 178 -----------------NSVTWVAMIAGYGKCGEVREAKKV--FDEISEPDASCWAAMTV 218
+ + A++ Y KCG +R A+++ F+ SE D+ W ++
Sbjct: 401 GKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLIS 460
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
Y ++ ++AA+ M+ E V ++ A++AC + ++ + ++ +
Sbjct: 461 GYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEI 519
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
+ + + LI M+ KC D + R F ++DVI ++SMI A GK + LD+F +M+
Sbjct: 520 DDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQ 579
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
+GI+ + VTF+G L +C G V G F LM I P EH CM++LLG+ G +
Sbjct: 580 KQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCM 638
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
+ + W + C+ + N +LGE AA+ + + P
Sbjct: 639 VELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNP 685
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 164/359 (45%), Gaps = 42/359 (11%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR+ FD I + W ++R + L ++ ++ +M GV G+T S +
Sbjct: 202 LADARRAFDDILE-PNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVL 260
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
AC R + LE C + + E +V S++V YA CG M AA+ +
Sbjct: 261 AC-RDNNALEEGRCIHAFV---------LRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLF 310
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ K+ V ++++G CG + +AK+VF+ + E + W AM Y+++ A+
Sbjct: 311 NLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALL 370
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ MRQE + + +SACT + D+ + + + + NAL+ M+S
Sbjct: 371 LFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYS 430
Query: 292 KCGYLDLAWR--EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
KCG L A R F +D S++S+I+ + H S+ AL KM++E + PNQ TF
Sbjct: 431 KCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTF 489
Query: 350 IGVLTACSHGGLVEDG----------------------------CKQFELMTRVFGIKP 380
L AC++ L++ G C+QF+ R+F +P
Sbjct: 490 SSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARP 548
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 129/286 (45%), Gaps = 37/286 (12%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
LL ++ Y ++G + DA+R+FD + N S++A+++ +A
Sbjct: 797 LLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHA------------------- 837
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
+ G +A+ +F I +PD + A+ Q+ A+ M
Sbjct: 838 ------------RLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHA 885
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
++ ++ + A+SAC D + V + + Y+ +AL+ M++KC + +
Sbjct: 886 DDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEE 945
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A R F + ++++S++S+IT + +G EAL +F+ M G P++VT V++AC+
Sbjct: 946 ARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACA- 1004
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKA 401
GL D + ++ RV E + +VD+ + G+ A
Sbjct: 1005 -GLAADR-EGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAA 1048
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 185/444 (41%), Gaps = 90/444 (20%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD +P + W ++I H +++ L++ M+ LG+ T +SVL+ CA
Sbjct: 104 ARELFDLMP-LRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCA 162
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
L CG A++L +A+R+
Sbjct: 163 ECLDL-----CG---------ARQLHGHIAKRDF-------------------------- 182
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+ N + A++ YG C + +A++ FD+I EP+A W + Y G A++M+
Sbjct: 183 -QSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFF 241
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M VR + A+ AC +E + V + +V ++++ M++KCG
Sbjct: 242 RMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCG 301
Query: 295 YLDLAW-------------------------------REFSRIKNKDVISYSSMITAFAD 323
+D A R F +K ++++S+++M+T +
Sbjct: 302 AMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIR 361
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK---- 379
AL +F +MR E E + +T VL+AC+ G+++ G + F IK
Sbjct: 362 SMDLTGALLLFQQMRQETREFDAITLGSVLSACT--GILDIGKGE---EVHAFAIKCGFF 416
Query: 380 --PLTEHLTCMVDLLGRSGQLEKAHSLIM-DYKDFCDAGTWGALLGACKVHVNAELGEIA 436
P+ ++ +V + + G L A L++ + D+ +W +L+ + H + E A
Sbjct: 417 SSPILKN--ALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERH---SMSEAA 471
Query: 437 ARHLLELGPEKTGNSALLANIYAS 460
L ++ E T N + ++ A+
Sbjct: 472 LYALTKMQSEVTPNQSTFSSALAA 495
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 1/220 (0%)
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I CG V +A+++FD + D W A+ + G+ A+ ++ M +R +
Sbjct: 92 IESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKD 151
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
M +S C + D+ A L H+ + + AL+ ++ C L A R F
Sbjct: 152 ATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDD 211
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
I + IS++ ++ + G A+DMF +M + G+ P T + AC +E+G
Sbjct: 212 ILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEG 271
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+ R G + + +VD+ + G ++ A SL
Sbjct: 272 RCIHAFVLR-HGYEHHVHVRSSVVDMYAKCGAMDAAQSLF 310
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 26/187 (13%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
L+R+ G S R + ++ + + W SLI + H+ ++ KM V
Sbjct: 425 LVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVT 483
Query: 101 TSGFTFSSVLNACA--------------------RVPSLLEAVICG-YTKIGLMDDAQRL 139
+ TFSS L ACA + +L +V+ Y K D + R+
Sbjct: 484 PNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRI 543
Query: 140 FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEV 195
F++ R+VI W++M+ G A G + + +D M ++ +SVT++ + G V
Sbjct: 544 FEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHV 603
Query: 196 REAKKVF 202
R + F
Sbjct: 604 RLGRSYF 610
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
++ N I + CG + A F + +D S++++ITA + G EAL +F M +
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 340 EGIEPNQVTFIGVLTACS 357
GI P T VL+ C+
Sbjct: 145 LGIRPKDATMASVLSCCA 162
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 260/476 (54%), Gaps = 22/476 (4%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H+ ++++L + Y A LI L G + A++VF+ + + WT LI
Sbjct: 280 KQLHAKVIRSLPQIDP---YVASALIELYAKCG-SFKEAKRVFNSLQD-RNSVSWTVLIG 334
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ + F +S+ L+ +M + F +++++ C + ++ L
Sbjct: 335 GSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-------------FNRMDLCLGR 381
Query: 137 QR---LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
Q S R ++ +++++ YA CG+++ A+ + M+E++ V+W +MI Y + G
Sbjct: 382 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 441
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAI 252
+ +A++ FD ++ +A W AM Y+Q+G + ++MY M Q++V V V
Sbjct: 442 NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 501
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
C +G ++ + H + V+NA I M+SKCG + A + F + KDV+
Sbjct: 502 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVV 561
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S+++MIT ++ HG ++A F M ++G +P+ ++++ VL+ CSH GLV++G F++M
Sbjct: 562 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 621
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
TRV GI P EH +CMVDLLGR+G L +A LI A WGALL ACK+H N EL
Sbjct: 622 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDEL 681
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+AA+H+ EL +G+ LLA IY+ GK DS V+ ++ + KK+PG SW+
Sbjct: 682 AELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWM 737
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 139/322 (43%), Gaps = 51/322 (15%)
Query: 82 AHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL--EAVICGYTKIGLMDDAQRL 139
A F Q+ LL+A + G L+ +L A + P+++ ++ GY K G + DA+ L
Sbjct: 54 AVFLQNTLLHAYL-SCGALSDA---RRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEEL 109
Query: 140 FDSMAERNVISW---------------------------------------------SAM 154
FD M R+V SW +A+
Sbjct: 110 FDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETAL 169
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
V + CG + A + ++ +M+AGY K + A + F++++E D W
Sbjct: 170 VDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 229
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
M Q+G + A+ + M ++ VR+ +++AC +L + L V
Sbjct: 230 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS 289
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
YV++ALI +++KCG A R F+ +++++ +S++ +I + +++++F
Sbjct: 290 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELF 349
Query: 335 LKMRNEGIEPNQVTFIGVLTAC 356
+MR E + +Q +++ C
Sbjct: 350 NQMRAELMAIDQFALATLISGC 371
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 131/312 (41%), Gaps = 75/312 (24%)
Query: 152 SAMVAGYANCGNMKAAKEFYD-RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
+ ++ Y +CG + A+ + E N +T M+ GY K G + +A+++FD + D
Sbjct: 59 NTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV 118
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM-VGAISACTQLGDVEMAAILAK 269
+ W N +S+ + G+ +C LG E+A L
Sbjct: 119 ASW--------------------------NTLMSDTSRPAGSWMSCGALGCRELAPQLL- 151
Query: 270 HVDEGCCDRTNY-----VSNALIHMHSKCGYLDLAWREFSRIKN---------------- 308
G + ++ V AL+ M +CGY+D A R FS+I+
Sbjct: 152 ----GLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 207
Query: 309 ---------------KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
+DV+S++ MI A + G+ +EAL + ++M +G+ + T+ L
Sbjct: 208 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 267
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQLEKAHSLIMDYKDF 411
TAC+ L G + +L +V P + + +++L + G ++A + +D
Sbjct: 268 TACAR--LFSLGWGK-QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR 324
Query: 412 CDAGTWGALLGA 423
++ +W L+G
Sbjct: 325 -NSVSWTVLIGG 335
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 261/480 (54%), Gaps = 28/480 (5%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLI-RLLQLPGDNLSYARQVFDQIPKCKTQFLWTS 73
Q+KQ+H Y TL DQ + LI +LL++P NL YA +V PK T FL+
Sbjct: 3 QVKQIHGY---TLRNGIDQ----TKILIEKLLEIP--NLHYAHKVLHHSPK-PTLFLYNK 52
Query: 74 LIRNHVLHA-HFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV--PSLLEAVICGYTKI 130
LI+ + H H Q LY++M L + TF+ + +AC + PSL + + + K
Sbjct: 53 LIQAYSSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKS 112
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G E ++ + +A++ Y G ++ A++ +D+M + TW AM+AG+
Sbjct: 113 GF------------EPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHA 160
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ G++ A ++F + + W M Y ++ A+ ++ M QE + +
Sbjct: 161 RFGDMDVALELFRLMPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLA 220
Query: 251 AI-SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN- 308
+I A LG +E+ + + + + YVSNA++ M++KCG +D+AW+ F+ I +
Sbjct: 221 SIFPAFANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSL 280
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+++ S++SMI A HG+ + L ++ +M EG P+ VTF+G+L AC+HGG+VE G
Sbjct: 281 RNLCSWNSMIMGLAVHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHI 340
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F+ MT F I P EH CMVDLLGR+GQL +A+ +I D+ WGALLGAC H
Sbjct: 341 FKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHD 400
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N EL EIAA L L P GN +L+NIYAS G+W ++ ++ ++ KS G S+I
Sbjct: 401 NVELAEIAAESLFALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFI 460
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 260/485 (53%), Gaps = 51/485 (10%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL- 110
L AR +FD+ + WT+L+ + ++ +L+ +M + V++ +
Sbjct: 87 LRDARSLFDRSDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAV 146
Query: 111 -----NACA---RVP-------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
+ACA R+P ++L A++ + G +D A+ LF M ER+V++W+ MV
Sbjct: 147 AGRAGDACALFDRMPVRDAGSWNILLAML---VRSGSVDKARELFGRMPERDVMAWTTMV 203
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK---------------------CG- 193
G A GN+ A+ +D M E+N V+W AMI+GY + C
Sbjct: 204 DGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNI 263
Query: 194 ---------EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+++ A+K+FDE+ E + W M Y++ ++ ++ +++ M +R +
Sbjct: 264 MITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPN 323
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+V +GA+ AC+ L + + + + + +V +AL+++++KCG + LA + F
Sbjct: 324 QVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFD 383
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+ KD+IS++ +I A+A HG EA+ ++ KM+ G PN VT++ +L+ACSH GLV++
Sbjct: 384 LSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDE 443
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT-WGALLGA 423
G K FE M I EH TC++DL R+G+L+ A LI K +G+ W ALLG
Sbjct: 444 GLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGG 503
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C H N +G +AAR+L++ P+ G LL+NIYAS GKWK++ ++ ++ KK P
Sbjct: 504 CNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQP 563
Query: 484 GCSWI 488
GCSWI
Sbjct: 564 GCSWI 568
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 171/374 (45%), Gaps = 30/374 (8%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH-RLGVLTSGFTFSSVLNAC 113
AR++FD P+ + WT+L+ + R + L+ + R V+T
Sbjct: 59 ARKLFDGTPE-RDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVT------------ 105
Query: 114 ARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
A++ GY + GL+D+A+ LF M +RNV+SW+ M+ YA G A +DR
Sbjct: 106 ------WTALLSGYARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDR 159
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M +++ +W ++A + G V +A+++F + E D W M ++G A ++
Sbjct: 160 MPVRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLF 219
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M + NV +S AM+ + +L + H D C N +I +
Sbjct: 220 DSMPERNV-VSWNAMISGYTRNHRLDEALDLFTKMPHRDIASC-------NIMITGFIQN 271
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
L A + F + ++V+++++M+ + +S+ +L +F M GI PNQVTF+G L
Sbjct: 272 KDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGAL 331
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
ACS + +G KQ M + T + ++++ + G++ A L D D
Sbjct: 332 DACSDLATLCEG-KQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLF-DLSREKD 389
Query: 414 AGTWGALLGACKVH 427
+W ++ A H
Sbjct: 390 LISWNGIIAAYAHH 403
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 98/241 (40%), Gaps = 29/241 (12%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
T + KQVH + KT + + L+ + G+ + AR++FD + + K W
Sbjct: 339 TLCEGKQVHQMICKTAFQVDT---FVGSALMNVYAKCGE-VGLARKLFD-LSREKDLISW 393
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
+I + H ++I LY KM G + T+ +L+AC + G
Sbjct: 394 NGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSAC--------------SHSG 439
Query: 132 LMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKEF--YDRMTEKNSVTWVA 184
L+D+ ++F+SM I+ ++ ++ + G + AK Y ++ + W A
Sbjct: 440 LVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSA 499
Query: 185 MIAGYGKCGEVREAKKVFDEI--SEPD-ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
++ G G + +EPD A + ++ Y G K A E+ M +
Sbjct: 500 LLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGL 559
Query: 242 R 242
+
Sbjct: 560 K 560
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 248/487 (50%), Gaps = 69/487 (14%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------- 121
W S+I + +++ ++ + +LG++ + +F + +C+ + L+
Sbjct: 1983 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 2042
Query: 122 ------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA-- 167
A+I Y+K G + DA+ LFD + RNV+SW++M+ GY A
Sbjct: 2043 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALL 2102
Query: 168 --KEFYDRMTEK--------NSVTWVAMIAG----------------------------- 188
K+F + TE +SV V++++
Sbjct: 2103 LFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVG 2162
Query: 189 ------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENV 241
Y KCG+ +KKVFD + E D W +M Y Q+G + A+E++ M R V
Sbjct: 2163 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 2222
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
R + V + + AC G + + V + + V ++I M+ KCG +++A +
Sbjct: 2223 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 2282
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F R+K K+V S+++M+ + HG+++EALD+F KM G++PN +TF+ VL ACSH GL
Sbjct: 2283 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGL 2342
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
VE+G F M + I+P EH CMVDL GR+G L +A++LI K D WG+LL
Sbjct: 2343 VEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 2402
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC++H N +LGEIAA+ L EL P+ G LL+N+YA G+W D E ++M++ + K
Sbjct: 2403 GACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVK 2462
Query: 482 SPGCSWI 488
PG S +
Sbjct: 2463 PPGFSLV 2469
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 231/439 (52%), Gaps = 28/439 (6%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
+L+ K F L+Q+H+ ++++ +DQ + LI L G ++YA +F QI
Sbjct: 32 FLLQNCKNFKHLRQIHAKIIRSGLS-NDQL--LTRKLIHLYSTHG-RIAYAILLFYQIQN 87
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-LEAV 123
T F W +IR + ++ Q+++LY M G+ FTF V+ AC S+ L V
Sbjct: 88 PCT-FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKV 146
Query: 124 ICG-YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
+ G K G D + N+I + Y CG+ + A + +++M +N V+W
Sbjct: 147 VHGSLIKYGFSGDV------FVQNNLIDF------YFKCGHTRFALKVFEKMRVRNVVSW 194
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
+I+G CG+++EA+++FDEI + W AM Y++N + A+E++K M+ EN+
Sbjct: 195 TTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF 254
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+E MV I ACT++G + + + + + C + Y+ ALI M+SKCG + A
Sbjct: 255 PNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEV 314
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + K + +++SMIT+ HG QEAL++F +M ++P+ +TFIGVL AC H V
Sbjct: 315 FETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
++GC F MT+ +GI P+ EH CM +L RS L++A F G+L
Sbjct: 375 KEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA---------FKSTKEVGSLAN 425
Query: 423 ACKVHVNAELGEIAARHLL 441
+ + +A ++A LL
Sbjct: 426 SPSICFDARAKQVAWTQLL 444
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ + + W ++ + G + A+ + +R+ + + + I +C+ L D+
Sbjct: 1975 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 2034
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ + + +VS+ALI M+SKCG L A F I ++V+S++SMIT + +
Sbjct: 2035 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 2094
Query: 325 GKSQEALDMFLKMRNEGIE-------P-NQVTFIGVLTACSH--GGLVEDGCKQF 369
++ AL +F E E P + V + VL+ACS G + +G F
Sbjct: 2095 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF 2149
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 39/189 (20%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A++ FD++ K K WT+++ + +H ++++ ++ KM R GV + TF SVL AC+
Sbjct: 2280 AKKTFDRM-KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 2338
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKAAKE 169
GL+++ F++M E + + MV + G + A
Sbjct: 2339 HA--------------GLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384
Query: 170 FYDRMTEK-NSVTWVAMIAGYGKC--------GEVREAKKVFDEISEPDASCWAAMTVCY 220
RM K + V W +++ G C GE+ A+K+F+ +PD + +
Sbjct: 2385 LIKRMKMKPDFVVWGSLL---GACRIHKNVDLGEI-AAQKLFE--LDPDNCGYYVL---- 2434
Query: 221 VQNGYAKAA 229
+ N YA A
Sbjct: 2435 LSNLYADAG 2443
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
+LA + + +V S++S+I A G S EAL F +R G+ P + +F + +C
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
S + G + VFG + + ++D+ + GQL+ A +L D + +
Sbjct: 2026 SALCDLVSG-RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARAL-FDEIPLRNVVS 2083
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPE-KTGNSALLANI 457
W +++ + A+ + + LE E + GN+ L ++
Sbjct: 2084 WTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 2125
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 239/438 (54%), Gaps = 15/438 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD++ K + W +I +VL+ F +++ LY K+ G + TF S+L AC+
Sbjct: 261 AREVFDKMKK-RDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACS 319
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
V +L + + ++ I +R DS V +A+V YA CG+++ A++ ++ M
Sbjct: 320 SVKALAQGRLV-HSHI-----LERGLDS----EVAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 175 TEKNSVTWVAMIAGYGKCG---EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+++V W +I Y G + R+A+KVFD + D W AM YVQNG A AA++
Sbjct: 370 KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMK 429
Query: 232 MYKVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+++ M ++ V + + AC LG + L + E + V+N LI+M+
Sbjct: 430 IFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMY 489
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
++CG L+ A R F+ K K V+S+++M+ AF+ +G+ EALD+F +M EG++P+ VT+
Sbjct: 490 ARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYT 549
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
+L C+HGG +E G + F M + + P +H MVDLLGRSG+L A L+
Sbjct: 550 SILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPF 609
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D W L AC++H ELGE AA + EL P T ++NIYA+ G W+ V
Sbjct: 610 EPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASV 669
Query: 471 KMMISETEKKKSPGCSWI 488
+ + E KK PG S+I
Sbjct: 670 RKKMEERGLKKLPGLSFI 687
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 210/466 (45%), Gaps = 94/466 (20%)
Query: 50 DNLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
D+L AR VF+ + + + W ++I + + H ++++LY +M+ G+ T TF S
Sbjct: 56 DSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVS 115
Query: 109 VLNACARVP------------------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
VL AC+ + SL A++ Y + G + DA+R+F S+ R+ S
Sbjct: 116 VLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETS 175
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM---TEKNSVTWVAMIAG------------------- 188
W+A++ ++ G+ A + M + NS T++ +I+G
Sbjct: 176 WNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235
Query: 189 ----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
YGKCG EA++VFD++ + D W M CYV NG A+E+
Sbjct: 236 NGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALEL 295
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
Y+ + E + ++ V + AC+ + + ++ H+ E D V+ AL++M++K
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAK 355
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE----------------------- 329
CG L+ A + F+ +KN+D +++S++I A+A +G ++
Sbjct: 356 CGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMI 415
Query: 330 -----------ALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
A+ +F +M G++P+ VTFI VL AC+ G + + K
Sbjct: 416 TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQISESE 474
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
++ ++++ R G LE+A L K+ +W A++ A
Sbjct: 475 LESNVVVTNTLINMYARCGSLEEAERLFAAAKEKT-VVSWTAMVAA 519
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 161/354 (45%), Gaps = 48/354 (13%)
Query: 159 ANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--EPDASC 212
++CG++ + ++R+ E++++ A+I+ YGKC + +A+ VF+ + + +
Sbjct: 18 SSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVS 77
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W AM Y QNG++ A+ +Y M + + V V + AC+ L + V
Sbjct: 78 WNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVF 134
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
D ++NAL+ M+++ G + A R F ++ +D S++++I A + G AL
Sbjct: 135 YSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALR 194
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK-QFELMTRVFGIKPLTEHLTCMVDL 391
+F +M+ + ++PN T+I V++ S ++ +G K E++ F + T ++++
Sbjct: 195 IFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVA--TALINM 251
Query: 392 LGRSGQLEKAHSLIMDYK------------------DFCDA----------------GTW 417
G+ G +A + K DF +A T+
Sbjct: 252 YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATF 311
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPE-KTGNSALLANIYASMGKWKDSEIV 470
++LGAC G + H+LE G + + + L N+YA G +++ V
Sbjct: 312 VSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKV 365
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
V + + +C+ GDV L + + +R V NALI M+ KC L A F
Sbjct: 8 VTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFES 67
Query: 306 I--KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ + ++V+S+++MI A+A +G S EAL ++ +M +G+ + VTF+ VL ACS
Sbjct: 68 MDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS------ 121
Query: 364 DGCKQFELMTRVF--GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ E+ RVF G+ +V + R G + A + + D +W A++
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTR-DETSWNAVI 180
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 259/476 (54%), Gaps = 22/476 (4%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H+ ++++L + Y A LI L G + A++VF+ + + WT LI
Sbjct: 290 KQLHAKVIRSLPQIDP---YVASALIELYAKCG-SFKEAKRVFNSLQD-RNSVSWTVLIG 344
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ + F +S+ L+ +M + F +++++ C + ++ L
Sbjct: 345 GSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-------------FNRMDLCLGR 391
Query: 137 QR---LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
Q S R ++ +++++ YA CG+++ A+ + M+E++ V+W +MI Y + G
Sbjct: 392 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 451
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAI 252
+ +A++ FD + +A W AM Y+Q+G + ++MY M Q++V V V
Sbjct: 452 NIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 511
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
C +G ++ + H + V+NA I M+SKCG + A + F + KDV+
Sbjct: 512 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVV 571
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S+++MIT ++ HG ++A F M ++G +P+ ++++ VL+ CSH GLV++G F++M
Sbjct: 572 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 631
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
TRV GI P EH +CMVDLLGR+G L +A LI A WGALL ACK+H N EL
Sbjct: 632 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDEL 691
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+AA+H+ EL +G+ LLA IY+ GK DS V+ ++ + KK+PG SW+
Sbjct: 692 AELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWM 747
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 177/414 (42%), Gaps = 43/414 (10%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSV 109
+LS A ++FD++P+ + W +L+ + F + + MHR G L + FTF V
Sbjct: 86 SLSDAEELFDRMPR-RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCV 144
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+ +C A+ C L+ + FD + +V +A+V + CG + A
Sbjct: 145 MKSCG-------ALGCRELAPQLLGLFWK-FDFWGDPDV--ETALVDMFVRCGYVDFASR 194
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ ++ +M+AGY K + A + F++++E D W M Q+G + A
Sbjct: 195 LFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREA 254
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ + M ++ VR+ +++AC +L + L V YV++ALI +
Sbjct: 255 LGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG A R F+ +++++ +S++ +I + +++++F +MR E + +Q
Sbjct: 315 YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFAL 374
Query: 350 IGVLTACSH--------------------------GGLVEDGCKQFELMTRVFGIKPLTE 383
+++ C + L+ K +L F ++E
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434
Query: 384 H----LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
T M+ + G + KA D D +A TW A+LGA H E G
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFF-DGMDTRNAITWNAMLGAYIQHGAEEDG 487
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 146/313 (46%), Gaps = 16/313 (5%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDS-MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
L ++ Y G + DA+RL + + E NVI+ + M+ GYA G++ A+E +DRM +
Sbjct: 41 LQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRR 100
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN-----GYAKAAIEM 232
+ +W +++GY + + + F + S A T C V G + A ++
Sbjct: 101 DVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQL 160
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ + + + + G V+ A+ L ++ T + N+++ ++K
Sbjct: 161 LGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIER----PTIFCRNSMLAGYAK 216
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
+D A F + +DV+S++ MI A + G+ +EAL + ++M +G+ + T+
Sbjct: 217 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 276
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQLEKAHSLIMDYKD 410
LTAC+ L G + +L +V P + + +++L + G ++A + +D
Sbjct: 277 LTACAR--LFSLGWGK-QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 333
Query: 411 FCDAGTWGALLGA 423
++ +W L+G
Sbjct: 334 R-NSVSWTVLIGG 345
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 50/200 (25%)
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF-SR 305
A+ A+ +C G + A L + ++ N L+H + CG L A R +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRN--------------------EGIE-- 343
IK +VI+++ M+ +A G +A ++F +M +G+E
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 344 ----------PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI--------KPLTEHL 385
PN TF V+ +C G L GC+ EL ++ G+ P E
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSC--GAL---GCR--ELAPQLLGLFWKFDFWGDPDVE-- 176
Query: 386 TCMVDLLGRSGQLEKAHSLI 405
T +VD+ R G ++ A L
Sbjct: 177 TALVDMFVRCGYVDFASRLF 196
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 246/445 (55%), Gaps = 19/445 (4%)
Query: 51 NLSYARQVFDQIPKC-KTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSS 108
N+ A+++FDQ+ K W S+I + + F +++ ++ + G+ FT S
Sbjct: 223 NVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGS 282
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
VL ACA + SL + G AQ + + N A+V Y+ C ++KAA+
Sbjct: 283 VLAACADMASL---------RRGKEVHAQAVVRGL-HWNTFVGGALVEMYSKCEDLKAAQ 332
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASCWAAMTVCYVQNG 224
+D +TE+++ TW +I+GY C ++ + + ++ EP+ W + +V+NG
Sbjct: 333 LAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENG 392
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAI-SACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
+ + A+ ++ M+ ++R ++ VG I AC +L + + H + ++
Sbjct: 393 HNELALRLFTEMQTSSLR-PDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIG 451
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
AL+ M++KCG + A + ++RI N +++S ++M+TA+A HG E + +F M G
Sbjct: 452 AALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFR 511
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
P+ VTF+ VL++C H G VE G + F+LMT + + P +H TC+VDLL R+G+L++A+
Sbjct: 512 PDHVTFLSVLSSCVHAGAVETGHEFFDLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYE 570
Query: 404 LIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGK 463
L+ D+ WGALLG C + N ELGEIAA L+EL P TGN LLAN+YA G+
Sbjct: 571 LVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGR 630
Query: 464 WKDSEIVKMMISETEKKKSPGCSWI 488
W D + + MI + KSPGCSWI
Sbjct: 631 WHDLDRTRQMIKDRGMHKSPGCSWI 655
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 183/386 (47%), Gaps = 59/386 (15%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN--LSYARQVF 59
T L+ +T N KQVH++ LKT +H + +LLQ+ G L A VF
Sbjct: 64 TYASLLESCRTLNLGKQVHAHTLKT------GFHGHEFVETKLLQMYGRFGCLDDANLVF 117
Query: 60 DQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVP 117
++P+ + + WT+++ HV H +F +++ L+ K+ + F F VL C RV
Sbjct: 118 VKMPQ-RNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVL 176
Query: 118 SL---LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
L L V+ + M A ++F + +NV+S++ M+ GY GN++ AKE +D+M
Sbjct: 177 ELGRQLHGVVI--KRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQM 234
Query: 175 --TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
K++++W +MI+GY +FDE A+ M
Sbjct: 235 ELVGKDTISWNSMISGYAD-------NLLFDE------------------------ALSM 263
Query: 233 YK-VMRQENVRISEVAMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMH 290
++ ++ +E + + ++AC + + + A+ V G T +V AL+ M+
Sbjct: 264 FRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNT-FVGGALVEMY 322
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
SKC L A F + +D +++ +I+ +A + + ++ KM+ +G EPN T+
Sbjct: 323 SKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWN 382
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVF 376
G+++ G VE+G EL R+F
Sbjct: 383 GIIS-----GHVENG--HNELALRLF 401
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+V L+ M+ + G LD A F ++ +++ S++++++ DHG +EAL +F K++ +
Sbjct: 95 FVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLD 154
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
I F VL C GGL + EL ++ G+
Sbjct: 155 DIGLEFFVFPVVLKLC--GGL-----RVLELGRQLHGV 185
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 267/511 (52%), Gaps = 36/511 (7%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ S T QL Q+H+ + L Q + L +L YA +F +C
Sbjct: 46 LIHASNTLPQLHQIHAQIF--LHNLFSNSRVVTQLISSSCSL--KSLDYALSIF----RC 97
Query: 66 ---KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL--- 119
F++ +LIR ++ F S+ + M RL + T VL + A + +
Sbjct: 98 FDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLG 157
Query: 120 -----------LE-------AVICGYTKIGLMDDAQRLFDSMAERN----VISWSAMVAG 157
LE +++ Y KIG + +LFD +RN ++ W+ ++ G
Sbjct: 158 RCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLING 217
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
G++ A ++ M E+N+ +W ++I G+ + G++ A+++F ++ E + W M
Sbjct: 218 CCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMI 277
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
+ QNG + A+ M+ M +E VR +++ +V A+ ACT++G +++ + ++
Sbjct: 278 NGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQ 337
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
+ AL+ M++KCG + A R F K KD++++S MI +A HG +AL F+KM
Sbjct: 338 LNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKM 397
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
++ GI P++V F+ +LTACSH G V+ G FE M + I+P +H T +VDLLGR+G+
Sbjct: 398 KSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGR 457
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
L++A S I D WGAL AC+ H N E+ E+ A LL+L P+ G+ L+N+
Sbjct: 458 LDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNV 517
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
YA++G+W+D E V+ ++ +K PG S+I
Sbjct: 518 YAAVGRWEDVERVRTLMKNRGVEKDPGWSYI 548
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 260/531 (48%), Gaps = 96/531 (18%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L YA VF I + Q W ++IR H L + ++ LY M LG+ + +TF +
Sbjct: 28 LPYAISVFKSIQE-PNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFK 86
Query: 112 ACARVPSLLE-------------------------------------------------- 121
+CA+ + E
Sbjct: 87 SCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVS 146
Query: 122 --AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----- 174
A+I GY G MD AQ++FD + ++V+SW+AM++GYA G K A E ++ M
Sbjct: 147 YTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDV 206
Query: 175 --------------TEKNSV-------TWV-------------AMIAGYGKCGEVREAKK 200
T +V +W+ A+I Y KCGE+ A
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHG 266
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
+F+ + D W + Y + K A+ +++ M + ++V M+ + AC LG
Sbjct: 267 LFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGA 326
Query: 261 VEMAAILAKHVDE---GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
+++ + ++D+ G T+ + +LI M++KCG ++ A + F I NK + S ++M
Sbjct: 327 IDIGRWIHVYIDKKLKGIITNTS-LQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAM 385
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I FA HG++ A D+ +M+ +GIEP+ +TF+G+L+ACSH GL + G K F+ MT +
Sbjct: 386 IFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYR 445
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I+P EH CM+DLLGRSG ++A LI D WG+LL ACK+H N ELGE+ A
Sbjct: 446 IEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIA 505
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ L+++ P+ G+ LL+NIYA+ +W D V+ ++++ KK PGCS I
Sbjct: 506 QKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSI 556
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 50/268 (18%)
Query: 49 GDNLSYARQVFDQIPKC---------------KTQFLWTSLIRNHVLHAHFRQSILLYAK 93
G NL + D KC K W +LI + H ++++L++ +
Sbjct: 242 GSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQE 301
Query: 94 MHRLGVLTSGFTFSSVLNACARV-----------------------PSLLEAVICGYTKI 130
M +LG + T S+L ACA + SL ++I Y K
Sbjct: 302 MLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKC 361
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMI 186
G ++ A ++FD++ +++ S +AM+ G+A G AA + RM E + +T+V ++
Sbjct: 362 GNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLL 421
Query: 187 AGYGKCGEVREAKKVFDEIS-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
+ G +K+F ++ EP + M ++G K A E+ M E
Sbjct: 422 SACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEP- 480
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAK 269
V + AC ++E+ ++A+
Sbjct: 481 --DGVIWGSLLKACKIHKNLELGELIAQ 506
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 197/338 (58%), Gaps = 1/338 (0%)
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
++++ Y CG++ AA++ +D M K+ + W +++ Y + ++ A++VF + D
Sbjct: 185 NSLIGAYIACGDVGAARKVFDEMVVKDVICWTSIVVAYSRSRDMGSAEEVFGQCPVKDMV 244
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W AM Y QN A+E++ M + I EV++ GAISAC QLG V+ AA + +
Sbjct: 245 AWTAMVTGYAQNAMPMKALEVFDRMTALGIGIDEVSLTGAISACAQLGAVKRAAWVQEIA 304
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+ V + L+ M++KCG +D A + F ++ K+V +YSSM+ A HG+++EA+
Sbjct: 305 EMNGFGMNVVVGSGLVDMYAKCGLIDEACKVFDGMQEKNVYTYSSMVVGLASHGRAREAI 364
Query: 332 DMFLKM-RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
+F M R + PN VTFIGVLTACSH G+V DG F M +GI P +H TCMVD
Sbjct: 365 ALFKDMVRRADVAPNHVTFIGVLTACSHAGMVTDGRYYFAQMKDKYGILPSADHYTCMVD 424
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGN 450
LLGR+G +++A L+ G WGALLGAC++H E+ ++AA HL +L PE GN
Sbjct: 425 LLGRAGLVDEALDLVRSMTVEPHGGVWGALLGACRIHGKTEVAKVAAEHLFKLEPEGIGN 484
Query: 451 SALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+N A+ GKW + V+ ++ KK P SW
Sbjct: 485 YVLLSNTLAAAGKWDEVSKVRKVMRSRRLKKVPAVSWF 522
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 251/529 (47%), Gaps = 94/529 (17%)
Query: 54 YARQVFDQIPKC-------KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
+AR VF + C K FLW +I++H R+++L + M G+ F+F
Sbjct: 66 FARYVFREYHVCSFAPGDVKDPFLWNLVIKSHSHGVDPRRALLWFCLMLENGISVDKFSF 125
Query: 107 SSVLNACARVPSL----------------------------------------------- 119
S VL AC+R+ L
Sbjct: 126 SLVLKACSRLGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQ 185
Query: 120 -----LEAVICGYTKIGLMDDAQRLFD--------------------------------- 141
++I GY K GL++ A+ LFD
Sbjct: 186 RDSVSYNSMIDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSDGVNIASKLF 245
Query: 142 -SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKK 200
M E+++ISW++++ GY G M+ AK+ + M ++ VTW MI GY K G V +AK
Sbjct: 246 AEMPEKDLISWNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKT 305
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISACTQLG 259
+FD++ D + +M YVQN + A+E++ M +E ++ E +V +SA QLG
Sbjct: 306 LFDQMPHRDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLG 365
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+ A + ++ E + ALI M+SKCG + A F I+NK + +++MI
Sbjct: 366 QLSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENKSIDHWNAMIG 425
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK 379
A HG + A ++ L++ IEP+ +TF+GVL ACSH GLV++G FELM R I+
Sbjct: 426 GLAIHGLGESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 485
Query: 380 PLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
P +H CMVDLL R G +E A +LI + + W L AC H E+GE+ A+H
Sbjct: 486 PRLQHYGCMVDLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTACNHHKEFEIGELVAKH 545
Query: 440 LLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+ + LL+N+YAS G+WKD V+ M+ E + +K PGCSWI
Sbjct: 546 LILQAGYNPSSYVLLSNMYASFGRWKDVRNVRTMMKERKLQKVPGCSWI 594
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 261/536 (48%), Gaps = 61/536 (11%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
+ + + Q+H+ +LK Q + A LI L +L+ A VF+ +P
Sbjct: 30 KCSNLDSVNQIHAQVLKANLH---QDLFVAPKLIAAFSL-CRHLASAVNVFNHVPHPNVH 85
Query: 69 FLWTSLIRNHVLH-AHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR------------ 115
L+ S+IR H + +H + +M + G+ FT+ +L AC
Sbjct: 86 -LYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHA 144
Query: 116 ------------VPSLL------------------------------EAVICGYTKIGLM 133
VP+ L ++I G + G +
Sbjct: 145 HVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGEL 204
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
+ A +LFD M ER+++SW+ M+ GYA G M A E ++RM ++N V+W M+ GY K G
Sbjct: 205 EGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGG 264
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
++ A+ +FD + W + Y + G+ + A E+Y M + +R + ++ ++
Sbjct: 265 DMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILA 324
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS-RIKNKDVI 312
AC + G + + + + V NA I M++KCG LD A+ FS + KDV+
Sbjct: 325 ACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVV 384
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++SMI FA HG ++AL++F +M EG EP+ TF+G+L AC+H GLV +G K F M
Sbjct: 385 SWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSM 444
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+V+GI P EH CM+DLLGR G L++A +L+ +A G LL AC++H + +
Sbjct: 445 EKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDF 504
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L ++ P GN +LL+NIYA G W + V++ + T +K G S I
Sbjct: 505 ARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSI 560
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 248/487 (50%), Gaps = 69/487 (14%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------- 121
W S+I + +++ ++ + +LG++ + +F + +C+ + L+
Sbjct: 1110 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 1169
Query: 122 ------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA-- 167
A+I Y+K G + DA+ LFD + RNV+SW++M+ GY A
Sbjct: 1170 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALL 1229
Query: 168 --KEFYDRMTEK--------NSVTWVAMIAG----------------------------- 188
K+F + TE +SV V++++
Sbjct: 1230 LFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVG 1289
Query: 189 ------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENV 241
Y KCG+ +KKVFD + E D W +M Y Q+G + A+E++ M R V
Sbjct: 1290 NTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGV 1349
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
R + V + + AC G + + V + + V ++I M+ KCG +++A +
Sbjct: 1350 RYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKK 1409
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F R+K K+V S+++M+ + HG+++EALD+F KM G++PN +TF+ VL ACSH GL
Sbjct: 1410 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGL 1469
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
VE+G F M + I+P EH CMVDL GR+G L +A++LI K D WG+LL
Sbjct: 1470 VEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC++H N +LGEIAA+ L EL P+ G LL+N+YA G+W D E ++M++ + K
Sbjct: 1530 GACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVK 1589
Query: 482 SPGCSWI 488
PG S +
Sbjct: 1590 PPGFSLV 1596
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/399 (33%), Positives = 218/399 (54%), Gaps = 19/399 (4%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
+L+ K F L+Q+H+ ++++ +DQ + LI L G ++YA +F QI
Sbjct: 32 FLLQNCKNFKHLRQIHAKIIRSGLS-NDQL--LTRKLIHLYSTHG-RIAYAILLFYQIQN 87
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-LEAV 123
T F W +IR + ++ Q+++LY M G+ FTF V+ AC S+ L V
Sbjct: 88 PCT-FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKV 146
Query: 124 ICG-YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
+ G K G D + N+I + Y CG+ + A + +++M +N V+W
Sbjct: 147 VHGSLIKYGFSGDV------FVQNNLIDF------YFKCGHTRFALKVFEKMRVRNVVSW 194
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
+I+G CG+++EA+++FDEI + W AM Y++N + A+E++K M+ EN+
Sbjct: 195 TTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF 254
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+E MV I ACT++G + + + + + C + Y+ ALI M+SKCG + A
Sbjct: 255 PNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEV 314
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + K + +++SMIT+ HG QEAL++F +M ++P+ +TFIGVL AC H V
Sbjct: 315 FETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
++GC F MT+ +GI P+ EH CM +L RS L++A
Sbjct: 375 KEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ + + W ++ + G + A+ + +R+ + + + I +C+ L D+
Sbjct: 1102 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 1161
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ + + +VS+ALI M+SKCG L A F I ++V+S++SMIT + +
Sbjct: 1162 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 1221
Query: 325 GKSQEALDMFLKMRNEGIE-------P-NQVTFIGVLTACSH--GGLVEDGCKQF 369
++ AL +F E E P + V + VL+ACS G + +G F
Sbjct: 1222 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF 1276
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A++ FD++ K K WT+++ + +H ++++ ++ KM R GV + TF SVL AC+
Sbjct: 1407 AKKTFDRM-KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 1465
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKAAKE 169
GL+++ F++M E + + MV + G + A
Sbjct: 1466 HA--------------GLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 1511
Query: 170 FYDRMTEK-NSVTWVAMIAGYGKC--------GEVREAKKVFDEISEPD 209
RM K + V W +++ G C GE+ A+K+F+ +PD
Sbjct: 1512 LIKRMKMKPDFVVWGSLL---GACRIHKNVDLGEI-AAQKLFE--LDPD 1554
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
+LA + + +V S++S+I A G S EAL F +R G+ P + +F + +C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
S + G + VFG + + ++D+ + GQL+ A +L D + +
Sbjct: 1153 SALCDLVSG-RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARAL-FDEIPLRNVVS 1210
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPE-KTGNSALLANI 457
W +++ + A+ + + LE E + GN+ L ++
Sbjct: 1211 WTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 1252
>gi|297738569|emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 235/497 (47%), Gaps = 103/497 (20%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ YAR++FDQ+PK + FLW +LIR + +++ LY+ MH G+ +TF V+
Sbjct: 78 MDYARKMFDQMPK-RDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVR 136
Query: 112 ACARVPSLLEA--VICGYTKIGLMDDA-------------------QRLFDSMAERNVIS 150
+CA + +L E V C K G D + +F M RN++S
Sbjct: 137 SCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVS 196
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV----------------------- 183
W+A++AGY K + M T+ N+VT V
Sbjct: 197 WTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGI 256
Query: 184 ------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
A+IA YGKCG V A+ +FD + + W AM Y QN A++
Sbjct: 257 KLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVK 316
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M+ E V + MV ISA LA+ V
Sbjct: 317 LFRRMQAEKVDFDYITMVSVISA-----------YLAREV-------------------- 345
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
F R+ + V+S++SMI A A HG ++AL +F +M++EG++PN TF
Sbjct: 346 -----------FERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAA 394
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
V TAC H GLVE+G K FE M R + I P EH CMVDLLGR+G L +A+ I
Sbjct: 395 VFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVE 454
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D WGALLG+C++H N EL E+ A L L P+ L++NIYA G+W+D+ ++
Sbjct: 455 PDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLR 514
Query: 472 MMISETEKKKSPGCSWI 488
++ E E KK PG S +
Sbjct: 515 KLMEERELKKIPGHSLV 531
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 252/489 (51%), Gaps = 39/489 (7%)
Query: 39 QFLIRLLQLPG----------DNLSYARQVFDQ-IPK-CKTQFLWTSLIRNHVLHAHFRQ 86
Q L+R L LP + +AR VFD +P C+ +LWT+ I + HA
Sbjct: 12 QLLVRGLPLPARAAVSLIASSHSPGHARAVFDNAVPTACENVYLWTATIAAYARHASSSP 71
Query: 87 SI-----LLYAKMHRLGV-LTSGFTFSSVLNACA---------------------RVPSL 119
S+ L+ M R GV + FT SSV+ C+ R +
Sbjct: 72 SVAEGALTLFRLMLRHGVPRPNAFTASSVVRCCSALRAVRVGIQVHGFLVNAGLGRAEHV 131
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
A++ Y G + DA+R+FD M+ +V+ + MVA Y G++++ + +DRM E++
Sbjct: 132 RAALVDMYGNHGRVADARRVFDEMSATSVVLGNTMVACYVRAGDVESGRVVFDRMVERDL 191
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
++W ++ GY + G A+++F+E+ + + + W Y Q A+ ++ MR
Sbjct: 192 ISWNTLMMGYLRQGGAGVARELFEEMPDRNVNSWNMAIAAYSQERSWADAVAVFNRMRLA 251
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ M +SAC QLG + +A + + +GC + +V N+LI M++KCG + A
Sbjct: 252 RFQPDPATMAVLMSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQA 311
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F KD +SY+ MI A A HG ++AL +F +M E ++P+ VT +GVL+AC+H
Sbjct: 312 HLLFVETHLKDTVSYNVMICALARHGHGRDALQVFDEMSKERLQPDAVTLLGVLSACAHA 371
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV DG FE M + I+ +H CMVDL GR+G +++A+ L AG WGA
Sbjct: 372 GLVHDGKFYFESMKTNYAIEQSPDHYACMVDLYGRAGLIKEAYELARAMPMEPHAGVWGA 431
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
L+ AC+ H N E+G++AAR L+ + P G LLAN A +W+ E V +
Sbjct: 432 LINACRKHCNVEVGKVAARELIAIEPRNPGTYVLLANTLARGQQWEFVETVWQSMRGKGI 491
Query: 480 KKSPGCSWI 488
+K+ GCSW+
Sbjct: 492 EKTAGCSWL 500
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 223/371 (60%), Gaps = 9/371 (2%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
+I G + G +DDA LFD+M ERNV+SW+AM++GYA ++ A + + +M ++ +W
Sbjct: 203 MISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASW 262
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
MI G+ + +++ A+++FDE+ + + W M Y+Q ++ A++++ M + ++
Sbjct: 263 NIMITGFIQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQ 322
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN----YVSNALIHMHSKCGYLDL 298
++V +G++ AC+ L A + V + C + +V + L+++++KCG + L
Sbjct: 323 PNQVTFLGSLDACSNLA----ALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRL 378
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A F KD+IS++ +I A+A HG EA+ ++ M+ G +PN T++G+L+ACSH
Sbjct: 379 ARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSH 438
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT-W 417
GLV++G K FE M + I EH TC+VDL R+G+LE A LI +K + T W
Sbjct: 439 AGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVW 498
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
ALLG C H N +G++AA+HLLE P+ G LL NIYAS GKWK++ ++ ++
Sbjct: 499 SALLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVR 558
Query: 478 EKKKSPGCSWI 488
KK PGCSWI
Sbjct: 559 GLKKQPGCSWI 569
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 113/208 (54%), Gaps = 9/208 (4%)
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM-TEKNSVTWVAMIAGY 189
G + DA+RLFD M +R+V+SW+AMVA YA G ++ A+ +DR +N VTW A+++GY
Sbjct: 55 GRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGY 114
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
+ V EA+ +F+ ++E + W M Y G + A ++ M + + +
Sbjct: 115 ARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLC 174
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
G + + G +E A+ + E R +I ++ G +D AW F + +
Sbjct: 175 GLVRS----GSLER----ARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPER 226
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKM 337
+V+S+++MI+ +A + + +EALD+F KM
Sbjct: 227 NVVSWNAMISGYARNHRIEEALDLFTKM 254
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 159/362 (43%), Gaps = 33/362 (9%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L ARQ+FD++PK + WT+++ ++ ++ L+ M G+ + TF L
Sbjct: 274 DLKSARQLFDEMPK-RNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSL 332
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+AC+ + +L E G ++ FD+ E S ++ YA CG ++ A+
Sbjct: 333 DACSNLAALCE----GQQVHQMICKTPSQFDTFVE------STLMNLYAKCGEIRLARNV 382
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE----PDASCWAAMTVCYVQNGYA 226
+D EK+ ++W +IA Y G EA ++ + E P+ + + + G
Sbjct: 383 FDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLV 442
Query: 227 KAAIEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
+++++ M ++N + + + + C++ G +E A L T V +A
Sbjct: 443 DEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSST--VWSA 500
Query: 286 LI---HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
L+ + H DLA + + + +Y+ + +A GK +EA ++ +M G+
Sbjct: 501 LLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGL 560
Query: 343 E----------PNQV-TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
+ N+V F+ + S L+ D + + R+ G P +H+ V+L
Sbjct: 561 KKQPGCSWIEVANKVHVFVSRDKSHSESDLINDLLQDIHRIMRMAGTVP-RDHMLIDVEL 619
Query: 392 LG 393
+G
Sbjct: 620 VG 621
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS--- 211
VA A G + A+ +D M +++ V+W AM+A Y + G ++EA+ +FD PDA
Sbjct: 48 VAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFD---RPDARRNV 104
Query: 212 -CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W A+ Y + A +++ M + NV V+ + A T +G VE A+ L
Sbjct: 105 VTWTALLSGYARARRVDEAEALFEGMAERNV----VSWNTMLEAYTAVGRVEDASALFNR 160
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ N + L+ + G L+ A + F R+ +DV+S+++MI+ A +G +A
Sbjct: 161 MPVRDAGSWNILLCGLV----RSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDA 216
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+F M E N V++ +++ + +E+ F M
Sbjct: 217 WVLFDAMP----ERNVVSWNAMISGYARNHRIEEALDLFTKM 254
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
SN + + G + A R F + ++DV+S+++M+ A+A G QEA +F +
Sbjct: 44 SNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR---PDA 100
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTR--VFGIKPLTEHLTCMVDLLGRSGQLEK 400
N VT+ +L+ + V++ FE M V + E T + G++E
Sbjct: 101 RRNVVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAV-------GRVED 153
Query: 401 AHSLIMDYKDFCDAGTWGALL 421
A +L + DAG+W LL
Sbjct: 154 ASALF-NRMPVRDAGSWNILL 173
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 267/480 (55%), Gaps = 22/480 (4%)
Query: 15 QLKQVHSYLLK-TLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTS 73
+LK++H++++K +L+ + ++ + G+ YA +F ++ FL+ +
Sbjct: 3 ELKKIHAHVVKFSLSXSS----FLVTKMVDMCNHHGET-EYANLLFKRVAD-PNAFLYNA 56
Query: 74 LIRNHVLHAHFRQSILLYAKM--HRLG---VLTSGFTFSSVLNACARVPSLLEAVICGYT 128
+IR + + + +I ++ +M H G FTF V+ CA ++C
Sbjct: 57 MIRAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCA-------GLMCYNL 109
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
+ A F + N + +++V Y C ++ A ++ MTE+++V+W +I+G
Sbjct: 110 GKQVHGHA---FKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISG 166
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
+ + G++R A+ +F+E+ + W A+ Y + G A+E ++ M+ ++ + E+++
Sbjct: 167 HVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISL 226
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V + AC QLG +E+ + + D+ R V NALI +++K G +D R F ++
Sbjct: 227 VSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNE 286
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+DVIS+S+MI A+HG+++EA+++F +M+ +EPN +TF+G+L+AC+H GL+ +G
Sbjct: 287 RDVISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGY 346
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
FE M R I+P EH C+V+LLG SG+L++A LI D+ WG L +C+ H
Sbjct: 347 FESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHG 406
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N E+ IA HLLEL P+ TGN L+N+YA +GKW ++ ++S K+PGCS I
Sbjct: 407 NLEIVAIAMEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSI 466
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 237/435 (54%), Gaps = 13/435 (2%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD +P+ + W ++ ++ ++R+++LL KM R V+ ++VL+ C
Sbjct: 47 ARRVFDGMPE-RDLVAWGVMLDSYFNTQNYRETLLLLNKMKRSRVVPDQVILATVLSTCG 105
Query: 115 RVPSLLEA-VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
L I Y ++ + RL SA++ YA+C +M+ A + Y
Sbjct: 106 HTRHLRSGKTIHSYIQVSDIFVDARLS-----------SALINMYASCMDMEMADKIYSG 154
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M K+ V+ AM+ GY K G++ A+ +F+ ++E D W+AM Y +N + ++
Sbjct: 155 MQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLF 214
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M+ V E+ M+ ISAC +G ++ A + V + + NALI M SKC
Sbjct: 215 NKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKC 274
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L LA F+ + K+VI+++SMI AFA HG AL +F +M+ EG+EPN VTF+ +L
Sbjct: 275 GSLTLALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLL 334
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC H GLV +G FE M + + I+P EH CMVDL+GR+ +++A LI +
Sbjct: 335 YACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPN 394
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WG+LL AC +H + ELGE AA+ +LEL P G LL+NI+A G W +++ +++M
Sbjct: 395 VAIWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLRVM 454
Query: 474 ISETEKKKSPGCSWI 488
+ K G SW+
Sbjct: 455 MKVHGVSKETGYSWL 469
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 176 EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKV 235
+++ A++ Y C V EA++VFD + E D W M Y + + +
Sbjct: 25 DEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLNK 84
Query: 236 MRQENVRISEVAMVGAISAC---------------TQLGDVEMAAILAK---HVDEGCCD 277
M++ V +V + +S C Q+ D+ + A L+ ++ C D
Sbjct: 85 MKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMD 144
Query: 278 ------------RTNYVSN-ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
R + VS+ A++ ++K G +++A F+ + KDV+S+S+MI+A+A++
Sbjct: 145 MEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAEN 204
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
+ E L++F KM+ G+ P+++T + V++AC++ G + D + + G +
Sbjct: 205 NQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSL-DKARWIHSIVGNHGFYKILSI 263
Query: 385 LTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVH 427
++D+ + G L A ++ M K+ TW +++ A +H
Sbjct: 264 CNALIDMFSKCGSLTLALNMFNAMPRKNVI---TWTSMIAAFAMH 305
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 256/457 (56%), Gaps = 30/457 (6%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L YA+++FDQIP+ +F++ SLIR + ++LL+ +M G+ + FT VL
Sbjct: 37 DLQYAQRMFDQIPQ-PNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 95
Query: 111 NACARVPSLLEAV---------------------ICGYTKIGLMDDAQRLFDSMAER--- 146
AC + EAV I Y GL+ A++LFD + ++
Sbjct: 96 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLI 155
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
++I +A+V YA CGN+ +A+ +DR EKN V+W +MI+ Y + G + A+++FD++
Sbjct: 156 DIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMP 215
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
+ W +M CY++ G + A++++ MR V E +V ++AC+QLGD+ M
Sbjct: 216 GKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKK 275
Query: 267 LAKHV--DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ ++ ++G T Y N+LI M++KCG + A F + K+++S++ +I A A H
Sbjct: 276 IHNYILSNKGAYGVTLY--NSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALH 333
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
G EA+ +F +M+ +G P+++T G+L+ACSH GLV+ G F+ M ++ + EH
Sbjct: 334 GCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEH 393
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
CMVDLLGR G L +A LI D WGALLGAC++H N E+G+ + LLEL
Sbjct: 394 YACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELE 453
Query: 445 PEKTGNSALLANIYASMGKWKD-SEIVKMMISETEKK 480
P G L++NIY +W+D +I K+MI KK
Sbjct: 454 PHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKK 490
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 248/463 (53%), Gaps = 24/463 (5%)
Query: 32 DQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILL 90
D + + +I LL GD L AR++FD+ C + W S+I +V +++
Sbjct: 139 DSDIFVSNAVIHLLVSCGD-LDGARKMFDK--SCVRDLVSWNSMINGYVRRGWAYEALNF 195
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
Y +M G+ T V+++CA++ L D R E N +
Sbjct: 196 YREMKVEGIKPDEVTMIGVVSSCAQLEDL---------------DLGRESHCYIEENGLK 240
Query: 151 WSAMVAG-----YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+ +A Y CGN+++A++ +D MT K V+W M+ GY + G + A K+FDE+
Sbjct: 241 LTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEM 300
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
+ D W AM YV K A+ ++ M+ N+ EV MV +SAC+QLG +++
Sbjct: 301 PDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGI 360
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
+ ++++ + ALI M++KCG + A + F + ++ ++++++I+ A HG
Sbjct: 361 WIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHG 420
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+ A+ F +M + + P++VTF+G+L+AC HGGLVE+G K F M+ F + P +H
Sbjct: 421 NAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHY 480
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
+CMVDLLGR+G LE+A LI DA WGAL AC++H N +GE AA LL++ P
Sbjct: 481 SCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDP 540
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+G LLAN+Y WK++ + ++ + +K+PGCS I
Sbjct: 541 HDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSI 583
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 101/199 (50%), Gaps = 2/199 (1%)
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYK-VMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
P+ W ++ + + A+ +YK V++ + + AC +L + M +
Sbjct: 69 PNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSE 128
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ HV D +VSNA+IH+ CG LD A + F + +D++S++SMI + G
Sbjct: 129 ILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW 188
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+ EAL+ + +M+ EGI+P++VT IGV+++C+ ++ G ++ G+K
Sbjct: 189 AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLG-RESHCYIEENGLKLTVPLAN 247
Query: 387 CMVDLLGRSGQLEKAHSLI 405
++D+ + G LE A L
Sbjct: 248 ALMDMYMKCGNLESARKLF 266
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 270/535 (50%), Gaps = 68/535 (12%)
Query: 14 NQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTS 73
N +KQ+H+ L+K Q Y A LI L +NLS A VF+Q+P L+
Sbjct: 36 NHIKQIHAQLIKCHLH---QDPYIAPKLIASYSLT-NNLSSAVNVFNQVPDPNVH-LYNY 90
Query: 74 LIRNHVLHAHFRQSILLYA---KMHRLGVLTSGFTFSSVLNACARVPSLLEAV------- 123
LIR + L + S+ + KMH GVL FT+ +L C S L V
Sbjct: 91 LIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHV 150
Query: 124 ---------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
I Y + G ++ A ++F M ER+V+SW++MV G G++ A
Sbjct: 151 EKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGAL 210
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG---- 224
+ +D M E++ V+W M+ G+ K GE+ +A K+F+ ++E D W+ M Y +NG
Sbjct: 211 KVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDM 270
Query: 225 ----------------------YA-----KAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
YA K A+ + M + +R+ + + ++AC +
Sbjct: 271 ARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAE 330
Query: 258 LGDVEMAAILAKHVDEGCCDR---TNYVSNALIHMHSKCGYLDLAWREFSRIKN-KDVIS 313
G M + K D R + V N+ I M++KCG +D A+R F+ +K KD++S
Sbjct: 331 SG---MLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVS 387
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++SMI F HG ++++++F M EG +P++ TFIG+L AC+H GLV +G F M
Sbjct: 388 WNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQ 447
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
RV+GI P EH CMVDLLGR G L++A L+ +A G LLGAC++H + +L
Sbjct: 448 RVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLA 507
Query: 434 EIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+++L +L P GN +LL+NIYA G W + V+ +++ +K G S I
Sbjct: 508 TSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSI 562
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 247/456 (54%), Gaps = 25/456 (5%)
Query: 40 FLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV 99
L RLL +P NL YAR++FD T FL+ LI+ + +H +SI+LY + G+
Sbjct: 15 LLQRLLLIP--NLVYARKLFDHHQNSCT-FLYNKLIQAYYVHHQPHESIVLYNLLSFDGL 71
Query: 100 LTSGFTFSSVLNACA-----RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
S TF+ + A A R LL + + F S E + + +
Sbjct: 72 RPSHHTFNFIFAASASFSSARPLRLLHS---------------QFFRSGFESDSFCCTTL 116
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+ YA G + A+ +D M++++ W AMI GY + G+++ A ++FD + + + W
Sbjct: 117 ITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWT 176
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+ + QNG A++M+ M ++ +V+ + + +V + AC LG++E+ L + E
Sbjct: 177 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 236
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN-KDVISYSSMITAFADHGKSQEALD 332
YV NA I M+SKCG +D+A R F + N +++ S++SMI + A HGK EAL
Sbjct: 237 NGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALT 296
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F +M EG +P+ VTF+G+L AC HGG+V G + F+ M V I P EH CM+DLL
Sbjct: 297 LFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLL 356
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR G+L++A+ LI DA WG LLGAC H N E+ EIA+ L +L P GN
Sbjct: 357 GRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCV 416
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+++NIYA+ KW ++ ++ + K+ G S+
Sbjct: 417 IMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYF 452
>gi|125602089|gb|EAZ41414.1| hypothetical protein OsJ_25936 [Oryza sativa Japonica Group]
Length = 1165
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 250/447 (55%), Gaps = 29/447 (6%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++S AR+VFD +P+ + WTS+IR +V R +LL+ M R GV + T S L
Sbjct: 210 SVSEARRVFDAMPE-RNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVAL 268
Query: 111 NACA---------RVPSLL------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA ++ +L+ +++I Y++ G M DA+R FD M +++++
Sbjct: 269 DACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIV 328
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
SW++++ GY ++ A + M +K++V+W +M+ G+ G +RE+ ++F+++ D
Sbjct: 329 SWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKD 388
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILA 268
W A+ ++ NG +A+ + M QE + + +A +SA L + A
Sbjct: 389 EVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHA 448
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
++ G + V +L+ M++KCG L A+ FS I N +I+ +SMITAF HG +
Sbjct: 449 YSINMGWV-FDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVE 507
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
+AL +F KM+N G +PN VTF+G+LT C+ G V+ G FE M V+G++P EH TCM
Sbjct: 508 DALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCM 567
Query: 389 VDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
VDLLGR+G L +A +I M D DA W ALL A +H N +IAA+ LLE P
Sbjct: 568 VDLLGRAGLLAEALEMINSMPQNDHSDA--WAALLSASSLHSNLAFAKIAAQKLLEKDPY 625
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMM 473
+L+ +++S G +D E++K++
Sbjct: 626 DATAYTVLSRMFSSAGM-EDEEMLKVV 651
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 162/326 (49%), Gaps = 25/326 (7%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
G +L+ AR VFD +P+ + W +L+ ++ A R + L+ KM ++ G
Sbjct: 82 GGDLASARLVFDDMPR-RNAPSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYG----- 135
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKA 166
A+I G K ++ +A+ +++ M R+ + +A++AGY G +
Sbjct: 136 -------------AIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGELAM 182
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A ++ MT ++ ++W AM+ G K G V EA++VFD + E + W +M YV+ G
Sbjct: 183 ALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMC 242
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ + ++ MR+E V+++ + A+ AC + + + ++ +++
Sbjct: 243 RDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSI 302
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+S+ G++ A R F ++ KD++S++S+IT + H +EA +F M + +
Sbjct: 303 IIMYSRFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQK----DA 358
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELM 372
V++ ++ ++ G + + + FE M
Sbjct: 359 VSWTSMVVGFANRGWMRESVELFEQM 384
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 12/256 (4%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
L A++ Y + G + DAQ LFD M R+VISW+A++ YA+ G++ +A+ +D M +N+
Sbjct: 41 LNALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNA 100
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W A+++ Y + R A +F ++ +A + A+ +G AKA + + E
Sbjct: 101 PSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAII-----SGLAKAEMLHEAELVYE 155
Query: 240 NVRISEVAMVGA---ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ VG+ ++ ++G++ MA V EG R +A++ K G +
Sbjct: 156 EMPWQWRDPVGSNALMAGYLRVGELAMAL----RVFEGMTVRDVISWSAMVDGLCKHGSV 211
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
A R F + ++V+S++SMI + G ++ L +FL MR EG++ N T L AC
Sbjct: 212 SEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDAC 271
Query: 357 SHGGLVEDGCKQFELM 372
+ L +G + L+
Sbjct: 272 AAASLAREGIQIHNLI 287
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 205/354 (57%), Gaps = 1/354 (0%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A +LF M ER++ISW++M+ G CG M+ A+ +DRM ++ V+W MI GY K G V
Sbjct: 246 AWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRV 305
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISA 254
A+ +FDE+ E D + AM YVQNGY A+ ++ M+ + N + ++ A+SA
Sbjct: 306 DIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSA 365
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
QLG ++ + + ++E + ALI M+SKCG ++ A F IK K V +
Sbjct: 366 IAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHW 425
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+++I A HG + A D ++M +EP+ +TFIG+L AC H GLV++G FELM R
Sbjct: 426 NAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRR 485
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
V ++P +H CMVD+LGR+G +E+A + + + + W +LL ACK H + +G+
Sbjct: 486 VHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSACKTHESFNVGQ 545
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A +L+ L + L +N+YA +GKW D V+ M+ + KK PGCSWI
Sbjct: 546 PVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWI 599
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 185/384 (48%), Gaps = 37/384 (9%)
Query: 69 FLWTSLIRNHVLHAH-FRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGY 127
FLW ++I+ + H H ++++ L + M G FT S VL AC+RV + E G
Sbjct: 93 FLWNAIIKTYS-HGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKE----GM 147
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
GL+ + D + +IS+ Y CG + A + +DRM +++SV++ +MI
Sbjct: 148 QIHGLLKKLEFGSDLFLQNCLISF------YVKCGCLVRASQVFDRMPKRDSVSYNSMID 201
Query: 188 GYGKCGEVREAKKVFD--EISEPDASCWAAMTVCYVQNGYA-KAAIEMYKVMRQENVRIS 244
GY K G + A+ VFD + E + W ++ Y Q+ A +++ M + ++ IS
Sbjct: 202 GYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDL-IS 260
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT---NYVSNA-LIHMHSKCGYLDLAW 300
+M I C + G +E A +G DR + VS A +I ++K G +D+A
Sbjct: 261 WNSM---IDGCVKCGRMEDA--------QGLFDRMPNRDIVSWANMIDGYAKNGRVDIAR 309
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHG 359
F + +DV++Y++M+ + +G EAL +F M+++G + T + L+A +
Sbjct: 310 SLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQL 369
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
G ++ G + + G ++D+ + G +E A + + K+ W A
Sbjct: 370 GHIDKGVAIHRFIEEI-GFSLDGRLGVALIDMYSKCGSIENAMMVFENIKE-KSVDHWNA 427
Query: 420 LLGACKVHVNAELGEIAARHLLEL 443
++G +H LGE+A L+E+
Sbjct: 428 IIGGLAIH---GLGELAFDFLMEM 448
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 271/543 (49%), Gaps = 74/543 (13%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQY------HYYAQFLIRLLQLPGDNLSYARQVFDQI 62
R+ NQ K++ S++ L +P D + H YA+F L A+ +FD++
Sbjct: 34 RTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKF---------GKLRDAQNLFDKM 84
Query: 63 PKCKTQFLWTSLIRNHV-------LHAHF------------------------RQSILLY 91
K + F W +L+ + L A F ++S+ L+
Sbjct: 85 LK-RDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143
Query: 92 AKMHRLGVLTSGFTFSSVLNACARVPSL---------------------LEAVICGYTKI 130
+M R G + +T S+LNA A++ L A+ Y K
Sbjct: 144 KRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKC 203
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMI 186
G ++ A+ LFD + ++N++SW+ M++GYA G + +M + VT +I
Sbjct: 204 GEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII 263
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
A Y +CG V EA++VF E E D CW AM V Y +NG + A+ ++ M E++
Sbjct: 264 AAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSY 323
Query: 247 AMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ +S+C +L + A+ K + G + VS+ALI M+SKCG++D A F+
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL-LVSSALIDMYSKCGFIDDARSVFNL 382
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ ++V+S+++MI A +G ++AL++F M + +P+ VTFIG+L+AC H +E G
Sbjct: 383 MPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQG 442
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F+ +T G+ P +H CMV+LLGR+G++E+A +LI + D W LL C
Sbjct: 443 QEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICS 502
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+ E+AARHL EL P +L+N+YASMG+WKD V+ ++ KK G
Sbjct: 503 TKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGF 562
Query: 486 SWI 488
SWI
Sbjct: 563 SWI 565
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 45/189 (23%)
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
C + ++ A L H++ T+ ++ N L+H+++K G L A F ++ +D+ S
Sbjct: 32 CVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFS 91
Query: 314 YSSMITAFADHGK-------------------------------SQEALDMFLKMRNEGI 342
++++++A+A G QE+L++F +M+ EG
Sbjct: 92 WNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGF 151
Query: 343 EPNQVTFIGVLTACS------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
EP + T + +L A + +G + + VF LT D+ + G
Sbjct: 152 EPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALT-------DMYAKCG 204
Query: 397 QLEKAHSLI 405
++E+A L
Sbjct: 205 EIEQARWLF 213
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 242/464 (52%), Gaps = 59/464 (12%)
Query: 84 FRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV-------------------- 123
F LY +M +G+ +T +L AC++ + +EA+
Sbjct: 119 FTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNT 178
Query: 124 -ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG-NMKAAKEFY------DRMT 175
+ Y G ++ +++FD ++ISW+ ++ Y+ G +A F+ DRMT
Sbjct: 179 LMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTADRMT 238
Query: 176 ----------------EKNSVTWV---------------AMIAGYGKCGEVREAKKVFDE 204
K + ++ A++ Y KCG+ A+++F
Sbjct: 239 LVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHL 298
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ + W +M G K A+ M++ M+ ++ V +VG +++C LGD+E+
Sbjct: 299 MPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELG 358
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ ++D+ YV+NAL+ M++KCG +D A+ F +K KDV SY++MI FA H
Sbjct: 359 KWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMH 418
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
GK+ AL +F +M G+ P+ VT +GVL+ACSH GL+E+G + F+ M+R++ ++P TEH
Sbjct: 419 GKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEH 478
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
CMVDLLGR+G + +A + DA WG+LLGACK+H ELGE + L+E+
Sbjct: 479 YGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEME 538
Query: 445 PEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
PE+ G L++NIY+S +W+D+ + + + KK+PGCS I
Sbjct: 539 PERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSI 582
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 131/316 (41%), Gaps = 70/316 (22%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
+S F + Q+H++ +KT + + L+R + G + +VFDQ P
Sbjct: 150 QSHAFIEALQIHAHSIKTGLSSN---LFVKNTLMRFYAVSG-FIEAVEKVFDQGPHWDL- 204
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---------- 118
WT+LI+ + + ++I A R+ T VL+AC+++
Sbjct: 205 ISWTTLIQAYSKMGYPSEAI---AAFFRMNCTADRMTLVVVLSACSQLGDFTLGKKILAY 261
Query: 119 -------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
L A++ Y K G A++LF M +N++SW++M++G A+ G K
Sbjct: 262 MDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFK 321
Query: 166 AAKEFYDRMT----EKNSVT------------------WV-----------------AMI 186
A + RM + +SVT WV A++
Sbjct: 322 EALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALV 381
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
Y KCG + +A VF + D + AM V + +G A A+ ++ M + VR V
Sbjct: 382 DMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHV 441
Query: 247 AMVGAISACTQLGDVE 262
+VG +SAC+ G +E
Sbjct: 442 TLVGVLSACSHAGLLE 457
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 28/235 (11%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K VHSY+ K K Y A L+ + G ++ A VF Q KCK + +T++I
Sbjct: 359 KWVHSYIDKNHMKADG---YVANALVDMYAKCG-SIDQAFMVF-QAMKCKDVYSYTAMIV 413
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+H +++ ++++M R+GV T VL+AC+ GL+++
Sbjct: 414 GFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHA--------------GLLEEG 459
Query: 137 QRLFDSMA-----ERNVISWSAMVAGYANCGNMKAAKEFYDRMT-EKNSVTWVAMIAGYG 190
+R F M+ + + MV G + A+ F ++M ++ W +++
Sbjct: 460 RRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACK 519
Query: 191 KCGEVREAKKVFDEISEPDAS---CWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
+V + V ++ E + + M+ Y + A++ K M+Q N++
Sbjct: 520 IHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIK 574
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/499 (32%), Positives = 253/499 (50%), Gaps = 61/499 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A FDQI K W ++I + + + ++I L+ +M G + TF VL
Sbjct: 197 LDMAGLAFDQIEN-KDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLK 255
Query: 112 A---------------------CARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
A C+ + A++ Y+K ++D +R F M++RN++S
Sbjct: 256 ASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVS 315
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG------------------ 188
++A++ GY+ G + A Y ++ E +S T+V + +
Sbjct: 316 FNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSV 375
Query: 189 -----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
Y KCG A + F+ I+ P++ CWA + + QNG + A+
Sbjct: 376 KFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALM 435
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+ MR+ + E + I A + VE L HV + D T YV +A+I M+S
Sbjct: 436 QFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYS 495
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG ++ A + FS + K+V+S++SMIT +A +G +EAL +F +M + GI P VTF+G
Sbjct: 496 KCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVG 555
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+L ACSH GLVE+G + LM +GI P EH TCMVDLLGR+G LE+A + ++
Sbjct: 556 ILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFS 615
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
+ G WG+LL AC VH N+++G AA+H L L P + + L+NIYAS W + ++
Sbjct: 616 KEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIR 675
Query: 472 MMISETEKKKSPGCSWISS 490
++ + +K PGCSWI S
Sbjct: 676 DLMKDMGVEKEPGCSWIES 694
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 192/430 (44%), Gaps = 79/430 (18%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV--PSLLEAVICGYT 128
WTS I ++ Q++ + +M R G+ + T+S+ ++ACA+ PSL ++ C
Sbjct: 9 WTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCLIL 68
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K G + +LF S S +++ Y+ +K A+ +D M E++ V+W +MIAG
Sbjct: 69 KKGF---SNQLFVS---------SGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAG 116
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y + G EA +F C + N + E +K++ +S+ +
Sbjct: 117 YSQRGLNEEACGLF----------------CSMIN-----SCENWKLL------VSDFTL 149
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+ AC LG + + + + D +VS + ++M+ KCG LD+A F +I+N
Sbjct: 150 ATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIEN 209
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA-----------CS 357
KD++++++MIT +A + +EA+++F +M EG +PN TF VL A C
Sbjct: 210 KDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCF 269
Query: 358 HGGLVEDGCK-----------------QFELMTRVFG---IKPLTEH--LTCMVDLLGRS 395
H +++ GC E + R FG + L L L+G+
Sbjct: 270 HAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKY 329
Query: 396 GQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE---KTGNSA 452
+ + +S + D+ T+ L +C V G H ++ G + GNS
Sbjct: 330 EEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNS- 388
Query: 453 LLANIYASMG 462
+ N Y+ G
Sbjct: 389 -IVNFYSKCG 397
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+V+ ++S IT A G +AL FL+M GIEPN +T+ ++AC+
Sbjct: 5 NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQS---------- 54
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
TR L L C++ G S QL + LI Y
Sbjct: 55 ---TR----PSLATSLHCLILKKGFSNQLFVSSGLISMY 86
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 257/470 (54%), Gaps = 43/470 (9%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L YA+++FDQIP+ +F++ SLIR + ++LL+ +M G+ + FT VL
Sbjct: 163 DLQYAQRMFDQIPQ-PNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 221
Query: 111 NACARVPSLLEAV---------------------ICGYTKIGLMDDAQRLFDSMAERNVI 149
AC + EAV I Y GL+ A++LFD + ++ ++
Sbjct: 222 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLV 281
Query: 150 SWSAMVA----------------GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
SW++M+ YA CGN+ +A+ +DR EKN V+W +MI+ Y + G
Sbjct: 282 SWNSMIEITGVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHG 341
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
+ A+++FD++ + W +M CY++ G + A++++ MR V E +V ++
Sbjct: 342 SIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILA 401
Query: 254 ACTQLGDVEMAAILAKHV--DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
AC+QLGD+ M + ++ ++G T Y N+LI M++KCG + A F + K++
Sbjct: 402 ACSQLGDLVMGKKIHNYILSNKGAYGVTLY--NSLIDMYAKCGPVVTALDIFLEMPGKNL 459
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S++ +I A A HG EA+ +F +M+ +G P+++T G+L+ACSH GLV+ G F+
Sbjct: 460 VSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDR 519
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M ++ + EH CMVDLLGR G L +A LI D WGALLGAC++H N E
Sbjct: 520 MGVIYRVXREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVE 579
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SEIVKMMISETEKK 480
+G+ + LLEL P G L++NIY +W+D +I K+MI KK
Sbjct: 580 IGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKK 629
>gi|357163369|ref|XP_003579710.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Brachypodium distachyon]
Length = 548
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 208/364 (57%), Gaps = 1/364 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A+I Y G + A+ LFD + RN++ W+AMV GY CG++++A ++ M K +
Sbjct: 179 AIIIVYVNSGEIVAARELFDRIPHRNLVHWNAMVDGYVKCGDLESAGRLFEEMPRKTAAA 238
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
++I GY K G + AK +FD++ + D W+AM Y QNGY A ++ ++++
Sbjct: 239 HTSLIGGYAKAGNMEGAKLLFDKLQDRDVFAWSAMISGYAQNGYPGEAFRIFNEFHKQDI 298
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIHMHSKCGYLDLAW 300
E +V ++AC+QLG++ +A + ++ D N +V LI+M++KCG ++ A
Sbjct: 299 CPDEPVIVALMAACSQLGNIMLARWIEGYIGSYSIDINNAHVLAGLINMNAKCGNMERAT 358
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F + +DV SY SM+ HG + +A+++F +M EG+ P+ F VLTAC+H G
Sbjct: 359 VLFESMPVRDVFSYCSMMQGHCLHGSANKAVELFSRMLLEGLSPDNAVFTVVLTACNHAG 418
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LVE+ K F +M V+ I P +H C+V LLGR G L A+ +I AG+WGAL
Sbjct: 419 LVEEAKKYFGMMKNVYSIVPSGDHYACLVSLLGRFGILRDAYEIIKSMPGEPHAGSWGAL 478
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
LG C + + ELG+IAA+ L E+ P+ GN L+NIYA++ +W D ++ +S
Sbjct: 479 LGGCILQCDTELGKIAAKKLFEIEPDNAGNYVTLSNIYANIDRWTDVSKIRAEMSRKGLT 538
Query: 481 KSPG 484
K G
Sbjct: 539 KIAG 542
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 33/172 (19%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ A +F+ +P + F + S+++ H LH +++ L+++M G+ F+ VL
Sbjct: 353 NMERATVLFESMP-VRDVFSYCSMMQGHCLHGSANKAVELFSRMLLEGLSPDNAVFTVVL 411
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-------WSAMVAGYANCGN 163
AC GL+++A++ F M +NV S ++ +V+ G
Sbjct: 412 TAC--------------NHAGLVEEAKKYFGMM--KNVYSIVPSGDHYACLVSLLGRFGI 455
Query: 164 MKAAKEFYDRMT-EKNSVTWVAMIAGY-----GKCGEVREAKKVFDEISEPD 209
++ A E M E ++ +W A++ G + G++ AKK+F+ EPD
Sbjct: 456 LRDAYEIIKSMPGEPHAGSWGALLGGCILQCDTELGKI-AAKKLFE--IEPD 504
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 240/437 (54%), Gaps = 16/437 (3%)
Query: 56 RQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-FTFSSVLNACA 114
RQVF+++P+ + W LI +V + ++ ++ +M + L T S L+AC
Sbjct: 187 RQVFEEMPQ-RDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACI 245
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+ +LE L + R + +A+V Y CG++ A+E ++ M
Sbjct: 246 AL-KMLE----------LGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDM 294
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
K + W +M++GY CG++ EA+++F+ D W AM YVQ A+ +++
Sbjct: 295 PIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFR 354
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ + V +V ++ C QLG +E + ++DE V ALI M++KCG
Sbjct: 355 EMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCG 414
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+++ + F+ +K KD S++S+I A +GK+ +AL++F +M G++P+ +TFIGVL+
Sbjct: 415 FIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLS 474
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD- 413
ACSHGGLVE+G K F MT V+ I+P EH C++DLLGR+GQL++A LI + +
Sbjct: 475 ACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNE 534
Query: 414 --AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
+GALL AC+ H N E+GE A+ L+ + + LLANIYAS +W+D V+
Sbjct: 535 VIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVR 594
Query: 472 MMISETEKKKSPGCSWI 488
+ + KK PGCS +
Sbjct: 595 RKMKDLGVKKVPGCSSV 611
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G + A+++F+ I P + + + +NG + A+ +++ +R+E +
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
A LG+V + V + + YV N+L+ M+++ G + + F + +DV+
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
S++ +I+ + + ++A+D+F +M+ + + PN+ T + L+AC ++E G +
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY 259
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
+ G + +VD+ + G L A + D
Sbjct: 260 VREQLGFT--IKIGNALVDMYCKCGHLSIAREIFND 293
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 259/512 (50%), Gaps = 63/512 (12%)
Query: 39 QFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRL 97
+ + +L + + YA VF + W S++R V R+++ Y +M R
Sbjct: 15 KLIAHVLSMGSLGVGYAYSVFAH-TRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 98 GVLTSGFTFSSVLNACA-----RVPSLLEAVICGY----------------TKIGLMDDA 136
+ FTF S+L CA +V +L + Y G + A
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN------------------ 178
+ LF+ M RN + W++M++GY A Y +M E
Sbjct: 134 RFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAEL 193
Query: 179 ---------------------SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
+V A++ Y KCG+++ A++VFD++S+ D W+A+
Sbjct: 194 KDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALI 253
Query: 218 VCYVQNGYAKAAIEMYK-VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
YV+N + A+++++ V N+R +EV ++ ISAC QLGD+E + ++
Sbjct: 254 FGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK 313
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+ ++N+LI M SKCG +D A R F + KD+IS++SM+ A HG +EAL F
Sbjct: 314 GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHL 373
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M+ ++P+++TFIGVLTACSH GLV++G K F + ++G++ +EH CMVDLL R+G
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAG 433
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L +A I D WG++LGAC+V+ N ELGE AAR LLEL P G LL+N
Sbjct: 434 LLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSN 493
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
IYA W + + V+ +++E +K+PGCS +
Sbjct: 494 IYARRKMWNEVKKVRELMNEKGIQKTPGCSSV 525
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 259/477 (54%), Gaps = 24/477 (5%)
Query: 17 KQVHSYLLKTLT--KPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
KQ+H+ +++ L P Y A L+ L G A+ VF+ + + WT L
Sbjct: 290 KQLHAQVIRNLPCIDP-----YVASALVELYAKCG-CFKEAKGVFNSLHD-RNNVAWTVL 342
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMD 134
I + H F +S+ L+ +M + F +++++ C C + L
Sbjct: 343 IAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC-----------CSRMDLCLGR 391
Query: 135 DAQRL-FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
L S + V+ +++++ YA C N+++A+ + M EK+ V+W +MI + + G
Sbjct: 392 QLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVG 451
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAI 252
+ +A++ FD +S + W AM Y+Q+G + + MY VM E +VR V V
Sbjct: 452 NIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLF 511
Query: 253 SACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
C LG ++ I+ + V G T+ V+NA+I M+SKCG + A + F + KD+
Sbjct: 512 KGCADLGANKLGDQIIGRTVKVGLILDTS-VANAVITMYSKCGRILEARKVFDFLNVKDI 570
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S+++MIT ++ HG ++A+++F + G +P+ ++++ VL+ CSH GLV++G F++
Sbjct: 571 VSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDM 630
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M RV I P EH +CMVDLLGR+G L +A LI + A WGALL ACK+H N E
Sbjct: 631 MKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNE 690
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L E+AA+H+ EL +G+ L+A IYA GK DS ++ ++ + KK+PG SW+
Sbjct: 691 LAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWM 747
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 142/308 (46%), Gaps = 16/308 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-SGFTFSSVL 110
LS A ++F ++P + W +L+ + + S+ + MHR G + + FTF+ +
Sbjct: 87 LSDAVELFGRMP-ARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAM 145
Query: 111 NACARVP--SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
+C + SL ++ K G DD+ +A+V + CG + A
Sbjct: 146 KSCGALGERSLALQLLGMVQKFGSQDDSDVA------------AALVDMFVRCGTVDLAS 193
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+ R+ E +M+ GY K V A ++FD + E D W M Q+G +
Sbjct: 194 RLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVRE 253
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A++M M+ + VR+ +++AC +L + L V YV++AL+
Sbjct: 254 ALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVE 313
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
+++KCG A F+ + +++ ++++ +I F HG E++++F +MR E + +Q
Sbjct: 314 LYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFA 373
Query: 349 FIGVLTAC 356
+++ C
Sbjct: 374 LATLISGC 381
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 33/239 (13%)
Query: 152 SAMVAGYANCGNMKAAKEFY-DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
+ ++ Y +CG + A+ + N +T M+ GY K G + +A ++F + D
Sbjct: 43 NTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDV 102
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
+ W + Y Q+ A++E + M R + + A+ +C LG+ +A L
Sbjct: 103 ASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLG 162
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN--------------------- 308
V + + V+ AL+ M +CG +DLA R F RIK
Sbjct: 163 MVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDH 222
Query: 309 ----------KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
+DV+S++ M++A + G+ +EALDM + M+++G+ + T+ LTAC+
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 229/422 (54%), Gaps = 9/422 (2%)
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICG 126
T +W +LI H F ++ + M R G + T+ SVL+AC + V+ G
Sbjct: 108 TPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTG---DVLLG 164
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
G + + L D E +A+V YA C +M++A + +D M ++ V+W +++
Sbjct: 165 MQVHGRVVGSGVLPDLRVE------NALVDMYAECADMESAWKLFDGMQVRSVVSWTSLL 218
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
+G + G V EA+ +F + E D W AM YVQ + A+EM++ M+ NV E
Sbjct: 219 SGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEF 278
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
MV I+AC QLG +EM + ++ +V NALI M+SKCG ++ A F +
Sbjct: 279 TMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM 338
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
++D +++++I A +G +EA++MF +M P++VTFIGVLTAC+H GLV+ G
Sbjct: 339 HHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGR 398
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
+ F M + I P H C++DL GR+G++ +A I ++ WG LL AC+V
Sbjct: 399 EFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRV 458
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H N+E+GE+ LL++ PE + LL+NIYA +W+D ++ I E KK PGCS
Sbjct: 459 HGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCS 518
Query: 487 WI 488
I
Sbjct: 519 LI 520
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 244/433 (56%), Gaps = 11/433 (2%)
Query: 56 RQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR 115
R+VFD + + W ++ ++ ++++++LL+AKM GV+ ++VL AC
Sbjct: 205 RKVFDGM-AVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLILATVLPACGH 263
Query: 116 VPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
+ L +IG + L M IS SA+++ YA+C NM+ A++ Y+ M
Sbjct: 264 IRHL---------RIGKAIHSYMLVSDMIIGAHIS-SALISLYASCANMEMAEKLYNEMP 313
Query: 176 EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKV 235
K+ V+ AM++GY + +V A+ +FD + E D W+AM YV + A+ ++
Sbjct: 314 RKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNG 373
Query: 236 MRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
M++ +R E+ M+ ISAC LG ++ A + + ++ ++ NALI M +KCG
Sbjct: 374 MQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGG 433
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
++LA F+ + K+VI+++SMI+AFA HG + +L +F +M++EG EPN+VTF+ +L A
Sbjct: 434 INLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEVTFLSLLYA 493
Query: 356 CSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
C H GLV +G F M + +GI+P EH CMVDLLGR+ +++A SLI +
Sbjct: 494 CCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLEPNVP 553
Query: 416 TWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMIS 475
WG+LL AC +H + +LG AA+ +L+L P G S LL IY +++ V+ ++
Sbjct: 554 IWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNAQEVRGVMK 613
Query: 476 ETEKKKSPGCSWI 488
K G SW+
Sbjct: 614 LHRVSKETGLSWM 626
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 122/276 (44%), Gaps = 33/276 (11%)
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A+ Y CG VR+ +KVFD ++ D W M Y Q K A+ ++ M+ V
Sbjct: 189 TALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVV 248
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA--- 299
++ + + AC + + + + ++ ++S+ALI +++ C +++A
Sbjct: 249 PDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKL 308
Query: 300 WREFSR----------------------------IKNKDVISYSSMITAFADHGKSQEAL 331
+ E R + KDV+S+S+MI+ + D + EAL
Sbjct: 309 YNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEAL 368
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
+F M+ GI +++T + V++AC++ G + D K + G+ + ++D+
Sbjct: 369 SLFNGMQECGIRSDEITMLSVISACANLGSL-DKAKWIHAFIKNSGLNKVLHICNALIDM 427
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+ G + A + + + + TW +++ A +H
Sbjct: 428 FAKCGGINLALN-VFNEMPLKNVITWTSMISAFAMH 462
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
+AA A V G D +V AL ++ CG + + F + +DV+S+ M+ ++
Sbjct: 169 VAATHALAVRTGALD-DGFVGTALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYC 227
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
+EAL +F KM+N G+ P+Q+ VL AC H
Sbjct: 228 QTRNYKEALLLFAKMKNSGVVPDQLILATVLPACGH 263
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 243/434 (55%), Gaps = 11/434 (2%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD + + W ++ ++ ++++++L +AKM GVL+ ++VL+AC
Sbjct: 124 ARKVFDGM-AVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLILATVLSACG 182
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+ L + G + L + +S SA++ YA+C +M+ A++ Y+ M
Sbjct: 183 HIRHL---------RTGKSIHSYMLVSDILINAHLS-SALINLYASCASMEMAEKLYNGM 232
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
K+ V+ AM+ GY + + A+ +FD + E D W+AM Y + A+ ++
Sbjct: 233 PRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFN 292
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M++ +R EV M+ ISAC LG ++ A + + ++ ++ NALI M +KCG
Sbjct: 293 DMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCG 352
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
++LA F+ + K+VI+++SMITAFA HG + AL +F +MRNEG+EPN+VTF+ +L
Sbjct: 353 GINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLY 412
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC H GLV +G F M + +GI+P EH CMVDLLGR+ +++A +LI +
Sbjct: 413 ACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNV 472
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
WG+LL AC +H + +LG AA+ +L+L P G S LL+ IY D++ V+ ++
Sbjct: 473 PVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVM 532
Query: 475 SETEKKKSPGCSWI 488
K G SW+
Sbjct: 533 KLQGVSKETGLSWM 546
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 165/392 (42%), Gaps = 55/392 (14%)
Query: 78 HVLHAHFRQ-SILLYAKMHRLGV-----LTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
H H H RQ +L + H++ L + + + A A P L+ A + G
Sbjct: 4 HTHHHHLRQLQAVLLRRGHQIPSPPTTHLDPDRAYLATIRAAATTPRLVLAACACLRRTG 63
Query: 132 LMDDAQRLFDSM---AERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
L R ++ A R V + + + +A + + + + R A++
Sbjct: 64 LPPPGPRALPALLRSAARCVGAGAYVRGAHALAFRVGSLDDGFVR---------TALVGA 114
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y CG V +A+KVFD ++ D W M Y Q K A+ + M+ V ++ +
Sbjct: 115 YAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLIL 174
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE------ 302
+SAC + + + ++ ++S+ALI++++ C +++A +
Sbjct: 175 ATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGMPR 234
Query: 303 -------------------------FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
F + KDV+S+S+MI+ +AD + EAL +F M
Sbjct: 235 KDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDM 294
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ GI P++VT + V++AC++ G + D K + G+ + ++D+ + G
Sbjct: 295 QECGIRPDEVTMLSVISACANLGSL-DKAKWIHAFIKNNGLNKILHICNALIDMFAKCGG 353
Query: 398 LEKAHSLI--MDYKDFCDAGTWGALLGACKVH 427
+ A ++ M K+ TW +++ A +H
Sbjct: 354 INLALNIFNEMPQKNVI---TWTSMITAFAMH 382
>gi|242073008|ref|XP_002446440.1| hypothetical protein SORBIDRAFT_06g016100 [Sorghum bicolor]
gi|241937623|gb|EES10768.1| hypothetical protein SORBIDRAFT_06g016100 [Sorghum bicolor]
Length = 349
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 196/330 (59%), Gaps = 1/330 (0%)
Query: 143 MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVF 202
M RN + W+ MV GY CG+++ AK +D M E+ + ++I GY K G + A+ +F
Sbjct: 1 MPHRNAVHWNLMVDGYVKCGDLEGAKRLFDEMPERTATACTSLIGGYAKTGNMEIARLLF 60
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
D++ + D W+ M Y QNGY A+ + + + + E+ +VG +SAC+QLG++
Sbjct: 61 DKLEDRDLFSWSVMISGYAQNGYPGEALRTFDEFQGQGIHPDELLVVGLMSACSQLGNIR 120
Query: 263 MAAILAKHVDEGCCDRTN-YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
+A + +V + D N +V L++M++KCG L+ A F + +DV SY S++
Sbjct: 121 LARWIEDYVTKYSIDMKNAHVLAGLVNMNAKCGNLERATVLFESMPVRDVFSYCSLMQGH 180
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
HG + +A+++F +M EG+ P+ F VLTACSH GLVE+ K F++M V+ I P
Sbjct: 181 CLHGSANKAVELFSQMLLEGLSPDNAAFTVVLTACSHAGLVEEAKKFFDMMKNVYLIVPS 240
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
EH C+V LLGR G LE A+ LIM G WGALLG CK+H N ELG+IAA+ L
Sbjct: 241 GEHYGCLVSLLGRCGMLEDAYQLIMSMPGKPHPGAWGALLGGCKLHCNIELGKIAAKKLF 300
Query: 442 ELGPEKTGNSALLANIYASMGKWKDSEIVK 471
E+ P+ GN L+N+YA++ +W D V+
Sbjct: 301 EIEPDNAGNYVSLSNMYANIDRWGDVSEVR 330
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 40/190 (21%)
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA--------------- 159
R + ++I GY K G M+ A+ LFD + +R++ SWS M++GYA
Sbjct: 35 RTATACTSLIGGYAKTGNMEIARLLFDKLEDRDLFSWSVMISGYAQNGYPGEALRTFDEF 94
Query: 160 --------------------NCGNMKAAKEFYDRMTE-----KNSVTWVAMIAGYGKCGE 194
GN++ A+ D +T+ KN+ ++ KCG
Sbjct: 95 QGQGIHPDELLVVGLMSACSQLGNIRLARWIEDYVTKYSIDMKNAHVLAGLVNMNAKCGN 154
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+ A +F+ + D + ++ + +G A A+E++ M E + A ++A
Sbjct: 155 LERATVLFESMPVRDVFSYCSLMQGHCLHGSANKAVELFSQMLLEGLSPDNAAFTVVLTA 214
Query: 255 CTQLGDVEMA 264
C+ G VE A
Sbjct: 215 CSHAGLVEEA 224
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 28/183 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
NL A +F+ +P + F + SL++ H LH +++ L+++M G+ F+ VL
Sbjct: 154 NLERATVLFESMP-VRDVFSYCSLMQGHCLHGSANKAVELFSQMLLEGLSPDNAAFTVVL 212
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI-----SWSAMVAGYANCGNMK 165
AC+ GL+++A++ FD M +I + +V+ CG ++
Sbjct: 213 TACSHA--------------GLVEEAKKFFDMMKNVYLIVPSGEHYGCLVSLLGRCGMLE 258
Query: 166 AAKEFYDRMTEK-NSVTWVAMIAGYG-----KCGEVREAKKVFDEISEPDASCWAAMTVC 219
A + M K + W A++ G + G++ AKK+F EI +A + +++
Sbjct: 259 DAYQLIMSMPGKPHPGAWGALLGGCKLHCNIELGKI-AAKKLF-EIEPDNAGNYVSLSNM 316
Query: 220 YVQ 222
Y
Sbjct: 317 YAN 319
>gi|125560040|gb|EAZ05488.1| hypothetical protein OsI_27705 [Oryza sativa Indica Group]
Length = 1165
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 250/447 (55%), Gaps = 29/447 (6%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++S AR+VFD +P+ + WTS+IR +V R +LL+ M R GV + T S L
Sbjct: 210 SVSEARRVFDAMPE-RNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVAL 268
Query: 111 NACA---------RVPSLL------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA ++ +L+ +++I Y++ G M DA+R FD M +++++
Sbjct: 269 DACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIV 328
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
SW++++ GY ++ A + M +K++V+W +M+ G+ G +RE+ ++F+++ D
Sbjct: 329 SWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKD 388
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILA 268
W A+ ++ NG +A+ + M QE + + +A +SA L + A
Sbjct: 389 EVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHA 448
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
++ G + V +L+ M++KCG L A+ FS I N +I+ +SMITAF HG +
Sbjct: 449 YSINMGWV-FDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVE 507
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
+AL +F KM+N G +PN VTF+G+LT C+ G V+ G FE M V+G++P EH TCM
Sbjct: 508 DALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCM 567
Query: 389 VDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
VDLLGR+G L +A +I M D DA W ALL A +H N +IAA+ LLE P
Sbjct: 568 VDLLGRAGLLAEALEMINSMPQNDHSDA--WAALLSASSLHSNLAFAKIAAQKLLEKDPY 625
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMM 473
+L+ +++S G +D E++K++
Sbjct: 626 DATAYTVLSRMFSSAGM-EDEEMLKVV 651
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 161/326 (49%), Gaps = 25/326 (7%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
G +L+ AR VFD +P+ + W +L+ ++ A R + L+ KM ++ G
Sbjct: 82 GGDLASARLVFDDMPR-RNAPSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYG----- 135
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKA 166
A+I G K ++ +A+ +++ M R+ + +A++AGY G +
Sbjct: 136 -------------AIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGELAM 182
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A ++ MT ++ ++W AM+ G K G V EA++VFD + E + W +M YV+ G
Sbjct: 183 ALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMC 242
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ + ++ MR+E V+++ + A+ AC + + + ++ +++
Sbjct: 243 RDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSI 302
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+S+ G + A R F ++ KD++S++S+IT + H +EA +F M + +
Sbjct: 303 IIMYSRFGCMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQK----DA 358
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELM 372
V++ ++ ++ G + + + FE M
Sbjct: 359 VSWTSMVVGFANRGWMRESVELFEQM 384
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 12/256 (4%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
L A++ Y + G + DAQ LFD M R+VISW+A++ YA+ G++ +A+ +D M +N+
Sbjct: 41 LNALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNA 100
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W A+++ Y + R A +F ++ +A + A+ +G AKA + + E
Sbjct: 101 PSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAII-----SGLAKAEMLHEAELVYE 155
Query: 240 NVRISEVAMVGA---ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ VG+ ++ ++G++ MA V EG R +A++ K G +
Sbjct: 156 EMPWQWRDPVGSNALMAGYLRVGELAMAL----RVFEGMTVRDVISWSAMVDGLCKHGSV 211
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
A R F + ++V+S++SMI + G ++ L +FL MR EG++ N T L AC
Sbjct: 212 SEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDAC 271
Query: 357 SHGGLVEDGCKQFELM 372
+ L +G + L+
Sbjct: 272 AAASLAREGIQIHNLI 287
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 254/496 (51%), Gaps = 63/496 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD++P K LW ++ +V + + + ++ +M R + TF+ VL+ CA
Sbjct: 201 ARYLFDRMPS-KDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA 259
Query: 115 R--------------VPSLLE---------AVICGYTKIGLMDDAQRLFDSMAERNVISW 151
V S LE A+I Y K ++ A+++FD +++
Sbjct: 260 SEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVC 319
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG------------------- 188
+AM++GY G A E + + ++ NSVT +++
Sbjct: 320 TAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILK 379
Query: 189 ----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
Y KCG + A + F IS+ DA CW +M QNG + AI++
Sbjct: 380 NGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDL 439
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
++ M + V++ A+SAC L + + + G + +ALI M+SK
Sbjct: 440 FRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSK 499
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG LDLA R F ++ K+ +S++S+I A+ +HG+ +++L++F M +GI+P+ VTF+ +
Sbjct: 500 CGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAI 559
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
++AC H G V++G F MT GI EH CMVDL GR+G+L +A +I
Sbjct: 560 ISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSP 619
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
DAG WG LLGAC++H N EL E+A+R+L +L P+ +G LL+N++A+ G+W+ ++
Sbjct: 620 DAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRS 679
Query: 473 MISETEKKKSPGCSWI 488
++ E +K PGCSWI
Sbjct: 680 LMKERGVQKVPGCSWI 695
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 147/362 (40%), Gaps = 57/362 (15%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
W +IR + F ++L Y KM G L +TF V+ AC + S+ + + KI
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVV-HDKI 173
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
M E +V S+++ Y+ G + A+ +DRM K+ V W M+ GY
Sbjct: 174 QFMG---------FELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
K G+ A VF E MR+ + V
Sbjct: 225 KNGDWDNATGVFME-------------------------------MRRTETNPNSVTFAC 253
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN--ALIHMHSKCGYLDLAWREFSRIKN 308
+S C + + L V + + V+N ALI ++ KC +++A + F +
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTP 313
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
D++ ++MI+ + +G + AL++F + E + N VT VL AC+ G
Sbjct: 314 VDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACA-------GLAA 366
Query: 369 FELMTRVFGIKPLTEH------LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
L + G H + ++D+ + G+L+ AH + D DA W +++
Sbjct: 367 LTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD-KDAVCWNSMIT 425
Query: 423 AC 424
+C
Sbjct: 426 SC 427
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H ++LK H Y ++ + G L A Q F I K W S+I
Sbjct: 371 KELHGHILK---NGHGGSCYVGSAIMDMYAKCG-RLDLAHQTFIGISD-KDAVCWNSMIT 425
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL---------------- 120
+ + ++I L+ +M G + S+ L+ACA +P+L
Sbjct: 426 SCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRS 485
Query: 121 -----EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM- 174
A+I Y+K G +D A R+FD+M E+N +SW++++A Y N G +K + + M
Sbjct: 486 DLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGML 545
Query: 175 ---TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE-----PDASCWAAMTVCYVQNGYA 226
+ + VT++A+I+ G G+V E F ++E +A M + + G
Sbjct: 546 GDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRL 605
Query: 227 KAAIEMYKVMRQENVRISEVAMVGA-ISACTQLGDVEMAAILAKHV 271
A M M + + G + AC G+VE+A + ++++
Sbjct: 606 NEAFGMINSMPFS----PDAGVWGTLLGACRLHGNVELAEVASRNL 647
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 8/184 (4%)
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAMTVCYVQNGYAKAAIEMY 233
N + ++ Y CG +AK +F ++ SEP W M + G A+ Y
Sbjct: 80 NGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEP----WNWMIRGFTMMGQFDFALLFY 135
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M + I AC L V + ++ + + +V ++LI +S+
Sbjct: 136 FKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSEN 195
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A F R+ +KD + ++ M+ + +G A +F++MR PN VTF VL
Sbjct: 196 GCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVL 255
Query: 354 TACS 357
+ C+
Sbjct: 256 SVCA 259
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 267/535 (49%), Gaps = 66/535 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+ VH+ ++KTL P + A +LI + D+ AR V P + WTSLI
Sbjct: 26 RVVHARIVKTLDSPPPPF--LANYLINMYS-KLDHPESARLVLRLTP-ARNVVSWTSLIS 81
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVPSLLE-----AVICG--- 126
+ HF +++ + +M R GV+ + FTF A A R+P + AV CG
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 127 -----------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
Y K L DDA++LFD + ERN+ +W+A ++ G + A E +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 176 E----KNSVTWVA-----------------------------------MIAGYGKCGEVR 196
NS+T+ A +I YGKC ++R
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
++ +F E+ +A W ++ YVQN + A +Y R++ V S+ + +SAC
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
+ +E+ + H + C +RT +V +AL+ M+ KCG ++ + + F + K++++ +S
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381
Query: 317 MITAFADHGKSQEALDMFLKM--RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+I +A G+ AL +F +M R G PN +TF+ +L+ACS G VE+G K F+ M
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+GI+P EH +C+VD+LGR+G +E+A+ I WGAL AC++H +LG
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
+AA +L +L P+ +GN LL+N +A+ G+W ++ V+ + KK G SWI+
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWIT 556
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/484 (31%), Positives = 255/484 (52%), Gaps = 31/484 (6%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
Y+A L+ G LS AR++FD+IP + W L + +++ +++M
Sbjct: 63 YFAAKLMSFYTECGQ-LSNARKLFDKIPNTNIR-RWIVLTGACARRGFYEEALSAFSEMQ 120
Query: 96 RLGVLTSGFTFSSVLNACARVPS---------------------LLEAVICGYTKIGLMD 134
+ G+ + F S+L AC + ++ A+I Y+K G ++
Sbjct: 121 KEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVE 180
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYG 190
A R+FD + +++++ +AMV+GYA G + A +M + N V+W +IAG+
Sbjct: 181 KACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFS 240
Query: 191 KCGEVREAKKVFDEIS----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
+ G+ +VF ++ EPD W ++ +VQN + + +K M + S V
Sbjct: 241 QVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSV 300
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+ + ACT + ++ + + ++ YV +AL+ M++KCGY+ A F +
Sbjct: 301 TISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMM 360
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
++ ++++S+I +A+HG EA+++F +M + + +TF VL ACSH G+VE G
Sbjct: 361 PERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGE 420
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
F M + I+P EH CMVDLLGR+G+L +A+ LI D WGALLGAC+
Sbjct: 421 SLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRN 480
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H N EL E+AA HL EL PE G+S LL+N+YA G+W ++ +K M+ + + K PGCS
Sbjct: 481 HGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCS 540
Query: 487 WISS 490
WI +
Sbjct: 541 WIEA 544
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 190/487 (39%), Gaps = 116/487 (23%)
Query: 76 RNHVLHAHFRQSILLYAK----MHRLGVLTSGFTFSS--VLNACARVPSLLEAVICGYTK 129
RN H F+ S YAK R L G + V+ AR+ ++ YT+
Sbjct: 15 RNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTE 74
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN-------------------------- 163
G + +A++LFD + N+ W + A G
Sbjct: 75 CGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSI 134
Query: 164 MKAAKEFYDRMTEKNSVTWV-------------AMIAGYGKCGEVREAKKVFDEISEPDA 210
+KA DR T +N T + A+I Y KCG V +A +VFD I + D
Sbjct: 135 LKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDL 194
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
AM Y Q+G+ A+ + + M+Q V+ + V+ I+ +Q+GD M + + +
Sbjct: 195 VVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRL 254
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ + DV+S++S+I+ F + + E
Sbjct: 255 MTANGVE-------------------------------PDVVSWTSVISGFVQNFHNHEG 283
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
D F +M ++G P+ VT +L AC++ + G K+ V G++ + +VD
Sbjct: 284 FDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHG-KEIHGYAMVIGVEKDVYVRSALVD 342
Query: 391 LLGRSGQLEKA---------------HSLIMDYKD--FC-----------------DAGT 416
+ + G + +A +SLI Y + +C D T
Sbjct: 343 MYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLT 402
Query: 417 WGALLGACKVHVNAELGEIAARHLLE---LGPEKTGNSALLANIYASMGKWKDS-EIVKM 472
+ A+L AC ELGE R + E + P + + A + ++ GK ++ +++K
Sbjct: 403 FTAVLNACSHAGMVELGESLFRKMQEKYRIEP-RLEHYACMVDLLGRAGKLSEAYDLIKA 461
Query: 473 MISETEK 479
M E +K
Sbjct: 462 MPVEPDK 468
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/579 (29%), Positives = 281/579 (48%), Gaps = 99/579 (17%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL-PGDNLSYARQVFDQIPK 64
L+ + K N KQ+HS ++KT + + LI + P +LSYA +F++ +
Sbjct: 34 LLEKCKNINTFKQIHSLIIKTGL---NNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQ 90
Query: 65 CKTQ--FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE- 121
F+W SLIR + L + S+ L+++M GV + TF + +C + + E
Sbjct: 91 HHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEG 150
Query: 122 ---------------------------------------------------AVICGYTKI 130
A+I GY
Sbjct: 151 KQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQ 210
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV---------- 180
G +DDA+RLFD + ++V+SW+AM++GY G + A + M E N +
Sbjct: 211 GCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVL 270
Query: 181 ----------------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDAS 211
+WV A+I Y KCGE A+++FD I E D
Sbjct: 271 SACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVI 330
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W M Y + A+ +++VM + NV+ ++V +G + AC LG +++ + ++
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYI 390
Query: 272 DEGCCDRTN-YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
D+ + +N + +LI M++KCG ++ A R F + ++++ S+++M++ FA HG ++ A
Sbjct: 391 DKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERA 450
Query: 331 LDMFLKMRNEGI-EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
L +F +M N+G+ P+ +TF+GVL+AC+ GLV+ G + F M + +GI P +H CM+
Sbjct: 451 LALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMI 510
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLL R+ + E+A L+ + + D WG+LL ACK H E GE A L +L PE G
Sbjct: 511 DLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAG 570
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYA G+W D ++ +++ KK PGC+ I
Sbjct: 571 AFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSI 609
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 211/367 (57%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A++ Y K G D A+ FD R+V + M+A Y G + A+ +D M E++ V+
Sbjct: 80 ALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMVS 139
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W MI GY GEV A++VF+ + + DA W++M Y + +K A+E+++ MR V
Sbjct: 140 WNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACV 199
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
MV +SAC+ +G + + A + + V+ + + ALI M++KCG ++ + R
Sbjct: 200 NPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVR 259
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F + KDV+++SSMI A+HG +AL +F +M +EG++PN+VTFIGVL +C+H GL
Sbjct: 260 VFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGL 319
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V DG K F M+ V G+ P +H CMVDLLGRSG +E+A LI D DA W ALL
Sbjct: 320 VSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALL 379
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC+++ N E+ E A L L P G+ LL+NIYA W+ ++ + ++
Sbjct: 380 GACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQR 439
Query: 482 SPGCSWI 488
PG S I
Sbjct: 440 IPGRSSI 446
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 61/341 (17%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC- 113
AR+VF+ + + F W+S++ + + ++ L+ +M V T SVL+AC
Sbjct: 156 AREVFNGMDD-RDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACS 214
Query: 114 --------ARVPSLLE------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
A V +E A+I Y K G ++++ R+F SM ++V++WS+
Sbjct: 215 DMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSS 274
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--- 206
M+ G AN G A + RM + N VT++ ++ G V + KK F +S
Sbjct: 275 MIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVH 334
Query: 207 --EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
P + M ++G+ + A ++ + M E + A++G AC +VE+A
Sbjct: 335 GVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLG---ACRIYKNVEVA 391
Query: 265 A-------ILAKHVDEGCCDRTNYV--SNALIHMHSKCGYLD----LAWREFSRIKNKDV 311
+L H D +YV SN +S G + L RI +
Sbjct: 392 EEAMAKLRVLDPHAD------GHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSS 445
Query: 312 ISYSSMITAF----ADHGKSQEAL----DMFLKMRNEGIEP 344
I + + I F H +S+E +M ++R G +P
Sbjct: 446 IEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKP 486
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 262/532 (49%), Gaps = 94/532 (17%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D L YA VF+ I + Q +W ++IR H L + S+ LY M LG+L + +TF +
Sbjct: 12 DGLPYATSVFETIQE-PNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70
Query: 110 LNACARVPSLLE------------------------------------------------ 121
L +CA+ + E
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130
Query: 122 ----AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
A+I GY G + AQ+LFD + ++V+SW+AM++GYA G K A E ++ M +
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190
Query: 178 N-------------------SV-------TWV-------------AMIAGYGKCGEVREA 198
N S+ +WV A+I Y KCGEV A
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+F +S D W + Y K A+ +++ M + ++V M+ + AC L
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHL 310
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
G +++ + ++D+ TN S +LI M++KCG ++ A + F+ + +K + S+++
Sbjct: 311 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 370
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI FA HG++ + D+F +MR GIEP+ +TF+G+L+ACSH G+++ G F MT+ +
Sbjct: 371 MIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDY 430
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
+ P EH CM+DLLG SG ++A +I + D W +LL ACK+H N EL E
Sbjct: 431 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESF 490
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A++L+++ PE + LL+NIYAS G+W+D ++ +++ KK PGCS I
Sbjct: 491 AQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSI 542
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 243/462 (52%), Gaps = 26/462 (5%)
Query: 31 HDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK---CKTQFLWTSLIRNHVLHAHFRQS 87
D + Y FLI+ L G ++ R V + K + F+ +LI + + F +
Sbjct: 127 RDSFTY--SFLIKALSAAG--VAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDA 182
Query: 88 ILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERN 147
++ +M V++ + + G + ++LFD M E++
Sbjct: 183 RKVFDEMPERDVVS------------------WNTAMAAMVREGELAGVRKLFDEMPEKD 224
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
+SW+ ++ GY G ++AA E + RM E+N V+W M++GY K G++ A+ +FD++
Sbjct: 225 TVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPS 284
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
+ W M Q G A +++ M++ +V + A+V ++AC + G + + +
Sbjct: 285 KNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRI 344
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF-SRIKNKDVISYSSMITAFADHGK 326
++V + R+ +V NALI M KCG ++ A F + KD +S++S+I FA HG
Sbjct: 345 HRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGH 404
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+AL++F +M+ +G P+ VT I VL+AC+H G V++G + F M R +GI P EH
Sbjct: 405 GDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYG 464
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
CM+DLLGR G +++A LI + WG+LL AC++H N E EIA L +L P
Sbjct: 465 CMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPS 524
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
GN A+L+NIYA G+W D +M + T +K+ G SW+
Sbjct: 525 NAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWV 566
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 147/343 (42%), Gaps = 55/343 (16%)
Query: 85 RQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA 144
R ++ ++ M R T F + L+A P + AV K+G ++D
Sbjct: 115 RDALAAFSAMPRRDSFTYSFLIKA-LSAAGVAP--VRAVHSHVVKLGSVED--------- 162
Query: 145 ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
+A++ Y+ G A++ +D M E++ V+W +A + GE+ +K+FDE
Sbjct: 163 ---TFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDE 219
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ E D W + Y + G +AA E+++ M + NV V+ +S + GD+EMA
Sbjct: 220 MPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNV----VSWSTMVSGYCKKGDLEMA 275
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
++ F ++ +K++++++ M++A A
Sbjct: 276 RVI-----------------------------------FDKMPSKNLVTWTIMVSACAQK 300
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
G EA +F +M+ +E + + +L AC+ G + G K+ R + T
Sbjct: 301 GLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLG-KRIHRYVRKRNLGRSTHV 359
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++D+ + G + +A + D+ +W +++G +H
Sbjct: 360 CNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMH 402
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 248/461 (53%), Gaps = 26/461 (5%)
Query: 32 DQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK---CKTQFLWTSLIRNHVLHAHFRQSI 88
D + Y FLI+ L G ++ R V + K + F+ +LI + + F +
Sbjct: 5 DSFTY--SFLIKALSAAG--VAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDAR 60
Query: 89 LLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNV 148
++ +M V++ +++ + A R E + G ++LFD M E++
Sbjct: 61 KVFDEMPERDVVS----WNTAMAAMVR-----EGELAG---------VRKLFDEMPEKDT 102
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP 208
+SW+ ++ GY G ++AA E + RM E+N V+W M++GY K G++ A+ +FD++
Sbjct: 103 VSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSK 162
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
+ W M Q G A +++ M++ +V + A+V ++AC + G + + +
Sbjct: 163 NLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIH 222
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF-SRIKNKDVISYSSMITAFADHGKS 327
++V + R+ +V NALI M KCG ++ A F + KD +S++S+I FA HG
Sbjct: 223 RYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHG 282
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+AL++F +M+ +G P+ VT I VL+AC+H G V++G + F M R +GI P EH C
Sbjct: 283 DKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGC 342
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
M+DLLGR G +++A LI + WG+LL AC++H N E EIA L +L P
Sbjct: 343 MIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSN 402
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
GN A+L+NIYA G+W D +M + T +K+ G SW+
Sbjct: 403 AGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWV 443
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 246/444 (55%), Gaps = 16/444 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ A++ FD + + W SLI + + +++ ++ +M G+ T +SV +
Sbjct: 202 VASAQRAFDDM-DVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVAS 260
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
ACA + ++ E GL A+ + +++ +A+V YA C + A+ +
Sbjct: 261 ACASLSAIRE---------GLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVF 311
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
DRM ++ V+ +M++GY K V+ A+ +F + E + W A+ Y QNG + A+
Sbjct: 312 DRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVR 371
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV------DEGCCDRTNYVSNA 285
++ ++++E++ + ++AC L D+++ H+ + D +V N+
Sbjct: 372 LFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNS 431
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
LI M+ KCG ++ F R+ +D +S+++MI +A +G EAL++F +M G P+
Sbjct: 432 LIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPD 491
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
VT IGVL+ACSH GLVE+G F+ MT G+ P+ +H TCMVDLLGR+G L++A++LI
Sbjct: 492 HVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLI 551
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
DA WG+LL ACKVH N LG+ A LLE+ P +G LL+N+YA +G+WK
Sbjct: 552 QTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWK 611
Query: 466 DSEIVKMMISETEKKKSPGCSWIS 489
D V+ + + K PGCSWIS
Sbjct: 612 DVVRVRKQMRQMGVIKQPGCSWIS 635
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 134/262 (51%), Gaps = 10/262 (3%)
Query: 106 FSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
F+ +L+ C + S+ EA + R+ + + + +V Y CG ++
Sbjct: 22 FAKLLDTCVKSKSVFEARLV----------HARIIKTQFSSEIFIQNRLVDVYGKCGFLE 71
Query: 166 AAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
A++ +D M ++N+ +W A++ K G + EA +F + E D W AM + Q
Sbjct: 72 DARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDR 131
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
+ A+ M E+ ++E + A+SAC L D+ + + + + Y+ +A
Sbjct: 132 FEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSA 191
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ M+SKC + A R F + ++++S++S+IT + +G + +AL++F++M N GIEP+
Sbjct: 192 LVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPD 251
Query: 346 QVTFIGVLTACSHGGLVEDGCK 367
++T V +AC+ + +G +
Sbjct: 252 EITLASVASACASLSAIREGLQ 273
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 250/441 (56%), Gaps = 17/441 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+++AR++FD+ P + W +LI +V R+++ L+ ++ G N
Sbjct: 172 MAFARRLFDESP-VRDVVSWNTLIGGYVRSGLPREALELFWRLAEDG------------N 218
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS----WSAMVAGYANCGNMKAA 167
A + + G ++G ++ +RL + + + V +A++ Y CG+++ A
Sbjct: 219 AVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELA 278
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
++R++ + +V+W MI G+ + G + +A+ +FDE+ E D W A+ YVQN K
Sbjct: 279 NSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGK 338
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
AI ++ M++ V +E+ MV +SAC+QLG +EM + ++D + + +L+
Sbjct: 339 EAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLV 398
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M++KCG + A F+ I ++ ++++SMI A+HG + EA++ F +M + G++P+++
Sbjct: 399 DMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEI 458
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TFIGVL+AC H GLVE G + F LM + ++ +H +CM+DLLGR+G L++A L+
Sbjct: 459 TFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNA 518
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
DA WGAL AC++H N LGE AA L+EL P +G LLAN+YA K +
Sbjct: 519 MPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKA 578
Query: 468 EIVKMMISETEKKKSPGCSWI 488
+ V++M+ +K PGCS I
Sbjct: 579 DKVRVMMRHLGVEKVPGCSCI 599
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 16/251 (6%)
Query: 206 SEPDAS-----CWAAMTVCYVQNGYAKAAIEMYK-VMRQENVRISEVAMVGAISACTQLG 259
S PD++ + A+++C Q+ + + +Y+ ++ + R + I AC +L
Sbjct: 76 SPPDSAFPYNAAFRALSLCPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQ 135
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
A + HV + +V NA +H S G + A R F +DV+S++++I
Sbjct: 136 YRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIG 195
Query: 320 AFADHGKSQEALDMFLKMRNEG--IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
+ G +EAL++F ++ +G + P++VT IG ++ C+ G +E G + E + G
Sbjct: 196 GYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNK-G 254
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA- 436
++ + ++D+ + G LE A+S+ + A +W ++ +A LG +
Sbjct: 255 VRCTVRLMNAVMDMYVKCGSLELANSVFERISNRT-AVSWTTMIVG-----HARLGMMED 308
Query: 437 ARHLLELGPEK 447
AR L + PE+
Sbjct: 309 ARMLFDEMPER 319
>gi|18481717|gb|AAL73539.1|AF466200_18 hypothetical protein S250_18C08.29 [Sorghum bicolor]
Length = 679
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 256/460 (55%), Gaps = 26/460 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR++F+ +P+ + WTS+IR +V H +R +LL+ M R GV + T S VL+
Sbjct: 214 VSEARRLFEAMPE-RNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLD 272
Query: 112 ACARVP---------------------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
CA+ L +++I Y++ G M DA+ LF M +++++S
Sbjct: 273 GCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVS 332
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
W++++ GY ++ A + M EK++++W +M+ G+ G +RE+ ++F+++ D
Sbjct: 333 WNSLITGYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDE 392
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
WAA+ V NG +A+ + M QE R + VA +SA L + +
Sbjct: 393 IAWAAVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAY 452
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ V +L+ M++KCG L A R FS I + +I+ +SMITAFA HG +++A
Sbjct: 453 AVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDA 512
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
+F +M+ +G PN VTF+G+LTAC+ GLV+ G FE M V+GI+P +H TCMVD
Sbjct: 513 FKLFNRMQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVD 572
Query: 391 LLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKT 448
LLGR+G L +A + M KD+ DA W ALL + +H N +L ++AA+ LLE+ P
Sbjct: 573 LLGRAGFLNEALEMTNSMPQKDYPDA--WKALLSSSSLHSNLDLAKLAAQRLLEIDPYDA 630
Query: 449 GNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L+N+++S G +D E+VK+ KSPG S I
Sbjct: 631 TAYTVLSNMFSSAGMKEDEEMVKVAQLSNMASKSPGYSLI 670
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 163/331 (49%), Gaps = 18/331 (5%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
L A++ Y + G + DAQ+LFD M R+VISW+A++ YA+ GN+ +A+ +D M +N+
Sbjct: 44 LNALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNA 103
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W A+++ Y + G A +F + +A + A+ + G + A +Y M
Sbjct: 104 ASWNALVSLYLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPR 163
Query: 240 -NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+ AM+ +LG +A V +G R +A++ K G +
Sbjct: 164 WRDPVGSNAMIWGYLRGGELG-------MALRVFDGMAARDVISWSAMVDGLCKYGTVSE 216
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A R F + ++V+S++SMI + HG ++ L +FL MR EG++ N +T VL C+
Sbjct: 217 ARRLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQ 276
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--IMDYKDFCDAGT 416
LV++G + LM R+ G ++ + R G + A SL M+ KD +
Sbjct: 277 ASLVDEGSQVHCLMIRM-GFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIV---S 332
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEK 447
W +L+ +V ++ E A L +L PEK
Sbjct: 333 WNSLITG---YVQNDMIE-DAHVLFKLMPEK 359
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 154/340 (45%), Gaps = 57/340 (16%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLI-------RNHVLHAHFRQSILLYAKMHRLGVLTSG 103
NL+ AR VFD +P + W +L+ R HA F ++ A + G + +G
Sbjct: 87 NLASARFVFDDMP-LRNAASWNALVSLYLRAGRPAAAHALFCKAPAKNAVSY--GAIITG 143
Query: 104 FTFSSVLNACA----------RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L R P A+I GY + G + A R+FD MA R+VISWSA
Sbjct: 144 LARAGMLREAQAVYWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSA 203
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
MV G G + A+ ++ M E+N V+W +MI GY K G R+ +F +
Sbjct: 204 MVDGLCKYGTVSEARRLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLD--------- 254
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV-EMAAILAKHVD 272
MR+E V+++ + + + C Q V E + + +
Sbjct: 255 ----------------------MRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIR 292
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
G + ++ ++LI M+S+ G + A FS + KD++S++S+IT + + ++A
Sbjct: 293 MGFAEDI-FLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHV 351
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+F M E + +++ ++ ++ G + + + FE M
Sbjct: 352 LFKLMP----EKDAISWTSMVVGFANRGWMRESVELFEQM 387
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 269/548 (49%), Gaps = 76/548 (13%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLS---YARQVFDQI 62
L+ S L Q+H+ L+ + + + FL+ L NL YAR++FD+
Sbjct: 62 LIDNSTHKRHLDQIHNRLVISGLQ-------HNGFLMTKLVNGSSNLGQICYARKLFDEF 114
Query: 63 PKCKTQ-FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-L 120
C F+W ++IR++ + +R ++ +Y M GV GFTF VL AC + L
Sbjct: 115 --CYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGL 172
Query: 121 EAVICG--------------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
+I G Y K G + A+ +FD + R ++SW+++++GYA
Sbjct: 173 SCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQ 232
Query: 161 CGNMKAAKEFYDRMTEKNSVT--WVAMI-------------------------------- 186
G A + +M N V W+A++
Sbjct: 233 NGKAVEALRMFSQM-RNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291
Query: 187 ------AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
A Y KCG V AK FD++ + W AM Y +NG+A+ A+ ++ M N
Sbjct: 292 LLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN 351
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
++ V + A+ A Q+G +E+A + +V + +V+ +LI M++KCG ++ A
Sbjct: 352 IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFAR 411
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
R F R +KDV+ +S+MI + HG+ EA++++ M+ G+ PN VTFIG+LTAC+H G
Sbjct: 412 RVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSG 471
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LV++G + F M + F I P EH +C+VDLLGR+G L +A + IM WGAL
Sbjct: 472 LVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGAL 530
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L ACK++ LGE AA L L P TG+ L+N+YAS W V++++ E
Sbjct: 531 LSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLN 590
Query: 481 KSPGCSWI 488
K G S I
Sbjct: 591 KDLGYSVI 598
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 256/487 (52%), Gaps = 37/487 (7%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ K Q+ +H+ +++T HDQ + LIR+ D++ YA VF +
Sbjct: 35 LLRNCKNNAQVPSIHAKIIRTF---HDQDAFVVFELIRVCSTL-DSIDYAYDVFRYVSNP 90
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
+L+T++I V + LY +M VL + +SVL AC
Sbjct: 91 NV-YLYTAMIDGFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVLKACG----------- 138
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSA----MVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+D+ + + + + S + ++ Y G + AK+ +D M +++ V
Sbjct: 139 -------LDECREIHSQVLKLGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQVV 191
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
MI Y +CG ++EA ++F ++ D CW AM V+N A+E+++ M+
Sbjct: 192 ATVMINCYSECGCIKEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQ---- 247
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+S + I G A + V+ + +N+V NALI+M+S+CG +++A R
Sbjct: 248 -LSVFYLPARIWVRWSSG-----AGVHSFVENQKMELSNFVGNALINMYSRCGDINVAKR 301
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F +++KDVISY++MI+ A HG S EA+++F M N G PNQVT + +L ACSHGGL
Sbjct: 302 VFKGMRDKDVISYNTMISGLAMHGASVEAINVFRDMVNRGFRPNQVTLVALLNACSHGGL 361
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
++ G + F M RVF ++P EH C+VDLLGR G+LE+A+ I + D GALL
Sbjct: 362 LDIGLEVFNSMWRVFSVEPQIEHYGCIVDLLGRVGRLEEAYRFIENMLIEPDHIMLGALL 421
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
ACK+H N ELGE A+ L E +G LL++IYAS GKWK+S ++ + E+ +K
Sbjct: 422 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSHIYASSGKWKESTEIRESMRESGIEK 481
Query: 482 SPGCSWI 488
PGCS I
Sbjct: 482 EPGCSTI 488
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 263/493 (53%), Gaps = 28/493 (5%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
+L+ K+F Q+KQVH+ L+ T H L++ L +SYA VFD P+
Sbjct: 6 FLLSSCKSFRQIKQVHARLITTGLILHP---IPTNKLLKQLSSIFAPISYAHMVFDHFPQ 62
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL----GVLTSGFTFSSVLNACARVPSLL 120
FL+ ++I+ VL S + K L ++ + ++F+ C +L
Sbjct: 63 -PDLFLYNTIIK--VLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVL 119
Query: 121 EA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
E V K+GL E N+ +A++ Y N + A++ +D ++
Sbjct: 120 EGEQVRVHAIKLGL------------ENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRD 167
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
+W M++GY + G++ EA+++FDE+ E D W M +Q GY A++++ M
Sbjct: 168 MYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLA 227
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+ + +E + +++AC L ++ + ++ + + LI M++KCG L+
Sbjct: 228 KGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEF 287
Query: 299 AWREFS---RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
A + F+ R+K K V +++MI FA HGKS+EA+++F +M+ E + PN+VTF+ +L A
Sbjct: 288 ASKLFNSNPRLKRK-VWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNA 346
Query: 356 CSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
CSHG VE+G FE M + +KP EH C+VDLLGR+G+L++A +I D
Sbjct: 347 CSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVA 406
Query: 416 TWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMIS 475
WGALL ACK+H +AE+GE + + EL P G LLANIY+ G W ++ ++ I+
Sbjct: 407 IWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIA 466
Query: 476 ETEKKKSPGCSWI 488
E+ KKK+PGCS I
Sbjct: 467 ESGKKKTPGCSSI 479
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 255/474 (53%), Gaps = 18/474 (3%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H +++ L PH Y A ++ L G A++VF + + + WT LI
Sbjct: 311 KQLHVQVIRNL--PHID-PYVASAMVELYAKCG-CFKEAKRVFSSL-RDRNSVSWTVLIG 365
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ + F +S+ L+ +M + F +++++ C C I L
Sbjct: 366 GFLQYGCFSESVELFNQMRAELMAVDQFALATLISGC-----------CNTMDICLGSQL 414
Query: 137 QRL-FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
L S R V+ +++++ YA CGN++ A+ ++ M E++ V+W MI Y + G +
Sbjct: 415 HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNI 474
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE-VAMVGAISA 254
+A++ FD++S + W AM Y+Q+G + ++MY M E I + V V
Sbjct: 475 AKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRG 534
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C +G ++ + H + V NA+I M+SKCG + A + F + KD++S+
Sbjct: 535 CADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSW 594
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
++MIT ++ HG ++A+++F + N+G +P+ ++++ VL+ CSH GLVE+G F++M R
Sbjct: 595 NAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKR 654
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
I P EH +CMVDLLGR+G L +A +LI + A WGALL ACK H N +L E
Sbjct: 655 DHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAE 714
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+AA+HL +L +G LLA +YA GK DS V+ ++ + KKSPG SW+
Sbjct: 715 LAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWM 768
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 181/395 (45%), Gaps = 22/395 (5%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSV 109
+LS A ++F ++P + W +++ + F ++ ++ M + G L + FTF V
Sbjct: 107 SLSDAVELFGRMPT-RDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCV 165
Query: 110 LNACARVPSLLEAVICGYTKIGL-MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
+ +C + G+ ++ L + FDS + +V +A+V CG M A
Sbjct: 166 MKSCGAL---------GWHEVALQLLGLLSKFDSQDDPDV--QTALVDMLVRCGAMDFAS 214
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+ + R+ + +M+ GY K V A ++F + E D W + ++G +
Sbjct: 215 KQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVRE 274
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A++M M + VR +++AC +L +E L V YV++A++
Sbjct: 275 ALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVE 334
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
+++KCG A R FS +++++ +S++ +I F +G E++++F +MR E + +Q
Sbjct: 335 LYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFA 394
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
+++ C + + G + L + + + ++ + + G L+ A LI ++
Sbjct: 395 LATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVS-NSLISMYAKCGNLQNAE-LIFNF 452
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIA-ARHLLE 442
D +W ++ A +++G IA AR +
Sbjct: 453 MAERDIVSWTGMITA-----YSQVGNIAKAREFFD 482
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 150/345 (43%), Gaps = 70/345 (20%)
Query: 114 ARVPSLLEAVICGYTKIGLMDDAQRLF-DSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
A V L ++ Y G + DA+ L D + E NVI+ + M+ GYA G++ A E +
Sbjct: 57 ASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFG 116
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
RM ++ +W +++G Y Q+G A+++
Sbjct: 117 RMPTRDVASWNTIMSG-------------------------------YYQSGQFLNALDI 145
Query: 233 YKVMRQENVRISEVAMVGAI-SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+ MRQ + G + +C LG E+A L + + V AL+ M
Sbjct: 146 FVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLV 205
Query: 292 KCGYLDLAWREFSRIKN-------------------------------KDVISYSSMITA 320
+CG +D A ++FSRIKN +DV+S++ +I+A
Sbjct: 206 RCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISA 265
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF--ELMTRVFGI 378
+ G+ +EALDM + M +G+ P+ T+ LTAC+ +E G KQ +++ + I
Sbjct: 266 LSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWG-KQLHVQVIRNLPHI 324
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
P + MV+L + G ++A + +D ++ +W L+G
Sbjct: 325 DPYVA--SAMVELYAKCGCFKEAKRVFSSLRDR-NSVSWTVLIGG 366
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 260/536 (48%), Gaps = 98/536 (18%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D L YA VF+ IP+ Q +W + R H L + ++ LY M LG+L + FTF +
Sbjct: 23 DGLPYAISVFETIPE-PNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFL 81
Query: 110 LNACARVPSLLE------------------------------------------------ 121
L +CA+ + E
Sbjct: 82 LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141
Query: 122 ----AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
A+I GY G ++ AQ++FD + ++V+SW+AM++GYA GN K A E + M +
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201
Query: 178 N-------------------SV-------TWV-------------AMIAGYGKCGEVREA 198
N S+ +W+ A+I Y KCGEV A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
++ + +S D W + Y K A+ +++ M + ++V M+ + AC L
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321
Query: 259 GDVEMAAILAKHVDEG----CCDRTNYVSNALIHMHSKCGYLDLAWR-EFSRIKNKDVIS 313
G +++ + ++D+ + + +LI M++KCG +D A + S N+ + +
Sbjct: 322 GAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
+++MI FA HG++ A D+F +MR GIEP+ +TF+G+L+ACSH G+++ G F M
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMR 441
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
+ + I P EH CM+DLLG SG ++A +I D W +LL ACK+H N ELG
Sbjct: 442 QDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELG 501
Query: 434 EIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE-KKKSPGCSWI 488
E A+ L+++ PE G+ LL+NIYA+ GKW + ++ ++++ KKK PGCS I
Sbjct: 502 ESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSI 557
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 273/537 (50%), Gaps = 69/537 (12%)
Query: 14 NQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQL-PGDNLSYARQVFDQIPKCKTQFL 70
+QLKQ+H+ +L+T P + A ++ L +L YAR VF QIP T +
Sbjct: 2 SQLKQIHAQMLRTGLFFDP-----FTASKIVAFCSLQESGSLQYARLVFSQIPN-PTSYT 55
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
S+IR ++++L Y +M G++ +TF S+ +C R S + + C TK+
Sbjct: 56 CNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC-RNSSEGKQIHCHSTKL 114
Query: 131 GLMDD-------------------AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
G D A+++FD M ++ V+SW+ M+ +A A +
Sbjct: 115 GFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLF 174
Query: 172 DRM-----TEKNSVTWVAMIA---------------------GYG--------------K 191
DRM + N VT V ++ G+G K
Sbjct: 175 DRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCK 234
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG V+ A+ +FD+ E + W M +V++ + A+ +++ M+ + ++ +V M
Sbjct: 235 CGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASL 294
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ ACT LG +E+ L ++ + D + AL+ M++KCG ++ A + F + KDV
Sbjct: 295 LLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDV 354
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
++++++I A G+++ AL F +M +G++P+ +TF+GVL ACSH G V++G F
Sbjct: 355 MTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNS 414
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M+ +GI+P EH +VD+LGR+G++ +A LI D G LLGAC++H N E
Sbjct: 415 MSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLE 474
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E AA+ LLE+ P +G LL+NIY S KW++++ + +++E +K PGCS I
Sbjct: 475 AAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQI 531
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 282/576 (48%), Gaps = 105/576 (18%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPKCKTQF 69
+ L+ +H+ ++KT H+ + ++ + + P D L YA VF+ I +
Sbjct: 1 QILQSLRMIHAQMIKT--GLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQE-PNLL 57
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------- 121
+W ++ R H L + ++ LY M LG+L + +TF +L +CA+ + E
Sbjct: 58 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHV 117
Query: 122 --------------------------------------------AVICGYTKIGLMDDAQ 137
A+I GY G +++AQ
Sbjct: 118 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQ 177
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN------------------- 178
++FD + ++V+SW+AM++GYA GN K A E + M + N
Sbjct: 178 KMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 237
Query: 179 SV-------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
S+ +W+ A+I Y KCGE+ A +F+ + D W +
Sbjct: 238 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIG 297
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
Y K A+ +++ M + ++V M+ + AC LG +++ + ++D+ R
Sbjct: 298 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK----R 353
Query: 279 TNYVSNA------LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
V+NA LI M++KCG ++ A + F+ I +K + S+++MI FA HG++ + D
Sbjct: 354 LKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 413
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F +MR GIEP+ +TF+G+L+ACSH G+++ G F MT+ + + P EH CM+DLL
Sbjct: 414 IFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLL 473
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
G SG ++A +I + D W +LL ACK+H N ELGE A++L+++ PE G+
Sbjct: 474 GHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYV 533
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYA+ G+W + + ++++ KK PGCS I
Sbjct: 534 LLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSI 569
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 247/461 (53%), Gaps = 26/461 (5%)
Query: 32 DQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK---CKTQFLWTSLIRNHVLHAHFRQSI 88
D + Y FLI+ L G ++ R V + K + F+ +LI + + F +
Sbjct: 435 DSFTY--SFLIKALSAAG--VAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDAR 490
Query: 89 LLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNV 148
++ +M V++ +++ + A R E + G K LFD M E++
Sbjct: 491 KVFDEMPERDVVS----WNTAMAAMVR-----EGELAGVRK---------LFDEMPEKDT 532
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP 208
+SW+ ++ GY G ++AA E + RM E+N V+W M++GY K G++ A+ +FD++
Sbjct: 533 VSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSK 592
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
+ W M Q G A +++ M++ +V + A+V ++AC + G + + +
Sbjct: 593 NLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIH 652
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF-SRIKNKDVISYSSMITAFADHGKS 327
++V + R+ +V NALI M KCG ++ A F + KD +S++S+I FA HG
Sbjct: 653 RYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHG 712
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+AL++F +M+ +G P+ VT I VL+AC+H G V++G + F M R +GI P EH C
Sbjct: 713 DKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGC 772
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
M+DLLGR G +++A LI + WG+LL AC++H N E EIA L +L P
Sbjct: 773 MIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSN 832
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
GN A+L+NIYA G+W D +M + T +K+ G SW+
Sbjct: 833 AGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWV 873
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 264/487 (54%), Gaps = 25/487 (5%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
TF L + H ++ Q Y A ++ + G ++A +VF +P L
Sbjct: 22 TFRDLLRAHGLAVRLCLS---QSSYVATQIVHVCNGHG-RAAHAARVFAHVPAPNLH-LH 76
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRL-------GVLTSG--FTFSSVLNACARVPSLLEA 122
++I+ + + R ++ +Y +M R G + G FT+ +L AC + +
Sbjct: 77 NAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAA---- 132
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
+++G A + S E + I ++++ Y CG++ A++ +D M EK++V+W
Sbjct: 133 -----SQLGRQVHAH-VARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSW 186
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
+I+ + + G++R+A+++F + + W A+ Y G A+E+++ M+ E
Sbjct: 187 NTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFE 246
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+V++V + AC QLG +E+ + + ++ Y+ NAL+ M++KCG ++ A +
Sbjct: 247 PDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQL 306
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGL 361
F + KDVIS+S+ I A HG+++EA+ +F M EG + PN +TF+G+L+ACSH GL
Sbjct: 307 FHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGL 366
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+++G + F+ M +G++P EH C+VDLLGRSG++++A I D WG+LL
Sbjct: 367 LDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLL 426
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
AC+ H + + +AA L+EL PE GN +LAN+YA+ G+W + + I +K
Sbjct: 427 SACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTRK 486
Query: 482 SPGCSWI 488
+PGCS I
Sbjct: 487 TPGCSMI 493
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/484 (31%), Positives = 256/484 (52%), Gaps = 31/484 (6%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
Y+A L+ G LS AR++FD+IP + W L + +++ +++M
Sbjct: 839 YFAAKLMSFYTECG-QLSNARKLFDKIPNTNIR-RWIVLTGACARRGFYEEALSAFSEMQ 896
Query: 96 RLGVLTSGFTFSSVLNACARVPS---------------------LLEAVICGYTKIGLMD 134
+ G+ + F S+L AC + ++ A+I Y+K G ++
Sbjct: 897 KEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVE 956
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYG 190
A R+FD + +++++ +AMV+GYA G + A + +M + N V+W +IAG+
Sbjct: 957 KACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFS 1016
Query: 191 KCGEVREAKKVFDEIS----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
+ G+ +VF ++ EPD W ++ +VQN + + +K M + S V
Sbjct: 1017 QVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSV 1076
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+ + ACT + ++ + + ++ YV +AL+ M++KCGY+ A F +
Sbjct: 1077 TISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMM 1136
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
++ ++++S+I +A+HG EA+++F +M + + +TF VL ACSH G+VE G
Sbjct: 1137 PERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGE 1196
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
F M + I+P EH CMVDLLGR+G+L +A+ LI D WGALLGAC+
Sbjct: 1197 SLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRN 1256
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H N EL E+AA HL EL PE G+S LL+N+YA G+W ++ +K M+ + + K PGCS
Sbjct: 1257 HGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCS 1316
Query: 487 WISS 490
WI +
Sbjct: 1317 WIEA 1320
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 239/476 (50%), Gaps = 61/476 (12%)
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE------------ 121
LI + + F Q+ ++ ++ +G + +T+S++L C + ++ E
Sbjct: 185 LISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQ 244
Query: 122 ---------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
A++ Y+K G+M++A+ +F+S+ +RN+ISW+A + G+ G+ K A + +
Sbjct: 245 YLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFS 304
Query: 173 RM----TEKNSVTW-----------------------------------VAMIAGYGKCG 193
M E N T+ A+I Y G
Sbjct: 305 MMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLG 364
Query: 194 EVREAKKVFDEISEPDASC-WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
E+ EA+K F ++ ++ W A+ YV N + A+E + M +E+V +E
Sbjct: 365 EMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIF 424
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
AC+ + + + + + +V+++LI +++CG L+ A + F++I + DV+
Sbjct: 425 KACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVV 484
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++S+I A++ +G +A+ + KM EG +P TF+ VL+ACSH GLV++G + F+ M
Sbjct: 485 SWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSM 544
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+ + I+P H +CMVD+LGR+GQLE A I A W LL AC+ + N ++
Sbjct: 545 VQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQM 604
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E A +L+L P L+N+YA +G+W D+E + ++ + E K PGCSWI
Sbjct: 605 AEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWI 660
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 15/248 (6%)
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
++I Y KCGEV A +V+D+++ DA+ + Y +NG+ A +++ + R
Sbjct: 152 TSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTR 211
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+ ++ C + ++ L HV + V NAL+ ++SKCG ++ A
Sbjct: 212 PNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIV 271
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F ++ +++IS+++ I F HG ++AL F MR GIEPN+ TF VL +C
Sbjct: 272 FESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC------ 325
Query: 363 EDGCKQFELMTRVFGIKPLTEHL-------TCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
GC + + R+F + + + + T ++D+ G++++A
Sbjct: 326 --GCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNV 383
Query: 416 TWGALLGA 423
+W AL+
Sbjct: 384 SWNALIAG 391
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 192/487 (39%), Gaps = 116/487 (23%)
Query: 76 RNHVLHAHFRQSILLYAK----MHRLGVLTSGFTFSS--VLNACARVPSLLEAVICGYTK 129
RN H F+ S YAK R L G + V+ AR+ ++ YT+
Sbjct: 791 RNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTE 850
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN-------------------------- 163
G + +A++LFD + N+ W + A G
Sbjct: 851 CGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSI 910
Query: 164 MKAAKEFYDRMTEKNSVTWV-------------AMIAGYGKCGEVREAKKVFDEISEPDA 210
+KA DR T +N T + A+I Y KCG V +A +VFD I + D
Sbjct: 911 LKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDL 970
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
AM Y Q+G+ A+++ + M+Q V+ + V+ I+ +Q+GD M + + +
Sbjct: 971 VVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRL 1030
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ +N + DV+S++S+I+ F + + E
Sbjct: 1031 M----------TANGV---------------------EPDVVSWTSVISGFVQNFHNHEG 1059
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
D F +M ++G P+ VT +L AC++ + G K+ V G++ + +VD
Sbjct: 1060 FDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHG-KEIHGYAMVIGVEKDVYVRSALVD 1118
Query: 391 LLGRSGQLEKA---------------HSLIMDYKD--FCDAG-----------------T 416
+ + G + +A +SLI Y + +C+ T
Sbjct: 1119 MYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLT 1178
Query: 417 WGALLGACKVHVNAELGEIAARHLLE---LGPEKTGNSALLANIYASMGKWKDS-EIVKM 472
+ A+L AC ELGE + E + P + + A + ++ GK ++ +++K
Sbjct: 1179 FTAVLNACSHAGMVELGESLFXKMQEKYRIEP-RLEHYACMVDLLGRAGKLSEAYDLIKA 1237
Query: 473 MISETEK 479
M E +K
Sbjct: 1238 MPVEPDK 1244
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 158/371 (42%), Gaps = 50/371 (13%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTW 182
Y K G +D A R++D M + + + +++ YA G A + + ++ T N T+
Sbjct: 158 YAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTY 217
Query: 183 VAMIAG-----------------------------------YGKCGEVREAKKVFDEISE 207
M+A Y KCG + EA+ VF+ + +
Sbjct: 218 STMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQ 277
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
+ W A + Q+G K A++ + +MR+ + +E +++C + D +
Sbjct: 278 RNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMF 337
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI-KNKDVISYSSMITAFADHGK 326
V + +V A+I M+S G +D A ++F ++ + +S++++I + + K
Sbjct: 338 HTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEK 397
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE--- 383
++A++ F +M E + N+ T+ + ACS ++ +R+ IK E
Sbjct: 398 IEKAMEAFCRMVKEDVACNEFTYSNIFKACSS---FPSLATTVQIHSRL--IKSNVESNL 452
Query: 384 HL-TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
H+ + +++ + G LE A + D D +W +++ A + + R ++E
Sbjct: 453 HVASSLIEAYTQCGSLENAVQVFTQISD-ADVVSWNSIIKAYSQNGDPWKAIFLLRKMIE 511
Query: 443 LGPEKTGNSAL 453
G + T + L
Sbjct: 512 EGNKPTSXTFL 522
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 63/254 (24%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------- 121
WT+ I H F++++ ++ M G+ + FTFS VL +C V ++
Sbjct: 283 WTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVI 342
Query: 122 ------------AVICGYTKIGLMDDAQRLFDSM--AERNVISWSAMVAGYANCGNMKAA 167
A+I Y+ +G MD+A++ F M A NV SW+A++AGY ++ A
Sbjct: 343 KKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNV-SWNALIAGYVLNEKIEKA 401
Query: 168 KEFYDRMTEK----NSVTW-----------------------------------VAMIAG 188
E + RM ++ N T+ ++I
Sbjct: 402 MEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEA 461
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y +CG + A +VF +IS+ D W ++ Y QNG AI + + M +E + +
Sbjct: 462 YTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTF 521
Query: 249 VGAISACTQLGDVE 262
+ +SAC+ G V+
Sbjct: 522 LTVLSACSHSGLVQ 535
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 93/189 (49%), Gaps = 14/189 (7%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A + F Q+ + + W +LI +VL+ +++ + +M + V + FT+S++ AC+
Sbjct: 369 AEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACS 428
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
PSL V RL S E N+ S+++ Y CG+++ A + + ++
Sbjct: 429 SFPSLATTV----------QIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQI 478
Query: 175 TEKNSVTWVAMIAGYGKCGEVREA----KKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++ + V+W ++I Y + G+ +A +K+ +E ++P + + + +G +
Sbjct: 479 SDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQ 538
Query: 231 EMYKVMRQE 239
E +K M Q+
Sbjct: 539 EFFKSMVQD 547
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
A+S C + G VE+ V + +V +LI M++KCG +D A R + ++ + D
Sbjct: 119 ALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLD 178
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+ + +I+A+A +G +A +F+++ N G PN T+ +L C +++G KQ
Sbjct: 179 AATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEG-KQ-- 235
Query: 371 LMTRVFGIKPLTEHL--TCMVDLLGRSGQLEKA 401
L V ++ L+E ++ L + G +E+A
Sbjct: 236 LHAHVVKMQYLSETAVGNALLTLYSKCGMMEEA 268
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 218/406 (53%), Gaps = 38/406 (9%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK- 177
L+ +I Y K GL+ DAQ +FD M +RNV+SW+ M++ Y+ A EF M +
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 178 ---NSVTWV--------------------------------AMIAGYGKCGEVREAKKVF 202
N T+ A+I Y + GE+ A +VF
Sbjct: 62 VRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVF 121
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
DE+ D W+++ + QN A+ ++K M++ + + + ACT L +E
Sbjct: 122 DEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLE 181
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
+ + HV + D+ ++NAL+ M+ KCG L+ A F R+ KDVIS+S+MI A
Sbjct: 182 LGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLA 239
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
+G S+EAL +F M+ GI+PN VT +GVL ACSH GLVE+G F M +FGI P
Sbjct: 240 QNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGR 299
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
EH CM+DLLGR+G+L +A LI + + DA TW ALL AC+VH N ++ AA+ +L
Sbjct: 300 EHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILR 359
Query: 443 LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L P+ G LL+NIYA+ +W D V+ ++ KK PGCSWI
Sbjct: 360 LDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWI 405
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 89/357 (24%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A+ VFD++P + WT++I + +++ M R GV + FT+SSVL AC
Sbjct: 19 AQDVFDKMPD-RNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACD 77
Query: 115 RVPSLLE------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
+ +L + A+I Y++ G +++A R+FD M +++ WS+++A
Sbjct: 78 GLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIA 137
Query: 157 GYANCGNMKAAKEFYDRM------TEKNSVTWV--------------------------- 183
G+A + A + RM ++ ++T V
Sbjct: 138 GFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQDL 197
Query: 184 ----AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
A++ Y KCG + +A VF + E D W+ M QNGY+K A+++++ M+
Sbjct: 198 ILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVL 257
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
++ + V +VG + AC+ G VE EG L + HS
Sbjct: 258 GIKPNYVTIVGVLFACSHAGLVE----------EG-----------LYYFHSM------- 289
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
+E I + Y MI G+ EA+D+ +M EP+ VT+ +L AC
Sbjct: 290 -KELFGI-DPGREHYGCMIDLLGRAGRLSEAVDLINEME---CEPDAVTWRALLNAC 341
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 34/249 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A +VFD++ +W+S+I ++ +++ L+ +M R G L T +SVL
Sbjct: 114 LENALRVFDEMVTGDL-VVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLR 172
Query: 112 ACARVPSLLE--------------------AVICGYTKIGLMDDAQRLFDSMAERNVISW 151
AC + +LLE A++ Y K G ++DA +F M E++VISW
Sbjct: 173 ACTGL-ALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISW 231
Query: 152 SAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
S M+AG A G K A + ++ M + N VT V ++ G V E F + E
Sbjct: 232 STMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKE 291
Query: 208 -----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
P + M + G A+++ M E ++ A+ ++AC +V+
Sbjct: 292 LFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRAL---LNACRVHRNVD 348
Query: 263 MAAILAKHV 271
+A AK +
Sbjct: 349 VAIHAAKQI 357
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 39/232 (16%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
++ N LI+M+ K G L A F ++ +++V+S+++MI+A++ + +AL+ + M E
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
G+ PN T+ VL AC GL +Q G+ + ++D+ R G+LE
Sbjct: 61 GVRPNMFTYSSVLRACD--GLF--NLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116
Query: 401 A---------------HSLIMDYKDFCDAG-------------------TWGALLGACKV 426
A S+I + D T ++L AC
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ELG H+L+ + N+ALL ++Y G +D+ V + + E +
Sbjct: 177 LALLELGRQVHVHVLKYDQDLILNNALL-DMYCKCGSLEDANAVFVRMVEKD 227
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 262/494 (53%), Gaps = 27/494 (5%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL----PGDNLSYARQVFD 60
Y+ + + K +H++ +T H +A L +L + P +LSYA +FD
Sbjct: 12 YMAEKCISMRNFKLIHAHAFRTCL------HQHAVVLGKLFRFAAVSPFGDLSYAHNMFD 65
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
Q+P+ T F + +LIR H S L + +M R + F+F+ +L + + L+
Sbjct: 66 QMPQ-PTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKSRSFTMPLV 124
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG-NMKAAKEFYDRMT---E 176
+ K G R++ +A++ YA G + A K F D + +
Sbjct: 125 HDIHGAVFKFGFC------------RHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLD 172
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
+ V+W ++ + K GE+ A+KVFD + E D W M Y + +++++ M
Sbjct: 173 VDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEM 232
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
R V EV ++ ISAC +LGD EM ++ K V+E + N+LI M+ KCG L
Sbjct: 233 RLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCL 292
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
+ AW+ F R K K +I++++M+ A+HG +++A +F M G+ P+ VT + +L A
Sbjct: 293 EEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAY 352
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
+H G V++G + FE M R +G++P EH +VD+LGRSG+L++A++L+ +
Sbjct: 353 AHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVI 412
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
WGALLGAC++H + +GE + LLEL P++ G LL +IY + G+ ++ ++ +
Sbjct: 413 WGALLGACRIHGDVGMGERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLA 472
Query: 477 TEKKKSPGCSWISS 490
+ +K+PGCSW+ +
Sbjct: 473 SGARKNPGCSWVEA 486
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 250/444 (56%), Gaps = 21/444 (4%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG--VLTSGFTFSS 108
++ AR++FD+ P + W +LI +V R+++ L+ ++ G V T
Sbjct: 171 SMVLARRLFDESP-ARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIG 229
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRL---FDSMAERNVISW-SAMVAGYANCGNM 164
++ CA ++G ++ +RL DS R + +A++ Y CG++
Sbjct: 230 AVSGCA--------------QMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSL 275
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
+ AK ++R+ K V+W MI G+ + G + +A+ +FDE+ E D W A+ YVQN
Sbjct: 276 ELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNK 335
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN 284
K AI ++ M++ V +E+ MV +SAC+QLG +EM + ++D + +
Sbjct: 336 QGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGT 395
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
+L+ M++KCG + A F I +K+ +++++MI A+HG + EA++ F +M + G++P
Sbjct: 396 SLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQP 455
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
+++TFIGVL+AC H GLV++G + F LM + ++ +H +CM+DLLGR+G L++A L
Sbjct: 456 DEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQL 515
Query: 405 IMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKW 464
+ DA WGAL AC++H N LGE AA L+EL P +G LLAN+YA
Sbjct: 516 VNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMR 575
Query: 465 KDSEIVKMMISETEKKKSPGCSWI 488
K ++ V++M+ +K PGCS I
Sbjct: 576 KKADKVRVMMRHLGVEKVPGCSCI 599
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 118/246 (47%), Gaps = 11/246 (4%)
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR-QENVRISEVAMVGAISACTQLGDVEMA 264
+ P + + A+++C ++ + + +Y+ + + R + + AC +L
Sbjct: 81 ASPYNAAFRALSLCPHRHLVDRHCLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYG 140
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
A + HV + +V NA +H S G + LA R F +DV+S++++I +
Sbjct: 141 AAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRS 200
Query: 325 GKSQEALDMFLKMRNEG--IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
G +EAL++F ++ +G + P++VT IG ++ C+ G +E G + E + G++
Sbjct: 201 GLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSK-GVRCTV 259
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA-ARHLL 441
+ ++D+ + G LE A S + + D +W ++ +A LG + AR L
Sbjct: 260 RLMNAVMDMYVKCGSLELAKS-VFERIDNKTVVSWTTMIVG-----HARLGMMEDARMLF 313
Query: 442 ELGPEK 447
+ PE+
Sbjct: 314 DEMPER 319
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 245/441 (55%), Gaps = 24/441 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-----VLTSGFTFSSV 109
AR++FD++P+ + W L+ +V + + L+ +M + SGF S
Sbjct: 248 ARELFDRMPE-RNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGK 306
Query: 110 L----NACARVPS----LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
L + +++PS A++ GY K L+DDA++LFD + R+ + W+ M++GY C
Sbjct: 307 LQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQC 366
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
G + A + +M K+ ++W MIAG + G++R+A +F ++ + W ++ +V
Sbjct: 367 GMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFV 426
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
QNG A++ + +MR++ +SA L +++ RT +
Sbjct: 427 QNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQF-----HSLLVRTGF 481
Query: 282 VS-----NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+S NALI ++KCG + A + F + +D++S++++I +A +G E + +F +
Sbjct: 482 ISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFRE 541
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M + P+++T + VL+ACSH GL+++G F M +++ +KP+ EH TCMVDLLGR+G
Sbjct: 542 MEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAG 601
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
+L +A L+ + +AG WGALLGAC+VH N E+ +AA L EL P K N LL+N
Sbjct: 602 RLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSN 661
Query: 457 IYASMGKWKDSEIVKMMISET 477
I GKW D++ V++++ E+
Sbjct: 662 ICVEAGKWDDADKVRVLMKES 682
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 161/340 (47%), Gaps = 33/340 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR++ D++P K + ++I + + F +I L +M +++ ++SVL
Sbjct: 120 LTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVS----WNSVLG 175
Query: 112 ACARVPSLLEAV-----------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
R + +V + GY + G +D A F + NVISW +
Sbjct: 176 GLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNL 235
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
V GY G M A+E +DRM E+N V W +++GY + +V A +F E+ E ++ W
Sbjct: 236 VNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWT 295
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
M +V++G + A ++ M +NV M G + + + D A+ + +G
Sbjct: 296 TMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKS-NLIDD-------ARQLFDG 347
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
R N +I + +CG LD A F ++ NKD+IS+++MI A G+ ++A +F
Sbjct: 348 IVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIF 407
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
KM+ N V++ +++ GL + + F LM R
Sbjct: 408 RKMKRR----NTVSWNSIISGFVQNGLFVEALQHFMLMRR 443
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
+ G + A+RLF+ M RNV+S++AMV+ A+ G + A+ +D M +N V+W M+
Sbjct: 22 ARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMV 81
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE------NV 241
+ G V +A+ +FD + + W M CYV+ G A E+ M E N
Sbjct: 82 ACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNT 141
Query: 242 RISEVAMVGAI-SACTQLGDVEMAAILAKHVDEGCCDRTNYVS----------------- 283
IS A G A L ++ I++ + G R +S
Sbjct: 142 MISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSW 201
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
N ++ + + G LD+A FSRI + +VIS+ +++ + G+ EA ++F +M E
Sbjct: 202 NLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMP----E 257
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
N V + +L+ VE F M I T MV RSG+L++A
Sbjct: 258 RNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSIS-----WTTMVSGFVRSGKLQEAKD 312
Query: 404 LI 405
++
Sbjct: 313 VL 314
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 180/410 (43%), Gaps = 79/410 (19%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR++F+++P+ + + +++ H ++ L+ +M R + ++++++
Sbjct: 27 LAAARRLFEEMPR-RNVVSYNAMVSALAHHGRLAEARRLFDEMPR----RNPVSWNTMMV 81
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
AC ++ G ++DA+ LFD+M RN SW+ MV+ Y G + A+E
Sbjct: 82 AC--------------SQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELL 127
Query: 172 DRMT-EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
DRM EK + + MI+GY K G +A + E+ PD W ++ ++N ++
Sbjct: 128 DRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSV 187
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD-----------EGCC--- 276
+ + M +++ + + G + A GD+++A+ + G C
Sbjct: 188 QFFDEMPDKDLVSWNLMLEGYVRA----GDLDVASAFFSRIPSPNVISWVNLVNGYCQAG 243
Query: 277 -------------DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+R N L+ + + ++ A+ F + K+ IS+++M++ F
Sbjct: 244 RMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVR 303
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG----GLVEDGCKQFELMTRVFGIK 379
GK QEA D+ KM ++ +G TA HG L++D + F+ GI
Sbjct: 304 SGKLQEAKDVLSKMPSDN--------VGAKTALMHGYLKSNLIDDARQLFD------GI- 348
Query: 380 PLTEHLTC---MVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGAC 424
+ C M+ + G L++A L M KD +W ++ C
Sbjct: 349 -VVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMI---SWNTMIAGC 394
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+ SN + ++ G L A R F + ++V+SY++M++A A HG+ EA +F +M
Sbjct: 12 FRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRR 71
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQL 398
N V++ ++ ACS G VED F+ M P T MV R+G+L
Sbjct: 72 ----NPVSWNTMMVACSQHGRVEDARGLFDAM-------PARNEYSWTIMVSCYVRAGEL 120
Query: 399 EKAHSLI 405
A L+
Sbjct: 121 TLARELL 127
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 255/486 (52%), Gaps = 53/486 (10%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS--- 108
L AR++FD+ + WT+L+ + ++ L+ +M + V++ +
Sbjct: 89 LRDARELFDRPDARRNVVTWTALLSGYARARLVDEAEALFQRMPQRNVVSWNTMLEAYAA 148
Query: 109 ---VLNACA---RVP----SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
V +ACA R+P ++ + G +D A+ LF M ER+V++W+ MV G
Sbjct: 149 AGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGV 208
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK---------------------CG---- 193
A G + A+ +D M E+N V+W AMI+GY + C
Sbjct: 209 ARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVT 268
Query: 194 ------EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
+++ A+++FDE+ E + W M Y++ ++ A+ ++ M R ++V
Sbjct: 269 GFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVT 328
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRT----NYVSNALIHMHSKCGYLDLAWREF 303
+GA+ AC+ L A K V + C T +V +AL+++++KCG + LA + F
Sbjct: 329 FLGALDACSDLA----ALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLF 384
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ KD+IS++ +I A+A HG EA+ ++ KM+ G PN VT++ +L+ACSH GLV+
Sbjct: 385 DLSREKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVD 444
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT-WGALLG 422
+G K FE M I EH TC++DL R+G+L+ A LI K +G+ W ALLG
Sbjct: 445 EGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLG 504
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
C H N +G +AAR+LL+ P+ G LL+NIYAS GKWK++ ++ ++ KK
Sbjct: 505 GCNAHGNESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQ 564
Query: 483 PGCSWI 488
PGCSWI
Sbjct: 565 PGCSWI 570
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 158/370 (42%), Gaps = 77/370 (20%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD---------- 172
+I G + DA++LFD + +V+SW+A+V+ YA G ++ A+E +D
Sbjct: 48 LIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDRPDARRNVVT 107
Query: 173 ----------------------RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
RM ++N V+W M+ Y G V +A +FD + DA
Sbjct: 108 WTALLSGYARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDA 167
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W + V++G A E++ M + +V +A + + G V+ A +L
Sbjct: 168 GSWNILLATLVRSGSVDKARELFGRMPERDV----MAWTTMVDGVARSGKVDEARVLFDS 223
Query: 271 VDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFSR----------------IKNKD--- 310
+ E N VS NA+I +++ +D A F + I+NKD
Sbjct: 224 MPE-----RNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKR 278
Query: 311 ------------VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
V+++++M+ + +S+ AL +F M G PNQVTF+G L ACS
Sbjct: 279 ARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSD 338
Query: 359 GGLVEDGCKQFELMTR-VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
+ +G + +++ + F E + ++++ + G++ A L D D +W
Sbjct: 339 LAALCEGKQVHQMICKTTFQFDAFVE--SALMNVYAKCGEIGLARKLF-DLSREKDLISW 395
Query: 418 GALLGACKVH 427
++ A H
Sbjct: 396 NGIIAAYAHH 405
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 264/513 (51%), Gaps = 54/513 (10%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K +H YL+K +D + A L+ + GD L+ A VF++I K W ++I
Sbjct: 278 KIIHGYLIKL---GYDWDPFSANALVDMYAKVGD-LADAISVFEKI-KQPDIVSWNAVIA 332
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV--ICGYTKIGLMD 134
VLH H Q++ L +M R S L L +V + Y+K L++
Sbjct: 333 GCVLHEHHEQALELLGQMKR--------QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 384
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANC-GNMKAAKEFYDRMTEK---------------- 177
DA+ F+ + E+++I+W+A+++GY+ +M+A F + E
Sbjct: 385 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 444
Query: 178 --------------------NSVTWV--AMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
+S +V ++I YGKC V +A+++F+E + D + +
Sbjct: 445 GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTS 504
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
M Y Q G + A++++ M+ ++ ++AC L E L H+ +
Sbjct: 505 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 564
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
+ N+L++M++KCG +D A R FS + + ++S+S+MI A HG ++AL +F
Sbjct: 565 FVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFN 624
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRS 395
+M EG+ PN +T + VL AC+H GLV + FE M +FG KP+ EH CM+DLLGR+
Sbjct: 625 QMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRA 684
Query: 396 GQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLA 455
G++ +A L+ +A WGALLGA ++H + ELG AA L L PEK+G LLA
Sbjct: 685 GKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLA 744
Query: 456 NIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
NIYAS GKW++ V+ ++ +++ KK PG SWI
Sbjct: 745 NIYASAGKWENVAEVRRLMRDSKVKKEPGMSWI 777
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 190/413 (46%), Gaps = 40/413 (9%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D ++++FD+IP+ + W +L +V +++ L+ +M G+ + F+ SS+
Sbjct: 206 DEFLDSKRLFDEIPE-RNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 110 LNACARV---------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNV 148
+NAC + P A++ Y K+G + DA +F+ + + ++
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDI 324
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMT------------EKNSVTWVAMIAGYGKCGEVR 196
+SW+A++AG + + A E +M E + V ++ Y KC +
Sbjct: 325 VSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 384
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
+A+ F+ + E D W A+ Y Q A+ ++ M +E + ++ + + +
Sbjct: 385 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 444
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L V + + + YV N+LI + KC +++ A R F D++S++S
Sbjct: 445 GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTS 504
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MITA+A +G+ +EAL +FL+M++ ++P++ +L AC++ E G KQ + +
Sbjct: 505 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG-KQLHVHILKY 563
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG--TWGALLGACKVH 427
G +V++ + G ++ A + + + G +W A++G H
Sbjct: 564 GFVLDIFAGNSLVNMYAKCGSIDDAGRA---FSELTERGIVSWSAMIGGLAQH 613
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 213/515 (41%), Gaps = 132/515 (25%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
YAR++ D+ + W++LI + + +++ + +MH LGV + FTFSSVL
Sbjct: 107 FGYARKLVDESSE-PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLK 165
Query: 112 ACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC+ V L ++ Y K D++RLFD + ERNV+S
Sbjct: 166 ACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVS 225
Query: 151 WSAMVAGYAN---CGNMKAAKEFYDRM---TEKNSVTWVAMIAG---------------- 188
W+A+ + Y CG +A FY+ + + N + +M+
Sbjct: 226 WNALFSCYVQXDFCG--EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGY 283
Query: 189 -------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
Y K G++ +A VF++I +PD W A+ V + + + A
Sbjct: 284 LIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQA 343
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+E+ M+++ + L ++M + L +VS L+ M
Sbjct: 344 LELLGQMKRQ--------------LHSSLMKMDMESDL-------------FVSVGLVDM 376
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+SKC L+ A F+ + KD+I+++++I+ ++ + + EAL +F++M EGI NQ T
Sbjct: 377 YSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTL 436
Query: 350 IGVLTACS-----------HGGLVEDG-----------------CKQFELMTRVF---GI 378
+L + + HG V+ G C E R+F I
Sbjct: 437 STILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI 496
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF---CDAGTWGALLGACKVHVNAELGEI 435
L T M+ + GQ E+A L ++ +D D +LL AC E G+
Sbjct: 497 GDLVS-FTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 555
Query: 436 AARHLLELG---PEKTGNSALLANIYASMGKWKDS 467
H+L+ G GNS L N+YA G D+
Sbjct: 556 LHVHILKYGFVLDIFAGNS--LVNMYAKCGSIDDA 588
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 177/393 (45%), Gaps = 57/393 (14%)
Query: 33 QYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYA 92
++H + + L + L LP A ++ +P+ ++ T+ I N + +F + + Y+
Sbjct: 5 RHHSFQKPLHQRLHLP---FKPAPKLIQTVPQF-SEDPQTTAILNLIDKGNFTPTSVSYS 60
Query: 93 KMHRLGVLTSGFTFSSVLNA------CARVPSLLEAVICGYTKIGLMDDAQRLFDSMAER 146
K+ T ++A + PS+ +I Y+K A++L D +E
Sbjct: 61 KLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEP 120
Query: 147 NVISWSAMVAGYAN----CGNMKAAKEFYDRMTEKNSVTW-------------------- 182
+++SWSA+++GYA G + A E + + N T+
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180
Query: 183 -VAMIAG--------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
V +++G Y KC E ++K++FDEI E + W A+ CYVQ +
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCG 240
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A+ ++ M ++ +E ++ ++ACT L D I+ ++ + D + +NAL+
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE------- 340
M++K G L A F +IK D++S++++I H ++AL++ +M+ +
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMK 360
Query: 341 -GIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+E + +G++ S L+ED F L+
Sbjct: 361 MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLL 393
>gi|326530660|dbj|BAK01128.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 613
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 241/445 (54%), Gaps = 32/445 (7%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR---VPSL------- 119
L SL+ ++ H + L+A + R T++++L AC R +PS
Sbjct: 138 LANSLLARYLAHGSHASARRLFADVPR----PDAVTWNTLLRACLRSGLLPSARHLFDQM 193
Query: 120 -------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+++ G+ G MD A++LFD M ER+V+SW++M+AG+ CG+M+ A+ +D
Sbjct: 194 PVRDLVSYNSMLSGHAAAGDMDGARQLFDGMPERDVVSWNSMLAGHTRCGDMEEARRMFD 253
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
M E++ V+W +M+ GY + G+V A+ VFD + W + Y + + + +
Sbjct: 254 AMPERDVVSWNSMLDGYAQAGDVLAARAVFDGMPRRSTVSWNVVLALYARVKNWRECLRL 313
Query: 233 YKVMRQENVRI-SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS------NA 285
+ M + +E V ++AC LGD+E K V + R + A
Sbjct: 314 FDAMMAVGAAVPNEKTFVSVLTACGSLGDLERG----KRVHDLVRQRWETLVPDVLLLTA 369
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ M++KCG ++ A F + + V S++SMI + HG+S++AL++FL+M G PN
Sbjct: 370 LLTMYAKCGVMEAARVIFDSMGERSVPSWNSMIIGYGLHGQSEKALELFLEMERTGPRPN 429
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+ TF+ VL++C+HGGLV +G F+ M R++G++P EH CM+DLLGR+G L + +L+
Sbjct: 430 ETTFVCVLSSCAHGGLVLEGWWCFDRMVRLYGVEPKAEHFGCMMDLLGRAGLLTDSDTLV 489
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+ ++ WGA++ A + + LGE + L+E+ P++ G LL+NIYA G+W
Sbjct: 490 QNLQEKASPALWGAMVSASRAQNGSRLGEFVGKKLIEMRPKEVGPYVLLSNIYAGEGRWN 549
Query: 466 DSEIVKMMISETEKKKSPGCSWISS 490
D E V+ M+ +K G S + S
Sbjct: 550 DVEKVREMMKGNGAEKDVGLSLVGS 574
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 271/543 (49%), Gaps = 74/543 (13%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQY------HYYAQFLIRLLQLPGDNLSYARQVFDQI 62
R+ NQ K++ S++ L +P D + H YA+F L A+ +FD++
Sbjct: 34 RTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKF---------GKLRDAQNLFDKM 84
Query: 63 PKCKTQFLWTSLIRNHV-------LHAHF------------------------RQSILLY 91
K + F W +L+ + L A F ++S+ L+
Sbjct: 85 LK-RDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143
Query: 92 AKMHRLGVLTSGFTFSSVLNACARVPSL---------------------LEAVICGYTKI 130
+M R G + +T S+LNA A++ L A+ Y K
Sbjct: 144 KRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKC 203
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMI 186
G ++ A+ LFD + ++N++SW+ M++GYA G + +M + VT +I
Sbjct: 204 GEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII 263
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
A Y +CG V EA++VF E E D CW AM V Y +NG + A+ ++ M E++
Sbjct: 264 AAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSY 323
Query: 247 AMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ +S+C +L + A+ K + G + VS+ALI M+SKCG++D A F+
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL-LVSSALIDMYSKCGFIDDARSVFNL 382
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ ++V+S+++MI A +G ++AL++F M + +P+ VTFIG+L+AC H +E G
Sbjct: 383 MPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQG 442
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F+ ++ G+ P +H CMV+LLGR+G++E+A +LI + D W LL C
Sbjct: 443 QEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICS 502
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+ E+AARHL EL P +L+N+YASMG+WKD V+ ++ KK G
Sbjct: 503 TKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGF 562
Query: 486 SWI 488
SWI
Sbjct: 563 SWI 565
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 160/342 (46%), Gaps = 61/342 (17%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VF + K K WT+++ + + ++LL+ +M + +T SSV+++CA
Sbjct: 275 ARRVFSEF-KEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCA 333
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
++ SL A+I Y+K G +DDA+ +F+ M RNV+SW+A
Sbjct: 334 KLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNA 393
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEISE-- 207
M+ G A G+ K A E ++ M ++ ++VT++ +++ C + + ++ FD IS
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQH 453
Query: 208 ---PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
P +A M + G + A+ + K M + + + +S C+ GD+ A
Sbjct: 454 GMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTL---LSICSTKGDIVNA 510
Query: 265 AILAKHVDEGCCDRTNYVSNALI-HMHSKCGYLDLAWREFSRIKN----KDV-------- 311
+ A+H+ E D T V ++ +M++ G W++ + ++N K+V
Sbjct: 511 EVAARHLFE--LDPTIAVPYIMLSNMYASMG----RWKDVASVRNLMKSKNVKKFAGFSW 564
Query: 312 ISYSSMITAFADHGKSQ-------EALDMFL-KMRNEGIEPN 345
I + + F ++ E L+M + K++ EG PN
Sbjct: 565 IEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPN 606
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 45/189 (23%)
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIHMHSKCGYL--------------DLA 299
C + ++ A L H++ T+ ++ N L+H+++K G L +
Sbjct: 32 CVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFS 91
Query: 300 WR-----------------EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
W F R+ +D +SY++ I F+ + QE+L++F +M+ EG
Sbjct: 92 WNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGF 151
Query: 343 EPNQVTFIGVLTACS------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
EP + T + +L A + +G + + VF LT D+ + G
Sbjct: 152 EPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALT-------DMYAKCG 204
Query: 397 QLEKAHSLI 405
++E+A L
Sbjct: 205 EIEQARWLF 213
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/440 (35%), Positives = 251/440 (57%), Gaps = 15/440 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +ARQ+FD+ K WT++I + + ++I L+ M V + T ++L+
Sbjct: 203 LGFARQMFDE-SSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLS 261
Query: 112 ACARVPSLLEAVICGYTKIG-LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
AC++ G +++G + + R D N+++ AM+ Y CG + A+E
Sbjct: 262 ACSQK---------GDSEMGKTLHEHIRRKDITCSLNLLN--AMLDMYVKCGCLTTAREI 310
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++ M ++ +W +++ GY K G++ A+K+FDE+ E + W AM Y QN A+
Sbjct: 311 FNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEAL 370
Query: 231 EMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIH 288
E++ M + +E +V +SA QLG +EM I HV++ + + NA++
Sbjct: 371 ELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMD 430
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M++KCG +D A + F + K+++S++SMI+A+A +G +++AL +F +M G++P+ +T
Sbjct: 431 MYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHIT 490
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
FIGVL+ACS+GG V +G FE M FG++P EH CMVDLL R G L++A+ LI
Sbjct: 491 FIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRM 550
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
G WGALL AC+ H N E+ ++A LLEL PE +G +LLANI A KWKD
Sbjct: 551 PMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVR 610
Query: 469 IVKMMISETEKKKSPGCSWI 488
+V+ M+ E KK PG S I
Sbjct: 611 MVRRMMRERGVKKVPGHSLI 630
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 166/392 (42%), Gaps = 52/392 (13%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQ--IPKCKTQFLWT 72
QLKQ+ +++ T T +Q ++ L ++ YA +FDQ +P C F W
Sbjct: 67 QLKQIQAHI--TCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNC---FFWN 121
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGL 132
++I+ + H + +M R +F L AC + E ++
Sbjct: 122 TMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQ---FAEKIV-------- 170
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
MA +VI + R + + +I Y +
Sbjct: 171 ---------GMAVHSVI---------------------WKRGFDSDLFVQNGLIQNYVET 200
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G + A+++FDE S D W M Y +N + AI ++ M +V+ +EV M+ +
Sbjct: 201 GCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALL 260
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
SAC+Q GD EM L +H+ + + NA++ M+ KCG L A F+ ++ +DV
Sbjct: 261 SACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVF 320
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++S++ +A +G A +F +M E N V++ ++ S + + F M
Sbjct: 321 SWTSLLNGYAKNGDLGSARKLFDEMP----ERNIVSWNAMIAGYSQNSQPMEALELFHNM 376
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
V G+ P + L C++ G+ G LE +
Sbjct: 377 VDVVGLVPTEDTLVCVLSASGQLGCLEMGQEI 408
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 237/439 (53%), Gaps = 19/439 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L Y+RQVFD++P+ + + S+I +V + G++ S ++
Sbjct: 156 LGYSRQVFDRMPQ-RDSVSYNSMIDGYV----------------KCGLIESARELFDLMP 198
Query: 112 ACARVPSLLEAVICGYTKIGL-MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+ +I GY + ++ A +LF M E+++ISW++M+ GY G ++ AK+
Sbjct: 199 KEMKNLISWNCLISGYAQTSDGVNIASKLFSEMPEKDLISWNSMIDGYVKHGRIEDAKDL 258
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D M ++ +TW MI GY K G + +AK +FD+I D + +M YVQN Y A+
Sbjct: 259 FDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIPHRDVVAYNSMMAGYVQNKYHMEAL 318
Query: 231 EMY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
E++ K+ ++ ++ E +V +SA QLG + A + ++ + + ALI M
Sbjct: 319 ELFIKMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHFYIVKKQFFIGGKLGVALIDM 378
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+SKCG + A F ++NK++ ++++I A HG A DM L++ I+P+ +TF
Sbjct: 379 YSKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAIHGLGGPAFDMLLQIERLSIKPDDITF 438
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
IGVL ACSH GLV++G FELM R I+P +H CMVD+L RSG +E A LI
Sbjct: 439 IGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKILIEKMP 498
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+ W L AC H E+GE+ A+HL+ + LL+N+YAS G WKD
Sbjct: 499 IEPNDVIWRTFLTACSHHKEFEMGELVAKHLILQAGYNPSSYVLLSNMYASCGMWKDVRR 558
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ M+ E + +K PGCSWI
Sbjct: 559 VRTMMKERKIQKIPGCSWI 577
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 189/386 (48%), Gaps = 33/386 (8%)
Query: 54 YARQVFDQ-----IPKCKTQ--FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
+AR VF++ +P +T+ FLW ++I++H R+S+ L+ M GV F+
Sbjct: 49 FARCVFEEHHVYSLPYGETEDPFLWNAVIKSHSHGTDPRRSLFLFCLMLENGVSVDKFSL 108
Query: 107 SSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
S VL AC+R+ G+ K G M L + ++ + ++ Y CG +
Sbjct: 109 SLVLKACSRL---------GFVKAG-MXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGY 158
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE--PDASCWAAMTVCYVQNG 224
+++ +DRM +++SV++ +MI GY KCG + A+++FD + + + W + Y Q
Sbjct: 159 SRQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTS 218
Query: 225 YA-KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
A +++ M ++++ IS +M+ ++ D AK + + R
Sbjct: 219 DGVNIASKLFSEMPEKDL-ISWNSMIDGYVKHGRIED-------AKDLFDVMPRRDVITW 270
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-I 342
+I ++K G++ A F +I ++DV++Y+SM+ + + EAL++F+KM E +
Sbjct: 271 ATMIDGYAKLGFIHQAKTLFDQIPHRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHL 330
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCK-QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
P++ T + VL+A + G + F ++ + F I + ++D+ + G ++ A
Sbjct: 331 SPDETTLVIVLSAIAQLGRLSKAMDMHFYIVKKQFFIG--GKLGVALIDMYSKCGSIQHA 388
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVH 427
L+ + + W A++G +H
Sbjct: 389 -MLVFKGLENKNIDHWNAIIGGLAIH 413
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/410 (33%), Positives = 222/410 (54%), Gaps = 38/410 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
P + +I GY+K G +D A+RLFD M R SW++M+A YA+ G + A +DRM
Sbjct: 185 PIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLS 244
Query: 177 --------------------------------------KNSVTWVAMIAGYGKCGEVREA 198
+N + A++ Y KC + +A
Sbjct: 245 EGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDA 304
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
++ FD +S+ D W+ M Y QNG ++E+++ M+ + R +EV +VG ISAC QL
Sbjct: 305 RREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQL 364
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G E+ + + + T+Y+ +ALI M+++CG++ A FSR++ K VI+++SMI
Sbjct: 365 GSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMI 424
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
A +G +++A+ ++ KM G++PN++TF+ +L AC+H GLV+ G FE M R +
Sbjct: 425 RGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLV 484
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P EH C+VDLL +SG L +A+ I D + +A W LL +C+ H + EL ++A+R
Sbjct: 485 SPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASR 544
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL + P+ + LL+NIYA G W D+ ++ ++ +K SWI
Sbjct: 545 KLLAMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWI 594
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 187/381 (49%), Gaps = 42/381 (11%)
Query: 55 ARQVFDQIPK-----CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
AR +FD +P+ C T FL +SL R H + ++ MHR G V
Sbjct: 72 ARNLFDAVPRPAPALCST-FL-SSLSRASSHHDLLQT----FSSMHRKGAYVPSGCVPLV 125
Query: 110 LNACARVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
+CA S + V C GL+ D V +A+V YA G+M++A
Sbjct: 126 FKSCALTASSCQGRQVHCHALVRGLLGD------------VFVLTALVDFYAKNGDMESA 173
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+D M K+ + +I GY K G+V +A+++FD + ++ W +M CY G +
Sbjct: 174 VSVFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFR 233
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSNAL 286
A+ ++ M E R + + + S C + GD++ + + E D N V AL
Sbjct: 234 EALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGED--DLQNVIVHTAL 291
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M+ KC +D A REF R+ +DV+++S+MI +A +G+ E+L++F +M+ PN+
Sbjct: 292 MEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNE 351
Query: 347 VTFIGVLTACSHGG---LVEDGCKQFELMTRVFGIKPLTEHL-TCMVDLLGRSGQLEKAH 402
VT +GV++AC+ G LVE + R+ PLT +L + ++D+ R G + +A
Sbjct: 352 VTLVGVISACAQLGSDELVEQ-IGNYAENQRL----PLTSYLGSALIDMYTRCGHVGRAR 406
Query: 403 SLI--MDYKDFCDAGTWGALL 421
S+ M+ K TW +++
Sbjct: 407 SVFSRMEQKGVI---TWNSMI 424
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VF ++ + K W S+IR ++ +I LY KM GV + TF ++L AC
Sbjct: 405 ARSVFSRMEQ-KGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAAC- 462
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKE 169
T GL+D F+ M +++S + +V G + A +
Sbjct: 463 -------------THAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYK 509
Query: 170 FY-DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI--SEPD-ASCWAAMTVCYVQNGY 225
F D E N+V W +++ +V AK ++ EPD +S + ++ Y G
Sbjct: 510 FICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGL 569
Query: 226 AKAAIEMYKVMRQENVR 242
A E+ +MR +NV+
Sbjct: 570 WGDAREIRDLMRSKNVQ 586
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 197/336 (58%), Gaps = 1/336 (0%)
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
++++ Y CG++ AA++ D M K+ ++W +++A Y + ++ A++VF D
Sbjct: 186 NSLIGAYVACGDVGAARKVLDEMVVKDVISWTSIVAAYSRSRDMGSAEEVFALCPVKDMV 245
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W AM Y QN A+E ++ M + I EV++ GAISAC QLG V A + +
Sbjct: 246 AWTAMVTGYAQNAMPVKALEAFEQMAGAGMPIDEVSLTGAISACAQLGAVRRAVWIQEIA 305
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
D R V + L+ M++KCG +D A R F ++ K+V +YSSMI A HG++ +A+
Sbjct: 306 DRSGLGRNVVVGSGLVDMYAKCGLIDEACRVFEGMQEKNVYTYSSMIVGLASHGRANDAI 365
Query: 332 DMFLKM-RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
+F M R +EPN VTFIGVLTACSH G+V++G F M +GI P +H TCMVD
Sbjct: 366 ALFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYTCMVD 425
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGN 450
LLGR+G + +A L+ G WGALLGAC++H N ++ ++AA+HL +L PE GN
Sbjct: 426 LLGRAGLVIEALDLVKSMTVEPHGGVWGALLGACRIHGNTKVAKVAAQHLFKLEPEGIGN 485
Query: 451 SALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
LL+N AS G+W + V+ ++ KK P S
Sbjct: 486 YVLLSNTLASAGEWDEVSKVRKLMRIRGLKKDPAVS 521
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 263/555 (47%), Gaps = 80/555 (14%)
Query: 8 PRSKTFNQL-------------KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSY 54
P S TF+ + +QVH + K + Y+ LI G +
Sbjct: 249 PNSYTFSSILKCFAAVARVEEGRQVHGLICKL---GFNSYNTVVNSLISFY-FVGRKVRC 304
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A+++FD++ + W S+I +V + + I ++ KM GV T +V ACA
Sbjct: 305 AQKLFDELTD-RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACA 363
Query: 115 RVPSLL----------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+ +LL ++ Y+K G ++ A R+F+ M E+ V+SW+
Sbjct: 364 NIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWT 423
Query: 153 AMVAGY-----------------------------------ANCGNMKAAKEFYDRMTEK 177
+M+ GY A GN+K+ K +D + E
Sbjct: 424 SMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIREN 483
Query: 178 N----SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
N S A+ Y KCG +++A VF + + D W M Y +N A+ ++
Sbjct: 484 NLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLF 543
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M++E+ + + + AC L ++ + + YV+NA++ M+ KC
Sbjct: 544 AEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKC 602
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L LA F I NKD++S++ MI + HG EA++ F +MR GIEP++V+FI +L
Sbjct: 603 GLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISIL 662
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
ACSH GL+++G K F +M + I+P EH CMVDLL R+G L KAH I D
Sbjct: 663 YACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPD 722
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
A WGALL C++H + +L E A + EL PE TG LLANIYA KW++ + ++
Sbjct: 723 ATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKK 782
Query: 474 ISETEKKKSPGCSWI 488
I + KK+PGCSWI
Sbjct: 783 IGQRGLKKNPGCSWI 797
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 71/380 (18%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L R VFD++ + K FLW +I + ++ +SI L+ +M LG+ + +TFSS+L
Sbjct: 200 DLKEGRMVFDKLSESKI-FLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSIL 258
Query: 111 NACARVPSLLEA-----VIC--GYTKIGLMDD--------------AQRLFDSMAERNVI 149
A V + E +IC G+ + + AQ+LFD + +R+VI
Sbjct: 259 KCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVI 318
Query: 150 SWSAMVAGY-----------------------------------ANCGNMKAAKEFY--- 171
SW++M++GY AN G + K +
Sbjct: 319 SWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYS 378
Query: 172 ------DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
DR N+ ++ Y KCG++ A +VF+ + E W +M YV+ G
Sbjct: 379 IKAATLDREVRFNN----TLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGL 434
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
+ AI+++ M+ V A+ ++AC G+++ I+ ++ E + ++VSNA
Sbjct: 435 SDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNA 494
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L M++KCG + A FS +K KDVIS+++MI + + EAL +F +M+ E +P+
Sbjct: 495 LTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPD 553
Query: 346 QVTFIGVLTACSHGGLVEDG 365
T +L AC+ ++ G
Sbjct: 554 GTTVACILPACASLAALDKG 573
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 166/385 (43%), Gaps = 75/385 (19%)
Query: 106 FSSVLNACA---------RVPSLLEA------------VICGYTKIGLMDDAQRLFDSMA 144
+ S+L CA RV S++E+ ++ Y K G + + + +FD ++
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 145 ERNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVRE--- 197
E + W+ M++ Y+ GN + + +M E NS T+ +++ + V E
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272
Query: 198 --------------------------------AKKVFDEISEPDASCWAAMTVCYVQNGY 225
A+K+FDE+++ D W +M YV+NG
Sbjct: 273 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 332
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH-VDEGCCDRTNYVSN 284
IE++ M V I MV AC +G + + +L + + DR +N
Sbjct: 333 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNN 392
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
L+ M+SKCG L+ A R F R+ K V+S++SMIT + G S A+ +F +M++ G+ P
Sbjct: 393 TLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVP 452
Query: 345 NQVTFIGVLTACS------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
+ +L AC+ G +V D ++ L T F LT D+ + G +
Sbjct: 453 DVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALT-------DMYAKCGSM 505
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGA 423
+ AH + K D +W ++G
Sbjct: 506 KDAHDVFSHMKKK-DVISWNTMIGG 529
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 138/328 (42%), Gaps = 35/328 (10%)
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
+ + V ++ Y KCG+++E + VFD++SE W M Y +G +I ++K M
Sbjct: 184 DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQML 243
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
+ ++ + + + VE + + + + N V N+LI + +
Sbjct: 244 ELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVR 303
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A + F + ++DVIS++SMI+ + +G +++F+KM G++ + T + V AC+
Sbjct: 304 CAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACA 363
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA---------------H 402
+ G + G + + ++D+ + G L A
Sbjct: 364 NIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWT 423
Query: 403 SLIMDY----------KDFCDAGTWG---------ALLGACKVHVNAELGEIAARHLLEL 443
S+I Y K F + + G ++L AC ++ N + G+I ++ E
Sbjct: 424 SMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIREN 483
Query: 444 GPEKTG-NSALLANIYASMGKWKDSEIV 470
E S L ++YA G KD+ V
Sbjct: 484 NLETNSFVSNALTDMYAKCGSMKDAHDV 511
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 254/484 (52%), Gaps = 28/484 (5%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R + + +QVH ++ K + ++ A L+ L G L AR+VFD++ Q
Sbjct: 116 RREMLREGEQVHVHVFKNGFQTDERI---ATTLVDLYARCG-RLDDARRVFDRLLVKDAQ 171
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
L+ ++I ++ + L+ M R L ++ GY+
Sbjct: 172 -LYNTMIAAYMEAGEVELAEELFEVMPE------------------RNTHTLMEMVGGYS 212
Query: 129 KIGLMDDAQRLFDSMAER--NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
G MD A+ +F+ MA N++ +AM++G+A G++ A+ +D M +++ TW MI
Sbjct: 213 ARGDMDSAKHVFE-MANGVVNMVLCTAMISGFAKTGSVDDARSVFDGMRQRDVATWNVMI 271
Query: 187 A-GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
Y KCG V +A+KVFD + E + CW +M Y Q G K A+++++ M+ V+ +
Sbjct: 272 GVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADD 331
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ +S+C Q+G +++ + + D + V N+LI M+SKCG + A F
Sbjct: 332 ATIATVVSSCGQMGALDLGRYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRG 391
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVED 364
+ +D S++ MI FA +G S EALD+F +M EG + PN++TF+GVLT+CSHGGLVE
Sbjct: 392 LVKRDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQ 451
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G F M++V+GI P EH CMVDLLGR+ L +A I + D W +LL AC
Sbjct: 452 GYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFAC 511
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
+ L E A + EL P + G + LL+N+YA+ +W D V+ + + K PG
Sbjct: 512 RARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRVSKRPG 571
Query: 485 CSWI 488
CS I
Sbjct: 572 CSVI 575
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 237/438 (54%), Gaps = 11/438 (2%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L +R+ F ++ + W ++I + ++ L+ +M G+L FT S+L
Sbjct: 164 SLRDSRRFFGEMAD-RNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLL 222
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
AC+ +L ++G + L S + + I +A++ Y CG++ A
Sbjct: 223 FACSSEGNL---------EVGRLVHCHMLV-SGSRVDRILGNALLDMYGKCGDLWMAHRC 272
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D M KN VTW +M+ K G V + F+++ E + W AM CYVQ G +
Sbjct: 273 FDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETL 332
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++Y MR + E + G +SAC Q GD+ ++ +V + D + N+L+ M+
Sbjct: 333 DLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMY 392
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
++CG +D A F+ + NK+VIS++ +I A A HG++QE + F M ++ P+++TF+
Sbjct: 393 ARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFV 452
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
G+L+ACSHGGL+E G FE M RV+ ++P EH CMVDLLGR G L KA +LI D
Sbjct: 453 GLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSI 512
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D WGALLGAC++H N E+G++ + LLEL G L+ N++ +W+D + +
Sbjct: 513 KPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKL 572
Query: 471 KMMISETEKKKSPGCSWI 488
+ ++ E KK G S I
Sbjct: 573 RKLMKEQGTKKDMGVSSI 590
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 210/461 (45%), Gaps = 81/461 (17%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLP-GD---NLSYARQVFDQ 61
L+ + ++ L Q+H++L+ + D +Q + L GD L +AR++FD+
Sbjct: 16 LLRQCRSIQHLDQIHAHLV--VHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDR 73
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
IP+ +F++ +L+R + ++++ L+ + + G+L + FT VL AC V ++ E
Sbjct: 74 IPE-PDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAV-E 131
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+ + + + Q++F + +A++ +A+ G+++ ++ F+ M ++N V+
Sbjct: 132 HALAAHGVVVKLGFVQQIFVA---------NALLHFHASAGSLRDSRRFFGEMADRNVVS 182
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W MI GY + GEV EA +F E MR + +
Sbjct: 183 WNTMIGGYAQAGEVSEACALFGE-------------------------------MRHQGL 211
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+V + AC+ G++E+ ++ H+ + NAL+ M+ KCG L +A R
Sbjct: 212 LADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHR 271
Query: 302 EFSRIKNKDVISYSSMITAFADH-------------------------------GKSQEA 330
F + K+V++++SM+ A A H G+ E
Sbjct: 272 CFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHET 331
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
LD++ +MR+ GI P++ T GVL+AC G + G K R P L ++D
Sbjct: 332 LDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASG-KMIHCYVRDNFNDPGVTLLNSLLD 390
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
+ R GQ++ A L + + + +W ++GA +H A+
Sbjct: 391 MYARCGQVDTAIGLFTEMPNK-NVISWNVIIGALAMHGRAQ 430
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 20/263 (7%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G + A+++FD I EPD + + Y + + A+ +++ + Q + +E + +
Sbjct: 62 GGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVL 121
Query: 253 SACTQLGDVEMAAILAKH---VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
ACT + VE A LA H V G + +V+NAL+H H+ G L + R F + ++
Sbjct: 122 KACTTVRAVEHA--LAAHGVVVKLGFVQQI-FVANALLHFHASAGSLRDSRRFFGEMADR 178
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG---- 365
+V+S+++MI +A G+ EA +F +MR++G+ + T + +L ACS G +E G
Sbjct: 179 NVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVH 238
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
C +RV I ++D+ G+ G L AH D + TW ++L A
Sbjct: 239 CHMLVSGSRVDRILG-----NALLDMYGKCGDLWMAHR-CFDMMPIKNVVTWTSMLCAQA 292
Query: 426 VHVNAELGEIAARHLLELGPEKT 448
H + + A R E PE+
Sbjct: 293 KHGSVD----AVRDWFEQMPERN 311
>gi|414879404|tpg|DAA56535.1| TPA: pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 245/441 (55%), Gaps = 26/441 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR+ FD++P + + +L+ + + ++ L+ M +T
Sbjct: 107 LADARRAFDEMPD-RNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVT---------- 155
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKAAKE 169
+I G+ + G M +A+R F++ R V++W+ +V GY G+M+ A+E
Sbjct: 156 --------WATLIRGFAEKGDMAEARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETARE 207
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+DRM +N+ W +M+ GY K G+ EA+ VFD I + W A+ Y Q G ++ A
Sbjct: 208 VFDRMPARNAFVWSSMVTGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQA 267
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+E + +M QE V+ E M +SAC QLG +E + +++ + ++V N LI M
Sbjct: 268 LEAFHLMLQERVKPDEFTMASLLSACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDM 327
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG L A F ++ K+ +++MI+A A HG+S EAL +F +M G +PN +T
Sbjct: 328 YAKCGDLAHARYIFDSMRWKNNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITV 387
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ VL AC+HGG V++G + F + +G++ EH C+VDLLGR+G+L++A+ ++ +
Sbjct: 388 LAVLGACTHGGFVDEGLQIFNKLD-AYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVNNMS 446
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP-EKTGNSA---LLANIYASMGKWK 465
+ + WG+LLGAC+VH +AE+ + +L L + N A +LANI A+ +W+
Sbjct: 447 EEPNEVIWGSLLGACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWE 506
Query: 466 DSEIVKMMISETEKKKSPGCS 486
+E ++ ++ +K+PGCS
Sbjct: 507 QAEQMRRKMARRGVEKTPGCS 527
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 259/530 (48%), Gaps = 59/530 (11%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
FN +K+VH+ ++K H+ Y A LI L ++ A VF+QI L+
Sbjct: 36 FNHIKEVHAQIIKR--NLHNDL-YVAPKLISAFSL-CHQMNLAVNVFNQIQDPNVH-LYN 90
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR----------------- 115
+LIR HV ++ ++ + M + G+ FT+ +L AC
Sbjct: 91 TLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKY 150
Query: 116 -------VPSLL------------------------------EAVICGYTKIGLMDDAQR 138
VP+ L ++I G K G + A++
Sbjct: 151 GFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARK 210
Query: 139 LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREA 198
LFD MAER+ +SW+ ++ GY G M A +++M E+N V+W M++GY K G++ A
Sbjct: 211 LFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMA 270
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+ +FD++ + W + + + G AK A +Y M ++ + ++ ++AC +
Sbjct: 271 RMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAES 330
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G + + + + + + VSNAL+ M++KCG +D A F+ + +D++S++ M+
Sbjct: 331 GLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCML 390
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
A HG ++A+ +F KM+ EG +P++VT I +L AC+H G V+ G F M R GI
Sbjct: 391 QGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGI 450
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P EH CM+DLLGR G+LE+A L+ + WG LLGAC+VH L E
Sbjct: 451 VPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLD 510
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+ L GN ++L+NI+A+ G W +++ + T +K G S I
Sbjct: 511 RLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSI 560
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 161 CGNMKAAKEFYDRMTEKN--SVTWVA--MIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
C + KE + ++ ++N + +VA +I+ + C ++ A VF++I +P+ + +
Sbjct: 33 CTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTL 92
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
+VQN + A + M++ + + AC G + ++ HV++
Sbjct: 93 IRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGF 152
Query: 277 DRTNYVSNALIHMHSKCGYL--DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
+V N+LI +SKCG L + A + F + KD++S++SMI G A +F
Sbjct: 153 FGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLF 212
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
+E E + V++ +L G + FE M + + MV +
Sbjct: 213 ----DEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVS-----WSTMVSGYCK 263
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALL 421
+G +E A ++ D F + TW ++
Sbjct: 264 TGDMEMAR-MLFDKMPFKNLVTWTIII 289
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 251/476 (52%), Gaps = 18/476 (3%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K+VHS++L+ +Y + + D L AR +FD++P+ + W +++
Sbjct: 128 KEVHSFILRRGL----EYDIFVVNALITFYSRCDELVLARIMFDRMPE-RDIVSWNAMLA 182
Query: 77 NHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDD 135
+ + + L+ M L V + T SVL ACA+ L+ + +
Sbjct: 183 GYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGI-----------E 231
Query: 136 AQRLFD-SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
R + S + +V W+A++ YA CG++ A+E ++ M EK+++T+ +MI+GY G
Sbjct: 232 VHRFVNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGF 291
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V +A +F E P W A+ VQN + A+++++ M+ R + V + +
Sbjct: 292 VNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPV 351
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
+ ++ + + DR YV+ A+I ++KCGYL A F +IK + +I++
Sbjct: 352 FSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAW 411
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+S+I+A+A HG + AL +F +M GI+P+QVTF VL AC+H G +++ K F ++
Sbjct: 412 TSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLP 471
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+GI+PL EH CMV +L R+G+L A I A WGALL V + ELG+
Sbjct: 472 EYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGK 531
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
L E+ PE TGN ++AN+Y+ G+WKD++ ++ ++ E KK PG SWI +
Sbjct: 532 YVFDRLFEIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIET 587
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 7/248 (2%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ Y K G +R+A VF +I + W A+ + Y + ++++ + N
Sbjct: 44 LISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDV 103
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR----TNYVSNALIHMHSKCGYLDLAW 300
+ A L + + LAK V R +V NALI +S+C L LA
Sbjct: 104 KPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLAR 163
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHG 359
F R+ +D++S+++M+ ++ G ++ ++F M + ++PN +T + VL AC+
Sbjct: 164 IMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQS 223
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
+ G + + IK ++ L + G L+ A L + + DA T+ +
Sbjct: 224 NDLIFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLE-KDAITYCS 281
Query: 420 LLGACKVH 427
++ VH
Sbjct: 282 MISGYMVH 289
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/442 (32%), Positives = 256/442 (57%), Gaps = 22/442 (4%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L AR+ FD++P+ ++ W ++ + ++++ L+ +M G+ T+ +
Sbjct: 207 DLESARRYFDEMPE-RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTI 265
Query: 111 NACARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
++C+ + P+L ++++ ++D + +S + +A++ +A GN++ A+
Sbjct: 266 SSCSSIGDPTLADSIL------RMIDQKHIVLNSFVK------TALLDMHAKFGNLEIAR 313
Query: 169 EFYDRM-TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+D + +++N+VTW MI+ Y + G++ A+++FD + + D W +M Y QNG +
Sbjct: 314 NIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESA 373
Query: 228 AAIEMYKVMRQ-ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+IE++K M +++ EV + +SAC +G ++++ + V E N+L
Sbjct: 374 MSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSL 433
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+SKCG + A R F + +DV+S++++I+ FA +G +EA+ + L M EGIEP+
Sbjct: 434 IFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDH 493
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
VT+IGVLTACSH GL+ +G F+ + P +H CMVDLLGR+G+L++A LI
Sbjct: 494 VTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQ 548
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
AG +G+LL A ++H LGE+AA L EL P+ GN LL+NIYAS G+W+D
Sbjct: 549 SMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWED 608
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
+ V+ M+ + KKS G SW+
Sbjct: 609 VKRVREMMKKGGLKKSVGMSWV 630
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 204/449 (45%), Gaps = 54/449 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L + QL+Q H +L+ H+ ++ + LI +L + +Y +F P
Sbjct: 7 LASKISNIRQLRQFHGHLVHNSLHSHN--YWVSLLLINCTRLHA-HPAYVDSIFTSSPSP 63
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
+++ +++ + Q + L+ H L + F + ++ + ++ A +
Sbjct: 64 DAS-VYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNMFHAYVL 122
Query: 126 G----------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
Y K G +D A+ LF+ MAER + W++M++G GN A
Sbjct: 123 KLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVV 182
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++ M +N +TW +M+ GY K G++ A++ FDE+ E W AM Y Q K A
Sbjct: 183 LFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEA 242
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ ++ M +E + + V IS+C+ +GD +A + + +D+ ++V AL+ M
Sbjct: 243 LNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDM 302
Query: 290 HSKCGYLDLA---------------W----------------RE-FSRIKNKDVISYSSM 317
H+K G L++A W RE F + +DV+S++SM
Sbjct: 303 HAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 362
Query: 318 ITAFADHGKSQEALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
I +A +G+S ++++F +M + I+P++VT VL+AC H G ++ +++ R
Sbjct: 363 IAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIV-REK 421
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
IK ++ + + G + AH +
Sbjct: 422 NIKLGISGFNSLIFMYSKCGSVADAHRIF 450
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 251/451 (55%), Gaps = 27/451 (5%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHA----HFRQSILL--YAKMHRLGVLTS 102
GD+ YA ++ + P + + + N +LHA H +LL ++++HRL +LT
Sbjct: 30 GDH-RYAARLLESYPAPPS-----APLHNRLLHALASLHRPHPLLLPFFSRLHRLRLLTP 83
Query: 103 GFTFSSVLNACARVPSLLEAVICGYT---KIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
++ + S +C ++ K+G A + SA+V+ YA
Sbjct: 84 LSFTLLFSSSSSSASSSTPFFLCSHSLLIKLG----------HFASSDPFLSSALVSFYA 133
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
+ A++ +D +T +++ + A+++ Y K G V A+K+F+E+ + + W AM
Sbjct: 134 KSKLLVEARKVFDELTCRDTAVYNALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSG 193
Query: 220 YVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
Y QNG + A+E + M + V+ +E+ + + AC +G +E+ + ++ R
Sbjct: 194 YAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLR 253
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRI-KNKDVISYSSMITAFADHGKSQEALDMFLKM 337
YV+NAL+ M+SKCG + AW+ F I + +D+ S++SMI AFA HG +EAL +F K+
Sbjct: 254 NVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKL 313
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
R G++P+ +TF+GV+ AC+HGGLV +G F+ M F +KP EH CMVDLLGR+G
Sbjct: 314 RMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGL 373
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
L +++SLI DA WGALLGAC H N EL E+A L+ L P+ T N +L+NI
Sbjct: 374 LIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAELAMDKLIHLEPQNTANLVILSNI 433
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
YAS GKW V ++ E + KKS G S+I
Sbjct: 434 YASSGKWDGVAQVWKLLKEKDHKKSAGYSFI 464
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/442 (32%), Positives = 256/442 (57%), Gaps = 22/442 (4%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L AR+ FD++P+ ++ W ++ + ++++ L+ +M G+ T+ +
Sbjct: 207 DLESARRYFDEMPE-RSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTI 265
Query: 111 NACARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
++C+ + P+L ++++ ++D + +S + +A++ +A GN++ A+
Sbjct: 266 SSCSSIGDPTLADSIL------RMIDQKHIVLNSFVK------TALLDMHAKFGNLEIAR 313
Query: 169 EFYDRM-TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+D + +++N+VTW MI+ Y + G++ A+++FD + + D W +M Y QNG +
Sbjct: 314 NIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESA 373
Query: 228 AAIEMYKVMRQ-ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+IE++K M +++ EV + +SAC +G ++++ + V E N+L
Sbjct: 374 MSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSL 433
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+SKCG + A R F + +DV+S++++I+ FA +G +EA+ + L M EGIEP+
Sbjct: 434 IFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDH 493
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
VT+IGVLTACSH GL+ +G F+ + P +H CMVDLLGR+G+L++A LI
Sbjct: 494 VTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQ 548
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
AG +G+LL A ++H LGE+AA L EL P+ GN LL+NIYAS G+W+D
Sbjct: 549 SMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWED 608
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
+ V+ M+ + KKS G SW+
Sbjct: 609 VKRVREMMKKGGLKKSVGMSWV 630
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 204/449 (45%), Gaps = 54/449 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L + QL+Q H +L+ H+ ++ + LI +L + +Y +F P
Sbjct: 7 LASKISNIRQLRQFHGHLVHNSLHSHN--YWVSLLLINCTRLHA-HPAYVDSIFTSSPSP 63
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
+++ +++ + Q + L+ H L + F + ++ + +L A +
Sbjct: 64 DAS-VYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLFHAYVL 122
Query: 126 G----------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
Y K G +D A+ LF+ MAER + W++M++G GN A
Sbjct: 123 KLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVV 182
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++ M +N +TW +M+ GY K G++ A++ FDE+ E W AM Y Q K A
Sbjct: 183 LFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEA 242
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ ++ M +E + + V IS+C+ +GD +A + + +D+ ++V AL+ M
Sbjct: 243 LNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDM 302
Query: 290 HSKCGYLDLA---------------W----------------RE-FSRIKNKDVISYSSM 317
H+K G L++A W RE F + +DV+S++SM
Sbjct: 303 HAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 362
Query: 318 ITAFADHGKSQEALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
I +A +G+S ++++F +M + I+P++VT VL+AC H G ++ +++ R
Sbjct: 363 IAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIV-REK 421
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
IK ++ + + G + AH +
Sbjct: 422 NIKLGISGFNSLIFMYSKCGSVADAHRIF 450
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 251/451 (55%), Gaps = 27/451 (5%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHA----HFRQSILL--YAKMHRLGVLTS 102
GD+ YA ++ + P + + + N +LHA H +LL ++++HRL +LT
Sbjct: 30 GDH-RYAARLLESYPAPPS-----APLHNRLLHALASLHRPHPLLLPFFSRLHRLRLLTP 83
Query: 103 GFTFSSVLNACARVPSLLEAVICGYT---KIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
++ + S +C ++ K+G A + SA+V+ YA
Sbjct: 84 LSFTLLFSSSSSSASSSTPFFLCSHSLLIKLG----------HFASSDPFLSSALVSFYA 133
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
+ A++ +D +T +++ + A+++ Y K G V A+K+F+E+ + + W AM
Sbjct: 134 KSKLLVEARKVFDELTCRDTAVYNALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSG 193
Query: 220 YVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
Y QNG + A+E + M + V+ +E+ + + AC +G +E+ + ++ R
Sbjct: 194 YAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLR 253
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRI-KNKDVISYSSMITAFADHGKSQEALDMFLKM 337
YV+NAL+ M+SKCG + AW+ F I + +D+ S++SMI AFA HG +EAL +F K+
Sbjct: 254 NVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKL 313
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
R G++P+ +TF+GV+ AC+HGGLV +G F+ M F +KP EH CMVDLLGR+G
Sbjct: 314 RMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGL 373
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
L +++SLI DA WGALLGAC H N EL E+A L+ L P+ T N +L+NI
Sbjct: 374 LIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAELAMDKLIHLEPQNTANLVILSNI 433
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
YAS GKW V ++ E + KKS G S+I
Sbjct: 434 YASSGKWDGVAQVWKLLKEKDHKKSAGYSFI 464
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/533 (30%), Positives = 269/533 (50%), Gaps = 67/533 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+HSYLLK + Y + + L + ++ A +F+ + LW ++
Sbjct: 265 KQLHSYLLKAGMS----FDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNV-VLWNLMLV 319
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA---------RVPSL-----LEA 122
+ + +S ++ +M G+ + FT+ +L C ++ SL E+
Sbjct: 320 AYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFES 379
Query: 123 -------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN--------------- 160
+I Y+K +D A+++ + + +R+V+SW++M+AGY
Sbjct: 380 DMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQ 439
Query: 161 -----------------CGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKCGEVR 196
C +KA ++ Y + W ++ Y +CG
Sbjct: 440 DCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSE 499
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
EA +F EI D W + + Q+ + A+ ++ M Q + + + AISA
Sbjct: 500 EAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALA 559
Query: 257 QLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
L D++ + + V G T V+NALI ++ KCG ++ A FS + ++ +S++
Sbjct: 560 NLADIKQGKQVHGRAVKTGHTSETE-VANALISLYGKCGSIEDAKMIFSEMSLRNEVSWN 618
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
++IT+ + HG+ EALD+F +M+ EG++PN VTFIGVL ACSH GLVE+G F+ M+ V
Sbjct: 619 TIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNV 678
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
+G+ P+ +H C+VD+LGR+GQL++A + + +A W LL ACKVH N E+GE+
Sbjct: 679 YGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGEL 738
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA+HLLEL P + + LL+N YA GKW + + V+ M+ + +K PG SWI
Sbjct: 739 AAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWI 791
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 177/427 (41%), Gaps = 63/427 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
ARQVF ++ + W +++ + +++ LY++MH V+ + + SSVL+AC
Sbjct: 97 ARQVFKELSS-RDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACT 155
Query: 115 RVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ + A+I Y G A+R+F M + ++++
Sbjct: 156 KGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNT 215
Query: 154 MVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG--------------------- 188
+++G+A CG+ + A + +D M + VT +++A
Sbjct: 216 LISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAG 275
Query: 189 --------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y KCG++ A +F+ + W M V Y Q + E++
Sbjct: 276 MSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFG 335
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ + ++ + CT G +E+ + + + YVS LI M+SK
Sbjct: 336 QMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYR 395
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
LD A + ++ +DV+S++SMI + H +EAL F +M++ G+ P+ + +
Sbjct: 396 CLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAAS 455
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC+ + G Q V G +V+L R G+ E+A SL + D D
Sbjct: 456 ACAGIKAMRQGL-QIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI-DHKDE 513
Query: 415 GTWGALL 421
TW L+
Sbjct: 514 ITWNGLI 520
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 8/242 (3%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y K G V +A++VF E+S D W AM Y Q G K A +Y M V +
Sbjct: 84 LIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPT 143
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+ +SACT+ ++ V + C T +V NALI ++ G LA R F
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSET-FVGNALIALYLGFGSFKLAERVF 202
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ D ++++++I+ A G + AL +F +M+ G+ P+ VT +L AC+ G ++
Sbjct: 203 CDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQ 262
Query: 364 DGCKQFE--LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G KQ L+ +TE ++DL + G +E AH I + D + W +L
Sbjct: 263 KG-KQLHSYLLKAGMSFDYITE--GSLLDLYVKCGDIETAHD-IFNLGDRTNVVLWNLML 318
Query: 422 GA 423
A
Sbjct: 319 VA 320
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 153/340 (45%), Gaps = 41/340 (12%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM------------ 174
Y K GL+ A+++F ++ R+ +SW AM++GYA G K A Y +M
Sbjct: 88 YAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVL 147
Query: 175 -------TEKN------------------SVTWV--AMIAGYGKCGEVREAKKVFDEISE 207
T+ S T+V A+IA Y G + A++VF ++
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLF 207
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D + + + Q G+ + A++++ M+ +R V + ++AC +GD++ L
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
++ + +L+ ++ KCG ++ A F+ +V+ ++ M+ A+
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++ ++F +M+ GI PN+ T+ +L C+ G +E G +Q ++ G +
Sbjct: 328 AKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELG-EQIHSLSIKNGFESDMYVSGV 386
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++D+ + L+KA I++ + D +W +++ H
Sbjct: 387 LIDMYSKYRCLDKARK-ILEMLEKRDVVSWTSMIAGYVQH 425
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 246/443 (55%), Gaps = 16/443 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ YA+ VFD++ +++ W SLI + + +++ ++ +M + GV T +SV++
Sbjct: 202 VEYAQSVFDEMT-VRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVS 260
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
ACA + ++ E G A+ + ++I +A++ YA C + A+ +
Sbjct: 261 ACATISAIKE---------GQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIF 311
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D M ++ V+ +M++GY K +V+ A+ +F + D W A+ QNG + A+
Sbjct: 312 DMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALI 371
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC------DRTNYVSNA 285
+++++++E+V + ++AC L D+++ HV + D +V N+
Sbjct: 372 LFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNS 431
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
LI M+ KCG ++ R F + KD +S+++MI +A +G +AL++F KM G P+
Sbjct: 432 LIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPD 491
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
VT IGVL ACSH GL+++G F MT G+ PL +H TCMVDLLGR+G LE+A +LI
Sbjct: 492 HVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLI 551
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+ DA WG+LL ACKVH N +LGE + LLE+ PE +G LL+N+YA WK
Sbjct: 552 EEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWK 611
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
+ V+ ++ + K PGCSWI
Sbjct: 612 NVVRVRKLMRQRGVVKQPGCSWI 634
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 137/269 (50%), Gaps = 28/269 (10%)
Query: 106 FSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS----WSAMVAGYANC 161
FS +LN CAR S D R+ + + S + ++ Y C
Sbjct: 22 FSKLLNQCARSRS--------------ARDTSRVHACIIKSPFASETFIQNRLIDVYGKC 67
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
G + A++ +DRM E+N +W ++I + K G + +A +F+++ + D W +M +
Sbjct: 68 GCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFE 127
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
Q+G A+ + M ++E + A+SAC L D+++ + + V R+NY
Sbjct: 128 QHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVY-----RSNY 182
Query: 282 VSN-----ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+S+ AL+ M+SKCG ++ A F + + +S++S+IT + +G EAL +F++
Sbjct: 183 LSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVE 242
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
M G+EP++VT V++AC+ +++G
Sbjct: 243 MIKCGVEPDEVTLASVVSACATISAIKEG 271
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 248/443 (55%), Gaps = 18/443 (4%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSV 109
N+ A+++FD++ + W +I +V F +I + +M + G T S
Sbjct: 293 NVENAKKLFDEMTT-RDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVST 351
Query: 110 LNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
L+AC + +L L I Y + L F + + +A++ YA CG + A+
Sbjct: 352 LSACTALKNLELGDEIHNYVRKELG------FTTRID------NALLDMYAKCGCLNIAR 399
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+D M+ KN + W +MI+GY CG++REA+ +FD+ D W AM YVQ +
Sbjct: 400 NIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDD 459
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+ +++ M+ + V+ + +V ++ C QLG +E + ++DE V ALI
Sbjct: 460 AVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIE 519
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKCG +D + F +++KD S++S+I A +GK+ EAL +F +M G +P+ +T
Sbjct: 520 MYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDIT 579
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
FIGVL+ACSHGGLVE+G + F M +V I+P EH C++DLLGR+G L++A LI +
Sbjct: 580 FIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEI 639
Query: 409 K-DFCD--AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+ C+ +GALL AC++H N ++GE A+ L + + LLANIYAS+ +W+
Sbjct: 640 PIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWE 699
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D++ V+ + E KK PGCS I
Sbjct: 700 DAKKVRRKMKELGVKKMPGCSLI 722
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 205/470 (43%), Gaps = 109/470 (23%)
Query: 11 KTFNQLKQVHSYLLKT-LTKPHDQYHYYAQFLIRLLQLPGD----NLSYARQVFDQIPKC 65
K+ +QLKQ+ S + + L D + +L+ D NL YA ++F+ +
Sbjct: 154 KSMDQLKQIQSQIFRIGLEGDRDTIN-------KLMAFCADSSLGNLRYAEKIFNYVQD- 205
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA--CARVPSLLEAV 123
+ F++ +++ + R+ +LL+ ++ G+ GFT+ VL A C R E V
Sbjct: 206 PSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKV 265
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
K G MD +++S+ + Y N++ AK+ +D MT ++SV+W
Sbjct: 266 RGFIVKTG-MDLDNYVYNSLIDM-----------YYELSNVENAKKLFDEMTTRDSVSWN 313
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVR 242
MI+GY +C +A F E M+QE N +
Sbjct: 314 VMISGYVRCRRFEDAINTFRE-------------------------------MQQEGNEK 342
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
E +V +SACT L ++E+ + +V + T + NAL+ M++KCG L++A
Sbjct: 343 PDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNALLDMYAKCGCLNIARNI 401
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLK-------------------------- 336
F + K+VI ++SMI+ + + G +EA D+F K
Sbjct: 402 FDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAV 461
Query: 337 -----MRNEGIEPNQVTFIGVLTACSHGGLVEDGC-------KQFELMTRVFGIKPLTEH 384
M+ + ++P++ T + +LT C+ G +E G + M V G
Sbjct: 462 ALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVG------- 514
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
T ++++ + G ++K+ + + +D D +W +++ C + +N + E
Sbjct: 515 -TALIEMYSKCGCVDKSLEIFYELEDK-DTASWTSII--CGLAMNGKTSE 560
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 135/294 (45%), Gaps = 16/294 (5%)
Query: 160 NCGNMKAAKEFYDRM------TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
NC +M K+ ++ +++++ + G +R A+K+F+ + +P +
Sbjct: 152 NCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVY 211
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
M Y + G + + +++ +R++ + + A L DV + + +
Sbjct: 212 NVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVK 271
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
D NYV N+LI M+ + ++ A + F + +D +S++ MI+ + + ++A++
Sbjct: 272 TGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINT 331
Query: 334 FLKMRNEGIE-PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
F +M+ EG E P++ T + L+AC+ +E G + + + G ++ ++D+
Sbjct: 332 FREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLDMY 389
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN-AELGEIAARHLLELGP 445
+ G L A + I D + W +++ ++N +L E AR L + P
Sbjct: 390 AKCGCLNIARN-IFDEMSMKNVICWTSMISG---YINCGDLRE--ARDLFDKSP 437
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/450 (32%), Positives = 236/450 (52%), Gaps = 44/450 (9%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L R++FD++ K FLW L+ + +FR+S+ L+ +M LG+
Sbjct: 151 DLREGRRIFDKVANEKV-FLWNLLMNGYAKIGNFRESLSLFKRMRELGI----------- 198
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
RV S A++LFD + +R+VISW++M++GY + G + +
Sbjct: 199 ---RRVES-----------------ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDL 238
Query: 171 YDRM----TEKNSVTWVA--------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
+++M + T V+ ++ Y K G + A +VF+ + E W +M
Sbjct: 239 FEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIA 298
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
Y + G + ++ ++ M +E++ + + M + AC L +E + H+
Sbjct: 299 GYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSL 358
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
+V+NAL+ M+ KCG L LA F I KD++S++ MI + HG EA+ F +MR
Sbjct: 359 DRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMR 418
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
N GIEP++V+FI +L ACSH GL+++G F +M I+P +EH C+VDLL R+G L
Sbjct: 419 NSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNL 478
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
KA+ I DA WGALL C+++ + +L E A H+ EL PE TG LLANIY
Sbjct: 479 SKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIY 538
Query: 459 ASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A KW++ + ++ I +K+PGCSWI
Sbjct: 539 AEAEKWEEVKKLRERIGRRGLRKNPGCSWI 568
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 36/281 (12%)
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E + V ++ Y CG++RE +++FD+++ W + Y + G + ++ ++K
Sbjct: 132 VEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFK 191
Query: 235 VMRQENVRISEVAMVGAISACTQLGD---VEMAAILAKHVDEGCCDR------------- 278
MR+ +R E A +LGD + ++++ +V G ++
Sbjct: 192 RMRELGIRRVESAR----KLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI 247
Query: 279 -TNY---------VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
T+ ++N L+ M+SK G L+ A + F + + V+S++SMI +A G S
Sbjct: 248 NTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSD 307
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK-QFELMTRVFGIKPLTEHL-T 386
++ +F +M E + PN +T +L AC+ +E G + ++ F L H+
Sbjct: 308 MSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFS---LDRHVAN 364
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+VD+ + G L A L+ D D +W ++ +H
Sbjct: 365 ALVDMYLKCGALGLAR-LLFDMIPEKDLVSWTVMIAGYGMH 404
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 248/443 (55%), Gaps = 18/443 (4%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSV 109
N+ A+++FD++ + W +I +V F +I + +M + G T S
Sbjct: 247 NVENAKKLFDEMTT-RDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVST 305
Query: 110 LNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
L+AC + +L L I Y + L F + + +A++ YA CG + A+
Sbjct: 306 LSACTALKNLELGDEIHNYVRKELG------FTTRID------NALLDMYAKCGCLNIAR 353
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+D M+ KN + W +MI+GY CG++REA+ +FD+ D W AM YVQ +
Sbjct: 354 NIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDD 413
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+ +++ M+ + ++ + +V ++ C QLG +E + ++DE V ALI
Sbjct: 414 AVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIE 473
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKCG +D + F +++KD S++S+I A +GK+ EAL +F +M G +P+ +T
Sbjct: 474 MYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDIT 533
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
FIGVL+ACSHGGLVE+G + F M +V I+P EH C++DLLGR+G L++A LI +
Sbjct: 534 FIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEI 593
Query: 409 K-DFCD--AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+ C+ +GALL AC++H N ++GE A+ L + + LLANIYAS+ +W+
Sbjct: 594 PIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWE 653
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D++ V+ + E KK PGCS I
Sbjct: 654 DAKKVRRKMKELGVKKMPGCSLI 676
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 205/470 (43%), Gaps = 109/470 (23%)
Query: 11 KTFNQLKQVHSYLLKT-LTKPHDQYHYYAQFLIRLLQLPGD----NLSYARQVFDQIPKC 65
K+ +QLKQ+ S + + L D + +L+ D NL YA ++F+ +
Sbjct: 108 KSMDQLKQIQSQIFRIGLEGDRDTIN-------KLMAFCADSSLGNLRYAEKIFNYVQD- 159
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA--CARVPSLLEAV 123
+ F++ +++ + R+ +LL+ ++ G+ GFT+ VL A C R E V
Sbjct: 160 PSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKV 219
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
K G MD +++S+ + Y N++ AK+ +D MT ++SV+W
Sbjct: 220 RGFIVKTG-MDLDNYVYNSLIDM-----------YYELSNVENAKKLFDEMTTRDSVSWN 267
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVR 242
MI+GY +C +A F E M+QE N +
Sbjct: 268 VMISGYVRCRRFEDAINTFRE-------------------------------MQQEGNEK 296
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
E +V +SACT L ++E+ + +V + T + NAL+ M++KCG L++A
Sbjct: 297 PDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNALLDMYAKCGCLNIARNI 355
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLK-------------------------- 336
F + K+VI ++SMI+ + + G +EA D+F K
Sbjct: 356 FDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAV 415
Query: 337 -----MRNEGIEPNQVTFIGVLTACSHGGLVEDG-------CKQFELMTRVFGIKPLTEH 384
M+ + I+P++ T + +LT C+ G +E G + M V G
Sbjct: 416 ALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVG------- 468
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
T ++++ + G ++K+ + + +D D +W +++ C + +N + E
Sbjct: 469 -TALIEMYSKCGCVDKSLEIFYELEDK-DTASWTSII--CGLAMNGKTSE 514
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 135/294 (45%), Gaps = 16/294 (5%)
Query: 160 NCGNMKAAKEFYDRM------TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
NC +M K+ ++ +++++ + G +R A+K+F+ + +P +
Sbjct: 106 NCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVY 165
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
M Y + G + + +++ +R++ + + A L DV + + +
Sbjct: 166 NVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVK 225
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
D NYV N+LI M+ + ++ A + F + +D +S++ MI+ + + ++A++
Sbjct: 226 TGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINT 285
Query: 334 FLKMRNEGIE-PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
F +M+ EG E P++ T + L+AC+ +E G + + + G ++ ++D+
Sbjct: 286 FREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLDMY 343
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN-AELGEIAARHLLELGP 445
+ G L A + I D + W +++ ++N +L E AR L + P
Sbjct: 344 AKCGCLNIARN-IFDEMSMKNVICWTSMISG---YINCGDLRE--ARDLFDKSP 391
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 262/512 (51%), Gaps = 36/512 (7%)
Query: 3 SKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQI 62
S L PR+ ++Q+H +L+ H L + G + YAR+VFD I
Sbjct: 6 SARLSPRA-----VRQIHGHLVVGGIAAARLQHLRELLLSCVATFRG-RMGYARKVFDGI 59
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL-TSGFTFSSVLNACARVPS--- 118
P+ F+ +++R + + +Y +M L FTF +L ACA +P
Sbjct: 60 PR-PDLFMHNAMVRGYAHAGAPGDAFAVYRRMTEASRLRPDAFTFCYLLRACAGLPGSRA 118
Query: 119 ------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
+ A+I + K G + A L D E +V++WSA++AG+A
Sbjct: 119 GRQVHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIAGHAA 178
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
G+M AA++ +D T K+ V W M+ Y K GE+ A+++FD E D W + Y
Sbjct: 179 RGDMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGY 238
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
G K A+E++ MR E +V +S C G ++ ++ + +R
Sbjct: 239 AAQGMLKHALEVFDEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMIHHQLH---LERRP 295
Query: 281 YVS----NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
++S NAL+ M++KCG L A F+ +K+ DV +++S+I A HG++++++ F K
Sbjct: 296 WISIVVGNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSVIGGLAFHGQAEQSVRFFKK 355
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M + I PN+++F+ VL ACSH GLVEDG K F LM +GI+P H +C+VD+LGR+G
Sbjct: 356 MLEKRIHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGRAG 415
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L++A++++ + + A W LLGAC+ H N LG++ LL + + + + LL+
Sbjct: 416 LLDEAYAIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDASADYVLLSG 475
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
IYAS G+W E + + +K+ G + I
Sbjct: 476 IYASSGEWLGVETERRSMDRRGIRKAAGYAQI 507
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/541 (30%), Positives = 271/541 (50%), Gaps = 68/541 (12%)
Query: 9 RSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQL-PGDNLSYARQVFDQIPKC 65
+ T +QLKQ+H+ +L+T P + A ++ L +L YAR VF+QIP
Sbjct: 49 KCTTMSQLKQIHAQMLRTCLFVDP-----FSASKIVAFCALHDSGSLPYARLVFNQIPN- 102
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
T F S+IR + RQ+IL Y M G+ FTF S+ +C V + + C
Sbjct: 103 PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG-VLCEGKQLHC 161
Query: 126 GYTKIGLMDDA-------------------QRLFDSMAERNVISWSAMVAGYANCGNMKA 166
TK+G DA +++FD M ++V+SW+ M+ YA
Sbjct: 162 HSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHE 221
Query: 167 AKEFYDRM----TEKNSVTWV-----------------------------------AMIA 187
A + + RM + N +T V A++
Sbjct: 222 AIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMD 281
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y KCG A+ +F+++ E + CW M +V++ + A+ ++ M+ V+ +V
Sbjct: 282 VYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVT 341
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
M + ACT LG +E+ L ++++ + + AL+ M++KCG ++ A R F +
Sbjct: 342 MASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMP 401
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
KDV++++++I A G+ +AL++F +M+ ++P+ +TF+GVL ACSH GLV +G
Sbjct: 402 EKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIA 461
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F M +GI+P EH CMVD+LGR+G++ +A LI + D LL AC++H
Sbjct: 462 YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIH 521
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N + E AA+ L+EL P+ G LL+NIY+SM W+ ++ ++ ++ E KK PGCS
Sbjct: 522 GNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSA 581
Query: 488 I 488
I
Sbjct: 582 I 582
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 258/509 (50%), Gaps = 63/509 (12%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
LI + GD +S ARQ F++I K WTSL+ +V H+R+++ LY +M GV
Sbjct: 284 LINMYARCGD-VSSARQAFEKIQN-KHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVH 341
Query: 101 TSGFTFSSVLNACARVPSLLE--------------------AVICGYTKIGLMDDAQRLF 140
G T+ + L ACA + +L E A++ Y K G +D A+ +F
Sbjct: 342 ADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAVF 401
Query: 141 DSMAE-RNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV------------ 183
+ + + RNV W+AM++ YA G+ + A E YD+M T N T+
Sbjct: 402 NRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDL 461
Query: 184 -----------------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
A++ Y KCG + AK F+ D W AM Y
Sbjct: 462 EAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAY 521
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
Q+G + A+++Y+ M + V EV + ++SAC G +++ + V + R++
Sbjct: 522 AQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSS 581
Query: 281 Y-VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
V AL++M+ +CG L+ A F + +DV+S+++M +A+A G + + LD++L+M
Sbjct: 582 LMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVL 641
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
GI PN++TF +L CSH GL+ G + F M + P+ EH CMVDLLGRSG+L
Sbjct: 642 HGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLR 701
Query: 400 KAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYA 459
A +L+ D+ W +LG+CK H +A+ + AAR + EL PE T +LL++I+
Sbjct: 702 DAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFT 761
Query: 460 SMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ G +++ V++ + E KK PG S I
Sbjct: 762 AAGLPQEALEVQLSMKEMGLKKPPGQSLI 790
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 208/428 (48%), Gaps = 64/428 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD I K + WTS+I ++ + +++ LY +M G+ TF+S L AC
Sbjct: 200 ARKVFDGI-KNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACT 258
Query: 115 R-----------VPSLLE------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
+ V S +E A+I Y + G + A++ F+ + ++V+ W++++
Sbjct: 259 KLVDGKAIHARIVSSNMESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTA 318
Query: 158 YANCGNMKAAKEFYDRMTEK----NSVTWV------------------------------ 183
Y + + A + Y RM + + VT+V
Sbjct: 319 YVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSL 378
Query: 184 ----AMIAGYGKCGEVREAKKVFDEISEP-DASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
A++ Y KCGE+ A+ VF+ + + + CW AM Y Q G+ + A+E+Y M
Sbjct: 379 VVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVA 438
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
E R +E ++AC+ GD+E + HV+ V NAL+ M++KCG L+L
Sbjct: 439 EGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLEL 498
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A F KD++S+++MI A+A HG +EALD++ M ++G+ P++VT L+AC+
Sbjct: 499 AKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAI 558
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
G ++ G E+ +RV + L T +V++ GR G+LE A S+ D D
Sbjct: 559 SGSLQLG---REIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQR-DVL 614
Query: 416 TWGALLGA 423
+W A+ A
Sbjct: 615 SWTAMTSA 622
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 203/417 (48%), Gaps = 53/417 (12%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R + + K VH +LL+T H + + LI++ G+ + AR F K
Sbjct: 54 RLGSLAEGKLVHRHLLRT---GHGRNQFLGNLLIQMYGNCGE-IHLARAAFQNFASIKAV 109
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
+ ++ + + + +++ LY +M G T+ VL +C +
Sbjct: 110 ACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSC--------------S 155
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
+G + +A+ + S+ E A + D ++ +N A++
Sbjct: 156 AVGSLREAREIHASIIE--------------------APQIIRDNLSLQN-----ALVNM 190
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
YGKCG V EA+KVFD I DA W +M Y NG+ A+++Y+ M + ++ +
Sbjct: 191 YGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITF 250
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
A+ ACT+L V+ AI A+ V +++V +ALI+M+++CG + A + F +I+N
Sbjct: 251 TSALLACTKL--VDGKAIHARIVSSNM--ESDFVGSALINMYARCGDVSSARQAFEKIQN 306
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
K V+ ++S++TA+ +EALD++ +M +EG+ + VT++ L AC+ G +++G
Sbjct: 307 KHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEG--- 363
Query: 369 FELMTRVF--GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ +RVF G + L H T ++ + + G+L+ A ++ + + W A++ A
Sbjct: 364 KAIHSRVFECGFQSLVVH-TALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISA 419
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN-KD 310
+ C +LG + ++ +H+ R ++ N LI M+ CG + LA F + K
Sbjct: 49 LQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKA 108
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH-GGLVEDGCKQF 369
V Y+ M++A+ +G AL+++ +M EG EP+++T+ VL +CS G L E
Sbjct: 109 VACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHA 168
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
++ I+ +V++ G+ G +E+A + K+ DA +W +++ +
Sbjct: 169 SIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNR-DAVSWTSMISS 221
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/581 (29%), Positives = 281/581 (48%), Gaps = 105/581 (18%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPK 64
L+ KT L+ +H+ ++KT H+ + ++ + + P D L YA VF+ I +
Sbjct: 8 LLHNCKTLQSLRMIHAQMIKT--GLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--- 121
+W ++ R H L + ++ LY M LG+L + +TF +L +CA+ + E
Sbjct: 66 -PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQ 124
Query: 122 -------------------------------------------------AVICGYTKIGL 132
A+I GY G
Sbjct: 125 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 184
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN---------SV--- 180
+ AQ++FD + ++V+SW+AM++GYA GN K A E + M + N SV
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 244
Query: 181 --------------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCW 213
+W+ A+I Y KCGEV A +F+ +S D W
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 304
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+ Y K A+ +++ M + ++V M+ + AC LG +E+ + ++++
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 364
Query: 274 GCCDRTNYVSNA------LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
R V+NA LI M++KCG ++ A + F I N+ + S+++MI FA HG++
Sbjct: 365 ----RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRA 420
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
A D+F +MR IEP+ +TF+G+L+ACSH G+++ G F M + I P EH C
Sbjct: 421 NAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGC 480
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
M+DLLG SG ++A +I + D W +LL ACK++ N ELGE A++L+++ P+
Sbjct: 481 MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKN 540
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
G+ LL+NIYA+ G+W + ++ ++++ KK PGCS I
Sbjct: 541 PGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSI 581
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 264/482 (54%), Gaps = 21/482 (4%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
N QVH+ + K+ + Y LI + G +++ A +VF + + + W
Sbjct: 163 LNMGTQVHALVSKS---RYSTDVYMGSALIDMYSKCG-SVACAEEVFSGMIE-RNLVTWN 217
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGL 132
SLI + + +++ ++ +M G+ T +SV++ACA + +L E GL
Sbjct: 218 SLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKE---------GL 268
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
A+ + + +++ +A+V YA C + A+ +DRM+ +N V+ +M++GY +
Sbjct: 269 QIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARA 328
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
V+ A+ +F ++++ + W A+ Y QNG + A+ +++++++E++ + +
Sbjct: 329 ASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL 388
Query: 253 SACTQLGDVEMAAILAKHV------DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
SAC L D+ + HV + + +V N+LI M+ KCG ++ R F ++
Sbjct: 389 SACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKM 448
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
K +D +S++++I +A +G EAL +F KM G +P+ VT IGVL ACSH GLVE+G
Sbjct: 449 KERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGR 508
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
F M G+ PL +H TCMVDLLGR+G L +A +LI DA WG+LL ACKV
Sbjct: 509 HYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKV 567
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H N E+G+ AA LLE+ P +G LL+N+YA +G+W D V+ ++ + K PGCS
Sbjct: 568 HGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCS 627
Query: 487 WI 488
WI
Sbjct: 628 WI 629
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 141/255 (55%), Gaps = 6/255 (2%)
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
++ Y C + A++ +DRM ++N+ TW ++I+ K G + EA ++F + EPD W
Sbjct: 56 LIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSW 115
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+M + Q+ + ++E + M +E+ ++E + A+SAC L D+ M + V +
Sbjct: 116 NSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK 175
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
Y+ +ALI M+SKCG + A FS + +++++++S+IT + +G + EAL++
Sbjct: 176 SRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEV 235
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL---TCMVD 390
F++M + G+EP++VT V++AC+ +++G ++ RV + L +VD
Sbjct: 236 FVRMMDSGLEPDEVTLASVVSACASLCALKEG---LQIHARVVKTNKFRDDLVLGNALVD 292
Query: 391 LLGRSGQLEKAHSLI 405
+ + ++ +A +
Sbjct: 293 MYAKCSKVNEARRVF 307
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 174/423 (41%), Gaps = 129/423 (30%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--DNLSYARQVFDQIPKCK 66
RS++ + VH+ +L T Q+ RL+ + G D L AR++FD++P+ +
Sbjct: 27 RSRSARGTRLVHARILMT------QFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQ-R 79
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICG 126
F W SLI SVL
Sbjct: 80 NTFTWNSLI--------------------------------SVL---------------- 91
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK--------- 177
TK G +D+A RLF SM E + SW++MV+G+A + + E++ +M +
Sbjct: 92 -TKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSF 150
Query: 178 -------------NSVTWV-----------------AMIAGYGKCGEVREAKKVFDEISE 207
N T V A+I Y KCG V A++VF + E
Sbjct: 151 GSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIE 210
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
+ W ++ CY QNG A A+E++ M + EV + +SAC L ++ +
Sbjct: 211 RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQI 270
Query: 268 AKHVDEGCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA---- 322
V + R + V NAL+ M++KC ++ A R F R+ ++V+S +SM++ +A
Sbjct: 271 HARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAAS 330
Query: 323 ---------------------------DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
+G+++EAL +F ++ E I P TF +L+A
Sbjct: 331 VKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSA 390
Query: 356 CSH 358
C++
Sbjct: 391 CAN 393
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 196/338 (57%), Gaps = 1/338 (0%)
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
+++++ Y CG++ AA++ +D M K+ ++W +++ Y + ++ A++VF D
Sbjct: 197 NSLISAYVACGDVGAARKVFDEMLVKDVISWTSIVVAYSRIRDMGSAEEVFALCPVKDMV 256
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W AM Y QN A+E ++ M + I EV++ GAISAC QLG V+ AA + +
Sbjct: 257 AWTAMVTGYAQNAMPVKALEAFEQMAVAGMPIDEVSLTGAISACAQLGAVKRAAWVQEIA 316
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+ R V + L+ M++KCG +D A + F + +K+V +YSSMI A HG++ + +
Sbjct: 317 ERNGLGRNVVVGSGLVDMYAKCGLIDEARKVFEGMHDKNVYTYSSMIVGLASHGRANDVI 376
Query: 332 DMFLKM-RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
+F M R +EPN VTFIGVLTACSH G+V++G F M +GI P +H CMVD
Sbjct: 377 ALFNDMVRRADVEPNHVTFIGVLTACSHAGMVKEGRYYFAQMKDRYGILPSADHYACMVD 436
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGN 450
LL RSG + +A L+ G WGALLGAC++H N E+ +IAA HL L PE GN
Sbjct: 437 LLARSGLVTEALDLVKSMTVEPHGGVWGALLGACRIHGNTEVAKIAAEHLFRLEPEGIGN 496
Query: 451 SALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+N AS G+W + ++ ++ KK P SW
Sbjct: 497 YVLLSNTLASAGEWDEVSKLRKLMRIRGLKKDPAVSWF 534
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 240/430 (55%), Gaps = 18/430 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD +P + W ++ + ++ +++LL+ M R V+ ++VL+ CA
Sbjct: 123 ARRVFDGMPD-RDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLSTCA 181
Query: 115 RVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
+L I Y + D++ + V A++ YA+C +M+ A++ Y+R
Sbjct: 182 HTRNLRFGKAIHSYMLVS---------DTLIDAQV--SCALMNMYASCADMEMAEKLYNR 230
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
++EK V M+ GY K G+V A +F+ + D W+AM Y ++ A+ ++
Sbjct: 231 VSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLF 290
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M++ V+ E+ M+ ISAC +G +E A + V+ + + NALI M SKC
Sbjct: 291 HDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSKC 350
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L LA F+ + K+V++++S+ITA A HG + AL +F M++EGI+PN VTF+G+L
Sbjct: 351 GSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLL 410
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC H GLVE+G F++M + + I+P+ EH CMVDLLGR+ L +A LI +
Sbjct: 411 YACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPN 470
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WG+LL AC++H + ELG AA+ +LEL P G LL+NIYA G W D VK
Sbjct: 471 VVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWND---VKEG 527
Query: 474 IS--ETEKKK 481
+S + EKKK
Sbjct: 528 LSKKDYEKKK 537
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 145/338 (42%), Gaps = 56/338 (16%)
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
++GL +R S+ + S AG A+ + E + A++
Sbjct: 61 RVGLPAPGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEV-------DGFVGTALVRA 113
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y CG V +A++VFD + + D W M CY Q + A+ ++ M++ V +V +
Sbjct: 114 YAACGRVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVII 173
Query: 249 VGAISACTQL-----------------------------------GDVEMAAILAKHVDE 273
+S C D+EMA L V E
Sbjct: 174 ATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVSE 233
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+ +S +++ ++K G +++A F+ + KDV+S+S+MI +A+ K EAL++
Sbjct: 234 ----KEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNL 289
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG--CKQFELMTRVFGIKPLTEHLTCMVDL 391
F M+ G++P+++T + V++AC++ G +E F + I P+ L +D+
Sbjct: 290 FHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNAL---IDM 346
Query: 392 LGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVH 427
+ G L A + M K+ TW +++ A +H
Sbjct: 347 FSKCGSLTLALDVFNAMPQKNVV---TWTSIITASAMH 381
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/410 (33%), Positives = 222/410 (54%), Gaps = 38/410 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
P + +I GY+K G +D A+RLFD M R SW++M+A YA+ G + A +DRM
Sbjct: 136 PIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLS 195
Query: 177 --------------------------------------KNSVTWVAMIAGYGKCGEVREA 198
+N + A++ Y KC + +A
Sbjct: 196 EGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDA 255
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
++ FD +S+ D W+ M Y QNG ++E+++ M+ + R +EV +VG ISAC QL
Sbjct: 256 RREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQL 315
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G E+ + + + T+Y+ +ALI M+++CG++ A FSR++ K VI+++SMI
Sbjct: 316 GSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMI 375
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
A +G +++A+ ++ KM G++PN++TF+ +L AC+H GLV+ G FE M R +
Sbjct: 376 RGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLV 435
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P EH C+VDLL +SG L +A+ I D + +A W LL +C+ H + EL ++A+R
Sbjct: 436 SPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASR 495
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL + P+ + LL+NIYA G W D+ ++ ++ +K SWI
Sbjct: 496 KLLAMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWI 545
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 188/388 (48%), Gaps = 42/388 (10%)
Query: 48 PGDNLSYARQVFDQIPK-----CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTS 102
P AR +FD +P+ C T FL +SL R H + ++ MHR G
Sbjct: 16 PATTSRAARNLFDAVPRPAPALCST-FL-SSLSRASSHHDLLQT----FSSMHRKGAYVP 69
Query: 103 GFTFSSVLNACARVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
V +CA S + V C GL+ D V +A+V YA
Sbjct: 70 SGCVPLVFKSCALTASSCQGRQVHCHALVRGLLGD------------VFVLTALVDFYAK 117
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
G+M++A +D M K+ + +I GY K G+V +A+++FD + ++ W +M CY
Sbjct: 118 NGDMESAVSAFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACY 177
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
G + A+ ++ M E R + + + S C + GD++ + + E D N
Sbjct: 178 AHGGEFREALALFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGED--DLQN 235
Query: 281 Y-VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
V AL+ M+ KC +D A REF R+ +DV+++S+MI +A +G+ E+L++F +M+
Sbjct: 236 VIVHTALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKA 295
Query: 340 EGIEPNQVTFIGVLTACSHGG---LVEDGCKQFELMTRVFGIKPLTEHL-TCMVDLLGRS 395
PN+VT +GV++AC+ G LVE + R+ PLT +L + ++D+ R
Sbjct: 296 TDCRPNEVTLVGVISACAQLGSDELVEQ-IGNYAENQRL----PLTSYLGSALIDMYTRC 350
Query: 396 GQLEKAHSLI--MDYKDFCDAGTWGALL 421
G + +A S+ M+ K TW +++
Sbjct: 351 GHVGRARSVFSRMEQKGVI---TWNSMI 375
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VF ++ + K W S+IR ++ +I LY KM GV + TF ++L AC
Sbjct: 356 ARSVFSRMEQ-KGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAAC- 413
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKE 169
T GL+D F+ M +++S + +V G + A +
Sbjct: 414 -------------THAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYK 460
Query: 170 FY-DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI--SEPD-ASCWAAMTVCYVQNGY 225
F D E N+V W +++ +V AK ++ EPD +S + ++ Y G
Sbjct: 461 FICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGL 520
Query: 226 AKAAIEMYKVMRQENVR 242
A E+ +MR +NV+
Sbjct: 521 WGDAREIRDLMRSKNVQ 537
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 256/500 (51%), Gaps = 69/500 (13%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV- 116
+F++ F W S+I +++ ++ M +L + + TF + +C+ +
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 117 ------------------PSLL--EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
P L A++ Y+K G + DA+ LFD ++ RN++SW++M+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 157 GYANCGNMKAA----KEFY--------------------------DRMTEKNSVTWV--- 183
GY + A KEF R++EK+ V
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286
Query: 184 --------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++ Y KCGE+ +++VFD ++E D W ++ Y QNG + +
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346
Query: 230 IEMY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
+E++ ++++ + + V + + AC G + + V + + +V ++I
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG +++A + F R++ K+V S+S+M+ + HG ++EAL++F +M G++PN +T
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 466
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+ VL ACSH GL+E+G F+ M+ F ++P EH CMVDLLGR+G L++A LI
Sbjct: 467 FVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM 526
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
K D WGALLGAC++H N +LGEI+AR L EL P+ G LL+NIYA G+W+D E
Sbjct: 527 KLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVE 586
Query: 469 IVKMMISETEKKKSPGCSWI 488
+++++ + K PG S +
Sbjct: 587 RMRILMKNSGLVKPPGFSLV 606
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+ FD++ + K W++++ + +H H ++++ ++ +M+ GV + TF SVL AC+
Sbjct: 417 ARKAFDRMRE-KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS 475
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKAAKE 169
GL+++ F +M+ E V + MV G +K A +
Sbjct: 476 HA--------------GLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFD 521
Query: 170 FYDRMT-EKNSVTWVAMIAGYGKC--------GEVREAKKVFDEISEPDASCWAAMTVCY 220
M + V W A++ G C GE+ A+K+F E+ + + ++ Y
Sbjct: 522 LIKGMKLRPDFVVWGALL---GACRMHKNVDLGEI-SARKLF-ELDPKNCGYYVLLSNIY 576
Query: 221 VQNGYAKAAIEMYKVMRQENV 241
G + M +M+ +
Sbjct: 577 ADAGRWEDVERMRILMKNSGL 597
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 239/434 (55%), Gaps = 7/434 (1%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR F++I + +W ++I +V ++ L+ +M + FTF+S+L+ACA
Sbjct: 249 ARSAFEEI-DGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACA 307
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
L I L D + E + +A+V Y+ G + A + +D M
Sbjct: 308 NAGFFLHGKSVHGQFIRLQPD------FVPEAALPVNNALVTLYSKSGKIAVATKIFDSM 361
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
T K+ V+W +++GY + G + A ++F E+ W M YV G A+ A++++
Sbjct: 362 TLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFN 421
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
MR E+V+ + GA++AC +LG ++ L H+ + + +N NAL+ M+++CG
Sbjct: 422 QMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCG 481
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A F + N D +S+++MI+A HG +EAL++F +M +GI P++++F+ +LT
Sbjct: 482 AVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILT 541
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC+H GLV+DG + FE M R FGI P +H ++DLLGR+G++ +A LI
Sbjct: 542 ACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTP 601
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
W A+L C+++ + ELG AA L ++ PE G LL+N Y++ G+W D+ V+ ++
Sbjct: 602 AIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLM 661
Query: 475 SETEKKKSPGCSWI 488
+ KK PGCSWI
Sbjct: 662 RDRGVKKEPGCSWI 675
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 48/318 (15%)
Query: 152 SAMVAGYANC---GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP 208
+A++A Y C G + A++ D M EK+ +TW ++ G+ + G+V A+ F+EI
Sbjct: 200 NALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGE 259
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV------- 261
W AM YVQ+G A E+++ M + + E +SAC G
Sbjct: 260 FDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVH 319
Query: 262 -EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS---- 316
+ + V E V+NAL+ ++SK G + +A + F + KDV+S+++
Sbjct: 320 GQFIRLQPDFVPEAALP----VNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSG 375
Query: 317 ---------------------------MITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
M++ + G +++AL +F +MR+E ++P T+
Sbjct: 376 YIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTY 435
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
G + AC G ++ G KQ G + ++ + R G ++ A + +
Sbjct: 436 AGAVAACGELGALKHG-KQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMP 494
Query: 410 DFCDAGTWGALLGACKVH 427
+ D+ +W A++ A H
Sbjct: 495 N-VDSVSWNAMISALGQH 511
>gi|195651797|gb|ACG45366.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 244/441 (55%), Gaps = 26/441 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR+ FD++P + + +L+ + + ++ L+ M +T
Sbjct: 107 LADARRAFDEMPD-RNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVT---------- 155
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKAAKE 169
+I G+ + G M +A+R F++ R V++W+ +V GY G+M+ A+E
Sbjct: 156 --------WATLIRGFAEKGDMAEARRWFEATPPGMRTVVTWTVLVQGYVCAGDMETARE 207
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+DRM +N+ W +M+ GY K G+ EA+ VFD I + W A+ Y Q G ++ A
Sbjct: 208 VFDRMPARNAFVWSSMVTGYFKAGDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQA 267
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+E + +M QE V+ E M +SAC QLG +E + +++ + ++V N LI M
Sbjct: 268 LEAFHLMLQERVKPDEFTMASLLSACAQLGSLEQGKKVHDFINQEHIRKNHFVMNGLIDM 327
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG L A F ++ K+ +++MI+A A HG+S EAL +F +M G +PN +T
Sbjct: 328 YAKCGDLAHARYIFDSMRWKNNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITV 387
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ VL AC+HGG V++G + F + +G+ EH C+VDLLGR+G+L++A+ ++ +
Sbjct: 388 LAVLGACTHGGFVDEGLQIFNKLD-AYGVGAGVEHYGCLVDLLGRAGKLKEAYEIVNNMS 446
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP-EKTGNSA---LLANIYASMGKWK 465
+ + WG+LLGAC+VH +AE+ + +L L + N A +LANI A+ +W+
Sbjct: 447 EEPNEVIWGSLLGACRVHRDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWE 506
Query: 466 DSEIVKMMISETEKKKSPGCS 486
+E ++ ++ +K+PGCS
Sbjct: 507 QAEQMRRKMARRGVEKTPGCS 527
>gi|356507694|ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 535
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 256/493 (51%), Gaps = 39/493 (7%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
+LKQV + + K H + A+ + P NLS+A +F Q F+ ++
Sbjct: 20 ELKQVQAIITKA--GLHSHLPFTAKLIFFSALSPMGNLSHAHSLFLQ-TSMHNSFICNTM 76
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV------------------ 116
IR ++ Q++ +Y MH V++ FT++ VL AC+R
Sbjct: 77 IRAFANSSYPLQALYIYNHMHTTNVVSDHFTYNFVLKACSRAHKFAQEFVKCDEFIIISK 136
Query: 117 ----------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
PS+ +++C Y++ GL+ AQ LFD ++ R+++SW+ M++ Y
Sbjct: 137 GGEVHCTVLKLGLDQDPSIQNSLLCMYSQCGLVHVAQHLFDEISNRSLVSWNIMISAYDR 196
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
+ K+A + M KN V+W +I Y + G++ A++VF + + DA W ++
Sbjct: 197 VNDSKSADYLLESMPHKNVVSWNTVIGRYIRLGDIEGARRVFQIMPQRDAVSWNSLIAGC 256
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
V + A+ ++ M+ VR +EV ++ + AC + G +EM + + + +
Sbjct: 257 VSVKDYEGAMGLFSEMQNAEVRPTEVTLISVLGACAETGALEMGSKIHESLKACGHKIEG 316
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN- 339
Y+ NAL++M+SKCG L+ AW F+ ++ K + +++MI A HG +EAL +F +M +
Sbjct: 317 YLGNALLNMYSKCGKLNSAWEVFNGMRIKTLSCWNAMIVGLAVHGYCEEALQLFSEMESG 376
Query: 340 -EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
+ + PN+VTF+GVL ACSH GLV+ F+ M + + I P +H C+VDLL R G L
Sbjct: 377 LDTVRPNRVTFLGVLIACSHKGLVDKARWNFDHMAKQYKILPDIKHYGCIVDLLSRFGLL 436
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
E+AH +I A W LLGAC+ N EL +++ + L +LG G+ LL+NIY
Sbjct: 437 EEAHQMIKTAPLQNSAILWRTLLGACRTQGNVELAKVSFQQLAKLGRLTDGDYVLLSNIY 496
Query: 459 ASMGKWKDSEIVK 471
A +W + E V+
Sbjct: 497 AEAERWDEVERVR 509
>gi|242080473|ref|XP_002445005.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
gi|241941355|gb|EES14500.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
Length = 679
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 255/460 (55%), Gaps = 26/460 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR++F+ +P+ + WTS+IR +V H +R +LL+ M R GV + T S VL+
Sbjct: 214 VSEARRLFEAMPE-RNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLD 272
Query: 112 ACARVP---------------------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
CA+ L +++I Y++ G M DA+ LF M +++++S
Sbjct: 273 GCAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVS 332
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
W++++ GY ++ A + M EK++++W +M+ G+ G +RE+ ++F+++ D
Sbjct: 333 WNSLITGYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDE 392
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
WAA+ V NG +A+ + M QE R + VA +SA L + +
Sbjct: 393 IAWAAVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAY 452
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ V +L+ M++KCG L A R FS I + +I+ +SMITAFA HG +++A
Sbjct: 453 AVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLAEDA 512
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
+F +M+ +G PN VTF+G+LTAC+ GLV+ G FE M V+GI+P +H TCMVD
Sbjct: 513 FKLFNRMQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVD 572
Query: 391 LLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKT 448
LLGR+G L +A + M KD+ DA W LL + +H N +L ++AA+ LLE+ P
Sbjct: 573 LLGRAGFLNEALEMTNSMPQKDYPDA--WKVLLSSSSLHSNLDLAKLAAQRLLEIDPYDA 630
Query: 449 GNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L+N+++S G +D E+VK+ KSPG S I
Sbjct: 631 TAYTVLSNMFSSAGMKEDEEMVKVAQLSNMASKSPGYSLI 670
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 163/331 (49%), Gaps = 18/331 (5%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
L A++ Y + G + DAQ+LFD M R+VISW+A++ YA+ GN+ +A+ +D M +N+
Sbjct: 44 LNALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNA 103
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W A+++ Y + G A +F + +A + A+ + G + A +Y M
Sbjct: 104 ASWNALVSLYLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPR 163
Query: 240 -NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+ AM+ +LG +A V +G R +A++ K G +
Sbjct: 164 WRDPVGSNAMIWGYLRGGELG-------MALRVFDGMAARDVISWSAMVDGLCKYGTVSE 216
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A R F + ++V+S++SMI + HG ++ L +FL MR EG++ N +T VL C+
Sbjct: 217 ARRLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQ 276
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--IMDYKDFCDAGT 416
LV++G + LM R+ G ++ + R G + A SL M+ KD +
Sbjct: 277 ASLVDEGSQVHCLMIRM-GFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIV---S 332
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEK 447
W +L+ +V ++ E A L +L PEK
Sbjct: 333 WNSLITG---YVQNDMIE-DAHVLFKLMPEK 359
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 154/340 (45%), Gaps = 57/340 (16%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLI-------RNHVLHAHFRQSILLYAKMHRLGVLTSG 103
NL+ AR VFD +P + W +L+ R HA F ++ A + G + +G
Sbjct: 87 NLASARFVFDDMP-LRNAASWNALVSLYLRAGRPAAAHALFCKAPAKNAVSY--GAIITG 143
Query: 104 FTFSSVLNACA----------RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L R P A+I GY + G + A R+FD MA R+VISWSA
Sbjct: 144 LARAGMLREAQAVYWEMPPRWRDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSA 203
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
MV G G + A+ ++ M E+N V+W +MI GY K G R+ +F +
Sbjct: 204 MVDGLCKYGTVSEARRLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLD--------- 254
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV-EMAAILAKHVD 272
MR+E V+++ + + + C Q V E + + +
Sbjct: 255 ----------------------MRREGVQVNMITLSVVLDGCAQASLVDEGSQVHCLMIR 292
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
G + ++ ++LI M+S+ G + A FS + KD++S++S+IT + + ++A
Sbjct: 293 MGFAEDI-FLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLITGYVQNDMIEDAHV 351
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+F M E + +++ ++ ++ G + + + FE M
Sbjct: 352 LFKLMP----EKDAISWTSMVVGFANRGWMRESVELFEQM 387
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/546 (30%), Positives = 270/546 (49%), Gaps = 65/546 (11%)
Query: 8 PRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGD-NLSYARQVFDQIP- 63
PR + Q+H+ LLK+ +T D +H + +LSYA ++F P
Sbjct: 71 PRRAALRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPH 130
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSL--- 119
++ + LIR+ + H ++ L+ +M V T ++ + +C+R+ L
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 120 ------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
L ++I Y G + A LF ++ + VI+W+AM+AGY
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 162 GNMKAAKEFYD----------------------RMTEKNSVTWVA--------------- 184
G+ K E + R+ + N W+A
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 185 --MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
++ Y KCGE+ +A+++FD + D W+AM Y Q+ + A+ ++ M+ V
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
++V MV +SAC LG +E + ++ T + AL+ ++KCG + A +
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + ++ +++++I A +G+S+EAL++F M IEP VTFIGVL ACSHG LV
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G + F MT+ +GI P EH CMVDLLGR+G +++A+ I + +A W ALL
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC VH N E+GE A + ++ L P +GN LL+N YAS+G+WK++ +V+ + E +K
Sbjct: 551 ACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKI 610
Query: 483 PGCSWI 488
PGCS I
Sbjct: 611 PGCSLI 616
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 255/476 (53%), Gaps = 31/476 (6%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
L+ L GD +S +R FDQIP+ K + W S+I +V + HF ++I + ++ + +
Sbjct: 57 LVNLYANLGD-VSLSRCTFDQIPQ-KDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 114
Query: 101 TSGF-TFSSVLNACARVPS------------------LLEAVICGYTKIGLMDDAQRLFD 141
F TF VL AC + + ++I Y++ G A+ LFD
Sbjct: 115 RPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 174
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIA----GYGKCG 193
M R++ SW+AM++G GN A + D M + N VT V+++ Y K G
Sbjct: 175 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLG 234
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ-ENVRISEVAMVGAI 252
+ A KVF+ I D W + Y QNG A AIE+YK+M + + + ++ V +
Sbjct: 235 LLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 294
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
A +G ++ + V + +V+ LI ++ KCG L A F ++ + +
Sbjct: 295 PAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV 354
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+++++I+ HG +++ L +F +M +EG++P+ VTF+ +L+ACSH G VE+G F LM
Sbjct: 355 TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM 414
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+GIKP +H CMVDLLGR+G LE A+ I D DA WGALLGAC++H N EL
Sbjct: 415 QE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIEL 473
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
G+ A+ L E+ + G LL+NIYA++GKW+ + V+ + E KK+PG S I
Sbjct: 474 GKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 529
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK-MRN 339
++S L+++++ G + L+ F +I KDV +++SMI+A+ +G EA+ F + +
Sbjct: 52 FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLV 111
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDG----CKQFELMTRVFGIKPLTEHLTCMVDLLGRS 395
I P+ TF VL AC G + DG C F+L G + ++ + R
Sbjct: 112 SEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKL-----GFQWNVFVAASLIHMYSRF 163
Query: 396 GQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
G A SL D F D G+W A++ + NA
Sbjct: 164 GFTGIARSLFDDMP-FRDMGSWNAMISGLIQNGNA 197
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 264/533 (49%), Gaps = 67/533 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+HSYLLK Y + + L + ++ A Q+FD + LW ++
Sbjct: 264 KQLHSYLLKAGM----SLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNV-VLWNLMLV 318
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA---------RVPSLL------- 120
+ +S ++ +M GV + FT+ +L C ++ SL
Sbjct: 319 AYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQS 378
Query: 121 -----EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN--------------- 160
+I Y+K G +D AQR+ D + E++V+SW++M+AGY
Sbjct: 379 DMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQ 438
Query: 161 -----------------CGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKCGEVR 196
C +KA + Y + W ++ Y +CG +
Sbjct: 439 ACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISK 498
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
EA F+ I + W + + Q+G + A++++ M Q + + V +ISA
Sbjct: 499 EAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASA 558
Query: 257 QLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
L D++ I A+ + G T +SNALI ++ KCG ++ A +F + ++ +S++
Sbjct: 559 NLADIKQGKQIHARVIKTGYTSETE-ISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWN 617
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
++IT + HG+ EALD+F +M+ +G++P+ VTF+GVLTACSH GLVE+G F+ M+
Sbjct: 618 TIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNE 677
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
GI P +H C+VD+LGR+GQL++A + + D+ W LL ACKVH N E+GE
Sbjct: 678 HGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEF 737
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA+HLLEL P + + LL+N YA GKW + ++ ++ + +K PG SWI
Sbjct: 738 AAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWI 790
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 170/409 (41%), Gaps = 62/409 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VF+++ + W +++ + + +++ LY +MHR GV+ + + SS+L+AC
Sbjct: 96 ARRVFEEL-SVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACT 154
Query: 115 RVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ A+I Y + A R+F M + ++++
Sbjct: 155 KTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNT 214
Query: 154 MVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG--------------------- 188
+++G+A CG+ A +D M +SVT +++A
Sbjct: 215 LISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAG 274
Query: 189 --------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y K G++ EA ++FD + W M V Y Q + +++
Sbjct: 275 MSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFY 334
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M VR ++ + CT G++ + + + YVS LI M+SK G
Sbjct: 335 RMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYG 394
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+LD A R I+ KDV+S++SMI + H +EAL+ F +M+ GI P+ + ++
Sbjct: 395 WLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAIS 454
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
AC+ V G Q V G +V L R G ++A S
Sbjct: 455 ACAGIKAVHQG-SQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFS 502
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y K G VR A++VF+E+S D W A+ Y QNG + A+ +Y+ M + V +
Sbjct: 83 LIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPT 142
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ +SACT+ ++ ++ V + +V NALI ++ +C LA R F
Sbjct: 143 PYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFC 202
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+ D ++++++I+ A G AL +F +M+ G+ P+ VT +L ACS G +
Sbjct: 203 DMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRK 262
Query: 365 GCKQFE--LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
G KQ L+ + + E ++DL +SG +E+A I D D + W +L
Sbjct: 263 G-KQLHSYLLKAGMSLDYIME--GSLLDLYVKSGDIEEALQ-IFDSGDRTNVVLWNLMLV 318
Query: 423 A 423
A
Sbjct: 319 A 319
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 168/399 (42%), Gaps = 63/399 (15%)
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACA----RVPSLLE----AVICG--------------Y 127
L+A R ++ F+ L AC R P + E A+ICG Y
Sbjct: 28 LFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLY 87
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV------- 180
K G + A+R+F+ ++ R+ +SW A+++GYA G + A Y M V
Sbjct: 88 AKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLS 147
Query: 181 ------------------------------TWV--AMIAGYGKCGEVREAKKVFDEISEP 208
T+V A+I+ Y +C R A +VF ++
Sbjct: 148 SILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYC 207
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
D+ + + + Q G+ A+ ++ M+ + V + ++AC+ +GD+ L
Sbjct: 208 DSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLH 267
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
++ + + +L+ ++ K G ++ A + F +V+ ++ M+ A+
Sbjct: 268 SYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLA 327
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
++ D+F +M G+ PN+ T+ +L C+H G + G +Q +T G + +
Sbjct: 328 KSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLG-EQIHSLTIKNGFQSDMYVSGVL 386
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+D+ + G L+KA I+D + D +W +++ H
Sbjct: 387 IDMYSKYGWLDKAQR-ILDMIEEKDVVSWTSMIAGYVQH 424
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 8/191 (4%)
Query: 270 HVDEGCCDRTNY--VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
H C + Y + N LI +++K G++ A R F + +D +S+ ++++ +A +G
Sbjct: 65 HAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLG 124
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+EA+ ++ +M G+ P +L+AC+ L + G + + G T
Sbjct: 125 EEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLG-RLIHVQVYKQGFFSETFVGNA 183
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA---CKVHVNAELGEIAARHLLELG 444
++ L R A + D +CD+ T+ L+ C H + LG L L
Sbjct: 184 LISLYLRCRSFRLADRVFCDML-YCDSVTFNTLISGHAQCG-HGDRALGIFDEMQLSGLS 241
Query: 445 PEKTGNSALLA 455
P+ ++LLA
Sbjct: 242 PDSVTIASLLA 252
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 253/505 (50%), Gaps = 72/505 (14%)
Query: 56 RQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR 115
R +F + + + W S+I + Q++ ++ M +L + + TF + +C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 116 VPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
+ L A+I Y+K G ++DA++LFD + ERNV+SW++M
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 155 VAGYANCGNMKAA----KEF-------YDRMTEK---------------------NSVTW 182
++GY + A KEF YD + SVT
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 183 VA------------------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
++ Y KCGE+ ++KVFD + E D W ++ Y QNG
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 225 YAKAAIEMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
+ A ++ M ++ VR + V + + AC G +++ + V + + V
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVG 338
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
+++ M+ KCG +++A + F R+K K+V S++ M+ + HG +EA+ +F +M GI+
Sbjct: 339 TSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIK 398
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
PN +TF+ VL ACSH GL+++G F M F ++P EH +CMVDLLGR+G L++A+
Sbjct: 399 PNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYG 458
Query: 404 LIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGK 463
LI + K D WG+LLGAC++H N ELGEI+AR L +L P G LL+NIYA G+
Sbjct: 459 LIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGR 518
Query: 464 WKDSEIVKMMISETEKKKSPGCSWI 488
W D E +++++ K+PG S +
Sbjct: 519 WDDVERMRILMKNHGLLKTPGYSIV 543
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVL 110
+S +R+VFD + + W SLI + + ++ L++ M + G V + T S+VL
Sbjct: 249 ISVSRKVFDGMEETDV-CSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVL 307
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
ACA L+ C + ++ M+ E N++ +++V Y CG ++ A++
Sbjct: 308 LACAH-SGALQIGKCIHDQVVKME---------LEDNLVVGTSIVDMYCKCGRVEMARKA 357
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+DR+ KN +W M+AGYG G +EA KVF E+
Sbjct: 358 FDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEM 392
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+ FD++ + K WT ++ + +H H ++++ ++ +M R G+ + TF SVL AC+
Sbjct: 354 ARKAFDRLKR-KNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSM-----AERNVISWSAMVAGYANCGNMKAAKE 169
GL+ + F+ M E + +S MV G +K A
Sbjct: 413 HA--------------GLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYG 458
Query: 170 FYDRMTEK-NSVTWVAMIAGYGKC--------GEVREAKKVF 202
M K + + W +++ G C GE+ A+K+F
Sbjct: 459 LIQEMKVKPDFIVWGSLL---GACRIHKNVELGEI-SARKLF 496
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 165/543 (30%), Positives = 270/543 (49%), Gaps = 61/543 (11%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTL--TKPHDQYHYYAQ----FLIRLLQLPGDNLSYARQVF 59
L+ +SKT L Q+H+++L+ T P+ + A L+ L P + +AR++F
Sbjct: 158 LLQQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMF 217
Query: 60 DQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-SGFTFSSVLNACARVPS 118
D P FL S+I+ +V + +S LY + R T FTFS + +CA +
Sbjct: 218 DHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMA 277
Query: 119 LLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
+ E A++ Y K G MD A++LFD M +R+ +SW+A++ G
Sbjct: 278 IWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGG 337
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
Y G+M A + +D+M EK+S + MI Y K G++ A+K+FDE+ E W M
Sbjct: 338 YVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMI 397
Query: 218 VCYVQNGYAKAAIEMYKVMRQEN--------------------------------VRISE 245
Y NG +A ++ M ++N + E
Sbjct: 398 YGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDE 457
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
V +V + A LG +++ + + V DR V ALI M++KCG + + F
Sbjct: 458 VTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDN 517
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ K+ S++++I AFA +G+++EAL +F++M ++G PN++T IGVL+AC+H GLVE+G
Sbjct: 518 MPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEG 577
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F+ M FG+ P EH CMVDLLGR+G L++A L+ + + L AC
Sbjct: 578 KRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACG 636
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+ E + +++ GN +L N+YA+ +WK+++ VK ++ KK GC
Sbjct: 637 YSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGC 696
Query: 486 SWI 488
S I
Sbjct: 697 SAI 699
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 256/496 (51%), Gaps = 34/496 (6%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLI--RLLQL---------PGDNLSY 54
L+ +F+ LK +H +LL+T H + + RLL L P + L Y
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRT--------HLISDVFVASRLLALCVDDSTFNKPTNLLGY 69
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +F QI F++ LIR A ++ Y +M + + TF ++ A +
Sbjct: 70 AYGIFSQIQN-PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS 128
Query: 115 RVPSLL--EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ +L E + G +D V +++V YANCG + AA +
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQND------------VYVENSLVHMYANCGFIAAAGRIFG 176
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+M ++ V+W +M+AGY KCG V A+++FDE+ + W+ M Y +N + AI++
Sbjct: 177 QMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDL 236
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
++ M++E V +E MV IS+C LG +E ++V + + AL+ M +
Sbjct: 237 FEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWR 296
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG ++ A F + D +S+SS+I A HG + +A+ F +M + G P VTF V
Sbjct: 297 CGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAV 356
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+ACSHGGLVE G + +E M + GI+P EH C+VD+LGR+G+L +A + I+
Sbjct: 357 LSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKP 416
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
+A GALLGACK++ N E+ E L+++ PE +G LL+NIYA G+W E ++
Sbjct: 417 NAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRD 476
Query: 473 MISETEKKKSPGCSWI 488
M+ E KK PG S I
Sbjct: 477 MMKEKLVKKPPGWSLI 492
>gi|334184919|ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
gi|218546767|sp|O22137.2|PP202_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g45350, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
Length = 613
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 234/439 (53%), Gaps = 19/439 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +RQ+FD++PK + + S+I +V + G++ S ++
Sbjct: 172 LGLSRQMFDRMPK-RDSVSYNSMIDGYV----------------KCGLIVSARELFDLMP 214
Query: 112 ACARVPSLLEAVICGYTKIGL-MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+ ++I GY + +D A +LF M E+++ISW++M+ GY G ++ AK
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 274
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D M ++ VTW MI GY K G V AK +FD++ D + +M YVQN Y A+
Sbjct: 275 FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEAL 334
Query: 231 EMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
E++ M +E ++ + +V + A QLG + A + ++ E + ALI M
Sbjct: 335 EIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDM 394
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+SKCG + A F I+NK + +++MI A HG + A DM L++ ++P+ +TF
Sbjct: 395 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITF 454
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL ACSH GLV++G FELM R I+P +H CMVD+L RSG +E A +LI +
Sbjct: 455 VGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 514
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+ W L AC H E GE+ A+HL+ + LL+N+YAS G WKD
Sbjct: 515 VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRR 574
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ M+ E + +K PGCSWI
Sbjct: 575 VRTMMKERKIEKIPGCSWI 593
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 218/369 (59%), Gaps = 1/369 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
AV+ + M A+RLFD + +V+ W+ +V+GY G+M AA+E +DRM + + ++
Sbjct: 30 AVVAAHVACHDMVSARRLFDLAPQCDVVLWNVIVSGYIELGDMVAARELFDRMPDCDVMS 89
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +++GY GEV KVF+E+ + W + YV+NG K A+E +K M + V
Sbjct: 90 WNTVLSGYANNGEVELFVKVFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGV 149
Query: 242 RI-SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+ ++ +V +SAC++LGD+E+ + + D +V NALI M++KCG ++ A
Sbjct: 150 VVPNDYTVVAVLSACSRLGDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKAL 209
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F + KD+I+++++I + A H + +AL +F M+ G P+ VTF+G+L+AC+H G
Sbjct: 210 DVFDGLDVKDIITWNTIINSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMG 269
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LV +G F+ M + I P EH CMVDLLGR+G + +A ++ D W AL
Sbjct: 270 LVRNGFLHFQSMVDDYLIVPQIEHYGCMVDLLGRAGLINQAVDIVRKMPMEPDVVIWAAL 329
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
LGAC+ + N E+ E+A + L+EL P GN +L+NIY +G+ +D +K+ + +T +
Sbjct: 330 LGACRXYKNVEMAELALQRLIELEPNNPGNFVMLSNIYKDLGRSQDVARLKVAMRDTGFR 389
Query: 481 KSPGCSWIS 489
K PGCS I
Sbjct: 390 KVPGCSVIG 398
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 11/237 (4%)
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V +A KVF E+ + + W A+ +V +A ++ + Q +V + V + G I
Sbjct: 10 VADAYKVFAEMRDKNVFAWTAVVAAHVACHDMVSARRLFDLAPQCDVVLWNVIVSGYI-- 67
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
+LGD+ A L + + CD ++ N ++ ++ G ++L + F + ++V S+
Sbjct: 68 --ELGDMVAARELFDRMPD--CDVMSW--NTVLSGYANNGEVELFVKVFEEMPARNVYSW 121
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
+ +I + +G +EAL+ F +M +G + PN T + VL+ACS G +E G K +
Sbjct: 122 NGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEIG-KWVHVYA 180
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
G K ++D+ + G +EKA + D D D TW ++ + +H +A
Sbjct: 181 DSIGYKGNLFVGNALIDMYAKCGVIEKALD-VFDGLDVKDIITWNTIINSLAMHXHA 236
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 125/335 (37%), Gaps = 109/335 (32%)
Query: 55 ARQVFDQIPKC------------------------------KTQFLWTSLIRNHVLHAHF 84
AR++FD++P C + + W LI +V + F
Sbjct: 75 ARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVYSWNGLIGGYVRNGLF 134
Query: 85 RQSILLYAKMHRLGVLT-SGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSM 143
++++ + +M GV+ + +T +VL+AC+R+ L +IG DS+
Sbjct: 135 KEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDL---------EIGKW--VHVYADSI 183
Query: 144 AER-NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVF 202
+ N+ +A++ YA CG ++ A + +D + K+ +TW +I
Sbjct: 184 GYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNTIINSLA------------ 231
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+ +A A+ +++ M++ R V VG +SACT +G
Sbjct: 232 -------------------MHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMG--- 269
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKC-GYLDLAWREFSRIKNKDVISYSSMITAF 321
V N +H S YL + E Y M+
Sbjct: 270 ------------------LVRNGFLHFQSMVDDYLIVPQIE----------HYGCMVDLL 301
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
G +A+D+ KM +EP+ V + +L AC
Sbjct: 302 GRAGLINQAVDIVRKMP---MEPDVVIWAALLGAC 333
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 231/424 (54%), Gaps = 40/424 (9%)
Query: 98 GVLTSGFTFSSVLNACARVPSLL--EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
G L + V +CA V ++ VI GY K G M+ A+R+FD M RN +SWS MV
Sbjct: 141 GALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMV 200
Query: 156 AGYANCGNMKAAKEFYDRMTE--KNSVTWVAMIAGYGKCGEVREAKKVFDEIS------- 206
GYA G + A+E +DRM +N VTW +M+ G+ + G + A+K+FDE+
Sbjct: 201 GGYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSW 260
Query: 207 ------------------------EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NV 241
E D W M Y Q G + +E+++ M+ E NV
Sbjct: 261 NAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNV 320
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN--YVSNALIHMHSKCGYLDLA 299
+ +EV MV +SAC L +E + +D+ N + ALI M++KCG D+A
Sbjct: 321 QPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIA 380
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F+ + K+V +++++IT A +G +Q+++D F +M+ G +PN +TF+GVLTACSHG
Sbjct: 381 VKIFNSLDRKNVSAWNALITRLAMNGNAQDSVDAFEQMKRTGEKPNDITFVGVLTACSHG 440
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV++G + F+ M G++P +H CMVD+LGR+G LE+A LI D +GA
Sbjct: 441 GLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGA 500
Query: 420 LLGACKVHVNAELGEIAAR--HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
LLGAC++H ++ E H L L +++G L+++IYA+ GKW D + ++ +
Sbjct: 501 LLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRS 560
Query: 478 EKKK 481
+K
Sbjct: 561 GIRK 564
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 243/443 (54%), Gaps = 27/443 (6%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR +FD+IP+ + +L+ H R + L+A M
Sbjct: 67 LADARHLFDRIPR-PDAVSYNTLLSCHFAAGDVRGARDLFAAM----------------P 109
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE-F 170
A AR + ++ G ++ G + +A+ +F +M RN ISW+AMV+ +A+ G+M AA+E F
Sbjct: 110 ATARNVTSWNTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECF 169
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
D ++N+V W AM++GY G V +A + F+ + W A+ YV+N A+ A+
Sbjct: 170 EDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDAL 229
Query: 231 EMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC----DRTNYVSNA 285
++K M R +VR +E + + C+ L A + V + C R +
Sbjct: 230 WVFKTMVRDADVRPNESTLSSVLLGCSNLS----ALGFGRQVHQWCTKLPLSRRVTAGTS 285
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ M+ KCG LD A + FS ++ +DVI++++MI+ +A HG +EA+++F KM+++G+EPN
Sbjct: 286 LVSMYCKCGDLDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPN 345
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+TF+ VLTAC H G+ + G + FE M V+GI+ +H +CMVDLL R+G LE+A SLI
Sbjct: 346 WITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLERAVSLI 405
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+G LL A +V+ N E E AA L+E P+ G LANIYA +W
Sbjct: 406 RSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYAVANQWA 465
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D V+ + + K+PG SW+
Sbjct: 466 DVSRVRRWMKDNAVVKTPGYSWV 488
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 155/475 (32%), Positives = 254/475 (53%), Gaps = 17/475 (3%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+Q+HS+++K L D + + LI L GD L AR +FD++ K W SLI
Sbjct: 430 EQMHSHVIK-LGFLLDIF--VSNSLIHLYAACGD-LVCARSIFDEM-LVKDVVSWNSLIG 484
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ F++ + L+ M V T V++AC + + D
Sbjct: 485 GYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDW-----------SMADCM 533
Query: 137 QRLFD-SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
R + + E +V + ++ Y G +++A++ + +M +KN+VT AMI Y K G +
Sbjct: 534 VRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNL 593
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
AKK+FD+I D W++M Y Q + ++E+++ M++ V+ V + +SAC
Sbjct: 594 VSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSAC 653
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
LG +++ + +V + N+LI M +KCG + A + F+ ++ KD +S++
Sbjct: 654 AHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWN 713
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
S+I A++G EAL++F M EG PN+VTF+GVL AC++ LV++G FE M V
Sbjct: 714 SIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTV 773
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
++P +H C+V +L R+GQLEKA + I + D W LLGACK H N + E+
Sbjct: 774 HNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEV 833
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
A + L EL P +G+ LL+NIYAS +W D+ V+ +++T +KSP CS + S
Sbjct: 834 ATKKLSELDPSNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSVVDS 888
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 187/347 (53%), Gaps = 32/347 (9%)
Query: 143 MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVF 202
M +NV+SW+ ++ G+A G ++ A+ +D+M +N V+W +I GY +
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTR----------- 49
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+C YA+ A+ +++ M + SE+ ++ + A + LG +
Sbjct: 50 --------ACL-----------YAE-AVALFRHMMAGGISPSEITVLAVVPAISNLGGIL 89
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR-IKNKDVISYSSMITAF 321
M +L + + V N+LI +++K G + + + F + ++++S++S+I+ F
Sbjct: 90 MGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGF 149
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
A HG S EAL++F +MR GI PN++TF+ V+ ACSHGGLVE G F+ M + I P
Sbjct: 150 AMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPE 209
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
+H C++D+LGR+G+L +A +I + W LLG C + E+G+ A + +
Sbjct: 210 IKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMIS 269
Query: 442 ELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L E G+ A+L+N+ +G++ D+E + ++ E + K PG + +
Sbjct: 270 DLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLALV 316
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 163/375 (43%), Gaps = 25/375 (6%)
Query: 57 QVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV 116
+VFD++ + WTS+I +H +++ L+A+M R G+ + TF SV+NAC+
Sbjct: 128 KVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSH- 186
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM-T 175
G + GL +++ + + + ++ G + A++ + +
Sbjct: 187 --------GGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPV 238
Query: 176 EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC---WAAMTVCYVQNGYAKAAIEM 232
E N + W ++ K GEV K+ IS+ + +A ++ + G A +
Sbjct: 239 EVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQA 298
Query: 233 YKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
K++ + V++ +A+V S +E L H+ Y + +I ++
Sbjct: 299 RKLLDERKIVKVPGLALVVTRSFVM----MEAVKKLHAHLVVSGLHNCQYAMSKVIRSYA 354
Query: 292 -KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+ L A + F +I++ +++++ A ++A+ + K + +G++P+ +TF
Sbjct: 355 LQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFP 414
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT--CMVDLLGRSGQLEKAHSLIMDY 408
VL AC+ ++G ++ + V + L + ++ L G L A S I D
Sbjct: 415 FVLKACAKTYAPKEG---EQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARS-IFDE 470
Query: 409 KDFCDAGTWGALLGA 423
D +W +L+G
Sbjct: 471 MLVKDVVSWNSLIGG 485
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ YAR +FDQ+P C+ WT LI + + +++ L+ M G+ S T +V+
Sbjct: 22 IEYARLLFDQMP-CRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVP 80
Query: 112 ACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAE-RNVI 149
A + + +L ++I Y KIG + ++ ++FD M + RN++
Sbjct: 81 AISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLV 140
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
SW+++++G+A G A E + M N +T++++I G V + F +
Sbjct: 141 SWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSM 200
Query: 206 S-----EPDASCWAAMTVCYVQN-GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+P+ + C + G A E +++ V ++ + + C++ G
Sbjct: 201 VYEYNIDPEIKHFG----CIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYG 256
Query: 260 DVEMA 264
+VEM
Sbjct: 257 EVEMG 261
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 222/411 (54%), Gaps = 39/411 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK----------- 165
P +L +++ Y + GL+ AQR+FD M + +SW+A++ Y + G+++
Sbjct: 153 PHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFA 212
Query: 166 -----------------------AAKEFYDRMTEKNSVTWVAMIAG-----YGKCGEVRE 197
A E R E+ + +A Y KCGE+ +
Sbjct: 213 NGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAK 272
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A++VFD++ + DA W AM Y NG+ + A++++ M+ E VR A+ GA+SACT+
Sbjct: 273 AREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTR 332
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
LG +++ + VD + ALI M++KCG AW F +++ KD+I +++M
Sbjct: 333 LGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAM 392
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I G + A + +M G++ N TFIG+L +C+H GL++DG + F MT+++
Sbjct: 393 ILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYH 452
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I P EH C+VDLL R+G L++AH LI D +A GALLG CK+H NAEL E
Sbjct: 453 ISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVL 512
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+ L P +GN +L+NIY++ G+W+D+ +++ + E +K P CSW+
Sbjct: 513 TQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWV 563
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 61/271 (22%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A++VFD++P T WT+LI ++ R+++ + G+ FT VL
Sbjct: 169 LHRAQRVFDEMPHPST-VSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLT 227
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
ACARV L A + Y K G M A+ +FD M +++ ++
Sbjct: 228 ACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVA 287
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEK--------------------------------- 177
W AMV GYA+ G+ + A + + M +
Sbjct: 288 WGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVD 347
Query: 178 ------NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
N V A+I Y KCG EA VF ++ + D W AM + G+ K A
Sbjct: 348 WDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFT 407
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+ M + V++++ +G + +CT G ++
Sbjct: 408 LIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQ 438
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 168/515 (32%), Positives = 262/515 (50%), Gaps = 42/515 (8%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQI-------PK 64
+ LK +HS L H H+ A+ +I +L GD L AR +FD +
Sbjct: 37 SLTTLKLIHSSLSTRGFLLHTP-HFLARLIILYSKL-GD-LHSARTLFDHRHHHHHGHTQ 93
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA-RVPSLLEAV 123
FL +++R + ++I LY M R+GV + FT+ VL CA + ++ V
Sbjct: 94 APNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEV 153
Query: 124 ICG--------------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
+ G Y K G + DA +FD M R+V+ W+AM+ Y
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAER 213
Query: 164 MKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVR----EAKKVFDEISEPDASCWAA 215
A + +M E+ + +T +++ + G+ G+ R A+ VFD + E + W +
Sbjct: 214 PLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNS 273
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
M Y QNG A+ ++ M+ + V + +SAC+ LG + L V
Sbjct: 274 MLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSK 333
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFS--RIKNKDVISYSSMITAFADHGKSQEALDM 333
D + NA++ M+ KCG LD A F+ + +DV S++ +I+ + HG +EAL++
Sbjct: 334 MDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALEL 393
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F +M+ EG+EPN +TF +L+ACSH GL+++G K F MT++ ++P +H CMVD+LG
Sbjct: 394 FSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDMLG 452
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R+G L +A LI WGALL AC++H N ELGEIAA +L +L PE TG L
Sbjct: 453 RAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVL 512
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
++NIYA+ KWK+ E+V+ + KK S I
Sbjct: 513 MSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVI 547
>gi|2583119|gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 234/439 (53%), Gaps = 19/439 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +RQ+FD++PK + + S+I +V + G++ S ++
Sbjct: 165 LGLSRQMFDRMPK-RDSVSYNSMIDGYV----------------KCGLIVSARELFDLMP 207
Query: 112 ACARVPSLLEAVICGYTKIGL-MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+ ++I GY + +D A +LF M E+++ISW++M+ GY G ++ AK
Sbjct: 208 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 267
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D M ++ VTW MI GY K G V AK +FD++ D + +M YVQN Y A+
Sbjct: 268 FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEAL 327
Query: 231 EMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
E++ M +E ++ + +V + A QLG + A + ++ E + ALI M
Sbjct: 328 EIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDM 387
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+SKCG + A F I+NK + +++MI A HG + A DM L++ ++P+ +TF
Sbjct: 388 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITF 447
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL ACSH GLV++G FELM R I+P +H CMVD+L RSG +E A +LI +
Sbjct: 448 VGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 507
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+ W L AC H E GE+ A+HL+ + LL+N+YAS G WKD
Sbjct: 508 VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRR 567
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ M+ E + +K PGCSWI
Sbjct: 568 VRTMMKERKIEKIPGCSWI 586
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 241/439 (54%), Gaps = 15/439 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L YAR VF+QIP T F S+IR + RQ+IL Y M G+ FTF S+
Sbjct: 27 SLPYARLVFNQIPN-PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+C V + + C TK+G DA + ++ Y+NCG + +A++
Sbjct: 86 KSCG-VLCEGKQLHCHSTKLGFASDAY------------IQNTLMNMYSNCGCLVSARKV 132
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAA 229
+D+M K+ V+W MI Y + EA K+F + + CW M +V++ + A
Sbjct: 133 FDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEA 192
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ ++ M+ V+ +V M + ACT LG +E+ L ++++ + + AL+ M
Sbjct: 193 LSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDM 252
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG ++ A R F + KDV++++++I A G+ +AL++F +M+ ++P+ +TF
Sbjct: 253 YAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITF 312
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL ACSH GLV +G F M +GI+P EH CMVD+LGR+G++ +A LI +
Sbjct: 313 VGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 372
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D LL AC++H N + E AA+ L+EL P+ G LL+NIY+SM W+ ++
Sbjct: 373 MAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKK 432
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ E KK PGCS I
Sbjct: 433 MRELMVERNIKKPPGCSAI 451
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 248/442 (56%), Gaps = 22/442 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A+ +F ++P K W ++I V + R+++ L ++HR G + S +F+S L+
Sbjct: 505 LKEAKDLFQKMP-VKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALS 563
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKA 166
ACA + G +IG R+ S+A + N + +++ YA CGN++
Sbjct: 564 ACANI---------GDVEIG------RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVED 608
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
+ + K++V+W ++I+G + + +A+ VF+++ + D W A+ YVQ G+
Sbjct: 609 GSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHG 668
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A++++ M ++ +++ + +SAC LG +++ + + D +V N+L
Sbjct: 669 EVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSL 728
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+ KCGY D + F + D+I++++++ A +G +EA+ +F +M EGI P+Q
Sbjct: 729 ITMYFKCGYED-GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQ 787
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
++F+GVL ACSH GLV++G F MT+ +GI PL H TCMVDLLGR+G L +A +LI
Sbjct: 788 MSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIE 847
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ D+ W ALLGAC++H N ELG+ A L ++ K+ LL+N++AS G W
Sbjct: 848 NMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDK 907
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
++ ++ + K PG SWI
Sbjct: 908 VAEIRKLMKDQGLTKEPGISWI 929
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 205/465 (44%), Gaps = 105/465 (22%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR++FDQ+P+ + W +I +V + + ++ ++ KM R F VL+
Sbjct: 311 MSEARELFDQMPE-RNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLS 369
Query: 112 ACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
A + L A++ YT+ G +D A F++M ERN S
Sbjct: 370 AITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYS 429
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
W+ M+A +A CG + A + Y+R+ E+ T AM+ Y + G +++A+ +FDEI P+
Sbjct: 430 WTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNV 489
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR---------------------------- 242
W A+ Y QNG K A ++++ M +N
Sbjct: 490 VAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRS 549
Query: 243 ---ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD-- 297
S+ + A+SAC +GDVE+ ++ + C +YV N LI M++KCG ++
Sbjct: 550 GSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDG 609
Query: 298 ------------LAWRE-----------------FSRIKNKDVISYSSMITAFADHGKSQ 328
++W F ++ +DV+S++++I+A+ G +
Sbjct: 610 SHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGE 669
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
ALD+FL M GI+PNQ+T +L+AC + G ++ G +QF + G +
Sbjct: 670 VALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG-EQFHALIFKLGFDTFLFVGNSL 728
Query: 389 VDLLGRSGQLEKAHSLIMDYKD-FC--------DAGTWGALLGAC 424
+ + + G Y+D FC D TW A+L C
Sbjct: 729 ITMYFKCG-----------YEDGFCVFEEMPEHDLITWNAVLVGC 762
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 170/349 (48%), Gaps = 54/349 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VF+++ + + W S+I + + ++ LL F + +
Sbjct: 190 ARRVFNEMIQ-RDVVSWNSMINGYSQNGKVDEARLL---------------FDAFVGKNI 233
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
R ++L + GY K G +++A+ +F+SM ERNV+SW+AM++GY G++K A++ +D M
Sbjct: 234 RTWTIL---LTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEM 290
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
EKN +W +++ GY C + EA+++FD++ E ++ W M YV A +++
Sbjct: 291 PEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFV 350
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEM--------------------AAILAKHVDEG 274
M + R + V +SA T L D+E+ +AIL + G
Sbjct: 351 KMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNG 410
Query: 275 CCD-----------RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
D R Y +I ++CG LD A + + R+ + V + ++M+TA+A
Sbjct: 411 SLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQ 470
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
G+ Q+A +F +E + PN V + ++ + G++++ F+ M
Sbjct: 471 VGRIQKARLIF----DEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKM 515
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 157/350 (44%), Gaps = 60/350 (17%)
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
++G +++A+R+F+ M +R+V+SW++M+ GY+ G + A+ +D KN TW ++ G
Sbjct: 183 RLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTG 242
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y K G + EA++VF+ ++E + W AM YVQNG K A +++ M ++NV
Sbjct: 243 YAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVA------ 296
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
N+++ + C + A F ++
Sbjct: 297 ---------------------------------SWNSVVTGYCHCYRMSEARELFDQMPE 323
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
++ +S+ MI+ + EA D+F+KM P+Q F+ VL+A + G
Sbjct: 324 RNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT-------GLDD 376
Query: 369 FELM--TRVFGIKPLTEHL----TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
EL+ R IK E + +++ R+G L+ A + + +W ++
Sbjct: 377 LELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEY-SWTTMIA 435
Query: 423 ACKVHVNAELGEI-AARHLLELGPEKT-GNSALLANIYASMGKWKDSEIV 470
A A+ G + A L E PE+T + YA +G+ + + ++
Sbjct: 436 AF-----AQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLI 480
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 12/173 (6%)
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I G+ G V EA++VF+E+ + D W +M Y QNG A ++ +N+R
Sbjct: 178 IQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWT 237
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ + G + G +E A+ V E +R NA+I + + G L A + F
Sbjct: 238 ILLTGY----AKEGRIEE----AREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDE 289
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
+ K+V S++S++T + + EA ++F +M E N V+++ +++ H
Sbjct: 290 MPEKNVASWNSVVTGYCHCYRMSEARELFDQMP----ERNSVSWMVMISGYVH 338
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
N I + G ++ A R F+ + +DV+S++SMI ++ +GK EA +F + +
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF----DAFVG 230
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
N T+ +LT + G +E+ + FE MT + M+ ++G L+ A
Sbjct: 231 KNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVS-----WNAMISGYVQNGDLKNARK 285
Query: 404 LIMDYKDFCDAGTWGALL-GACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
L + + + +W +++ G C + +E AR L + PE+ S ++
Sbjct: 286 LFDEMPE-KNVASWNSVVTGYCHCYRMSE-----ARELFDQMPERNSVSWMV 331
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 244/452 (53%), Gaps = 29/452 (6%)
Query: 62 IPKCKTQFLWT----SLIRNHVLHAHFR--QSILLYAKMHRLGVLTSGFTFSSVLNACAR 115
+P KT FL T + N ++ A R S+ Y M G FTF ++ + +
Sbjct: 62 LPHAKTIFLHTHNPSPFMFNTIIMASSRTLDSVTFYVCMLHAGHFPDNFTFPFLIKSSSA 121
Query: 116 VPS---------------------LLEAVICGYTKIGLMDDAQRLFD-SMAERNVISWSA 153
P+ ++ +I Y+ + A+++FD S + +V+SW+
Sbjct: 122 SPTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTT 181
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
++ G++N G + A++ +D M KN+V+W AMI+GY + EA+K+FDE+ + DA+ W
Sbjct: 182 LITGFSNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASW 241
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRI-SEVAMVGAISACTQLGDVEMAAILAKHVD 272
+AM Y Q G A++++ M + I +E A+V A+SAC QL +E L ++
Sbjct: 242 SAMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIK 301
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
E + L+ M+ KCG + A F+ + ++V S++SMI A +G +EAL
Sbjct: 302 EKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALA 361
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F KM+ G PN +TFI +LT CSH GL+ +G F +MT+V+GIKP +H CMVDLL
Sbjct: 362 LFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLL 421
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR+G +++A + + WGAL+GAC++H ELGE + L++L P G A
Sbjct: 422 GRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYA 481
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
LL NI+A+ +W D +V+ + + K+PG
Sbjct: 482 LLCNIFAAAQRWDDVAMVRDLEKGRKVLKNPG 513
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 255/466 (54%), Gaps = 16/466 (3%)
Query: 25 KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAH 83
+ L D+ Y +I +L G++ A +VFD+ C + W SLI +V
Sbjct: 179 QVLKMGFDKDMYLYNGIIHMLVSVGES-GLAHKVFDE--GCVRDLVSWNSLINGYVRRRQ 235
Query: 84 FRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSM 143
R+++ +Y +M V T V++ACA++ SL K+G + R +
Sbjct: 236 PREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESL---------KLG--REIHRYIEES 284
Query: 144 AERNVISW-SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVF 202
IS +A++ Y CG+++A K +D M +K V+W MI GY K G + A K+F
Sbjct: 285 GLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLF 344
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
++ E + W AM VQ + A+E+++ M+ N++ +V M+ +SAC+QLG ++
Sbjct: 345 HDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALD 404
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
++ + + ALI M++KCG + A + F+ + ++ ++++++I A
Sbjct: 405 TGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLA 464
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
+G +A+ F KM + G+ P+++TF+GVLTAC HGGLVE+G K F+ M F + P
Sbjct: 465 LYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQP 524
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
+H +CMV+LLGR+G LE+A LI DA WGAL AC +H N +GE AA LL+
Sbjct: 525 KHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLD 584
Query: 443 LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L P +G LLAN+Y GKW++++ ++ M+ E +K+PG S I
Sbjct: 585 LDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSI 630
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 222/411 (54%), Gaps = 39/411 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK----------- 165
P +L +++ Y + GL+ AQR+FD M + +SW+A++ Y + G+++
Sbjct: 106 PHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFA 165
Query: 166 -----------------------AAKEFYDRMTEKNSVTWVAMIAG-----YGKCGEVRE 197
A E R E+ + +A Y KCGE+ +
Sbjct: 166 NGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAK 225
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A++VFD++ + DA W AM Y NG+ + A++++ M+ E VR A+ GA+SACT+
Sbjct: 226 AREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTR 285
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
LG +++ + VD + ALI M++KCG AW F +++ KD+I +++M
Sbjct: 286 LGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAM 345
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I G + A + +M G++ N TFIG+L +C+H GL++DG + F MT+++
Sbjct: 346 ILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYH 405
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I P EH C+VDLL R+G L++AH LI D +A GALLG CK+H NAEL E
Sbjct: 406 ISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVL 465
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+ L P +GN +L+NIY++ G+W+D+ +++ + E +K P CSW+
Sbjct: 466 TQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWV 516
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 61/271 (22%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A++VFD++P T WT+LI ++ R+++ + G+ FT VL
Sbjct: 122 LHRAQRVFDEMPHPST-VSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLT 180
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
ACARV L A + Y K G M A+ +FD M +++ ++
Sbjct: 181 ACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVA 240
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEK--------------------------------- 177
W AMV GYA+ G+ + A + + M +
Sbjct: 241 WGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVD 300
Query: 178 ------NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
N V A+I Y KCG EA VF ++ + D W AM + G+ K A
Sbjct: 301 WDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFT 360
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+ M + V++++ +G + +CT G ++
Sbjct: 361 LIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQ 391
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 242/443 (54%), Gaps = 29/443 (6%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR +FD+IP + +L+ H + L+A M V++
Sbjct: 65 LADARHLFDRIPT-PDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVS---------- 113
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
++ G +K G +++A+ +F +M RN +SW+AMV+G+A +M AA+E++
Sbjct: 114 --------WNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWF 165
Query: 172 DRMTEK-NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
EK ++V W AM++GY G V +A + F+ + + W A+ YV+N +A A+
Sbjct: 166 RNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDAL 225
Query: 231 EMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC----CDRTNYVSNA 285
+++ M R+ NV+ + + + C+ L A K + + C R V +
Sbjct: 226 RLFRTMVREANVQPNASTLSSVLLGCSNLS----ALGFGKQIHQWCMKLPLSRNLTVGTS 281
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ M+ KCG L A + F + +DV+++++MI+ +A HG +EA+++F +M++EG+EPN
Sbjct: 282 LVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPN 341
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+TF+ VLTAC H GL + G + FE M ++GI+P +H +CMVDLL R+G+LE+A LI
Sbjct: 342 WITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI 401
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+G LL AC+V+ N E E+AA L+E P+ G LANIYA +W
Sbjct: 402 RSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWD 461
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D V+ + + K+PG SWI
Sbjct: 462 DVSRVRRWMKDNAVVKTPGYSWI 484
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 42/289 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR-LGVLTSGFTFSSV 109
N+ A + F+ +P + W +++ +V ++H ++ L+ M R V + T SSV
Sbjct: 189 NVVKAIEYFEAMP-VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSV 247
Query: 110 LNACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNV 148
L C+ + +L +++ Y K G + A +LF M R+V
Sbjct: 248 LLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDV 307
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
++W+AM++GYA G+ K A ++RM E N +T+VA++ G + F+
Sbjct: 308 VAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEG 367
Query: 205 IS-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+ EP ++ M + G + A+++ + M E A ++AC
Sbjct: 368 MQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEP---HPSAYGTLLAACRVYK 424
Query: 260 DVEMAAILA-KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++E A + A K +++ YV A I+ + W + SR++
Sbjct: 425 NLEFAELAAGKLIEKDPQSAGAYVQLANIYAGAN------QWDDVSRVR 467
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 264/547 (48%), Gaps = 65/547 (11%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK- 64
L+P+ ++ +KQ+H++LL + P++ + L + + +
Sbjct: 54 LLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAAAASDYALLLLASH 113
Query: 65 -CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR--VPSLLE 121
T F + IR + S+ L+ M R + +T +L A AR PSL
Sbjct: 114 SAPTAFSYNVAIR-FFASSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLAR 172
Query: 122 AVICGYTKIGL----------------MDD---AQRLFDSMAERNVISWSAMVAGYANCG 162
A KIGL +DD A+++FD + R+V+SW+AM+ Y G
Sbjct: 173 AAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVG 232
Query: 163 -NMKAAKEFYDRMTEK---------------------------------------NSVTW 182
N + + F D + E +S+
Sbjct: 233 MNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVG 292
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A++ Y KCGE+ EA++VFD I + D W AM Y QNG + AI ++ MR +R
Sbjct: 293 SALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMR 352
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
++ + G +SAC+ +G +E+ + L + YV AL+ M++KCG LD A
Sbjct: 353 PDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEV 412
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHGGL 361
F ++ K+V S++++I A +G+ EA+ F MRNE G++P+ +TFIGVL+AC H GL
Sbjct: 413 FRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGL 472
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V+DG + F +T F I P EH +CMVDLL RSG LE+A I D DA GALL
Sbjct: 473 VKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALL 532
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
AC+ N E+GE +++L P + N + + IYAS + DS ++ ++ E K
Sbjct: 533 AACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNK 592
Query: 482 SPGCSWI 488
+PGCSW+
Sbjct: 593 TPGCSWV 599
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 264/547 (48%), Gaps = 65/547 (11%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK- 64
L+P+ ++ +KQ+H++LL + P++ + L + + +
Sbjct: 54 LLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAAAASDYALLLLASH 113
Query: 65 -CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR--VPSLLE 121
T F + IR + S+ L+ M R + +T +L A AR PSL
Sbjct: 114 SAPTAFSYNVAIR-FFASSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLAR 172
Query: 122 AVICGYTKIGL----------------MDD---AQRLFDSMAERNVISWSAMVAGYANCG 162
A KIGL +DD A+++FD + R+V+SW+AM+ Y G
Sbjct: 173 AAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVG 232
Query: 163 -NMKAAKEFYDRMTEK---------------------------------------NSVTW 182
N + + F D + E +S+
Sbjct: 233 MNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVG 292
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A++ Y KCGE+ EA++VFD I + D W AM Y QNG + AI ++ MR +R
Sbjct: 293 SALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMR 352
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
++ + G +SAC+ +G +E+ + L + YV AL+ M++KCG LD A
Sbjct: 353 PDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEV 412
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHGGL 361
F ++ K+V S++++I A +G+ EA+ F MRNE G++P+ +TFIGVL+AC H GL
Sbjct: 413 FRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGL 472
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V+DG + F +T F I P EH +CMVDLL RSG LE+A I D DA GALL
Sbjct: 473 VKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALL 532
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
AC+ N E+GE +++L P + N + + IYAS + DS ++ ++ E K
Sbjct: 533 AACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNK 592
Query: 482 SPGCSWI 488
+PGCSW+
Sbjct: 593 TPGCSWV 599
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 263/532 (49%), Gaps = 67/532 (12%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+HSYL K Y + + L + ++ A +F+ + LW ++
Sbjct: 265 QLHSYLFKAGISSD----YIMEGSLLDLYVKCGDVETALVIFNSSDRTNV-VLWNLMLVA 319
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVPSLLEAV------------ 123
+S L+ +M G+ + FT+ +L C R L E +
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 124 -------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------------------ 158
I Y+K G ++ A+R+ + + E++V+SW++M+AGY
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK 439
Query: 159 --------------ANCGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
+ C + A ++ Y + W A++ Y +CG +RE
Sbjct: 440 CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A F+E+ D + + Q+G + A++++ M Q V+ + V A+SA
Sbjct: 500 AFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559
Query: 258 LGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L +++ I A+ + G T V NALI ++ KCG + A EFS + ++ +S+++
Sbjct: 560 LAEIKQGKQIHARVIKTGHSFETE-VGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNT 618
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
+IT+ + HG+ EALD+F +M+ EGI+PN VTFIGVL ACSH GLVE+G F+ M+ +
Sbjct: 619 IITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEY 678
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
GI+P +H C++D+ GR+GQL++A I + DA W LL ACKVH N E+GE A
Sbjct: 679 GIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFA 738
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HLLEL P + + LL+N YA KW + + V+ M+ + +K PG SWI
Sbjct: 739 AKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWI 790
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 196/457 (42%), Gaps = 68/457 (14%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
+ ++H+ K +T+ +Y LI L G L AR+VF+++ + W +++
Sbjct: 61 VPEIHA---KAVTRGLGKYRIVGNLLIDLYSKNGLVLP-ARRVFEEL-SARDNVSWVAML 115
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------------- 121
+ + +++ LY +MHR GV+ + + SSVL++C + +
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFC 175
Query: 122 -------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
AVI Y + G A+R+F M R+ ++++ +++G+A CG+ + A E ++ M
Sbjct: 176 SEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEM 235
Query: 175 T----EKNSVTWVAMIAG-----------------------------------YGKCGEV 195
+ VT +++A Y KCG+V
Sbjct: 236 QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV 295
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A +F+ + W M V + Q + E++ M+ +R ++ + C
Sbjct: 296 ETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTC 355
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
T ++++ + + + YVS LI M+SK G+L+ A R +K KDV+S++
Sbjct: 356 TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWT 415
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
SMI + H ++AL F +M+ GI P+ + ++ C+ + G Q V
Sbjct: 416 SMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL-QIHARIYV 474
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKD 410
G +V+L R G++ +A S M+ KD
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKD 511
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 124/243 (51%), Gaps = 10/243 (4%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y K G V A++VF+E+S D W AM Y QNG + A+ +Y+ M + V +
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142
Query: 245 EVAMVGAISACTQLGDVEMAA----ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
+ +S+CT+ E+ A I A+ G C +V NA+I ++ +CG LA
Sbjct: 143 PYVLSSVLSSCTK---AELFAQGRLIHAQGYKHGFCSEI-FVGNAVITLYLRCGSFRLAE 198
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
R F + ++D ++++++I+ A G + AL++F +M+ G+ P+ VT +L AC+ G
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
++ G + + + GI ++DL + G +E A +I + D + W +
Sbjct: 259 DLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETA-LVIFNSSDRTNVVLWNLM 316
Query: 421 LGA 423
L A
Sbjct: 317 LVA 319
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 152/340 (44%), Gaps = 41/340 (12%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV--- 183
Y+K GL+ A+R+F+ ++ R+ +SW AM++GYA G + A Y +M V
Sbjct: 87 YSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVL 146
Query: 184 ------------------------------------AMIAGYGKCGEVREAKKVFDEISE 207
A+I Y +CG R A++VF ++
Sbjct: 147 SSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPH 206
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D + + + Q G+ + A+E+++ M+ + V + ++AC LGD++ L
Sbjct: 207 RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQL 266
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
++ + + +L+ ++ KCG ++ A F+ +V+ ++ M+ AF
Sbjct: 267 HSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDL 326
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++ ++F +M+ GI PNQ T+ +L C+ ++ G +Q ++ G +
Sbjct: 327 AKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG-EQIHSLSVKTGFESDMYVSGV 385
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++D+ + G LEKA ++ K+ D +W +++ H
Sbjct: 386 LIDMYSKYGWLEKARRVLEMLKEK-DVVSWTSMIAGYVQH 424
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/492 (32%), Positives = 247/492 (50%), Gaps = 59/492 (11%)
Query: 55 ARQVFDQIPK--CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA 112
A VF ++P+ + F W + IR H R ++L +A+M GV +TF +VL A
Sbjct: 64 ADAVFARLPEPAARDPFPWNTAIRLHA-PGRPRAALLYFARMRSCGVRPDAYTFPAVLKA 122
Query: 113 CARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMA--ERNVI 149
C P + A+I Y +I +++FD R+++
Sbjct: 123 CGCAPGCRAGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDEAGGVSRDLV 182
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG--EVREAKKVFDEISE 207
SW++MVAGY CG M A+E +D M ++++ +W A+I GYGK G V A+++FD+++E
Sbjct: 183 SWNSMVAGYVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDRARELFDQMTE 242
Query: 208 PDASCWAAMTVCY-------------------------------VQNGYAKAAIEMYKVM 236
D CW +M Y V+ G AK A+E ++ M
Sbjct: 243 RDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSM 302
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ +R VA VGA+SAC QLG +E L ++++ V ALI M+ KCG +
Sbjct: 303 LRCGIRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRM 362
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
DLA F + + V++++ MI HG +A+ +F +M E + + ++ + +LTAC
Sbjct: 363 DLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLAMLTAC 422
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
+H GLV +G + F M + FGI P EH +VDLLGR+G+L++A I
Sbjct: 423 THAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPEL 482
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
WG+LL AC+ H EL E++ L LG + +G LL+NIYA G W D ++ ++S+
Sbjct: 483 WGSLLAACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSD 542
Query: 477 TEKKKSPGCSWI 488
+K G S I
Sbjct: 543 EGMRKDIGRSVI 554
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 242/443 (54%), Gaps = 29/443 (6%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR +FD+IP + +L+ H + L+A M V++
Sbjct: 114 LADARHLFDRIPT-PDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVS---------- 162
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
++ G +K G +++A+ +F +M RN +SW+AMV+G+A +M AA+E++
Sbjct: 163 --------WNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWF 214
Query: 172 DRMTEK-NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
EK ++V W AM++GY G V +A + F+ + + W A+ YV+N +A A+
Sbjct: 215 RNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDAL 274
Query: 231 EMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC----CDRTNYVSNA 285
+++ M R+ NV+ + + + C+ L A K + + C R V +
Sbjct: 275 RLFRTMVREANVQPNASTLSSVLLGCSNLS----ALGFGKQIHQWCMKLPLSRNLTVGTS 330
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ M+ KCG L A + F + +DV+++++MI+ +A HG +EA+++F +M++EG+EPN
Sbjct: 331 LVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPN 390
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+TF+ VLTAC H GL + G + FE M ++GI+P +H +CMVDLL R+G+LE+A LI
Sbjct: 391 WITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI 450
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+G LL AC+V+ N E E+AA L+E P+ G LANIYA +W
Sbjct: 451 RSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWD 510
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D V+ + + K+PG SWI
Sbjct: 511 DVSRVRRWMKDNAVVKTPGYSWI 533
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 42/289 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR-LGVLTSGFTFSSV 109
N+ A + F+ +P + W +++ +V ++H ++ L+ M R V + T SSV
Sbjct: 238 NVVKAIEYFEAMP-VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSV 296
Query: 110 LNACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNV 148
L C+ + +L +++ Y K G + A +LF M R+V
Sbjct: 297 LLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDV 356
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
++W+AM++GYA G+ K A ++RM E N +T+VA++ G + F+
Sbjct: 357 VAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEG 416
Query: 205 IS-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+ EP ++ M + G + A+++ + M E A ++AC
Sbjct: 417 MQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEP---HPSAYGTLLAACRVYK 473
Query: 260 DVEMAAILA-KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++E A + A K +++ YV A I+ + W + SR++
Sbjct: 474 NLEFAELAAGKLIEKDPQSAGAYVQLANIYAGAN------QWDDVSRVR 516
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 228/420 (54%), Gaps = 9/420 (2%)
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---LLEAVICGYTKIGL 132
R V+HA L +M G L S + + V C V + ++I GY
Sbjct: 16 RELVMHAKCSTESL--NQMFLFGTLCSMVSANKVF--CEMVEKNVVIWTSMINGYLLNKD 71
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
+ A+R FD ER+++ W+ MVAGY GNM A+ +D+M ++ ++W ++ GY
Sbjct: 72 LVSARRYFDLSPERDIVLWNTMVAGYIEMGNMMEARSLFDQMPCRDVMSWNTVLEGYANI 131
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGA 251
G++ ++VFDE+ E + W + Y QNG + +K M E +V ++ +
Sbjct: 132 GDMEACERVFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLV 191
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+SAC +LG + + K+ + ++ + V NALI M+ KCG +++A F IK +D
Sbjct: 192 LSACAKLGAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRD 251
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+IS+++MI A HG EALD+F +M+N GI P++VTF+GVL AC H GLVEDG F
Sbjct: 252 LISWNTMINGLAAHGHGTEALDLFHEMKNCGISPDKVTFVGVLCACKHMGLVEDGLAYFN 311
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
M F I P EH C+VDLL R+G L +A I DA W LLGA KV+
Sbjct: 312 SMFTDFSITPQIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKV 371
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
+ GE+A + L++L P N +L+NIY G++ D+ +K+ + +T KK G SWI +
Sbjct: 372 DTGELALKELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGISWIET 431
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 274/526 (52%), Gaps = 60/526 (11%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN-LSYARQVFDQIPKCKTQFLWTS 73
+++Q+H++ LKT H + + L+ L P N L YAR +FD+I + ++ W +
Sbjct: 28 EVEQLHAFSLKTAIFNHP---FVSSRLLALYSDPKINDLGYARSIFDRIQR-RSLIHWNT 83
Query: 74 LIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSLLE----------- 121
+I+ +V + I+L+ ++ H L FT V+ CAR+ + E
Sbjct: 84 IIKCYVENQFSHDGIVLFHELVHEY--LPDNFTLPCVIKGCARLGVVQEGKQIHGLALKI 141
Query: 122 ----------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+++ Y+K G +D A+++FD M +++V+ W++++ GYA CG + A + +
Sbjct: 142 GFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLF 201
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ--------- 222
+ M E+++ +W ++ G KCG+V A+K+FD++ + W AM Y++
Sbjct: 202 EEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALE 261
Query: 223 ----------------------NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
NG A++M+ +M + R S +V +SA + L
Sbjct: 262 LFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAV 321
Query: 261 VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
+ + ++++ + + +LI M++KCG ++ A F I+ K V ++++I
Sbjct: 322 LGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVG 381
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
HG + AL +FL+M G++PN + FIGVL AC+H GLV+DG + F++M + I+P
Sbjct: 382 LGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEP 441
Query: 381 LTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHL 440
EH C+VD+L R+G LE+A + I + + W +LLG + H ++GE AA+ +
Sbjct: 442 TLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRV 501
Query: 441 LELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
+E+ PE G LL+N+YA+ G W+ V+ M+ + +K PGCS
Sbjct: 502 IEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCS 547
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 248/475 (52%), Gaps = 32/475 (6%)
Query: 30 PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSI 88
PH H Y L LL+ P D A +FD +P + + +L+ + V H +++
Sbjct: 98 PHKNAHSYNTLLAALLRRP-DTFPDALHLFDTMPADARNLVSYNTLMSSLVHHGRQAEAL 156
Query: 89 LLYAKMHRLGVLTSG-----FTFSSVLNACA--RVPSLLEAVICGYTKIGLMDDAQRLFD 141
+ A++ R L G FT SV ACA R L + G+
Sbjct: 157 RVVARLARDRFLGPGLAMDRFTVVSVATACAGIRAARPLREMHGAVVVSGM--------- 207
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKV 201
E VI +AMV Y+ ++ A+ +D+++ +++VTW +MI+GY + ++ EA +V
Sbjct: 208 ---ELTVIMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQV 264
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
FD + + D W A+ + QNG A+E+++ M E V + A+V + AC +LG V
Sbjct: 265 FDMMPDKDRVAWTALISGHEQNGEEDTALELFERMLAEGVSPTTFALVSVLGACAKLGLV 324
Query: 262 EMA-----AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
+IL + + G ++ NAL+ M+SKCG + A F R+ +D IS++S
Sbjct: 325 TRGKELHCSILRRSI--GSDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMPERDFISWNS 382
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
M+T F+ +G +++L +F +M G+ P VTF+ VLTACSH GLV +G E M
Sbjct: 383 MVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLILESMED-H 441
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC---DAGTWGALLGACKVHVNAELG 433
G++P EH +D LGR+ QLE+A I D AG+WGALLGAC++H N EL
Sbjct: 442 GVEPRAEHYAAFIDALGRNRQLEEAIEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELA 501
Query: 434 EIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E A L +L P +G +L+NIYA+ G+W D+ V+ ++ E KK SWI
Sbjct: 502 EEVAEFLFKLEPGNSGRYVMLSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWI 556
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 264/547 (48%), Gaps = 65/547 (11%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK- 64
L+P+ ++ +KQ+H++LL + P++ + L + + +
Sbjct: 54 LLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAAAASDYALLLLASH 113
Query: 65 -CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR--VPSLLE 121
T F + IR + S+ L+ M R + +T +L A AR PSL
Sbjct: 114 SAPTAFSYNVAIR-FFASSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLAR 172
Query: 122 AVICGYTKIGL----------------MDD---AQRLFDSMAERNVISWSAMVAGYANCG 162
A KIGL +DD A+++FD + R+V+SW+AM+ Y G
Sbjct: 173 AAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVG 232
Query: 163 -NMKAAKEFYDRMTEK---------------------------------------NSVTW 182
N + + F D + E +S+
Sbjct: 233 MNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVG 292
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A++ Y KCGE+ EA++VFD I + D W AM Y QNG + AI ++ MR +R
Sbjct: 293 SALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMR 352
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
++ + G +SAC+ +G +E+ + L + YV AL+ M++KCG LD A
Sbjct: 353 PDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEV 412
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHGGL 361
F ++ K+V S++++I A +G+ EA+ F MRNE G++P+ +TFIGVL+AC H GL
Sbjct: 413 FRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGL 472
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V+DG + F +T F I P EH +CMVDLL RSG LE+A I D DA GALL
Sbjct: 473 VKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALL 532
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
AC+ N E+GE +++L P + N + + IYAS + DS ++ ++ E K
Sbjct: 533 AACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNK 592
Query: 482 SPGCSWI 488
+PGCSW+
Sbjct: 593 TPGCSWV 599
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 258/491 (52%), Gaps = 21/491 (4%)
Query: 3 SKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQI 62
++ L+ R +L Q+H LLK T + + L+ ++ NL+Y R VFD I
Sbjct: 13 TQALLERCSNMKELMQIHGQLLKKGTIRNQLT--VSTLLVSYARIELVNLAYTRVVFDSI 70
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA 122
T +W +++R + ++LLY +M V + +TF +L AC+ + +
Sbjct: 71 SSPNT-VIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAF--- 126
Query: 123 VICGYTKIGLMDDAQRLFDSMAERN----VISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
++ Q++ + +R V + ++++ YA GN+++A ++++ ++
Sbjct: 127 -----------EETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRD 175
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
V+W MI GY K G + A K+F + E + W M V +V+ G K A+ + + M
Sbjct: 176 IVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLV 235
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
++ + + ++SAC LG +E + ++++ + L M+ KCG ++
Sbjct: 236 AGIKPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEK 295
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A FS+++ K V +++++I A HGK +EALD F +M+ GI PN +TF +LTACSH
Sbjct: 296 ALLVFSKLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSH 355
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL E+G FE M+ V+ IKP EH CMVDL+GR+G L++A I +A WG
Sbjct: 356 AGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWG 415
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALL AC++H + ELG+ + L+EL P+ +G LA+IYA+ G+W V+ I
Sbjct: 416 ALLNACQLHKHFELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRG 475
Query: 479 KKKSPGCSWIS 489
PGCS I+
Sbjct: 476 LLNHPGCSSIT 486
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 256/483 (53%), Gaps = 62/483 (12%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
T Q KQ+H++++KT H++ I L P LS + Q W
Sbjct: 90 TLEQTKQIHAHIIKT--------HFHHALQIPLNDFPS-GLSPSAQ-------------W 127
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP-SLLEAVICGYT-K 129
+I ++ R ++ +YA++ ++ F SVL AC +V + L I G+ K
Sbjct: 128 NFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLK 187
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV----AM 185
GL +R+V +A++ Y C ++ A+ +D+M E++ V+W+ A+
Sbjct: 188 KGL------------DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTAL 235
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
+ Y KCG + A+++F+ +++ W AM +++ + +++ M++EN+ +E
Sbjct: 236 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNE 295
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ M+ VE+ IL + AL+ M++KCG ++ A R F
Sbjct: 296 ITMLNK-------ERVEVDCIL---------------NTALVDMYAKCGDINAAGRLFIE 333
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
++D+ ++++IT FA HG +EALD+F +M +G++PN +TFIG+L ACSH GLV +G
Sbjct: 334 AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEG 393
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
K FE M FG+ P EH CMVDLLGR+G L++AH +I + WGAL+ AC+
Sbjct: 394 KKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACR 453
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H N +LGE+AA LLE+ PE G + L++NIYA+ +W D+ V+ + KK PG
Sbjct: 454 LHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGH 513
Query: 486 SWI 488
S I
Sbjct: 514 SVI 516
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 232/451 (51%), Gaps = 58/451 (12%)
Query: 94 MHRLGVLTSGFTFSSVLNACARVPSLLEA------VICG---------------YTKIGL 132
M R GV T+S ++ C+ ++ E + C Y K L
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK---EFYDRMTEKNSVTWV------ 183
+++A+ LFD M ERNV+SW+ M++ Y+N N KA K + N T+
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRAC 165
Query: 184 --------------------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
A+I Y K ++ A VFDE+ D W ++
Sbjct: 166 DGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSII 225
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
+ QN A+ ++K M++ + + + ACT L +E+ + HV + D
Sbjct: 226 GGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FD 283
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
+ ++NALI M+ KCG L+ A FSR+ KDVIS+S+M+ A +G S++AL++F M
Sbjct: 284 QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESM 343
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ G PN +T +GVL ACSH GLVE G F M ++FG+ P EH C++DLLGR+G+
Sbjct: 344 KESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGR 403
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
L++A LI + + D+ TW LLGAC+VH N +L AA+ ++EL PE G LL+NI
Sbjct: 404 LDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNI 463
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
YA+ +W+D V+ ++ +K+PGCSWI
Sbjct: 464 YANTQRWEDVAEVRKTMTNRGIRKTPGCSWI 494
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 151/338 (44%), Gaps = 75/338 (22%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIR--NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
L A +FD++P+ + WT++I ++ L+ + ++L M R GV + FT+SSV
Sbjct: 106 LEEAEDLFDEMPE-RNVVSWTTMISAYSNKLNDKALKCLIL---MFREGVRPNMFTYSSV 161
Query: 110 LNACARVPSLLEAVICGYTKIGL-------------------MDDAQRLFDSMAERNVIS 150
L AC +P+L + + CG K GL +D+A +FD M R+++
Sbjct: 162 LRACDGLPNLRQ-LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVV 220
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM------TEKNSVTWV--------------------- 183
W++++ G+A + A + RM ++ ++T V
Sbjct: 221 WNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL 280
Query: 184 ----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A+I Y KCG + +A F + E D W+ M QNGY++ A+E++
Sbjct: 281 KFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELF 340
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH------VDEGCCDRTNYVSNALI 287
+ M++ R + + ++G + AC+ G VE + VD G R +Y LI
Sbjct: 341 ESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPG---REHY--GCLI 395
Query: 288 HMHSKCGYLDLAWREFSRIK-NKDVISYSSMITAFADH 324
+ + G LD A + ++ D +++ +++ A H
Sbjct: 396 DLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVH 433
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 15/276 (5%)
Query: 136 AQRLFDSMAERNV----ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIA 187
A R D+M V I++S ++ + G ++ K ++ + E ++
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y K + EA+ +FDE+ E + W M Y N A++ +M +E VR +
Sbjct: 99 MYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFT 157
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ AC L ++ L + + + +V +ALI ++SK LD A F +
Sbjct: 158 YSSVLRACDGLPNLRQ---LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMP 214
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+D++ ++S+I FA + EAL++F +M+ G +Q T VL AC+ L+E G +
Sbjct: 215 TRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELG-R 273
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
Q + F + + ++D+ + G LE A+S
Sbjct: 274 QVHVHVLKFDQDLILNN--ALIDMYCKCGSLEDANS 307
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 38/254 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A VFD++P + +W S+I ++ +++ L+ +M R G L T +SVL
Sbjct: 202 DLDNALGVFDEMPT-RDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVL 260
Query: 111 NACARVPSLLE--------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC + +LLE A+I Y K G ++DA F M E++VIS
Sbjct: 261 RACTGL-ALLELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVIS 319
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEV-------REAK 199
WS MVAG A G + A E ++ M E N +T + ++ G V R K
Sbjct: 320 WSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMK 379
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
K+F +P + + + G A+++ M E ++ ++G AC
Sbjct: 380 KLFG--VDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLG---ACRVHR 434
Query: 260 DVEMAAILAKHVDE 273
+V++A AK + E
Sbjct: 435 NVDLAIYAAKKIIE 448
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 242/443 (54%), Gaps = 29/443 (6%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR +FD+IP + +L+ H + L+A M V++
Sbjct: 65 LADARHLFDRIPT-PDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVS---------- 113
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
++ G +K G +++A+ +F +M RN +SW+AMV+G+A +M AA+E++
Sbjct: 114 --------WNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWF 165
Query: 172 DRMTEK-NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
EK ++V W AM++GY G V +A + F+ + + W A+ YV+N +A A+
Sbjct: 166 RNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDAL 225
Query: 231 EMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC----CDRTNYVSNA 285
+++ M R+ NV+ + + + C+ L A K + + C R V +
Sbjct: 226 RLFRTMVREANVQPNASTLSSVLLGCSNLS----ALGFGKQIHQWCMKLPLSRNLTVGTS 281
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ M+ KCG L A + F + +DV+++++MI+ +A HG +EA+++F +M++EG+EPN
Sbjct: 282 LVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPN 341
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+TF+ VLTAC H GL + G + FE M ++GI+P +H +CMVDLL R+G+LE+A LI
Sbjct: 342 WITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLI 401
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+G LL AC+V+ N E E+AA L+E P+ G LANIYA +W
Sbjct: 402 RSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWD 461
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D V+ + + K+PG SWI
Sbjct: 462 DVSRVRRWMKDNAVVKTPGYSWI 484
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 42/289 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR-LGVLTSGFTFSSV 109
N+ A + F+ +P + W +++ +V ++H ++ L+ M R V + T SSV
Sbjct: 189 NVVKAIEYFEAMP-VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSV 247
Query: 110 LNACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNV 148
L C+ + +L +++ Y K G + A +LF M R+V
Sbjct: 248 LLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDV 307
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
++W+AM++GYA G+ K A ++RM E N +T+VA++ G + F+
Sbjct: 308 VAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEG 367
Query: 205 IS-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+ EP ++ M + G + A+++ + M E A ++AC
Sbjct: 368 MQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEP---HPSAYGTLLAACRVYK 424
Query: 260 DVEMAAILA-KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++E A + A K +++ YV A I+ + W + SR++
Sbjct: 425 NLEFAELAAGKLIEKDPQSAGAYVQLANIYAGAN------QWDDVSRVR 467
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 259/536 (48%), Gaps = 61/536 (11%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
+ + + Q+H+ +LK Q + A LI L +L+ A VF+ +P
Sbjct: 30 KCTNLDSVNQIHAQVLKANLH---QDLFVAPKLIAAFSL-CRHLASAVNVFNHVPHPNVH 85
Query: 69 FLWTSLIRNHVLHAHFRQ-SILLYAKMHRLGVLTSGFTFSSVLNACAR------------ 115
L+ S+IR H ++ R + +M + G+ FT+ +L AC+
Sbjct: 86 -LYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHA 144
Query: 116 ------------VPSLL------------------------------EAVICGYTKIGLM 133
VP+ L ++I G + G +
Sbjct: 145 HVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGEL 204
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
A +LFD M +R+++SW+ M+ GYA G M A E ++RM +N V+W M+ GY K G
Sbjct: 205 QGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGG 264
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
++ A+ +FD + W + Y + G A+ A E+Y M + +R + ++ ++
Sbjct: 265 DMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILA 324
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS-RIKNKDVI 312
AC + G + + + + V NA I M++KCG LD A+ FS + KDV+
Sbjct: 325 ACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVV 384
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++SMI FA HG ++AL++F M EG EP+ TF+G+L AC+H GLV +G K F M
Sbjct: 385 SWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSM 444
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+V+GI P EH CM+DLLGR G L++A L+ +A G LL AC++H + +L
Sbjct: 445 EKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDL 504
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L +L P GN +LL+NIYA G W + V++ + T +K G S I
Sbjct: 505 ARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSI 560
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 247/477 (51%), Gaps = 48/477 (10%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYA-QFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTS 73
L Q+H+++++T Q H+ + QFL R P ++ Y+ QVF QI K + +
Sbjct: 83 HLLQIHAHIIRTSLI---QNHFISLQFLSRAALSPSRDMGYSSQVFSQIMK-PSGSQYNV 138
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLM 133
+IR + + Q LY +M R GV + + S V+ +C R+ SL+ GL
Sbjct: 139 MIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMG---------GLQ 189
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
A+ L D N++ ++ Y C
Sbjct: 190 IHARILRDGHQSDNLL--------------------------------LTTLMDLYSCCD 217
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ--ENVRISEVAMVGA 251
+ EA KVFDEI + D W + C + N + A+ M+ +M+ + +V +
Sbjct: 218 KFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLL 277
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ AC LG +E + +++E D + N+LI M+S+CG L+ A+ F R+ ++V
Sbjct: 278 LQACANLGALEFGERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNV 337
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S+S+MI+ FA HG +EA++ F +M+ G+ P+ T GVL+ACSH GLV+DG F+
Sbjct: 338 VSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDR 397
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M++VFGI+P H CMVDLLGR+G L++A+ LIM D+ W LLGAC++H +A
Sbjct: 398 MSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHAT 457
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LGE HL+EL ++ G+ LL NIY+S+G W ++ + E + SPGCS I
Sbjct: 458 LGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTI 514
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 266/514 (51%), Gaps = 37/514 (7%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R + + K++H++L+ T +++ A L+ G LS+AR++FD+IP +
Sbjct: 39 RDRALHAGKKLHAHLV---TNGFARFNVVASNLVSFYTCCG-QLSHARKLFDKIPTTNVR 94
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF--SSVLNACARVPSLL------ 120
W +LI + + ++ ++++M + LT + F SVL AC V +
Sbjct: 95 -RWIALIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACGHVGDRITGEKIH 153
Query: 121 ---------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
++I Y+K ++DA+++FD M ++ ++ +A+VAGY G
Sbjct: 154 GFILKCSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVKDTVALNAVVAGYVQQGAAN 213
Query: 166 AAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAMT 217
A + M + N VTW ++I+G+ + G+ ++F + EPD W ++
Sbjct: 214 EALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFRLMIADGVEPDVVSWTSVI 273
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
+VQN K A + +K M + + + AC V + + + +
Sbjct: 274 SGFVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGYALVTGVE 333
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
YV +AL+ M++KCG++ A FSR+ K+ ++++S+I FA+HG +EA+++F +M
Sbjct: 334 GDIYVRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQM 393
Query: 338 RNEGIEP-NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
EG+ + +TF LTACSH G E G + F++M + I+P EH CMVDLLGR+G
Sbjct: 394 EKEGVAKLDHLTFTAALTACSHVGDFELGQRLFKIMQEKYSIEPRLEHYACMVDLLGRAG 453
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
+L +A+ +I D WGALL AC+ H + EL E+AA HL+EL PE N LL++
Sbjct: 454 KLHEAYCMIKTMPIEPDLFVWGALLAACRNHRHVELAEVAAMHLMELEPESAANPLLLSS 513
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
+YA GKW E VK I + + +K G SWI +
Sbjct: 514 VYADAGKWGKFERVKKRIKKGKLRKLQGLSWIEN 547
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 235/437 (53%), Gaps = 7/437 (1%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQ D + + K W ++I +V H F +++ ++ KM+ LG+ FT++SVL+
Sbjct: 241 LDAARQFLDGMTE-KLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLS 299
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
ACA L + I + L S++ N A+ Y CG + A++ +
Sbjct: 300 ACANAGFFLHGKQV-HAYILRTEPRPSLDFSLSVNN-----ALATLYWKCGKVDEARQVF 353
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
++M K+ V+W A+++GY G + EAK F+E+ E + W M QNG+ + +++
Sbjct: 354 NQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLK 413
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ M+ E + A GAI AC L + L + D + NALI M++
Sbjct: 414 LFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYA 473
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG ++ A F + D +S+++MI A HG +AL++F M E I P+++TF+
Sbjct: 474 KCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLT 533
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+ CSH GLVE+G + F+ M+ ++GI P +H M+DLL R+G+ +A +I
Sbjct: 534 VLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVE 593
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
W ALL C++H N +LG AA L EL P+ G LL+N+YA++G+W D V+
Sbjct: 594 PGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVR 653
Query: 472 MMISETEKKKSPGCSWI 488
++ + KK PGCSWI
Sbjct: 654 KLMRDKGVKKEPGCSWI 670
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 186/415 (44%), Gaps = 42/415 (10%)
Query: 51 NLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
N + AR++F P + + ++I + + +I L+ + R G FTF+SV
Sbjct: 96 NSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSV 155
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSM--AERNVISWSAMVAGYANCGNMKAA 167
L A A + + + C ++ S+ A +V A ++ M AA
Sbjct: 156 LGALALI--VEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAA 213
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
++ +D MTE++ ++W MIAGY + GE+ A++ D ++E W AM YV +G+
Sbjct: 214 RKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFL 273
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLG----DVEMAAILAKHVDEGCCDRTNYVS 283
A+EM++ M ++ E +SAC G ++ A + + D + V+
Sbjct: 274 EALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVN 333
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSS--------------------------- 316
NAL ++ KCG +D A + F+++ KD++S+++
Sbjct: 334 NALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLL 393
Query: 317 ----MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
MI+ A +G +E+L +F +M++EG EP F G + AC+ + G + +
Sbjct: 394 TWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQL 453
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
R+ G ++ + + G +E AH L + + D+ +W A++ A H
Sbjct: 454 VRL-GFDSSLSAGNALITMYAKCGVVEAAHCLFLTMP-YLDSVSWNAMIAALGQH 506
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 161/349 (46%), Gaps = 28/349 (8%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE--FYDRMTE 176
+L +I Y K + A LFD + + ++++ + ++A +++ GN A+E F +
Sbjct: 52 ILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGI 111
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAM--TVCYVQNGYAKAAI 230
+++V + AMI GY + A ++F ++ PD + ++ + + +
Sbjct: 112 RDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQ 171
Query: 231 EMYKVMRQENVRISEV--AMVGAISACTQLGDVEMAAILA---KHVDEGCCDRTNYVSNA 285
V++ + ++ V A++ C V ++++A K DE +R
Sbjct: 172 IHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDE-MTERDELSWTT 230
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
+I + + G LD A + + K V+++++MI+ + HG EAL+MF KM GI+ +
Sbjct: 231 MIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWD 290
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT---CMVDLLGRSGQLEKAH 402
+ T+ VL+AC++ G G + + R L L+ + L + G++++A
Sbjct: 291 EFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEAR 350
Query: 403 SLI--MDYKDFCDAGTWGALLGACKVHVNAELGEI-AARHLLELGPEKT 448
+ M KD +W A+L +VNA G I A+ E PE+
Sbjct: 351 QVFNQMPVKDLV---SWNAILSG---YVNA--GRIDEAKSFFEEMPERN 391
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 163/427 (38%), Gaps = 115/427 (26%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP------------- 63
KQVH+Y+L+T +P + + L + ARQVF+Q+P
Sbjct: 311 KQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSG 370
Query: 64 --------KCKTQF---------LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
+ K+ F WT +I + +S+ L+ +M G + F
Sbjct: 371 YVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAF 430
Query: 107 SSVLNACARVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
+ + ACA + +L+ + ++G FDS ++ + +A++ YA CG +
Sbjct: 431 AGAIIACAWLAALMHGRQLHAQLVRLG--------FDS----SLSAGNALITMYAKCGVV 478
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
+AA + M +SV+W AMIA G Q+G
Sbjct: 479 EAAHCLFLTMPYLDSVSWNAMIAALG-------------------------------QHG 507
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN 284
+ A+E++++M +E++ + + +S C+ G VE EG +
Sbjct: 508 HGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVE----------EG-----HRYFK 552
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
++ ++ C D Y+ MI GK EA DM M +EP
Sbjct: 553 SMSGLYGICPGED---------------HYARMIDLLCRAGKFSEAKDMIETMP---VEP 594
Query: 345 NQVTFIGVLTACS-HGGL---VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
+ +L C HG + ++ + FELM + G L L+ M +GR + K
Sbjct: 595 GPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVL---LSNMYATVGRWDDVAK 651
Query: 401 AHSLIMD 407
L+ D
Sbjct: 652 VRKLMRD 658
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 238/438 (54%), Gaps = 10/438 (2%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L +R++F ++ + W ++I ++ L+ +M R GVL FTF S+L
Sbjct: 157 SLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLL 216
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
C++ G ++G + + S + ++I +A+V Y CG++ A
Sbjct: 217 LVCSKE---------GNLEVGRLVHCH-MLASGSRVDLILGNALVDMYGKCGDLWMAHRC 266
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D M KN V+W +M+ K G V A+ F+++ E + W AM CYVQ G +
Sbjct: 267 FDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETL 326
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+Y M+ + EV + G +S Q GD+ ++ ++ + D V N+LI M+
Sbjct: 327 GLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMY 386
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
++CG +D + F+ + NK+ IS++ +I A A HG++QEA+ F M ++ P+++TF+
Sbjct: 387 ARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFV 446
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
G+L+ACSHGGL+EDG F+ M ++ +KP EH CMVDLLGR G L KA LI D
Sbjct: 447 GLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPM 506
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D WGAL+GAC++H + E+G++A + LLEL G L++N+ +W+D + +
Sbjct: 507 KPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRL 566
Query: 471 KMMISETEKKKSPGCSWI 488
+ ++ + KK G S I
Sbjct: 567 RKLMRDRGTKKDMGVSSI 584
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A R F R+ + D +Y+S+I A+++ G QEAL + + GI PN+ T VL ACS
Sbjct: 60 ARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSR 119
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
E + ++ ++ + ++ +G L + L + + +W
Sbjct: 120 ARAAEHALATHGVAIKLGYVRQVFVG-NALLHSSASAGSLRDSRRLFAEMAPHRNVVSWN 178
Query: 419 ALLGAC 424
++G C
Sbjct: 179 TMIGGC 184
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 262/491 (53%), Gaps = 32/491 (6%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL-----PGDNLSYARQVFDQIP 63
+ ++ +QL+Q HS +++ H+ + L+ D L+YA ++FD IP
Sbjct: 31 KCQSMSQLRQYHSQIIRLGLSSHNH------LIPPLINFCARASTSDALTYALKLFDSIP 84
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQS---ILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
+ FL+ ++I+ LH+ + +LLY+ M + VL + FTF S+L AC ++
Sbjct: 85 Q-PDAFLYNTIIKG-FLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKI---- 138
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+ G+ A LF + + ++++ Y ++ A+ + + +SV
Sbjct: 139 --------QHGMQIHAH-LFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSV 189
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+W ++I+GY K G + EA +F + + +++ W AM YVQ A ++ M+ EN
Sbjct: 190 SWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAEN 249
Query: 241 VRI-SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ + +SACT LG ++ + +++ + + ++ A++ M+ KCG L+ A
Sbjct: 250 NNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKA 309
Query: 300 WREFSRIK--NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
+ F + + + S++ MI A HG + A+ +F +M + + P+ +TF+ +LTAC+
Sbjct: 310 LQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACA 369
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
H GLVE+G F M RV+GI+P EH CMVDLLGR+G + +A LI + D
Sbjct: 370 HSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVL 429
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
G LLGACK H N ELGE R ++EL P +G LLAN+YA+ GKW+D+ V+ ++ +
Sbjct: 430 GTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDR 489
Query: 478 EKKKSPGCSWI 488
KK+PG S I
Sbjct: 490 GVKKAPGFSMI 500
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 239/437 (54%), Gaps = 33/437 (7%)
Query: 72 TSLIRNHVLHAHFR-----QSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICG 126
T+ + NHV+ + R +++ Y M GFT SS+L+ACAR G
Sbjct: 5 TTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACAR---------GG 55
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
K G A L NV ++++ YA G ++ A+ +D M +++ V+W +M+
Sbjct: 56 LVKEGEQVHATVLVKGYCS-NVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSML 114
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
AGY +C + A++VFD + + W M +NG ++ A+ ++ MR+ V + +V
Sbjct: 115 AGYVRCADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQV 174
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDR-----TNYVSNALIHMHSKCGYLDLAWR 301
A+V A+SAC +LGD+++ + +V + R + ++NALIHM++ CG L A++
Sbjct: 175 ALVAALSACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQ 234
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-----RNEGIEPNQVTFIGVLTAC 356
F ++ K +S++SMI AFA G +EALD+F M + +G+ P+++TFIGVL AC
Sbjct: 235 VFVKMPRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCAC 294
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
SH G V++G + F M +GI P EH CMVDLL R+G L++A LI +
Sbjct: 295 SHAGFVDEGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAI 354
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA-----LLANIYASMGKWKDSEIVK 471
WGALLG C++H N+EL L+ PE G+ A LL+NIYA +W+D V+
Sbjct: 355 WGALLGGCRIHRNSELASQVENKLV---PELNGDQAAGYLVLLSNIYAFGQRWQDVITVR 411
Query: 472 MMISETEKKKSPGCSWI 488
+ E KK PG SWI
Sbjct: 412 QKMIEMGVKKPPGRSWI 428
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 46/215 (21%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD +P C+ WT+++ + RQ++LL+ +M R V + L+ACA
Sbjct: 126 ARRVFDVMP-CRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALSACA 184
Query: 115 RVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISW-SAMVAGYANCGNMKAAKEFYD 172
+ L L I Y + QR ++ + +A++ YA+CG + A + +
Sbjct: 185 ELGDLKLGRWIHWYVQ-------QRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFV 237
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+M K++V+W +MI + K G K A+++
Sbjct: 238 KMPRKSTVSWTSMIMAFAK-------------------------------QGLGKEALDL 266
Query: 233 YKVM-----RQENVRISEVAMVGAISACTQLGDVE 262
+K M + + VR E+ +G + AC+ G V+
Sbjct: 267 FKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVD 301
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 237/438 (54%), Gaps = 18/438 (4%)
Query: 56 RQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR-LGVLTSGFTFSSVLNACA 114
+ +FD++P + W +I +V F +I ++ +M G++ T S L+AC
Sbjct: 192 KMLFDEMPD-RDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACT 250
Query: 115 RVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
+ L L I Y + D++ +I +A++ Y CG + A+ ++
Sbjct: 251 ALKRLELGKKIHHYVR-----------DNVKFTPIIG-NALLDMYCKCGCLSIARAVFEE 298
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M KN + W M++GY CGE+ EA+++F+ D W AM YVQ A+ ++
Sbjct: 299 MPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALF 358
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M+ V+ + +V ++ C Q G +E + + +DE V ALI M++KC
Sbjct: 359 REMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKC 418
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G+++ A F ++ KD S++S+I A +GK+ +AL++F KM+ G+ P+ +TFIGVL
Sbjct: 419 GFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVL 478
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
+ACSHGGLVE+G K F M + IKP EH C+VDLLGR+G L +A LI D
Sbjct: 479 SACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENK 538
Query: 414 AGT---WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
A T +G+LL AC+++ N E+GE A+ L++ + LLANIYA +W+D V
Sbjct: 539 AITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKV 598
Query: 471 KMMISETEKKKSPGCSWI 488
+ + + KK+PGCS I
Sbjct: 599 RRKMKDLGVKKTPGCSSI 616
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G + A+K+F I P + + + + G K + ++ +R++ +
Sbjct: 85 GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
A LG+V A L V + + YV N+LI M+++ D+ F + ++DVI
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVI 204
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHGGLVEDGCK 367
S++ MI+ + + ++A+++F +M+ E G+ P++ T + L+AC+ +E G K
Sbjct: 205 SWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKK 260
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L+ A + F I+ ++ Y+ +I AFA G + L +F K+R +G+ P+ T+ V
Sbjct: 85 GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
A + G V K L+T+ G++ T ++D+ + L ++ D D
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKT-GLEFDTYVRNSLIDMYAQLA-LTDVMKMLFDEMPDRD 202
Query: 414 AGTWGALLGA 423
+W ++
Sbjct: 203 VISWNVMISG 212
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 212/374 (56%), Gaps = 2/374 (0%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
L ++I GY + A+R FD ER+++ W+ M++GY GNM A+ +D+M ++
Sbjct: 61 LWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRD 120
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
++W ++ GY G++ ++VFD++ E + W + Y QNG + +K M
Sbjct: 121 VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD 180
Query: 239 E-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSNALIHMHSKCGYL 296
E +V ++ M +SAC +LG + + K+ + ++ + V NALI M+ KCG +
Sbjct: 181 EGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAI 240
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
++A F IK +D+IS+++MI A HG EAL++F +M+N GI P++VTF+GVL AC
Sbjct: 241 EIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
H GLVEDG F M F I P EH C+VDLL R+G L +A I DA
Sbjct: 301 KHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVI 360
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
W LLGA KV+ ++GE+A L++L P N +L+NIY G++ D+ +K+ + +
Sbjct: 361 WATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRD 420
Query: 477 TEKKKSPGCSWISS 490
T KK G SWI +
Sbjct: 421 TGFKKEAGVSWIET 434
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 243/455 (53%), Gaps = 22/455 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++P + WT +I ++ + +L+ M R GV + T + +L AC
Sbjct: 219 ARKLFDKMPD-RNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACG 277
Query: 115 RVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
L ++I Y++ +D A + FD M ++++++W++
Sbjct: 278 SFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNS 337
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
++ GY GN++ A ++ M +K+ V+W +I G+ G + E +F + E DA W
Sbjct: 338 LITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAW 397
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
A+ V + A + M Q ++ + + +SA + + + V +
Sbjct: 398 TAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTK 457
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+ + N+L+ M+SKCG +D A + F IK +V++Y+++IT A +G +EAL++
Sbjct: 458 MSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEI 517
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F KM+++ + PN +TF+GVL+AC H GLVE+G + F+LM ++ I+P +H CMVDLL
Sbjct: 518 FTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLC 577
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R+G ++A SL+ G WGA+LGA H+ ++ E+AA++L EL P +
Sbjct: 578 RAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVI 637
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+N+++ G + E++++M KKSPGCSWI
Sbjct: 638 LSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWI 672
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 168/337 (49%), Gaps = 57/337 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSIL-----LYAKMHR-----LGVLT 101
++ AR+VF++IP N ++ A+ R++++ L++ M + +
Sbjct: 94 INKAREVFNKIPDPNVASY------NAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMI 147
Query: 102 SGFTFSSVLNACARV----PSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
+GF + + + ++ P ++ + +I GY+K+G ++DA R+FD MAE++V+SWS+M+
Sbjct: 148 TGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMI 207
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
+G G + A++ +D+M ++N VTW MI GY
Sbjct: 208 SGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGY-------------------------- 241
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
M + ++++G+ ++ MR+E V ++ + + AC + V
Sbjct: 242 MKMNFLKDGFI-----LFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLG 296
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
D Y++N++I M+S+C +D A ++F + KD+++++S+IT + G ++A+ +F
Sbjct: 297 FDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFE 356
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
M + + V++ ++ + G +++ F++M
Sbjct: 357 NMPQKDV----VSWTTLICGFASEGRIDEFIGLFQMM 389
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 21/290 (7%)
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
+K G D A R + + ++ ++ + G +K A+ ++RM KN+V+W A++
Sbjct: 30 SKRGNFDSATR---QKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLT 86
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y + E+ +A++VF++I +P+ + + AM Y + A E++ M Q N V+
Sbjct: 87 AYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRN----SVS 142
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
I+ G +MA L H ++ SN LI+ +SK G ++ A R F +
Sbjct: 143 YATMITGFVHAGMFDMAEKL--HREKPVI----VSSNVLINGYSKVGRVEDAVRIFDGMA 196
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
KDV+S+SSMI+ GK EA +F KM + N VT+ ++ ++DG
Sbjct: 197 EKDVVSWSSMISGLCRVGKIVEARKLFDKMPDR----NVVTWTLMIDGYMKMNFLKDGFI 252
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLG---RSGQLEKAHSLIMDYKDFCDA 414
F M R G++ LT +++ G R G+ + H L++ DA
Sbjct: 253 LFLNMRRE-GVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDA 301
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 248/476 (52%), Gaps = 18/476 (3%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K+VHS++L+ +Y + + D L AR +FD++P+ T W +++
Sbjct: 128 KEVHSFILRRGL----EYDIFVVNALITFYSRCDELVLARIMFDRMPERDT-VSWNAMLA 182
Query: 77 NHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDD 135
+ + + L+ M + V + T SVL ACA+ L + +
Sbjct: 183 GYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGI-----------E 231
Query: 136 AQRLF-DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
R +S + +V W+A++ YA CG + A+E ++ M EK+ +T+ +MI+GY G
Sbjct: 232 VHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGF 291
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V +A +F E P W A+ VQN + A+++++ M+ R + V + +
Sbjct: 292 VNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPV 351
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
+ ++ + + DR YV+ A+I ++KCGYL A F +IK + +I++
Sbjct: 352 FSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAW 411
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+S+I+A+A HG + AL +F +M GI+P+QVTF VL AC+H G +++ K F ++
Sbjct: 412 TSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLP 471
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+GI+PL EH CMV +L R+G+L A I A WGALL V + ELG+
Sbjct: 472 EYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGK 531
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
L E+ PE TGN ++AN+Y+ G+WKD++ ++ ++ E KK PG SWI +
Sbjct: 532 YVFDRLFEIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIET 587
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ Y K G +R+A VF +I + W A+ + Y + ++++ + N
Sbjct: 44 LISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDV 103
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR----TNYVSNALIHMHSKCGYLDLAW 300
+ + L + + LAK V R +V NALI +S+C L LA
Sbjct: 104 KPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLAR 163
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHG 359
F R+ +D +S+++M+ ++ G +E ++F M + ++PN +T + VL AC+
Sbjct: 164 IMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQS 223
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
+ G + + IK ++ L + G L+ A L + + D T+ +
Sbjct: 224 NDLTFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGILDYARELFEEMPE-KDGITYCS 281
Query: 420 LLGACKVH 427
++ VH
Sbjct: 282 MISGYMVH 289
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 250/480 (52%), Gaps = 23/480 (4%)
Query: 15 QLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
+LKQ+H+ +LK+ L P YA L SYA VF FLW
Sbjct: 26 ELKQIHARMLKSGLLQDP------YAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWN 79
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICGYTKI 130
+IR +S+LLY +M + +TF +L AC+ + + E + TK
Sbjct: 80 LMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKF 139
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G D + + ++++ YA GN K A +DR+ E ++V+W ++I GY
Sbjct: 140 GYGHD------------IYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYV 187
Query: 191 KCGEVREAKKVFDEISEPD-ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
K GE+ A +F ++ E + A W M YVQ G K A++++ M+ NV V++
Sbjct: 188 KAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLA 247
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
A+SAC+QLG +E + + ++ + + LI M++KCG ++ A F +K K
Sbjct: 248 SALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTK 307
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
V ++++I+ +A HG +EA+ FL+M+N G++PN +TF VLTACS+ GLVE+G F
Sbjct: 308 SVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVF 367
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
+ R + +KP EH CMVDLLGR+G L +A+ I +A WG+LL AC++H N
Sbjct: 368 NTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKN 427
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
ELGE L+E+ G +ANI+A KW + + ++ E K PGCS IS
Sbjct: 428 IELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAIS 487
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 239/436 (54%), Gaps = 14/436 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +VF +P K W ++I L +++LL+ +M V + T SVL+ACA
Sbjct: 227 AHRVFTNMPG-KDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACA 285
Query: 115 RVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
+ L IC Y + ++ ++I +AM+ Y CG + AK+ +++
Sbjct: 286 KKIDLEFGRWICSYIE-----------NNGFTEHLILNNAMLDMYVKCGCINDAKDLFNK 334
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M+EK+ V+W M+ G+ K G EA +FD + + W A+ Y QNG + A+ ++
Sbjct: 335 MSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLF 394
Query: 234 KVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
M+ ++ + EV ++ A+ A QLG ++ + ++ + + +++ +L+ M++K
Sbjct: 395 HEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAK 454
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG L+ A F ++ KDV +S+MI A A +G+ + ALD+F M I+PN VTF +
Sbjct: 455 CGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNI 514
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L AC+H GLV +G + FE M ++GI P +H C+VD+ GR+G LEKA S I
Sbjct: 515 LCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPP 574
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
A WGALLGAC H N EL E+A ++LLEL P G LL+NIYA G W+ ++
Sbjct: 575 TAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRK 634
Query: 473 MISETEKKKSPGCSWI 488
++ +++ KK P CS I
Sbjct: 635 LMRDSDVKKEPWCSSI 650
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 187/445 (42%), Gaps = 85/445 (19%)
Query: 15 QLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
QLKQ+H+++L+T P+ + I L YA+ VF+QIP+ + W
Sbjct: 87 QLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSC----LIYAKNVFNQIPQ-PNLYCWN 141
Query: 73 SLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
+LIR + + QS L++ M H + FTF + A +R L+ + G G
Sbjct: 142 TLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASR----LKVLHLGSVLHG 197
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
++ A D ++I++ YG
Sbjct: 198 MVIKASLSSDLFILNSLINF-------------------------------------YGS 220
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
G A +VF + D W AM + G A+ +++ M ++V+ + + MV
Sbjct: 221 SGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSV 280
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+SAC + D+E + +++ ++NA++ M+ KCG ++ A F+++ KD+
Sbjct: 281 LSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDI 340
Query: 312 ISYSSM-------------------------------ITAFADHGKSQEALDMFLKMR-N 339
+S+++M I+A+ +GK + AL +F +M+ +
Sbjct: 341 VSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLS 400
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL-TCMVDLLGRSGQL 398
+ +P++VT I L A + G ++ G + + I L HL T ++D+ + G L
Sbjct: 401 KDAKPDEVTLICALCASAQLGAIDFG-HWIHVYIKKHDIN-LNCHLATSLLDMYAKCGNL 458
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGA 423
KA + + D W A++GA
Sbjct: 459 NKAME-VFHAVERKDVYVWSAMIGA 482
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 135/313 (43%), Gaps = 30/313 (9%)
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
+M F D T +T A+ C + AK VF++I +P+ CW + Y
Sbjct: 93 AHMLRTSRFCDPYTASKLLTAYAI----SSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYA 148
Query: 222 QNGYAKAAIEMYKVMRQENVRI-SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
+ + ++ M ++ A ++L + + ++L V +
Sbjct: 149 SSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDL 208
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
++ N+LI+ + G DLA R F+ + KDV+S+++MI AFA G +AL +F +M +
Sbjct: 209 FILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMK 268
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDG---CKQFELMTRVFGIKPLTEHL---TCMVDLLGR 394
++PN +T + VL+AC+ +E G C E TEHL M+D+ +
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGRWICSYIE-------NNGFTEHLILNNAMLDMYVK 321
Query: 395 SGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARH-LLELGPEK-TGN 450
G + A L M KD +W +L +A+LG H + + P K T
Sbjct: 322 CGCINDAKDLFNKMSEKDIV---SWTTMLDG-----HAKLGNYDEAHCIFDAMPHKWTAA 373
Query: 451 SALLANIYASMGK 463
L + Y GK
Sbjct: 374 WNALISAYEQNGK 386
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 231/424 (54%), Gaps = 40/424 (9%)
Query: 98 GVLTSGFTFSSVLNACARVPSLL--EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
G L + V +CA V ++ VI GY K G M+ A+R+FD M RN +SWS MV
Sbjct: 141 GALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMV 200
Query: 156 AGYANCGNMKAAKEFYDRMTE--KNSVTWVAMIAGYGKCGEVREAKKVFDEIS------- 206
GYA G + A+E +DRM +N VTW +M+ G+ + G + A+K+FDE+
Sbjct: 201 GGYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSW 260
Query: 207 ------------------------EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NV 241
E D W M Y Q G + +E+++ M+ E NV
Sbjct: 261 NAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNV 320
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN--YVSNALIHMHSKCGYLDLA 299
+ +EV MV +SAC L +E + +D+ N + ALI M++KCG D+A
Sbjct: 321 QPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIA 380
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F+ + K+V +++++IT A +G +++++D F +M+ G +PN +TF+GVLTACSHG
Sbjct: 381 VKIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHG 440
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV++G + F+ M G++P +H CMVD+LGR+G LE+A LI D +GA
Sbjct: 441 GLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGA 500
Query: 420 LLGACKVHVNAELGEIAAR--HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
LLGAC++H ++ E H L L +++G L+++IYA+ GKW D + ++ +
Sbjct: 501 LLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRS 560
Query: 478 EKKK 481
+K
Sbjct: 561 GIRK 564
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 265/549 (48%), Gaps = 78/549 (14%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYH---YYAQFLIRLLQLPGDNLSYARQVFDQI 62
L+P +F ++VH +++K + +H + LI + G +L+ AR +FD+I
Sbjct: 136 LIP---SFLLGQEVHGFVVK------NGFHGDVFVCNALIMMYSEVG-SLALARLLFDKI 185
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR------- 115
K W+++IR++ +++ L MH + V S S+ + A
Sbjct: 186 EN-KDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLG 244
Query: 116 -----------------VPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
VP L A+I Y K + A+R+FD +++ ++ISW+AM+A Y
Sbjct: 245 KAMHAYVMRNGKCGKSGVP-LCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAY 303
Query: 159 ANCGNMKAAKEFYDRM----------------------------------TEKNSVTW-- 182
+C N+ + +M T +N T
Sbjct: 304 IHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL 363
Query: 183 ---VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
A I YGKCG+VR A+ VFD D W+AM Y QN A +++ M
Sbjct: 364 VLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGC 423
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+R +E MV + C + G +EM + ++D+ + + + M++ CG +D A
Sbjct: 424 GIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTA 483
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
R F+ ++D+ +++MI+ FA HG + AL++F +M G+ PN +TFIG L ACSH
Sbjct: 484 HRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHS 543
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GL+++G + F M FG P EH CMVDLLGR+G L++AH LI + +G+
Sbjct: 544 GLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGS 603
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
L ACK+H N +LGE AA+ L L P K+G + L++NIYAS +W D ++ + +
Sbjct: 604 FLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGI 663
Query: 480 KKSPGCSWI 488
K PG S I
Sbjct: 664 VKEPGVSSI 672
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 202/508 (39%), Gaps = 87/508 (17%)
Query: 12 TFNQLKQVHSYLLK-TLTKPHDQYHYYAQFL-IRL---LQLPGDNLSYARQVFDQIPKCK 66
+F Q HS LK T ++P + Q L I L QL G + + ++P
Sbjct: 22 SFQNTNQYHSPTLKFTQSQPKPNVPHIQQELHINLNETQQLHGHFIKTSSNCSYRVPLAA 81
Query: 67 TQ----------FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV 116
+ FL TS I+N+ + +YA M F SVL AC +
Sbjct: 82 LESYSSNAAIHSFLITSYIKNNCP----ADAAKIYAYMRGTDTEVDNFVIPSVLKACCLI 137
Query: 117 PSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
PS L A+I Y+++G + A+ LFD + ++V+SWS M+
Sbjct: 138 PSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMI 197
Query: 156 AGYANCGNMKAAKEFYDRMTEKN---------SVTWV----------------------- 183
Y G + A + M S+T V
Sbjct: 198 RSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKC 257
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
A+I Y KC + A++VFD +S+ W AM Y+ + ++
Sbjct: 258 GKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFV 317
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M E + +E+ M+ + C G +E+ +L + ++ A I M+ KCG
Sbjct: 318 KMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCG 377
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A F K+KD++ +S+MI+++A + EA D+F+ M GI PN+ T + +L
Sbjct: 378 DVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLM 437
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
C+ G +E G K GIK T VD+ G ++ AH L + D D
Sbjct: 438 ICAKAGSLEMG-KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDR-DI 495
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLE 442
W A++ +H + E AA L E
Sbjct: 496 SMWNAMISGFAMHGHGE----AALELFE 519
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 243/450 (54%), Gaps = 22/450 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR +FD++P+ + ++ +V + ++ L+ +M + +++++++
Sbjct: 252 ISDARDLFDRMPE-RNVVACNVMLDGYVRLSRLEEACKLFDEMPG----KNSISWTTIIS 306
Query: 112 ACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
AR L EA ++ GY + +++DA+++FD M + + W+ M
Sbjct: 307 GLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTM 366
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
++GY G ++ A + RM K++V+W MIAGY + G++R+A +F +S + W
Sbjct: 367 ISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWN 426
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
++ +VQNG A + +MR+ R + AC L + + L +
Sbjct: 427 SVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRS 486
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
+ NALI ++KCG + A + F + KD++S+++++ +A +G+ EA+ +F
Sbjct: 487 GHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVF 546
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
+M G+ P++VTF+G+L+ACS GL+++G F MT + +KP+ EH CM DLLGR
Sbjct: 547 REMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGR 606
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+G+L +A L+ + +AG WGALLGAC+++ N EL +AA L EL P + N LL
Sbjct: 607 AGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAAEKLSELEPCRASNYVLL 666
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPG 484
+NI A GKW ++E + I E K PG
Sbjct: 667 SNISAEAGKWDEAEKARASIKEKGANKPPG 696
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 40/335 (11%)
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
T L R+ L A R L+ M R +T ++S+L+A AR G
Sbjct: 26 TRLARSGQLAAARR----LFDSMPRRNTVT----YNSMLSALAR--------------HG 63
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
+D+A+ LFD M RN +SW+AM+A ++ G + A+ +DRM ++ +W M++ Y +
Sbjct: 64 RIDEARALFDGMPSRNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYAR 123
Query: 192 CGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
GE+ A+ V D + + +C+ AM Y +NG A+++ + M ++ +
Sbjct: 124 AGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDL----FSWNS 179
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
A++ TQ G + A + DE ++ N ++ + G LD A F RI++ +
Sbjct: 180 ALAGLTQSGQMVRA---VQFFDE-MVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPN 235
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
V+S+ +++ + G+ +A D+F +M + V G + +E+ CK F+
Sbjct: 236 VVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSR----LEEACKLFD 291
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
M I T ++ L R+G+L++A L+
Sbjct: 292 EMPGKNSIS-----WTTIISGLARAGKLQEAKDLL 321
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 163/406 (40%), Gaps = 81/406 (19%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD +P + W ++I H + L+ +M F+++ +++ A
Sbjct: 68 ARALFDGMPS-RNAVSWNAMIAALSDHGRVADARGLFDRMPS----RDDFSWTVMVSCYA 122
Query: 115 RVPSL------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
R L A+I GY K G DDA +L M ++ SW++ +A
Sbjct: 123 RAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALA 182
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
G G M A +F+D M EK+ V+W M+ G+ + G++ A F I P+ W +
Sbjct: 183 GLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTL 242
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENV--------------RISE-------------VAMV 249
Y + G A +++ M + NV R+ E ++
Sbjct: 243 LNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWT 302
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCD----------RTNYVS---------------- 283
IS + G ++ A L + C + N V+
Sbjct: 303 TIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVC 362
Query: 284 -NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
N +I + + G L+ A F R+ NKD +S+++MI +A G+ ++A+ +F +M +
Sbjct: 363 WNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRK-- 420
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
N V++ V++ GL D F LM R + + +C+
Sbjct: 421 --NTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCL 464
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 13/127 (10%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+ SN + ++ G L A R F + ++ ++Y+SM++A A HG+ EA +F M +
Sbjct: 19 FRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSR 78
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQL 398
N V++ ++ A S G V D F+ M P + T MV R+G+L
Sbjct: 79 ----NAVSWNAMIAALSDHGRVADARGLFDRM-------PSRDDFSWTVMVSCYARAGEL 127
Query: 399 EKAHSLI 405
E A ++
Sbjct: 128 ELARDVL 134
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 214/395 (54%), Gaps = 39/395 (9%)
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNM----KAAKEFYDRMTEKNSVTW------ 182
+ DA LFD M ++N +SWS M+ G+ G K KE + ++ T
Sbjct: 1131 LTDAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKA 1190
Query: 183 -----------------------------VAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
A++ Y KC + +AK +FD + D W
Sbjct: 1191 CRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTW 1250
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
M Y + G AK ++ ++ +R+E ++AMV ++AC +LG + A + ++V+
Sbjct: 1251 TVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNR 1310
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+ A+I M++KCG +D A F + +K+VIS+S+MI A+ HG+ ++AL++
Sbjct: 1311 NRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALEL 1370
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F M + GI PN +TF+ +L ACSH GLVEDG LM FG++P +H TCMVDLLG
Sbjct: 1371 FPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLG 1430
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R+GQL +A I + D G W +LLGAC++H +L E AA+ LLEL P+ GN L
Sbjct: 1431 RAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYIL 1490
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+NIYA+ G+WKD ++ ++++ + KK PG +WI
Sbjct: 1491 LSNIYANAGQWKDVAKIRDLMTKRKLKKIPGYTWI 1525
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 166/388 (42%), Gaps = 70/388 (18%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ A +FD++P+ K W+ +I V F Q + ++ R GV +T V+
Sbjct: 1131 LTDAYALFDEMPQ-KNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIK 1189
Query: 112 ACARVPSL----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVIS 150
AC +L L+ +C Y K +++DA+ LFD M +++++
Sbjct: 1190 ACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVT 1249
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEK----------------------NSVTWV----- 183
W+ M+ GYA CGN K + +D + E+ N +V
Sbjct: 1250 WTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVN 1309
Query: 184 ------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
AMI Y KCG+V A+++FD + + W+AM Y +G K A+E
Sbjct: 1310 RNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALE 1369
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA-LIHMH 290
++ +M + + + V + AC+ G VE L + E R + + ++ +
Sbjct: 1370 LFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLL 1429
Query: 291 SKCGYLDLAWREFSRIK-NKDVISYSSMITAFADHGK---SQEALDMFLKMRNEGIEPNQ 346
+ G L A+R + KD +SS++ A H + +++A L+++ + N
Sbjct: 1430 GRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQ----NP 1485
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTR 374
+I + ++ G +D K +LMT+
Sbjct: 1486 GNYILLSNIYANAGQWKDVAKIRDLMTK 1513
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 212/374 (56%), Gaps = 2/374 (0%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
L ++I GY + A+R FD ER+++ W+ M++GY GNM A+ +D+M ++
Sbjct: 8 LWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRD 67
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
++W ++ GY G++ ++VFD++ E + W + Y QNG + +K M
Sbjct: 68 VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD 127
Query: 239 E-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSNALIHMHSKCGYL 296
E +V ++ M +SAC +LG + + K+ + ++ + V NALI M+ KCG +
Sbjct: 128 EGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAI 187
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
++A F IK +D+IS+++MI A HG EAL++F +M+N GI P++VTF+GVL AC
Sbjct: 188 EIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 247
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
H GLVEDG F M F I P EH C+VDLL R+G L +A I DA
Sbjct: 248 KHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVI 307
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
W LLGA KV+ ++GE+A L++L P N +L+NIY G++ D+ +K+ + +
Sbjct: 308 WATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRD 367
Query: 477 TEKKKSPGCSWISS 490
T KK G SWI +
Sbjct: 368 TGFKKEAGVSWIET 381
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 243/438 (55%), Gaps = 18/438 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++P+ K W +++ H ++ +++ Y++ +LG+ +GF+F+ VL C
Sbjct: 145 ARKLFDKMPE-KDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCV 203
Query: 115 RVPSLLEAVICGYTKIGLMDDAQ-RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
++ ++GL ++ + NV+ S+++ Y CG M A++ +D
Sbjct: 204 KL-----------KEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDE 252
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M+ ++ + W M++GY K G+++ A ++F E+ E + W A+ Y +NG A+E++
Sbjct: 253 MSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELF 312
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M +VR + + AC + ++ + ++ V +ALI M+SKC
Sbjct: 313 TKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKC 372
Query: 294 GYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
G L + + F + NK DV+ ++++I+A A HG +EA+ M M G +P+++TF+ +
Sbjct: 373 GSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVI 432
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKD 410
L ACSH GLV+ G FE M+ +GI P EH C++DLLGR+G E+ + M YK
Sbjct: 433 LNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKP 492
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D W ALLG C++H + ELG AA L+EL P+ + LL++IYA +G+W+ + V
Sbjct: 493 --DDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKV 550
Query: 471 KMMISETEKKKSPGCSWI 488
+ +++E + KK SW+
Sbjct: 551 RQLMNERQVKKERAISWL 568
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 137/305 (44%), Gaps = 32/305 (10%)
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
++ YA CG A++ +D+M+ +N +W M++GY K G ++ A+K+FD++ E D W
Sbjct: 101 LINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSW 160
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
M + + Q GY A+ Y RQ ++ + + G ++ C +L +V + + +
Sbjct: 161 NTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILV 220
Query: 274 GCCDRTNYVSNALIHMHSKCGYLD--------------LAWRE----------------- 302
+S++++ + KCG + LAW
Sbjct: 221 AGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANEL 280
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + K+ +S++++I+ +A +G +AL++F KM + P+Q TF L AC+ +
Sbjct: 281 FVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASL 340
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
+ G KQ +P T ++ ++D+ + G L + + D W ++
Sbjct: 341 KHG-KQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIIS 399
Query: 423 ACKVH 427
A H
Sbjct: 400 ALAQH 404
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 31/237 (13%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H+YLL+ +P+ LI + G +L R+VFD + LW ++I
Sbjct: 344 KQIHAYLLRINFQPNT---IVVSALIDMYSKCG-SLGIGRKVFDLMGNKLDVVLWNTIIS 399
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
H ++I + M R G TF +LNAC+ GL+
Sbjct: 400 ALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHS--------------GLVQQG 445
Query: 137 QRLFDSMA-ERNVIS----WSAMVAGYANCGNMKAAKEFYDRMTEK------NSVTWVAM 185
F+SM+ + ++ ++ ++ G + + ++M K N++ V
Sbjct: 446 LNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCR 505
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
I G+ + G R+A + E+ ++ + ++ Y G ++ ++ ++M + V+
Sbjct: 506 IHGHIELG--RKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVK 560
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 217/401 (54%), Gaps = 39/401 (9%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN----------------------- 163
Y+ +DDA LFD M R+ +SWS MV G+A G+
Sbjct: 780 YSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTL 839
Query: 164 ---MKAAKEF-------------YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
++A ++ Y + + A++ YGKC E+ +A+ +FD++ E
Sbjct: 840 PFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXE 899
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W M Y + G A ++ ++ MR+E V +VAMV + AC +LG + A +
Sbjct: 900 RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI 959
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
++ + A+I MH+KCG ++ A F R++ K+VIS+S+MI A+ HG+
Sbjct: 960 DDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 1019
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++ALD+F M GI PN++T + +L ACSH GLVE+G + F M + ++ +H TC
Sbjct: 1020 RKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTC 1079
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
+VDLLGR+G+L++A LI D G WGA LGAC+ H + L E AA LLEL P+
Sbjct: 1080 VVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQN 1139
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
G+ LL+NIYA+ G+W+D ++ ++S+ KK PG +WI
Sbjct: 1140 PGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWI 1180
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 248/479 (51%), Gaps = 64/479 (13%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN-----------ACA 114
+TQF TSL LH +S +K H L L F S+++N A A
Sbjct: 34 ETQFRQTSL----NLHNREEES----SKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQA 85
Query: 115 RVPSLLEAVICG------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN----- 163
V +LE ++ Y+ +DDA LFD M R+ +SWS MV G+A G+
Sbjct: 86 SVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCF 145
Query: 164 ---------------------MKAAKEF-------------YDRMTEKNSVTWVAMIAGY 189
++A ++ Y + + A++ Y
Sbjct: 146 GTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMY 205
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
KC E+ +A+ +FD++ E D W M Y + G A ++ +++ MR+E V +VAMV
Sbjct: 206 VKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMV 265
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+ AC +LG + A I+ ++ + A+I M++KCG ++ A F R++ K
Sbjct: 266 TVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEK 325
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+VIS+S+MI A+ HG+ ++ALD+F M + G+ P+++T +L ACSH GLVE+G + F
Sbjct: 326 NVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFF 385
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M + ++ +H TC+VDLLGR+G+L++A LI D G WGA LGAC+ H +
Sbjct: 386 SSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKD 445
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L E AA LLEL + G+ LL+NIYA+ G+W+D ++ ++S+ KK+PG +WI
Sbjct: 446 VVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWI 504
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 158/413 (38%), Gaps = 107/413 (25%)
Query: 4 KYLVPRSKTFNQLKQVHSY-----LLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQV 58
K+ +P + T Q++QVH +L+ L + +Y+ + L A +
Sbjct: 744 KWFLPTNLT--QVRQVHXQASVHGMLQNLIVANKLVXFYSYY---------RALDDAYGL 792
Query: 59 FDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
FD + + W+ ++ + + ++ R G +T V+ AC + +
Sbjct: 793 FDGMC-VRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 851
Query: 119 L----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
L L+ +C Y K ++DA+ LFD M ER++++W+ M+ G
Sbjct: 852 LQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGG 911
Query: 158 YANCGNMKAAKEFYDRMTEK---------------------------------------N 178
YA CGN + +D+M E+ +
Sbjct: 912 YAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLD 971
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
+ AMI + KCG V A+++FD + E + W+AM Y +G + A++++ +M +
Sbjct: 972 VILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLR 1031
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+ +++ +V + AC+ G VE EG +
Sbjct: 1032 SGILPNKITLVSLLYACSHAGLVE----------EG------------------LRFFSX 1063
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
W ++S DV Y+ ++ G+ EAL + M E E F+G
Sbjct: 1064 MWEDYS--VRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG 1114
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 49/290 (16%)
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+N+I + +V Y+ + A +D M ++SV+W M+ G+ K G+ F E+
Sbjct: 768 QNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFREL 827
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
A R +N + V I AC L +++M
Sbjct: 828 IRCGA--------------------------RPDNYTLPFV-----IRACRDLKNLQMGR 856
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
++ V + D ++V AL+ M+ KC ++ A F ++ +D+++++ MI +A+ G
Sbjct: 857 LIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECG 916
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG------LVEDGC--KQFELMTRVFG 377
+ E+L +F KMR EG+ P++V + V+ AC+ G ++D K+F+L + G
Sbjct: 917 NANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDV-ILG 975
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
T M+D+ + G +E A I D + + +W A++ A H
Sbjct: 976 --------TAMIDMHAKCGCVESARE-IFDRMEEKNVISWSAMIAAYGYH 1016
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 151/406 (37%), Gaps = 105/406 (25%)
Query: 11 KTFNQLKQVHSY-----LLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
+ Q++QVH+ +L+ + + ++Y+ + L A +FD +
Sbjct: 73 RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYY---------RALDDAYGLFDGMC-V 122
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL------ 119
+ W+ ++ + + ++ R G +T V+ AC + +L
Sbjct: 123 RDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLI 182
Query: 120 ----------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
L+ +C Y K ++DA+ LFD M ER++++W+ M+ GYA CG
Sbjct: 183 HHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKA 242
Query: 165 KAAKEFYDRMTEK---------------------------------------NSVTWVAM 185
+ +++M E+ + + AM
Sbjct: 243 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 302
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I Y KCG V A+++FD + E + W+AM Y +G + A++++ +M + +
Sbjct: 303 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDK 362
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ + + AC+ G VE EG + W ++S
Sbjct: 363 ITLASLLYACSHAGLVE----------EG------------------LRFFSSMWEDYS- 393
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
DV Y+ ++ G+ EAL + M E E F+G
Sbjct: 394 -VRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLG 438
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 24/197 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++ + K W+++I + H R+++ L+ M R G+L + T S+L AC+
Sbjct: 991 AREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 1049
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAE-----RNVISWSAMVAGYANCGNMKAAKE 169
GL+++ R F M E +V ++ +V G + A +
Sbjct: 1050 HA--------------GLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALK 1095
Query: 170 FYDRMT-EKNSVTWVAMIAGYGKCGEVREAKKV---FDEISEPDASCWAAMTVCYVQNGY 225
MT EK+ W A + +V A+K E+ + + ++ Y G
Sbjct: 1096 LIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGR 1155
Query: 226 AKAAIEMYKVMRQENVR 242
+ ++ +M Q ++
Sbjct: 1156 WEDVAKIRDLMSQRRLK 1172
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 237/442 (53%), Gaps = 15/442 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+L A VF+ I + W S++ V + +++ L+ +M GV + T SV
Sbjct: 290 HLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSV 349
Query: 110 LNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
++ACA+ +L L +C Y M M NV + A + + CG ++ A+
Sbjct: 350 MSACAKTMNLTLGRKVCDYIDRNEM---------MMNLNVCN--ATIDMFVKCGEVEIAR 398
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+D M +++ V+W +I GY K E A+ +FD + D W + Y Q+G K
Sbjct: 399 GLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKE 458
Query: 229 AIEMYKVMR--QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
A+ +++ ++ + R +V ++ +SAC QLG +++ + ++ + ++ +L
Sbjct: 459 ALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSL 518
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+SK G ++ A F I NKDV +S+MI A HG+ + A+++FL M+ ++PN
Sbjct: 519 IDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNS 578
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
VTF +L ACSH GLV++G + F+ M RV+G+ P T+H +CMVD+LGR+G LE+A I
Sbjct: 579 VTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIE 638
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
A WGALLGAC +H N EL E A LLE+ P G LL+N+YA G W+
Sbjct: 639 GMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEG 698
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
++ + ++ KK GCS I
Sbjct: 699 VSELRQQMRDSGLKKETGCSSI 720
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 246/488 (50%), Gaps = 52/488 (10%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV------LTSGF 104
+LS A+ VFD++P+ WT+L+ L H ++ L+ M + LT
Sbjct: 38 DLSNAKGVFDRMPRWSLG-SWTALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLA 96
Query: 105 TFSSVLNACARVPSLLEAVICGYTKI-------GLMDDAQRLFDSMAERNVISWSAMVAG 157
TFS++ +A + E + +T + G M++A+ FD M ERN+ SW+++++
Sbjct: 97 TFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSA 156
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
Y G++KAA +D M E N V W AM+ GY G+V AK+ FD + E D W AM
Sbjct: 157 YGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAML 216
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI------------------------- 252
Y NG+ + E+++ M + ++ IS MV A+
Sbjct: 217 SAYAFNGHLRYTREIFQRMPERDL-ISWATMVAALVENDLLEESKELFDRMPRHCALSKG 275
Query: 253 ------------SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
AC+ LG + + V E D VSNAL++ + +CG L A
Sbjct: 276 MTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAK 335
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F ++ +DVIS+SSMI+AFA G+ EA++++ +M +EG P+ + FI VL ACS+ G
Sbjct: 336 IVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSG 395
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
+VE F + ++P EH CMVD+LGR+G+L A L+ + +
Sbjct: 396 VVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTM 455
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L ACK++ + E GE AA + EL PE + LANIY++ + KD+ ++ ++ E K
Sbjct: 456 LSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIK 515
Query: 481 KSPGCSWI 488
K PGCSWI
Sbjct: 516 KKPGCSWI 523
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 158/361 (43%), Gaps = 71/361 (19%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
+ ++G ++ A+++FD++A+R+ SW M++ YA G++ AK +DRM + +W A++
Sbjct: 2 FGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALL 61
Query: 187 AGYGKCGEVREAKKV-------------------------------FDEISEPDASCWAA 215
+ + G EAK + FD++ E D W A
Sbjct: 62 SAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTA 121
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA---------- 265
M + G + A E + M + N+ + +SA + GDV+ A
Sbjct: 122 MLAANAERGQMENARETFDQMPERNL----FSWTSLLSAYGRSGDVKAAGRVFDSMPEWN 177
Query: 266 -----------------ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+ AK + +R A++ ++ G+L F R+
Sbjct: 178 LVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPE 237
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMR-----NEGIEPNQVTFIGVLTACSHGGLVE 363
+D+IS+++M+ A ++ +E+ ++F +M ++G+ PN+VTFI +L ACS G +
Sbjct: 238 RDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALA 297
Query: 364 DGCK-QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
+G K + R F + + +V+ GR G L A ++ D D +W +++
Sbjct: 298 EGRKIHAAVAERGFDTDLVVSN--ALVNFYGRCGALGDA-KIVFDGMRRRDVISWSSMIS 354
Query: 423 A 423
A
Sbjct: 355 A 355
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 273/512 (53%), Gaps = 40/512 (7%)
Query: 9 RSKTFNQLKQVHSY--LLKTLTKPHD--QYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
R ++ +KQ+H+ L L+ P + + + + +R +++A VFDQIP+
Sbjct: 17 RCRSLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVR------GAIAHAYLVFDQIPR 70
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKM----HRLGVLTSGFTFSSVLNACARVPS-- 118
+F++ +LIR A R ++ LY +M GV TF VL AC + +
Sbjct: 71 -PDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGD 129
Query: 119 -------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
+ A+I + G + A LFD A + ++WSAM+ G A
Sbjct: 130 TGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCA 189
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
G++ AA++ +D K+ V+W MI Y K G++ A+++FD++ E D W M
Sbjct: 190 RRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISG 249
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
YV+ G A+E+++ M++ + V M+ +SAC GD+++ L + + R
Sbjct: 250 YVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSD-MFSRN 308
Query: 280 NY---VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+ + NALI M++KCG + A F +++KDV +++S++ A HG E++DMF K
Sbjct: 309 GFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEK 368
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M + P+++TF+ VL ACSHGG+V+ G + F LM + ++P +H CMVD+LGR+G
Sbjct: 369 MLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAG 428
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L++A I K ++ W LL AC+VH EL + A R LL+ +++G+ LL+N
Sbjct: 429 LLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSN 488
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
IYAS+G+W SE ++ ++ ++ K G +++
Sbjct: 489 IYASVGEWFGSEKMRKLMDDSGVNKEAGQTFV 520
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 258/488 (52%), Gaps = 20/488 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLL--KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
L+ T ++KQ+H+ L+ L PH ++ QF+ + NL YA ++ +
Sbjct: 15 LLNSCTTLKEMKQIHAQLVVKGILNNPH----FHGQFVATIALHNTTNLDYANKLLNH-N 69
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKM---HRLGVLTSGFTFSSVLNACARVPSLL 120
T F S+IR + + +S YA + + + +TF+ ++ CA+ L
Sbjct: 70 NNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQ----L 125
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+A + G G + D + + +V YA G + + +D E + V
Sbjct: 126 QAHVTGLCVHGAVIKHGFELDPHVQ------TGLVFMYAELGCLSSCHNVFDGAVEPDLV 179
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
T AM+ KCG++ A+K+FDE+ E D W AM Y Q G ++ A++++ +M+ E
Sbjct: 180 TQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEG 239
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V+++EV+MV +SACT L ++ + +V+ T + AL+ M++KCG +D A
Sbjct: 240 VKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAM 299
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
+ F +K ++V ++SS I A +G +E+LD+F M+ EG++PN +TFI VL CS G
Sbjct: 300 QVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVG 359
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LVE+G K F+ M V+GI P EH MVD+ GR+G+L++A + I G W AL
Sbjct: 360 LVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSAL 419
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L AC+++ N ELGEIA R ++EL + G LL+NIYA W+ ++ + K
Sbjct: 420 LHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVK 479
Query: 481 KSPGCSWI 488
K PGCS I
Sbjct: 480 KLPGCSVI 487
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/573 (29%), Positives = 278/573 (48%), Gaps = 105/573 (18%)
Query: 14 NQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPKCKTQFLWT 72
+ L+ +H+ ++KT H+ + ++ + + P D L YA VF+ I + +W
Sbjct: 1 SSLRMIHAQMIKT--GLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE-PNLLIWN 57
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE----------- 121
++ R H L + ++ LY M LG+L + +TF +L +CA+ + E
Sbjct: 58 TMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKL 117
Query: 122 -----------------------------------------AVICGYTKIGLMDDAQRLF 140
A+I GY G + AQ++F
Sbjct: 118 GYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMF 177
Query: 141 DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN---------SV----------- 180
D + ++V+SW+AM++GYA GN K A E + M + N SV
Sbjct: 178 DEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIE 237
Query: 181 ------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
+W+ A+I Y KCGEV A +F+ +S D W + Y
Sbjct: 238 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 297
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
K A+ +++ M + ++V M+ + AC LG +E+ + ++++ R
Sbjct: 298 HMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK----RLKG 353
Query: 282 VSNA------LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
V+NA LI M++KCG ++ A + F I N+ + S+++MI FA HG++ A D+F
Sbjct: 354 VANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFS 413
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRS 395
+MR IEP+ +TF+G+L+ACSH G+++ G F M + I P EH CM+DLLG S
Sbjct: 414 RMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHS 473
Query: 396 GQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLA 455
G ++A +I + D W +LL ACK+H N ELGE A++L+++ P+ G+ LL+
Sbjct: 474 GLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLS 533
Query: 456 NIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
NIYA+ G+W + ++ ++++ KK PGCS I
Sbjct: 534 NIYATAGRWNEVAKIRALLNDKGMKKVPGCSSI 566
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 262/535 (48%), Gaps = 66/535 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+ VH+ ++KTL P + A +LI + D+ AR V P + WTSL+
Sbjct: 26 RVVHARIVKTLDSPPPPF--LANYLINMYS-KLDHPESARLVLRLTP-ARNVVSWTSLVS 81
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVPSLLE-----AVICG--- 126
+ HF ++ + +M R GV + FTF V A A R+P + AV CG
Sbjct: 82 GLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 127 -----------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
Y K L DDA++LFD + ERN+ +W+A ++ G K A E +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFR 201
Query: 176 ----EKNSVTWVA-----------------------------------MIAGYGKCGEVR 196
+ NS+T+ +I YGKC ++R
Sbjct: 202 RIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
++ +F E+ +A W ++ YVQN + A +Y R+E V S+ + +SAC
Sbjct: 262 SSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACA 321
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
+ +E+ + H + C +R +V +AL+ M+ KCG ++ + + F + K++++ +S
Sbjct: 322 GMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNS 381
Query: 317 MITAFADHGKSQEALDMFLKM--RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+I +A G+ AL +F M R G PN +TF+ +L+ACS G VE+G K F+ M
Sbjct: 382 LIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKS 441
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+GI+P EH +C+VD+LGR+G +E+A I WGAL AC++H LG
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGI 501
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
+AA +L +L P+ +GN LL+N +A+ G+W ++ V+ + KK G SWI+
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWIT 556
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 168/577 (29%), Positives = 280/577 (48%), Gaps = 97/577 (16%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPK 64
L+ KT L+ +H+ ++K H+ + ++ + + P + L YA VF I +
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKI--GLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--- 121
+W ++ R H L + ++ LY M LG+L + +TF VL +CA+ + E
Sbjct: 97 -PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 122 -------------------------------------------------AVICGYTKIGL 132
A+I GY G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS-------VT---- 181
+++AQ+LFD + ++V+SW+AM++GYA GN K A E + M + N VT
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 182 ---------------WV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCW 213
W+ A+I Y KCGE+ A +F+ + D W
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+ Y K A+ +++ M + ++V M+ + AC LG +++ + ++D+
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 274 GCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
TN S +LI M++KCG ++ A + F+ I +K + S+++MI FA HG++ +
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
D+F +MR GI+P+ +TF+G+L+ACSH G+++ G F MT+ + + P EH CM+DL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
LG SG ++A +I + D W +LL ACK+H N ELGE A +L+++ PE G+
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+NIYAS G+W + + ++++ KK PGCS I
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/496 (31%), Positives = 260/496 (52%), Gaps = 21/496 (4%)
Query: 1 MTSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFD 60
T ++ R LK +H++ +T + HD + P +L YA ++FD
Sbjct: 8 FTLAHMAERCTCMRDLKLLHAHAFRT--RLHDHTVVLGKLFRFAAVSPLGDLRYAHRMFD 65
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
Q+P T F + +LIR H S L + M + V F+F+ +L + +R L
Sbjct: 66 QMPH-PTTFFYNTLIRAHAHSTTPSLSSLSFNLMRQNNVAPDQFSFNFLLKSRSRTTPLT 124
Query: 121 E--AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT--- 175
V K G R++ + ++ YAN G A+ ++ +
Sbjct: 125 HHNDVHGAVLKFGFC------------RHLHVQNGLIHFYANRGMTLLARRVFEDVLQLG 172
Query: 176 -EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E + V+W ++ + K GE+ A++VFDE+ + D W AM Y Q + A+E++
Sbjct: 173 LEVDVVSWSGLLVAHVKAGELEVARRVFDEMPQRDVVSWTAMLTGYSQAKRPREALELFG 232
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
MR+ V EV MV +SAC LGD+E ++ + V+E + NALI M+ KCG
Sbjct: 233 EMRRSGVWPDEVTMVSLVSACASLGDMETGMMVHRFVEENGFGWMVALCNALIDMYGKCG 292
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
L+ AWR F + K +I++++M+T A++G + EA +F M G+ P+ VT + +L
Sbjct: 293 CLEEAWRVFHGMTRKSLITWNTMVTVCANYGNADEAFRLFEWMVCSGVVPDSVTLLALLV 352
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
A +H GLV++G + FE M R +G++P EH ++D+LGR+G+L++A+ L+ + C+
Sbjct: 353 AYAHKGLVDEGIRLFESMDRDYGVEPRIEHYGAVIDMLGRAGRLQEAYDLLTNIPIPCND 412
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
WGALLGAC++H + E+GE + LLEL P++ G LL +IY + G+ ++ + +
Sbjct: 413 AVWGALLGACRIHGDVEMGEKLIKKLLELKPDEGGYYILLRDIYVAAGQTVEANETRQAM 472
Query: 475 SETEKKKSPGCSWISS 490
+ +K+PGCSW+
Sbjct: 473 LASRARKNPGCSWVEG 488
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 243/455 (53%), Gaps = 22/455 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++P + WT +I ++ + +L+ M R GV + T + +L AC
Sbjct: 227 ARKLFDKMPD-RNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACG 285
Query: 115 RVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
L ++I Y++ +D A + FD M ++++++W++
Sbjct: 286 SFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNS 345
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
++ GY GN++ A ++ M +K+ V+W +I G+ G + E +F + E DA W
Sbjct: 346 LITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAW 405
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
A+ V + A + M Q ++ + + +SA + + + V +
Sbjct: 406 TAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTK 465
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
+ + N+L+ M+SKCG +D A + F IK +V++Y+++IT A +G +EAL++
Sbjct: 466 MSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEI 525
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
F KM+++ + PN +TF+GVL+AC H GLVE+G + F+LM ++ I+P +H CMVDLL
Sbjct: 526 FTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLC 585
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R+G ++A SL+ G WGA+LGA H+ ++ E+AA++L EL P +
Sbjct: 586 RAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVI 645
Query: 454 LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+N+++ G + E++++M KKSPGCSWI
Sbjct: 646 LSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWI 680
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 168/337 (49%), Gaps = 57/337 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSIL-----LYAKMHR-----LGVLT 101
++ AR+VF++IP N ++ A+ R++++ L++ M + +
Sbjct: 102 INKAREVFNKIPDPNVASY------NAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMI 155
Query: 102 SGFTFSSVLNACARV----PSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
+GF + + + ++ P ++ + +I GY+K+G ++DA R+FD MAE++V+SWS+M+
Sbjct: 156 TGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMI 215
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
+G G + A++ +D+M ++N VTW MI GY
Sbjct: 216 SGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGY-------------------------- 249
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
M + ++++G+ ++ MR+E V ++ + + AC + V
Sbjct: 250 MKMNFLKDGFI-----LFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLG 304
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
D Y++N++I M+S+C +D A ++F + KD+++++S+IT + G ++A+ +F
Sbjct: 305 FDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFE 364
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
M + + V++ ++ + G +++ F++M
Sbjct: 365 NMPQKDV----VSWTTLICGFASEGRIDEFIGLFQMM 397
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 21/290 (7%)
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
+K G D A R + + ++ ++ + G +K A+ ++RM KN+V+W A++
Sbjct: 38 SKRGNFDSATR---QKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLT 94
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y + E+ +A++VF++I +P+ + + AM Y + A E++ M Q N V+
Sbjct: 95 AYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRN----SVS 150
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
I+ G +MA L + SN LI+ +SK G ++ A R F +
Sbjct: 151 YATMITGFVHAGMFDMAEKLHRE------KPVIVSSNVLINGYSKVGRVEDAVRIFDGMA 204
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
KDV+S+SSMI+ GK EA +F KM + N VT+ ++ ++DG
Sbjct: 205 EKDVVSWSSMISGLCRVGKIVEARKLFDKMPDR----NVVTWTLMIDGYMKMNFLKDGFI 260
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLG---RSGQLEKAHSLIMDYKDFCDA 414
F M R G++ LT +++ G R G+ + H L++ DA
Sbjct: 261 LFLNMRRE-GVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDA 309
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 207/359 (57%), Gaps = 1/359 (0%)
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G +D A+ +FD M E++ +SW+ M+ GYA G + A E + RM +N V+W +++ Y
Sbjct: 284 GEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYC 343
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
K G++ A+ +FD++ + W M Q G A ++ M++ + + VA+V
Sbjct: 344 KKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVS 403
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF-SRIKNK 309
++AC + G + + + +HV + R+ V NAL+ M KCG ++ A F + I K
Sbjct: 404 ILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEK 463
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
D +S++ +I FA HG ++AL++F +M+ +G P+ VT I VL+AC+H GLVE+G + F
Sbjct: 464 DSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFF 523
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M +GIKP EH CMVDLLGR G +++A +I + WG+LL AC++H N
Sbjct: 524 ANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKN 583
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E E+AA L L P GN A+L+NIYA GKW D ++ + T +K+ G SWI
Sbjct: 584 VEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWI 642
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 158/365 (43%), Gaps = 53/365 (14%)
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICG 126
T L +L+R + L++ ++ ++ M T FT+S ++ A A + + V
Sbjct: 171 TALLANTLLRAYALNSLPHAALAVFVDMPLRQRDT--FTYSFLIKALAT--AGVTPVRAA 226
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
+T + + + F +A++ Y+ + AK+ +D MT ++ V+W +
Sbjct: 227 HTHVFKLGSVEDTFVG---------NALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAM 277
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
A + GEV A+ +FDE+ E D W M Y + G A+ A E+++ M NV V
Sbjct: 278 AAMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNV----V 333
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+ +SA + GD+EMA ++ F ++
Sbjct: 334 SWSTVVSAYCKKGDMEMARVI-----------------------------------FDKM 358
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
K++++++ M++A A G EA +F +M+ IE + V + +L AC+ G + G
Sbjct: 359 PAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESGCLALG- 417
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
K+ R + T ++D+ + G + +A + D+ +W ++G +
Sbjct: 418 KRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIIIGGFAM 477
Query: 427 HVNAE 431
H + E
Sbjct: 478 HGHGE 482
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 27/194 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ A +FD K W +I +H H +++ L+ +M + G T +VL+
Sbjct: 449 VNRADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLS 508
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKA 166
AC T +GL+++ +R F +M + + + MV G +K
Sbjct: 509 AC--------------THMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKE 554
Query: 167 AKEFYDRMT-EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--EP-DASCWAAMTVCYVQ 222
A + M E N V W ++++ V A+ +E+S +P +A +A ++ Y +
Sbjct: 555 AVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAELAANELSNLQPSNAGNYAVLSNIYAE 614
Query: 223 NG----YAKAAIEM 232
G AKA ++M
Sbjct: 615 AGKWSDMAKARVQM 628
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 225/410 (54%), Gaps = 38/410 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM-- 174
P + +I GY+K G +++A+RLFDSM R SW++M+A YA+ G + A +D+M
Sbjct: 240 PIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLR 299
Query: 175 --TEKNSVT----------------------WV------------AMIAGYGKCGEVREA 198
N++T W+ A++ Y KC + EA
Sbjct: 300 EGASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQNVIVHTALMEMYVKCRAIDEA 359
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+ FD + D W+ M Y QNG ++E+++ M+ N + +EV +VG +SAC QL
Sbjct: 360 RHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQL 419
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G E+ + +++ T+Y+ +ALI M++KCG++ A F+R++ K V++++SMI
Sbjct: 420 GSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMI 479
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
A +G +++A+ ++ KM +GI+PN+VTF+ +LTAC+H GLV+ G FE M + +
Sbjct: 480 RGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHV 539
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P EH C+VDLL +SG+L +A+ I D + +A W LL AC+ H + EL ++AA
Sbjct: 540 SPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAG 599
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+ L P + LL+NIYA G W D ++ ++ +K SWI
Sbjct: 600 KLVALEPNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWI 649
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 182/391 (46%), Gaps = 28/391 (7%)
Query: 24 LKTLTKPHDQYHYYAQFLIRLLQLPGDNLSY---ARQVFDQIPKCKTQF--LWTSLIRNH 78
L + T+PH R L N S AR +FD +P+ + S +
Sbjct: 93 LPSPTEPHLPADLARLLKTRPLHALLSNASTYRAARHLFDVVPRPTAALCCAFLSGLSKL 152
Query: 79 VLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICGYTKIGLMDDA 136
LH F I + + +HR G VL +CA+ + + C G++ D
Sbjct: 153 SLHQEF---IEVVSSLHRRGGAIPSGCIPLVLKSCAQSAASCQGSQTHCHALVRGMLGD- 208
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
V +A+V YA G+M +A + M K+ + +I GY K G+V
Sbjct: 209 -----------VFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCLITGYSKSGDVE 257
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
EA+++FD + ++ W +M CY G + A+ ++ M +E + + + S C
Sbjct: 258 EARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNAITITTVFSICA 317
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNY-VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
+ GD++ + E D N V AL+ M+ KC +D A EF R+ +DV+++S
Sbjct: 318 KTGDLDTGRRARAWIREE--DLQNVIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWS 375
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI ++ +G+ E+L++F +M+ +PN+VT +GVL+AC+ G E G + +
Sbjct: 376 TMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIES- 434
Query: 376 FGIKPLTEHL-TCMVDLLGRSGQLEKAHSLI 405
PLT +L + ++D+ + G + +A S+
Sbjct: 435 -QTLPLTSYLGSALIDMYTKCGHVARARSVF 464
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ AR VF+++ + K W S+IR L+ +I LY KM G+ + TF ++L
Sbjct: 456 HVARARSVFNRMEQ-KVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALL 514
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMK 165
AC T GL+D F+ M ++ +S + +V G +
Sbjct: 515 TAC--------------THAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKSGRLW 560
Query: 166 AAKEFY-DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--EP-DASCWAAMTVCYV 221
A +F D E N+V W +++ +V AK ++ EP ++S + ++ Y
Sbjct: 561 EAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSNIYA 620
Query: 222 QNGYAKAAIEMYKVMRQENVR 242
G E+ +MR +N++
Sbjct: 621 DAGLWGDVREIRDLMRSKNLQ 641
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 264/487 (54%), Gaps = 32/487 (6%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--DNLSYARQVFDQIP 63
++ + K+ +L+Q+H+ ++KT H + LI L G L YA VF +I
Sbjct: 12 VLDKCKSLCELRQIHAQMIKTNLLNH---QFTVSRLIAFCSLSGVSGGLDYASSVFSRI- 67
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS--SVLNACARVPSLLE 121
+ F++ +LI+ ++ +S++LYA+M +SG FS SVL AC ++ + E
Sbjct: 68 QHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDE 127
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
G G + FD ++MV Y + G ++ A+ +DRM ++ V+
Sbjct: 128 ----GRQVHGQVLKTHLWFDPFV------GNSMVRMYIDFGEIELARRVFDRMPNRDVVS 177
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +MIAGY K GE+ A ++FDE+ E D AM +GY K + + +
Sbjct: 178 WNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMI-----DGYGKEMLSL-------GL 225
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD-RTNYVSNALIHMHSKCGYLDLAW 300
R A+V +SA LG VE L +V + + ++ +ALI M+SKCGY++ A+
Sbjct: 226 RPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAY 285
Query: 301 REFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F I ++ ++ ++SMI+ A HG ++EALD+F++M IEPN++TF+G+L+ CSHG
Sbjct: 286 HVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHG 345
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLVE+G FE M + I P +H CM+DL GR+G+LE A +I + D W A
Sbjct: 346 GLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKA 405
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
+L A H + E+G+ AA +EL P+ + + LL+NIYA G+W D +++M+ +
Sbjct: 406 ILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGV 465
Query: 480 KKSPGCS 486
KK GCS
Sbjct: 466 KKIAGCS 472
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 238/448 (53%), Gaps = 24/448 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A VF I T LW +IR H +SI + +M T+S +L AC
Sbjct: 79 AHYVFKDIQSPST-ILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAACT 137
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC-----GNMKAAKE 169
SL E G ++ L + NV S +V YA + +A++
Sbjct: 138 SSLSLRE---------GQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARK 188
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D M+E+N V W +M+AGY + G + A+++F E+ E + W M Y +NG K A
Sbjct: 189 VFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQA 248
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV----SNA 285
+ ++ MR+ V + +V ++ A++AC +LGD++M + ++ + V +NA
Sbjct: 249 LNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNA 308
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI--- 342
LIHM++ CG +D A+ F + + +S++S+ITAFA G +Q L++F M+ G
Sbjct: 309 LIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEA 368
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
P+ +TFIGVL ACSH GLV++G + F+ M + +GIKP EH CMVDLL R+G L++A
Sbjct: 369 RPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQ 428
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL-ELGPEK-TGNSALLANIYAS 460
LI + WGALLG C+ + NAEL + ++ L+ E P+K G +LLA +YAS
Sbjct: 429 ELIATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYAS 488
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
KW+D V+ + KK G SW+
Sbjct: 489 AEKWQDVATVRQKMVAMGVKKPAGQSWV 516
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 218/404 (53%), Gaps = 39/404 (9%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC-GNMKAAKEFYDRM----TE 176
+++ Y K GL+DDA RLFD M ERNV++W+ +VA AN G + A F M
Sbjct: 120 SLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVA 179
Query: 177 KNSVTWVA--------------------------------MIAGYGKCGEVREAKKVFDE 204
N+ T+ + +I Y K G++ ++VFDE
Sbjct: 180 PNAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDE 239
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ D W ++ + Q+G AIE++ M+ ++ + + ACT + +E
Sbjct: 240 MVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAG 299
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ HV + +R + NAL+ M+ KCG L+ A F R+ +DVIS+S+MI+ A +
Sbjct: 300 RQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQN 357
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
GKS EAL +F M++EG+ PN++T +GVL ACSH GLVEDG F M ++FGI+P EH
Sbjct: 358 GKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREH 417
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
CMVDLLGR+G+L++A I D DA W LLGAC++H + L AAR +L+L
Sbjct: 418 HNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLE 477
Query: 445 PEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
P+ G LL+N YA + +W D+E + + KK PG SWI
Sbjct: 478 PDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWI 521
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 61/269 (22%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFR--QSILLYAKMHRLGVLTSGFTFSSV 109
L A ++FD++P+ + WT+++ + +A R +++ M R GV + +TFSSV
Sbjct: 131 LDDALRLFDRMPE-RNVVTWTTVVAA-LANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 110 LNACARVPSLLEA-------------------VICGYTKIGLMDDAQRLFDSMAERNVIS 150
L AC P +L A +I Y K+G +D +R+FD M R+++
Sbjct: 189 LGACG-TPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVV 247
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMT----------------------------------- 175
W++++AG+A G+ A E + RM
Sbjct: 248 WNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVL 307
Query: 176 --EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
E++ + A++ Y KCG + +A+ +F + + D W+ M QNG + A+ ++
Sbjct: 308 KYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVF 367
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVE 262
+M+ E V + + MVG + AC+ G VE
Sbjct: 368 DLMKSEGVAPNRITMVGVLFACSHAGLVE 396
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 40/266 (15%)
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVD--------EGCCDRTNYVSNALIHMHSKC 293
R V++ + C + G ++ +HV+ G +VSN+L+ M++K
Sbjct: 69 RADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFAD-HGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
G LD A R F R+ ++V+++++++ A A+ G+ +EAL + M +G+ PN TF V
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 353 LTACSHGGL---VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG---------------- 393
L AC G+ + + L + VF L + + DL G
Sbjct: 189 LGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVW 248
Query: 394 --------RSGQLEKAHSLIMDYKDF---CDAGTWGALLGACKVHVNAELGEIAARHLLE 442
+SG A L M KD + GT ++L AC V E G H+L+
Sbjct: 249 NSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK 308
Query: 443 LGPEKTGNSALLANIYASMGKWKDSE 468
+ ++ALL ++Y G +D+E
Sbjct: 309 YERDLILHNALL-DMYCKCGSLEDAE 333
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 265/537 (49%), Gaps = 67/537 (12%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
TF+ LKQ S L+ + H FL +L+ +L Y +FD++ FLW
Sbjct: 20 TFDHLKQTTSILITSGLAHH------TFFLSDILRSATKDLGYTLLLFDRLAT-PYIFLW 72
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS------------- 118
++IR + + ++ Y+++ GV+ TF +L A +++ +
Sbjct: 73 NTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQFYAHIVKF 132
Query: 119 -------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+ +++ + G +D ++RLF A+++V+SW+A++ G G A E +
Sbjct: 133 GLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECF 192
Query: 172 DRM----TEKNSVT------------------WV------------------AMIAGYGK 191
M E + VT WV A++ Y K
Sbjct: 193 VEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSK 252
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG +A KVF+E+ + W A+ YVQ K A+++++ M E + ++ + A
Sbjct: 253 CGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSA 312
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
++AC QLG ++ L ++VD + + AL+ M+SKCG +D A F ++ KDV
Sbjct: 313 LTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDV 372
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+++MI A G + +L++F +M ++PN VTF+GVL+AC+HGGLV++G + F L
Sbjct: 373 YPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRL 432
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M + ++P +H CMVDLLGR+G+LE+A I G WGAL C +H E
Sbjct: 433 MICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFE 492
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LGE HL++L P +G LLAN+Y+ KW+ + V+ ++ KSPGCSWI
Sbjct: 493 LGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWI 549
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 206/359 (57%), Gaps = 1/359 (0%)
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G +D A+ +FD M E++ +SW+ M+ GYA G + A E + RM +N V+W +++ Y
Sbjct: 281 GEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYC 340
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
K G++ A+ +FD++ + W M Q G + A ++ M + + +A+V
Sbjct: 341 KKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVS 400
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF-SRIKNK 309
++AC + G + + + +HV + R+ V NAL+ M KCG ++ A F + I K
Sbjct: 401 ILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEK 460
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
D++S++ +I FA HG ++AL++F +M+ +G P+ VT I VL+AC+H GLVE+G + F
Sbjct: 461 DLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFF 520
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M +GIKP EH CMVDLLGR G +++A +I + WG+LL AC++H N
Sbjct: 521 ANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKN 580
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E E+A L L P GN A+L+NIYA GKW D ++ + T +K+ G SWI
Sbjct: 581 VEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWI 639
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 208/366 (56%), Gaps = 1/366 (0%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
+ + G +D A+ +FD M E++ +SW+ M+ GYA G + A E + RM +N V+W
Sbjct: 202 MAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWS 261
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+++ Y K G++ A+ +FD++ + W M Q G + A ++ M + +
Sbjct: 262 TVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIEL 321
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+A+V ++AC + G + + + +HV + R+ V NAL+ M KCG ++ A F
Sbjct: 322 DVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIF 381
Query: 304 -SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
+ I KD++S++ +I FA HG ++AL++F +M+ +G P+ VT I VL+AC+H GLV
Sbjct: 382 DTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLV 441
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G + F M +GIKP EH CMVDLLGR G +++A +I + WG+LL
Sbjct: 442 EEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLS 501
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H N E E+A L L P GN A+L+NIYA GKW D ++ + T +K+
Sbjct: 502 ACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKT 561
Query: 483 PGCSWI 488
G SWI
Sbjct: 562 AGSSWI 567
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 244/443 (55%), Gaps = 17/443 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG--FTFSS 108
NL ++ +F+ F + +L++ H + +I + L + +TF+S
Sbjct: 73 NLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTS 132
Query: 109 VLNACARVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
VL ACA + +LE V C TK G E N+ +++V Y G
Sbjct: 133 VLKACAGLAQVLEGQKVHCFVTKYG------------CESNLFVRNSLVDLYFKVGCNCI 180
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A++ +D M ++ V+W +I+GY G V +A+ VFD + E + W+ M Y +N
Sbjct: 181 AQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKY 240
Query: 227 KAAIEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
AIE+++ M+ E + ++V +V +SAC LG +++ + + + + ++ NA
Sbjct: 241 ADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNA 300
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L M++KCG + A F + +DVIS+S +I A +G + EA + F +M +G+EPN
Sbjct: 301 LADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPN 360
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
++F+G+LTAC+H GLV+ G + F++M +V+GI P EH C+VDLL R+G+L++A SLI
Sbjct: 361 DISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLI 420
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+ WGALLG C+++ +AE GE +LEL +G+ LAN+YASMG+
Sbjct: 421 NSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLD 480
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D+ ++ + + + K+PGCSWI
Sbjct: 481 DAASCRLRMRDNKSMKTPGCSWI 503
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 258/466 (55%), Gaps = 24/466 (5%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL-PGDNLSYARQVFDQIPKCKTQFLWTS 73
Q KQ+H++ +T ++ Y + ++ L P + YA +F IP F + S
Sbjct: 3 QTKQIHAH---AITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPN-PNIFDYNS 58
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLM 133
+I ++ ++ F + ++ KM + + TF++++ AC + SL E V K+G
Sbjct: 59 IITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSL-EQVFTLSMKLGNS 117
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
D V S+++ ++ + A++ +D + +N V W ++++GY CG
Sbjct: 118 SD------------VYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCG 165
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-----VRISEVAM 248
V EA+ VFD++ + + ++AM YV+NG+ +++++ +++++ ++ + +
Sbjct: 166 LVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALL 225
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V ++ACT +G E + +V+E + + ALI + KCG++ A + F+++
Sbjct: 226 VSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPV 285
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
KDV ++S+MI A +G ++ AL++F KM G +PN+VTF+GVLTAC+H L + +
Sbjct: 286 KDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARL 345
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F +M+ + I P EH C+VD+L RSGQ++KA + I D WG+LL C +H
Sbjct: 346 FGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHG 405
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SEIVKMM 473
+ ELG+ ++L+E P+ +G LLAN+YA+MGKW+ SE+ K+M
Sbjct: 406 HYELGQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLM 451
>gi|359491277|ref|XP_003634255.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g22760-like [Vitis vinifera]
Length = 583
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/357 (36%), Positives = 208/357 (58%), Gaps = 3/357 (0%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
Y + G ++ A LF M ERN SW+AM+ GY G++++A+ F+D M ++NS +W+ MI
Sbjct: 197 YARSGDLEKASSLFQQMPERNFASWNAMINGYVEFGDLESARSFFDAMPQRNSASWMTMI 256
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI--S 244
+GY KCG+V A ++FD++ D + A+ CY QN K A++++ +M NV +
Sbjct: 257 SGYSKCGDVDSACELFDQVGGKDLLLFNAVIACYAQNSKLKEALKLFNMMLHPNVNVQPD 316
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
E+ + IS C+Q GD + ++ + + AL+ +++ CG +D A+ F
Sbjct: 317 EMTLASVISPCSQFGDFRFGPWIESYMRRLGVEMDGRLGTALLDLYAXCGSIDKAYELFH 376
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
++ KD+++Y++MI +GK+ +A+ +F +M + I PN + F G+LT +H GLVE+
Sbjct: 377 GLRKKDLVAYTAMILGCGMNGKAIDAIKLFDEMVDAQICPNLIMFTGLLTTYNHSGLVEE 436
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G F M + + + PL +H MVDL GR+G L++A LI AG WGALL AC
Sbjct: 437 GYHCFTTMKK-YNLVPLVDHYGIMVDLFGRAGWLQEALELIKSMPMQPHAGVWGALLFAC 495
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
++H NA+LGEIAA+H EL P+ TG +L NIY S + D ++ + E K
Sbjct: 496 RLHNNADLGEIAAQHFFELEPDTTGYCSLPCNIYVSGERLDDVRRLRKIRKEKTFSK 552
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/532 (28%), Positives = 263/532 (49%), Gaps = 94/532 (17%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D LSYA +F+ I + +W ++ R H L++ ++ LY M LG+L + ++F +
Sbjct: 13 DGLSYAISIFETIQE-PNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFL 71
Query: 110 LNACARVPSLLE------------------------------------------------ 121
L +CA+ +L+E
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131
Query: 122 ----AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
A+I GY G +++A++LFD ++ ++V+SW+AM++GY N K A E Y M +
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191
Query: 178 N-------------------SV-------TWV-------------AMIAGYGKCGEVREA 198
N S+ +W+ +I Y KCGEV A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+F +++ D W + + K A+ +++ M + ++V M+ + AC L
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
G +++ + ++++ TN S +LI M++KCG ++ A + F + + + S+++
Sbjct: 312 GAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNA 371
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI FA HGK+ A D+F KMR GI+P+ +TF+G+L+ACSH G+++ G F M++ +
Sbjct: 372 MIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDY 431
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
I P EH CM+DLLG G ++A +I D W +LL ACK+H N ELGE
Sbjct: 432 KITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESY 491
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A++L+++ PE G+ LL+NIYA+ G+W ++ ++++ KK+PGCS I
Sbjct: 492 AQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSI 543
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 247/468 (52%), Gaps = 30/468 (6%)
Query: 27 LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQ 86
++ P Y L + PG L+ AR +FD+IP + +L+ H
Sbjct: 41 VSTPRKTTATYNCLLAGYARAPG-RLADARHLFDRIPTPDV-VSYNTLLLCHFASGDADG 98
Query: 87 SILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAER 146
+ L+A M R + ++ G +K G +++A+ +F +M R
Sbjct: 99 ARRLFASMP------------------VRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVR 140
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEK-NSVTWVAMIAGYGKCGEVREAKKVFDEI 205
N +SW+AMV+G+A G+M A+E++ EK ++V W AM++GY G V +A K F+ +
Sbjct: 141 NSVSWNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAM 200
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVGAISACTQLGDVEMA 264
+ W A+ YV+N +A A+ +++ M R+ NV+ + + + C+ L A
Sbjct: 201 PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLS----A 256
Query: 265 AILAKHVDEGC----CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
K + + C R V +L+ M+ KCG L A F + +DV+++++MI+
Sbjct: 257 LGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISG 316
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
+A HG +EA+++F +M++EG+EPN +TF+ VLTAC H GL + G + FE M ++GI+P
Sbjct: 317 YAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEP 376
Query: 381 LTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHL 440
+H +CMVDLL R+G+LE+A I +G LL AC+V+ N E E+AA L
Sbjct: 377 RVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKL 436
Query: 441 LELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+E P+ G LANIYA +W D V+ + + K+PG SWI
Sbjct: 437 IEKDPQSAGAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWI 484
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 257/499 (51%), Gaps = 31/499 (6%)
Query: 8 PRSKTFNQLKQVHSYLL-KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
PRS LKQ+H L+ K +T + + L+ + + YAR+VFD I
Sbjct: 10 PRS-----LKQIHGNLVVKGITS---RLQPLRELLLACVASFNGGMDYARKVFDGISH-P 60
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS-------- 118
F+ ++R + A + +LY ++ + FTF +L ACA +P
Sbjct: 61 DLFMHNVMVRGYAHSAAPAAAFVLYRRIEAARLKPDSFTFCYLLRACAGLPGSCAGYQVH 120
Query: 119 -------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
+ A+I + K G + A L D ER+V++ SA++AG+A G +
Sbjct: 121 GAVVKLGYFKDAFVRNALINMHAKCGDLLVAGTLLDEAGERDVVARSAVIAGHAAKGELD 180
Query: 166 AAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
A++ +D K+ V W M+A Y K GE+ +A+ + D E D W + Y G
Sbjct: 181 IARQLFDECQHKDLVCWNVMVAAYAKYGEMEKARGLLDRAPEKDVVSWNTIITGYTAKGL 240
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
K A+E+ MR + E +V +S C LG + ++ EG + NA
Sbjct: 241 LKEALEVLDEMRCVGLMPDEATIVSLLSCCANLGSLGTGRMIHSLHLEGRPCISILPGNA 300
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ M++KCG + A FSR+K +DV +++S+I A HG++++++ F KM +EG+ PN
Sbjct: 301 LVSMYAKCGDVQAAMEVFSRMKERDVWTWNSIIGGLAFHGQAEQSVQFFNKMLDEGLCPN 360
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+++F+ VL ACSH GLVEDG + F LM + I+P H +C+VD+LGRSG L++A +++
Sbjct: 361 EISFLCVLGACSHAGLVEDGQRYFSLMINRYRIEPNARHYSCIVDMLGRSGLLDEAFAIV 420
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+ W LLGAC++H + LG++A LL++ + +G+ LL+ IYAS +W
Sbjct: 421 SSMRCEPAVVIWRTLLGACRIHGDVALGKLARERLLKMNEDASGDYVLLSGIYASCDEWF 480
Query: 466 DSEIVKMMISETEKKKSPG 484
E V+ + E +K G
Sbjct: 481 GVETVRGSMDERGIRKVAG 499
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 254/495 (51%), Gaps = 64/495 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +VF+ + K + WT++I H ++ L + KM G+ + TF S+L AC+
Sbjct: 360 ALEVFNLV-KGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACS 418
Query: 115 RVPSLLE----------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
R PS L+ A++ Y K G + DA+ +F+ ++++NV++W+
Sbjct: 419 R-PSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWN 477
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEK----NSVT------------------WV------- 183
AM+ Y A + + ++ +S T WV
Sbjct: 478 AMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRA 537
Query: 184 ----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A+++ + CG++ A +F+++ E D W + +VQ+G + A + +
Sbjct: 538 GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYF 597
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
K+M++ V+ ++ G ++AC + L + E D V LI M++KC
Sbjct: 598 KMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKC 657
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G +D A F + K+V S++SMIT +A HG+ +EAL++F +M+ EG++P+ +TF+G L
Sbjct: 658 GSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGAL 717
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
+AC+H GL+++G FE M + F I+P EH CMVDL GR+G L +A I + D
Sbjct: 718 SACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPD 776
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
+ WGALLGAC+VH++ EL E A+ LEL P G +L+NIYA+ G WK+ ++ +
Sbjct: 777 SRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKV 836
Query: 474 ISETEKKKSPGCSWI 488
+ + K PG SWI
Sbjct: 837 MLDRGVVKKPGQSWI 851
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 178/380 (46%), Gaps = 63/380 (16%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +VF+ +P+ + WTS+I H F+Q+ L+ M GV F S+L AC
Sbjct: 259 ALKVFNNLPR-RDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACN 317
Query: 115 RVPSLLE----------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
P LE A++ YTK G M+DA +F+ + RNV+SW+
Sbjct: 318 H-PEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWT 376
Query: 153 AMVAGYANCGNMKAAKEFYDRMTE----KNSVTWV------------------------- 183
AM+AG+A G M+ A F+++M E N VT++
Sbjct: 377 AMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKA 436
Query: 184 ----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A+++ Y KCG + +A+ VF+ IS+ + W AM YVQ+ A+ +
Sbjct: 437 GYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATF 496
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ + +E ++ ++ C +E+ + + + ++ NAL+ M C
Sbjct: 497 QALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNC 556
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L A F+ + +D++S++++I F HG++Q A D F M+ G++P+Q+TF G+L
Sbjct: 557 GDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLL 616
Query: 354 TACSHGGLVEDGCKQFELMT 373
AC+ + +G + L+T
Sbjct: 617 NACASPEALTEGRRLHALIT 636
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 187/397 (47%), Gaps = 53/397 (13%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KN 178
+I Y K G + A+++FD M +++V SW+ ++ GY + A +++M + +
Sbjct: 145 LISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPD 204
Query: 179 SVTWVAMI---------------------AGYG--------------KCGEVREAKKVFD 203
T+V M+ AG+ KCG V +A KVF+
Sbjct: 205 KYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFN 264
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
+ D W +M ++ K A +++VM +E V+ +VA V + AC +E
Sbjct: 265 NLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQ 324
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+ + E D YV AL+ M++KCG ++ A F+ +K ++V+S+++MI FA
Sbjct: 325 GKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQ 384
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
HG+ +EA F KM GIEPN+VTF+ +L ACS ++ G ++ R+ +T+
Sbjct: 385 HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG---RQIHDRIIKAGYITD 441
Query: 384 H--LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
T ++ + + G L A + + + + W A++ A H + + LL
Sbjct: 442 DRVRTALLSMYAKCGSLMDARN-VFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALL 500
Query: 442 ELG--PEKTGNSALLANIYAS-----MGKWKDSEIVK 471
+ G P+ + +++L N+ S +GKW S I++
Sbjct: 501 KEGIKPDSSTFTSIL-NVCKSPDALELGKWVQSLIIR 536
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 134/265 (50%), Gaps = 2/265 (0%)
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +I+ Y KCG AK++FDE+ + D W + YVQ+ + A +++ M Q+ V
Sbjct: 142 WNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGV 201
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ + V ++AC +V+ L + D +V ALI+MH KCG +D A +
Sbjct: 202 KPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALK 261
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F+ + +D+I+++SMIT A H + ++A ++F M EG++P++V F+ +L AC+H
Sbjct: 262 VFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEA 321
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+E G + M V G+ T ++ + + G +E A + K + +W A++
Sbjct: 322 LEQGKRVHARMKEV-GLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR-NVVSWTAMI 379
Query: 422 GACKVHVNAELGEIAARHLLELGPE 446
H E + ++E G E
Sbjct: 380 AGFAQHGRMEEAFLFFNKMIESGIE 404
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 34/250 (13%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
GD +S A +F+ +P+ + W ++I V H + + + M GV TF+
Sbjct: 557 GDLMS-AMNLFNDMPE-RDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTG 614
Query: 109 VLNACARVPSLLEA---------------VICG------YTKIGLMDDAQRLFDSMAERN 147
+LNACA +L E V+ G YTK G +DDA +F ++ ++N
Sbjct: 615 LLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKN 674
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKN-SVTWVAMIAGYGKC---GEVREAKKVFD 203
V SW++M+ GYA G K A E + +M ++ W+ + C G ++E F+
Sbjct: 675 VYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFE 734
Query: 204 EIS----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+ EP + M + + G A+E M+ V+ + AC
Sbjct: 735 SMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQ---VKPDSRLWGALLGACQVHL 791
Query: 260 DVEMAAILAK 269
DVE+A +A+
Sbjct: 792 DVELAEKVAQ 801
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 207/362 (57%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
Y K G +D A+ FD R+V + M+A Y + + A++ +D M ++ V+W MI
Sbjct: 2 YAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMI 61
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
GY GEV A+++FD + DA W++M Y ++ +K A+E+++ M ++ +
Sbjct: 62 HGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCI 121
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+V +SAC+ LG + + A + + V+ + + ALI M++KCG ++ A R F R+
Sbjct: 122 TLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM 181
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
KDV ++SSMI A+HG E+L +F KM +EG++PN VTF+GVL AC+H GLV +G
Sbjct: 182 PEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGK 241
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
K F M V GI+P EH CMVDLLGRSG +E+A LI D W ALLGAC++
Sbjct: 242 KYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRI 301
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H N E+ E A L L P G+ LL+NIYA W+ ++ I ++ PG S
Sbjct: 302 HKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRS 361
Query: 487 WI 488
I
Sbjct: 362 SI 363
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 34/240 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC- 113
AR++FD + F W+S+I + ++++ L+ +MH ++ T SV++AC
Sbjct: 73 AREIFDGTED-RDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACS 131
Query: 114 --------ARVPSLLE------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
A V +E A+I Y K G ++ AQR+FD M E++V +WS+
Sbjct: 132 DLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSS 191
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEIS--- 206
M+ G AN G + + +M + N VT+V ++ G V E KK F ++
Sbjct: 192 MIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVH 251
Query: 207 --EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
EP + M ++G+ + A ++ + M E I A++G AC +VE+A
Sbjct: 252 GIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLG---ACRIHKNVEIA 308
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 30/204 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ A++VFD++P+ Q W+S+I H +S+ L++KM G+ +G TF VL
Sbjct: 170 DIESAQRVFDRMPEKDVQ-TWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVL 228
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMK 165
AC T +GL+ + ++ F SM E + I + MV G+++
Sbjct: 229 IAC--------------THVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVE 274
Query: 166 AAKEFYDRMT-EKNSVTWVAMIAG--YGKCGEVREAK----KVFDEISEPDASCWAAMTV 218
A++ MT E +++ W A++ K E+ E +V D + + + ++
Sbjct: 275 EARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGD---GHYVLLSN 331
Query: 219 CYVQNGYAKAAIEMYKVMRQENVR 242
Y Q + EM K +R++N++
Sbjct: 332 IYAQANSWEGVAEMRKTIRRDNIQ 355
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/440 (33%), Positives = 241/440 (54%), Gaps = 16/440 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A++ FD + + W SLI + + +++ ++ M GV T +SV++ACA
Sbjct: 205 AQRAFDGMA-VRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACA 263
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
++ E GL A+ + +++ +A+V YA C + A+ +DRM
Sbjct: 264 SWSAIRE---------GLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+N V+ +M+ GY + V+ A+ +F + E + W A+ Y QNG + A+ ++
Sbjct: 315 PLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFL 374
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMA----AILAKHVD--EGCCDRTNYVSNALIH 288
++++E++ + ++AC L D+++ + KH + + +V N+LI
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLID 434
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG ++ F R+ +DV+S+++MI +A +G AL++F KM G +P+ VT
Sbjct: 435 MYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVT 494
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
IGVL+ACSH GLVE+G + F M G+ P+ +H TCMVDLLGR+G L++A+ LI
Sbjct: 495 MIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTM 554
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
D WG+LL ACKVH N ELG+ A L+E+ P +G LL+N+YA +G+WKD
Sbjct: 555 PMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVV 614
Query: 469 IVKMMISETEKKKSPGCSWI 488
V+ + + K PGCSWI
Sbjct: 615 RVRKQMRQRGVIKQPGCSWI 634
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 142/262 (54%), Gaps = 10/262 (3%)
Query: 106 FSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
F+ +L++C R S ++A +I R+ + + + +V Y CG +
Sbjct: 22 FAKLLDSCVRSKSGIDA-----RRI-----HARIIKTQFSSEIFIQNRLVDAYGKCGYFE 71
Query: 166 AAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
A++ +DRM ++N+ ++ A+++ K G++ EA VF + EPD W AM + Q+
Sbjct: 72 DARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDR 131
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
+ A+ + M E+ ++E + A+SAC L D+ M + + + Y+ +A
Sbjct: 132 FEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSA 191
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ M+SKCG + A R F + ++++S++S+IT + +G + +AL++F+ M + G+EP+
Sbjct: 192 LVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPD 251
Query: 346 QVTFIGVLTACSHGGLVEDGCK 367
++T V++AC+ + +G +
Sbjct: 252 EITLASVVSACASWSAIREGLQ 273
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 262/491 (53%), Gaps = 28/491 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
L+ K+ NQ+KQ H+ L+ T +T P A ++ + L +L+YA ++FDQIP
Sbjct: 185 LIDLCKSINQIKQTHANLITTAQITLP-----VIANKFLKNVALA--SLTYAHKLFDQIP 237
Query: 64 KCKTQFLWTSLIRNHVLHAH-FRQSILLYAKMHR-LGVLTSGFTFSSVLNACARVPSLLE 121
+ F++ ++I++H + H + SI ++ + R G + ++F AC + E
Sbjct: 238 Q-PDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVRE 296
Query: 122 A--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
V K+GL + NV +A++ + G ++ A+ +D +++
Sbjct: 297 GEQVFTHAVKVGL------------DGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDF 344
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+W MI Y G + AK++FDE+ E D W+ + YVQ G A++ + M Q
Sbjct: 345 YSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQS 404
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
V+ +E MV A++AC+ L ++ + ++ + + +LI M++KCG +D A
Sbjct: 405 EVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSA 464
Query: 300 WREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
F K + V +++MI FA HGK +EA+++F KM+ E + PN+VTFI +L ACSH
Sbjct: 465 SSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSH 524
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
G +V++G FELM +GI P EH CMVDLL RSG L+ + +I+ D WG
Sbjct: 525 GYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWG 584
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMIS-ET 477
ALL AC+++ + E G R + E+ P G + LL NIY++ G+W ++ +V+ +
Sbjct: 585 ALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMVREKNEINS 644
Query: 478 EKKKSPGCSWI 488
++KK PG S I
Sbjct: 645 DRKKIPGFSSI 655
>gi|2827553|emb|CAA16561.1| predicted protein [Arabidopsis thaliana]
gi|7269122|emb|CAB79231.1| predicted protein [Arabidopsis thaliana]
Length = 889
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 234/427 (54%), Gaps = 22/427 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ A++ FD I + K W SL+ ++ ++ ++ K+ ++ SS
Sbjct: 424 IELAKKAFDDIAE-KNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS--- 479
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
Y K G M +A LF +M ++ SW+ ++ GY NC MK A+ ++
Sbjct: 480 ---------------YAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYF 524
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D M +KN V+W+ MI+GY K G+V+ A+++F +S+ D + AM CY QNG K A++
Sbjct: 525 DAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALK 584
Query: 232 MYKVMRQEN--VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++ M + N ++ E+ + +SA +QLG+ + ++ E + +S +LI +
Sbjct: 585 LFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDL 644
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ K G A++ FS + KD +SYS+MI +G + EA +F M + I PN VTF
Sbjct: 645 YMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTF 704
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
G+L+A SH GLV++G K F M + ++P +H MVD+LGR+G+LE+A+ LI
Sbjct: 705 TGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP 763
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+AG WGALL A +H N E GEIA H ++L + TG + LA IY+S+G+W D+
Sbjct: 764 MQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDART 823
Query: 470 VKMMISE 476
V+ I E
Sbjct: 824 VRDSIKE 830
>gi|326496937|dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 221/403 (54%), Gaps = 22/403 (5%)
Query: 104 FTFSSVLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDS 142
+ S L++C R PSL L A + Y + + A+RLF
Sbjct: 73 LSLSFSLHSCTRSPSLPVASLLHSFAVRLGHARDVYVLSAAVSAYFRATDVASAERLFSY 132
Query: 143 MAE-RNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKV 201
+ +V++W+ MV G+AN G+++ A+ F+D M E+N V+W AM+ Y G + +A+K+
Sbjct: 133 TKDVADVVTWTTMVTGHANTGDLERARWFFDAMPERNVVSWNAMLGAYASAGMLSKARKL 192
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
FD + +A+ W++M V++ + A+ ++ M V +E A+V A+SAC+ L +
Sbjct: 193 FDIMPSRNAASWSSMVTGLVRSNRCEEALRVFSEMIGMGVVPNESALVSAVSACSLLRSL 252
Query: 262 EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
E + + + ++ A++ M+ KCG + A R F+ + K++ S++SMIT
Sbjct: 253 EHGVWVHAYAKRELQGMSLVLATAIVDMYGKCGGIHNAVRVFAAMPVKNIYSWNSMITGL 312
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
A +G+ +AL +F KM+ G+ PN +TFIG+L ACSH GLV++G F +M FGI+P+
Sbjct: 313 AMNGREMQALSLFWKMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNMMVNGFGIQPV 372
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
EH MVDLLGR+G + +A + G WGAL GACK+H ELGE A+ L+
Sbjct: 373 QEHYGLMVDLLGRAGHVREAVDFVNSMPVEPHPGLWGALAGACKIHGEVELGEEIAKKLI 432
Query: 442 ELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
EL P LL+NIY + +W D V+ ++ + + K G
Sbjct: 433 ELEPRHGSRYILLSNIYGASNRWDDMATVRRLLKDRKVPKGTG 475
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 114/253 (45%), Gaps = 36/253 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
LS AR++FD +P + W+S++ V +++ ++++M +GV+ + S ++
Sbjct: 186 LSKARKLFDIMPS-RNAASWSSMVTGLVRSNRCEEALRVFSEMIGMGVVPNESALVSAVS 244
Query: 112 ACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC+ + S L A++ Y K G + +A R+F +M +N+ S
Sbjct: 245 ACSLLRSLEHGVWVHAYAKRELQGMSLVLATAIVDMYGKCGGIHNAVRVFAAMPVKNIYS 304
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
W++M+ G A G A + +M N +T++ ++ G V E + +F+ +
Sbjct: 305 WNSMITGLAMNGREMQALSLFWKMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNMMV 364
Query: 207 -----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS-ACTQLGD 260
+P + M + G+ + A++ M E + GA++ AC G+
Sbjct: 365 NGFGIQPVQEHYGLMVDLLGRAGHVREAVDFVNSMPVE----PHPGLWGALAGACKIHGE 420
Query: 261 VEMAAILAKHVDE 273
VE+ +AK + E
Sbjct: 421 VELGEEIAKKLIE 433
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 246/463 (53%), Gaps = 57/463 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ AR VF+++ K +W ++I +V + L+ +M V FTF+SVL
Sbjct: 249 DVNAARSVFEEV-DGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVL 307
Query: 111 NACARV-----------------PSLLE--------AVICGYTKIGLMDDAQRLFDSMAE 145
+ACA P+ + A++ Y+K G + A+R+FD+M
Sbjct: 308 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 367
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
++V+SW+ +++GY + G + A E + M KN ++W+ M++GY
Sbjct: 368 KDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGY---------------- 411
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
V G ++ A++++ MR E+V+ + GAI+AC +LG ++
Sbjct: 412 ---------------VHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGR 456
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
L H+ + + +N NAL+ M++KCG ++ A F + N D +S+++MI+A HG
Sbjct: 457 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG 516
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+EAL++F +M EGI+P++++F+ +LTAC+H GLV++G FE M R FGI P +H
Sbjct: 517 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 576
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
++DLLGRSG++ +A LI W A+L C+ + + E G AA L + P
Sbjct: 577 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 636
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ G LL+N Y++ G+W D+ V+ ++ + KK PGCSWI
Sbjct: 637 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWI 679
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 171/370 (46%), Gaps = 38/370 (10%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG------FT 105
L A FD +P + +++ N ++ A R S+ A +L SG ++
Sbjct: 110 LRDAAAFFDAVPPARRD----TVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYS 165
Query: 106 FSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
F+++++A ++ +L A C ++ S++ +A++A Y C +
Sbjct: 166 FTALISAVGQMHNL-AAPHCTQLHCSVLKSGAAAVLSVS-------NALIALYMKCDTPE 217
Query: 166 A---AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
A A++ D M +K+ +TW M+ GY + G+V A+ VF+E+ W AM YVQ
Sbjct: 218 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 277
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV--------EMAAILAKHVDEG 274
+G A E+++ M E V + E +SAC G ++ + V E
Sbjct: 278 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 337
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
V+NAL+ ++SK G + +A R F + KDV+S++++++ + D G +A+++F
Sbjct: 338 ALP----VNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVF 393
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
M + N ++++ +++ HGGL ED K F M R +KP + G
Sbjct: 394 KVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQM-RAEDVKPCDYTYAGAIAACGE 448
Query: 395 SGQLEKAHSL 404
G L+ L
Sbjct: 449 LGALKHGRQL 458
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/306 (18%), Positives = 115/306 (37%), Gaps = 43/306 (14%)
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP--DASCWAA 215
Y ++ + + V +++A + G +R+A FD + D A
Sbjct: 73 YTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNA 132
Query: 216 MTVCYVQNGYAKAAIEMY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH--VD 272
M + + A A+ ++ ++ ++R + + ISA Q+ ++ H V
Sbjct: 133 MMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVL 192
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWRE------------------------------ 302
+ VSNALI ++ KC + +W
Sbjct: 193 KSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNA 252
Query: 303 ----FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
F + K + +++MI+ + G +A ++F +M +E + ++ TF VL+AC++
Sbjct: 253 ARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACAN 312
Query: 359 GGLVEDGCKQFELMTRV---FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
G G + R+ F + +V L + G++ A I D + D
Sbjct: 313 AGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKR-IFDTMNLKDVV 371
Query: 416 TWGALL 421
+W +L
Sbjct: 372 SWNTIL 377
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 185/584 (31%), Positives = 281/584 (48%), Gaps = 115/584 (19%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--DNLSYARQVFDQIPK-- 64
RS++ + VH+ +L T Q+ RL+ + G D L AR++FD++P+
Sbjct: 27 RSRSARGTRLVHARILMT------QFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRN 80
Query: 65 -----------CKTQFL-----------------WTSLIRNHVLHAHFRQSILLYAKMHR 96
K+ FL W S++ H F +S+ + KMHR
Sbjct: 81 TFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHR 140
Query: 97 LGVLTSGFTFSSVLNACA---------RVPSLL------------EAVICGYTKIGLMDD 135
L + ++F S L+ACA +V +L+ A+I Y+K G +
Sbjct: 141 EDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVAC 200
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG--- 188
A+ +F M ERN+++W++++ Y G A E + RM E + VT ++++
Sbjct: 201 AEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACAS 260
Query: 189 ---------------------------------YGKCGEVREAKKVFDEISEPDASCWAA 215
Y KC +V EA++VFD +S + +
Sbjct: 261 LCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETS 320
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA----------A 265
M Y + KAA M+ M Q NV V+ I+ TQ G+ E A +
Sbjct: 321 MVSGYARAASVKAARFMFSKMTQRNV----VSWNALIAGYTQNGENEEALRLFRLLKRES 376
Query: 266 ILAKHVDEGCCDRTN-YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
I H G +++ +V N+LI M+ KCG ++ R F ++K +D +S++++I +A +
Sbjct: 377 IWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQN 436
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
G EAL +F KM G +P+ VT IGVL ACSH GLVE+G F M G+ PL +H
Sbjct: 437 GYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDH 495
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
TCMVDLLGR+G L +A +LI DA WG+LL ACKVH N E+G+ AA LLE+
Sbjct: 496 YTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEID 555
Query: 445 PEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
P +G LL+N+YA +G+W D V+ ++ + K PGCSWI
Sbjct: 556 PWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWI 599
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 251/444 (56%), Gaps = 26/444 (5%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ +R+VFD +P+ + W ++I ++ + + ++LL+ KM S+
Sbjct: 144 NVVDSRKVFDYMPE-RNAVTWNAMICGYLGNGDSKSAVLLFEKM-------------SIR 189
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKAAK 168
A + +I G+ + G + A+R FD + RNV++W+ MV GYA M+AA+
Sbjct: 190 TAVTWI-----EMIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAR 244
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
E ++ M ++N W +MI+GY K G V+EA+ +FD I + W ++ Y QNG+++
Sbjct: 245 EVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEE 304
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+E + M+ E EV + +SAC+QLG ++ + ++ +V N L+
Sbjct: 305 ALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVD 364
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M++KCG L A F + +++ ++SMI+ FA HG+S+EAL+ F +M + P+++T
Sbjct: 365 MYAKCGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEIT 424
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+ VL+AC+HGG V G + F M + +G+ +H C++DLLGR+G++++A+ LI
Sbjct: 425 FLSVLSACAHGGFVNAGLEIFSRMEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRM 483
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS----ALLANIYASMGKW 464
+ WGALLGAC+VH++ E+ + ++++ + LL+NIYA+ +W
Sbjct: 484 PVKPNDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRW 543
Query: 465 KDSEIVKMMISETEKKKSPGCSWI 488
+ +E ++M ++ +K+ GCS I
Sbjct: 544 EKAEKMRMEMANKGFQKTSGCSSI 567
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 244/489 (49%), Gaps = 55/489 (11%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL------ 100
LP D +S + I KC T + + +H H ++ L + G++
Sbjct: 2 LPNDVISSVEKYSFLISKCITA---RRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKC 58
Query: 101 ----TSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
++ TF + N R + L I Y+K G D+A LFD M +RNV+S++++++
Sbjct: 59 GCEESAHKTFGDLPNKTTRSWNTL---ISFYSKTGFFDEAHNLFDKMPQRNVVSYNSLIS 115
Query: 157 G------------------------------YANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
G Y CG + + M E+N V+W +M+
Sbjct: 116 GNLQWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWTSMV 175
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
Y + + EA +VF ++ + W A+ +V+NG A +++K M +E VR S
Sbjct: 176 VAYTRACRLDEACRVFKDMPVKNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAP 235
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN-----YVSNALIHMHSKCGYLDLAWR 301
V I AC Q + + + G D++ YV NALI M++KCG + A
Sbjct: 236 TFVSVIDACAQEALIGRGKQVHGQIIRG--DKSGNLFNVYVCNALIDMYAKCGDMKSAEN 293
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F +DV++++++IT FA +G +E+L +F +M +EPN VTF+GVL+ C+H GL
Sbjct: 294 LFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGL 353
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA--GTWGA 419
+G + +LM R +G+KP EH ++DLLGR +L +A SLI D WGA
Sbjct: 354 DNEGLQLVDLMERQYGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGA 413
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
+LGAC+VH N +L AA L EL PE TG +LANIYA+ GKW ++ ++ ++ E
Sbjct: 414 VLGACRVHGNLDLARKAAEKLFELEPENTGRYVMLANIYAASGKWGGAKRIRNVMKERCL 473
Query: 480 KKSPGCSWI 488
+K P CS I
Sbjct: 474 EKEPACSRI 482
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 240/480 (50%), Gaps = 62/480 (12%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV-------------- 116
W + +R F Q++ LY +M R G + FTF L +CA +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 117 -------PSLLEAVICGYTKIGLMDDAQRLFDS--MAERNVISWSAMVAGYANCGNMKAA 167
P + +I Y K L+D+A+++F+ + + + ++A+V+GY + A
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 168 KEFYDRMTEK----NSVTWVAMIAG----------------------------------- 188
+ +M E+ NSVT + +I
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y KCG V A+K+FDE+ W AM Y QNG A +E+Y+ M V V +
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
VG +S+C LG + + + +++NALI+M+++CG L A F +
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 316
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+ ++S++++I + HG + A+ +F +M GIEP+ F+ VL+ACSH GL + G +
Sbjct: 317 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 376
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F++M R + ++P EH +CMVDLLGR+G+L++A +LI D WGALLGACK+H
Sbjct: 377 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 436
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N EL E+A ++EL PE G LL+NIY++ K +++M+ E + KK PGCS++
Sbjct: 437 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 496
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 113/272 (41%), Gaps = 61/272 (22%)
Query: 49 GDNLSYARQVFDQ-IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS 107
G + AR+VF++ K + +L+ +V ++ +++LL+ +M+ GV + T
Sbjct: 97 GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLL 156
Query: 108 SVLNACARV---------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAER 146
++ AC S++ I Y K G ++ AQ+LFD M +
Sbjct: 157 GLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVK 216
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV------------------- 183
+ISW+AMV+GYA G E Y M + VT V
Sbjct: 217 GLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVE 276
Query: 184 ----------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
A+I Y +CG + +A+ VFD + E W A+ Y +G+ +
Sbjct: 277 FKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGE 336
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
A++++K M + + A V +SAC+ G
Sbjct: 337 IAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 368
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 242/442 (54%), Gaps = 19/442 (4%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ AR+VFD+ P + W LI + ++I +Y M GV T ++
Sbjct: 206 DMENARKVFDESP-VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE---RNVISW-SAMVAGYANCGNMKA 166
++C + +G ++ + ++ + E R I +A++ ++ CG++
Sbjct: 265 SSC--------------SMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A+ +D + ++ V+W MI+GY +CG + ++K+FD++ E D W AM VQ
Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A+ +++ M+ N + E+ M+ +SAC+QLG +++ + +++++ + +L
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSL 430
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M++KCG + A F I+ ++ ++Y+++I A HG + A+ F +M + GI P++
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDE 490
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TFIG+L+AC HGG+++ G F M F + P +H + MVDLLGR+G LE+A L+
Sbjct: 491 ITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLME 550
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
DA WGALL C++H N ELGE AA+ LLEL P +G LL +Y W+D
Sbjct: 551 SMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWED 610
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
++ + M++E +K PGCS I
Sbjct: 611 AKRARRMMNERGVEKIPGCSSI 632
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 181/415 (43%), Gaps = 82/415 (19%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG---FTFSS 108
L Y+ ++ I F W IR + ++S LLY +M R G S FT+
Sbjct: 103 LDYSVKILKGIENPNI-FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPV 161
Query: 109 VLNACA--RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
+ CA R+ SL ++ K+ L E +A + +A+CG+M+
Sbjct: 162 LFKVCADLRLSSLGHMILGHVLKLRL------------ELVSHVHNASIHMFASCGDMEN 209
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A++ +D ++ V+W +I GY K GE A
Sbjct: 210 ARKVFDESPVRDLVSWNCLINGYKKIGE-------------------------------A 238
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ AI +YK+M E V+ +V M+G +S+C+ LGD+ ++V E T + NAL
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG--------------------- 325
+ M SKCG + A R F ++ + ++S+++MI+ +A G
Sbjct: 299 MDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWN 358
Query: 326 ----------KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+ Q+AL +F +M+ +P+++T I L+ACS G ++ G + +
Sbjct: 359 AMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK- 417
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
+ + T +VD+ + G + +A S+ + ++ T+ A++G +H +A
Sbjct: 418 YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDA 471
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 247/474 (52%), Gaps = 23/474 (4%)
Query: 19 VHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNH 78
+H+ +LK + H Y + LI + G +L A++VFD++P+ + W SL+ +
Sbjct: 99 IHARVLKLGFESH---LYVSNALINMYGSCG-HLGLAQKVFDEMPE-RDLVSWNSLVCGY 153
Query: 79 VLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQR 138
FR+ + ++ M GV T V+ AC T +G A
Sbjct: 154 GQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLAC--------------TSLGEWGVADA 199
Query: 139 LFDSMAERNV----ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
+ D + E NV + ++ Y G + A+ +D+M +N V+W AMI GYGK G
Sbjct: 200 MVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGN 259
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+ A+++FD +S+ D W M Y Q G A+ ++K M + V+ E+ + +SA
Sbjct: 260 LVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSA 319
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C G +++ ++ + YV NALI M+ KCG ++ A F ++ KD +S+
Sbjct: 320 CAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSW 379
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+S+I+ A +G + ALD F +M E ++P+ F+G+L AC+H GLV+ G + FE M +
Sbjct: 380 TSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEK 439
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
V+G+KP +H C+VDLL RSG L++A I + D W LL A +VH N L E
Sbjct: 440 VYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAE 499
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
IA + LLEL P +GN L +N YA +W+D+ ++ ++ ++ +K G S I
Sbjct: 500 IATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCI 553
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 266/508 (52%), Gaps = 30/508 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ S + ++L+Q+H L + QF+ L +++ YA +F + +
Sbjct: 48 LIHASNSTHKLRQIHGQLYRC--NVFSSSRVVTQFISSCSSL--NSVDYAISIFQRF-EL 102
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--LLEAV 123
K +L+ +LIR ++ F SI + M + + TF VL + A + + + A+
Sbjct: 103 KNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRAL 162
Query: 124 ICGYTKIGLMDD-------------------AQRLFDSMAER----NVISWSAMVAGYAN 160
CG K GL D A ++FD E +V+ W+ ++ GY
Sbjct: 163 HCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCR 222
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
G++ A E +D M +K++ +W ++I G+ K G++ AK++F ++ E + W M +
Sbjct: 223 MGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGF 282
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
QNG + A+E + M +E R ++ +V A+SAC ++G ++ + ++
Sbjct: 283 SQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNL 342
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+ AL+ M++KCG ++ A + F K K ++ +S MI +A HG ++AL F M+
Sbjct: 343 VIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFT 402
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
G +P+ V F+ VL ACSH G V +G K F+ M R + I+P +H T +VD+LGR+G+L++
Sbjct: 403 GTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDE 462
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
A I D WGAL AC+ H N E+ E+A++ LL+L P+ G+ L+N YAS
Sbjct: 463 ALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYAS 522
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
+G+W D+E V++ + + K PG S+I
Sbjct: 523 VGRWDDAERVRVSMRDHGAHKDPGWSFI 550
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 257/490 (52%), Gaps = 26/490 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ SK+ + L Q+H+ LL+ +H F ++ +L ++ +F + P
Sbjct: 29 LIDNSKSTHHLLQIHAALLRRGL----HHHPILNFKLQRSYASLGHLHHSVTLFHRTPNP 84
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
FLWT +I H F ++ Y++M + + FT SS+L AC P+ AV
Sbjct: 85 NV-FLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPA--RAVHS 141
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
K GL + L+ S + +V YA G++ +A++ +D M E++ V++ AM
Sbjct: 142 HAIKFGL---SSHLYVS---------TGLVDAYARGGDVASAQKLFDAMPERSLVSYTAM 189
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK-------VMRQ 238
+ Y K G + EA+ +F+ + D CW M Y Q+G A+ ++
Sbjct: 190 LTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGN 249
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
VR +E+ +V +S+C Q+G +E + +V+ V AL+ M+ KCG L+
Sbjct: 250 GKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLED 309
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A + F ++ KDV++++SMI + HG S EAL +F +M G++P+ +TF+ VLTAC+H
Sbjct: 310 ARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAH 369
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GLV G + F+ M +G++P EH CMV+LLGR+G++++A+ L+ + D WG
Sbjct: 370 AGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWG 429
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
LL AC++H N LGE A L+ G +G LL+N+YA+ W V+ M+ +
Sbjct: 430 TLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSG 489
Query: 479 KKKSPGCSWI 488
+K PGCS I
Sbjct: 490 VEKEPGCSSI 499
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 238/432 (55%), Gaps = 24/432 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-----VLTSGFTFSSV 109
AR++FD++P+ + W L+ +V + + L+ +M + SGF S
Sbjct: 248 ARELFDRMPE-RNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGK 306
Query: 110 L----NACARVPS----LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
L + +++PS A++ GY K L+DDA++LFD + R+ + W+ M++GY C
Sbjct: 307 LQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQC 366
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
G + A + +M K+ ++W MIAG + G++R+A +F ++ + W ++ +V
Sbjct: 367 GMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFV 426
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
QNG A++ + +MR++ +SA L +++ RT +
Sbjct: 427 QNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQF-----HSLLVRTGF 481
Query: 282 VS-----NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+S NALI ++KCG + A + F + +D++S++++I +A +G E + +F +
Sbjct: 482 ISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFRE 541
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M + P+++T + VL+ACSH GL+++G F M +++ +KP+ EH TCMVDLLGR+G
Sbjct: 542 MEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAG 601
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
+L +A L+ + +AG WGALLGAC+VH N E+ +AA L EL P K N LL+N
Sbjct: 602 RLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSN 661
Query: 457 IYASMGKWKDSE 468
I GKW D++
Sbjct: 662 ICVEAGKWDDAD 673
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 161/340 (47%), Gaps = 33/340 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR++ D++P K + ++I + + F +I L +M +++ ++SVL
Sbjct: 120 LTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVS----WNSVLG 175
Query: 112 ACARVPSLLEAV-----------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
R + +V + GY + G +D A F + NVISW +
Sbjct: 176 GLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNL 235
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
V GY G M A+E +DRM E+N V W +++GY + +V A +F E+ E ++ W
Sbjct: 236 VNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWT 295
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
M +V++G + A ++ M +NV M G + + + D A+ + +G
Sbjct: 296 TMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKS-NLIDD-------ARQLFDG 347
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
R N +I + +CG LD A F ++ NKD+IS+++MI A G+ ++A +F
Sbjct: 348 IVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIF 407
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
KM+ N V++ +++ GL + + F LM R
Sbjct: 408 RKMKRR----NTVSWNSIISGFVQNGLFVEALQHFMLMRR 443
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
+ G + A+RLF+ M RNV+S++AMV+ A+ G + A+ +D M +N V+W M+
Sbjct: 22 ARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMV 81
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE------NV 241
+ G V +A+ +FD + + W M CYV+ G A E+ M E N
Sbjct: 82 ACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNT 141
Query: 242 RISEVAMVGAI-SACTQLGDVEMAAILAKHVDEGCCDRTNYVS----------------- 283
IS A G A L ++ I++ + G R +S
Sbjct: 142 MISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSW 201
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
N ++ + + G LD+A FSRI + +VIS+ +++ + G+ EA ++F +M E
Sbjct: 202 NLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMP----E 257
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
N V + +L+ VE F M I T MV RSG+L++A
Sbjct: 258 RNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSIS-----WTTMVSGFVRSGKLQEAKD 312
Query: 404 LI 405
++
Sbjct: 313 VL 314
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 175/410 (42%), Gaps = 79/410 (19%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR++F+++P+ + + +++ H ++ L+ +M R
Sbjct: 27 LAAARRLFEEMPR-RNVVSYNAMVSALAHHGRLAEARRLFDEMPR--------------- 70
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
R P ++ ++ G ++DA+ LFD+M RN SW+ MV+ Y G + A+E
Sbjct: 71 ---RNPVSWNTMMVACSQHGRVEDARGLFDAMPARNEYSWTIMVSCYVRAGELTLARELL 127
Query: 172 DRMT-EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
DRM EK + + MI+GY K G +A + E+ PD W ++ ++N ++
Sbjct: 128 DRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSV 187
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD-----------EGCC--- 276
+ + M +++ + + G + A GD+++A+ + G C
Sbjct: 188 QFFDEMPDKDLVSWNLMLEGYVRA----GDLDVASAFFSRIPSPNVISWVNLVNGYCQAG 243
Query: 277 -------------DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+R N L+ + + ++ A+ F + K+ IS+++M++ F
Sbjct: 244 RMGEARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVR 303
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG----GLVEDGCKQFELMTRVFGIK 379
GK QEA D+ KM ++ +G TA HG L++D + F+ GI
Sbjct: 304 SGKLQEAKDVLSKMPSDN--------VGAKTALMHGYLKSNLIDDARQLFD------GI- 348
Query: 380 PLTEHLTC---MVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGAC 424
+ C M+ + G L++A L M KD +W ++ C
Sbjct: 349 -VVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMI---SWNTMIAGC 394
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+ SN + ++ G L A R F + ++V+SY++M++A A HG+ EA +F +M
Sbjct: 12 FRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRR 71
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQL 398
N V++ ++ ACS G VED F+ M P T MV R+G+L
Sbjct: 72 ----NPVSWNTMMVACSQHGRVEDARGLFDAM-------PARNEYSWTIMVSCYVRAGEL 120
Query: 399 EKAHSLI 405
A L+
Sbjct: 121 TLARELL 127
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 254/479 (53%), Gaps = 22/479 (4%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+Q H+ ++ +P+ + A ++ + GD L A VFD+I + L+ S+IR
Sbjct: 97 QQAHAQIVLHGLQPNA---FLAAKMVAMYASSGD-LDSAVVVFDRIDN-PSSLLYNSIIR 151
Query: 77 NHVLHAHFRQS---ILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLM 133
+ H + YA+MH LG+L FT VL +CA + + +C +G
Sbjct: 152 AYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL-----SRVC----MGRC 202
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
Q L + E + ++++ Y CG + A++ +D+M ++ +W A+IAGY K G
Sbjct: 203 VHGQGLRVGL-EGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEG 261
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE--VAMVGA 251
E+ A+ +F+ + + W AM Y QNG+A+ A+ ++ M Q+ + V +V
Sbjct: 262 EIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSV 321
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI--KNK 309
+ AC Q +E + + + V AL M++KC L A F I K
Sbjct: 322 LPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGK 381
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
++I++++MITA+A HG EA+ +F M G++P+ VTF+G+L+ CSH GL++ G F
Sbjct: 382 NLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHF 441
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M + ++P EH C+VDLLGR+G+L +A LI WGALL AC+ H N
Sbjct: 442 NDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRN 501
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+ E+AAR L L P+ +GN LL+N+YA G W++ + ++ ++ KKSPGCSWI
Sbjct: 502 LEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWI 560
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 254/502 (50%), Gaps = 77/502 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL---- 110
AR+VFD +P+ + W ++I + +++ L+ M R + F F+SVL
Sbjct: 162 ARKVFDTMPE-RNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALT 220
Query: 111 -----------------NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
N + S+ A++ Y K G +DDA + F++ +++N I+WSA
Sbjct: 221 LPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSA 280
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVTWV-------------------------- 183
M+ GYA G+ A + + M + T+V
Sbjct: 281 MITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG 340
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
A++ Y KC + +A+K FD + EPD W +M YVQNG + A+ +Y
Sbjct: 341 FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYG 400
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M E + +E+ M + AC+ L +E I A+ V G + +AL M++KC
Sbjct: 401 RMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVP-IGSALSTMYAKC 459
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L F R+ +DVIS+++MI+ + +G +EAL++F +M+ EG +P+ VTF+ +L
Sbjct: 460 GCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNIL 519
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
+ACSH GLVE G F +M FG+ P EH CMVD+L R+G+L++A +F +
Sbjct: 520 SACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEA-------IEFTE 572
Query: 414 AGT-------WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ T W +LGAC+ + N ELG A L+ELG +++ LL++IY+++G+W+D
Sbjct: 573 SATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWED 632
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
E V+ M+ K PGCSWI
Sbjct: 633 VERVRRMMKLRGVSKEPGCSWI 654
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 154/348 (44%), Gaps = 63/348 (18%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK--EFYDRMTEKNSVTWVA 184
Y K + +A+ +F+ + ++V+SW+ ++ GY+ G ++ E + RM +N+
Sbjct: 50 YAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAH 109
Query: 185 MIAG---------------------------------------YGKCGEVREAKKVFDEI 205
AG Y K G EA+KVFD +
Sbjct: 110 TFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTM 169
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
E ++ WA M Y A A+ ++++MR+E +E +SA T
Sbjct: 170 PERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALT--------- 220
Query: 266 ILAKHVDEG----CCDRTN------YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
L + V+ G C N V NAL+ M++KCG LD A + F +K+ I++S
Sbjct: 221 -LPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWS 279
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MIT +A G S +AL +F M GI P++ TF+GV+ ACS G +G + + + ++
Sbjct: 280 AMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKL 339
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G + +T +VD+ + + A DY D W +++G
Sbjct: 340 -GFESQIYVMTALVDMYAKCSSIVDARKGF-DYLQEPDIVLWTSMIGG 385
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK--SQEALDMFLKMR 338
Y++N+L+++++KC L A F RI+NKDV+S++ +I ++ HG S +++F +MR
Sbjct: 41 YIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMR 100
Query: 339 NEGIEPNQVTFIGVLTACS 357
E PN TF GV TA S
Sbjct: 101 AENTAPNAHTFAGVFTAAS 119
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/494 (30%), Positives = 248/494 (50%), Gaps = 61/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL---- 110
AR++FD +PK W +I +V + ++ L+ +M + TFSS L
Sbjct: 302 ARRLFDMMPKTDL-VTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLS 360
Query: 111 -----------------NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
N + L A+I Y K ++ A+++FD +++ +A
Sbjct: 361 EGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTA 420
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG--------------------- 188
M++GY G A E + + ++ NSVT +++
Sbjct: 421 MISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG 480
Query: 189 --------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y KCG + A + F IS+ DA CW +M QNG + AI++++
Sbjct: 481 HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFR 540
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M + V++ A+SAC L + + + G + +ALI M+SKCG
Sbjct: 541 QMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCG 600
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
LDLA R F ++ K+ +S++S+I A+ +HG+ +++L++F M +GI+P+ VTF+ +++
Sbjct: 601 NLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 660
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC H G V++G F MT GI EH CMVDL GR+G+L +A +I DA
Sbjct: 661 ACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDA 720
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
G WG LLGAC++H N EL E+A+R+L +L P+ +G LL+N++A+ G+W+ ++ ++
Sbjct: 721 GVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLM 780
Query: 475 SETEKKKSPGCSWI 488
E +K PGCSWI
Sbjct: 781 KERGVQKVPGCSWI 794
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 199/445 (44%), Gaps = 87/445 (19%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD++P K LW ++ +V + + + ++ +M R + TF+ VL+ CA
Sbjct: 201 ARYLFDRMPS-KDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA 259
Query: 115 RVPSLLEAVICGYTKI-GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
E +I +++ GL+ + DS + ++A YA CG++ A+ +D
Sbjct: 260 S-----EIMINFGSQLHGLVVSSGLEMDSPVA------NTLLAMYAKCGHLFDARRLFDM 308
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAMTV----------- 218
M + + VTW MI+GY + G + EA +F E+ +PD+ +++
Sbjct: 309 MPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQG 368
Query: 219 ----CY-VQNGYA------KAAIEMY----------KVMRQ------------------- 238
CY ++NG + A I++Y K+ Q
Sbjct: 369 KEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLN 428
Query: 239 ---------------ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
E +R + V + + AC L + + L H+ + + YV
Sbjct: 429 GMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG 488
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
+A++ M++KCG LDLA + F I +KD + ++SMIT+ + +GK +EA+D+F +M G +
Sbjct: 489 SAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTK 548
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTR-VFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
+ V+ L+AC++ + G + M R F E + ++D+ + G L+ A
Sbjct: 549 YDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAE--SALIDMYSKCGNLDLA- 605
Query: 403 SLIMDYKDFCDAGTWGALLGACKVH 427
+ D + + +W +++ A H
Sbjct: 606 CRVFDTMEEKNEVSWNSIIAAYGNH 630
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 119/295 (40%), Gaps = 41/295 (13%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
W +IR + F ++L Y KM G L +TF V+ AC +
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGL-------------- 160
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
+S+A V+ G+ E + ++I Y
Sbjct: 161 ----------NSVALGRVVHDKIQFMGF-----------------ELDVFVGSSLIKFYS 193
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ G + +A+ +FD + D W M YV+NG A ++ MR+ + V
Sbjct: 194 ENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFAC 253
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+S C + + L V + + V+N L+ M++KCG+L A R F + D
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTD 313
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+++++ MI+ + +G EA +F +M + ++P+ +TF L S G + G
Sbjct: 314 LVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQG 368
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H ++LK H Y ++ + G L A Q F I K W S+I
Sbjct: 470 KELHGHILK---NGHGGSCYVGSAIMDMYAKCG-RLDLAHQTFIGISD-KDAVCWNSMIT 524
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL---------------- 120
+ + ++I L+ +M G + S+ L+ACA +P+L
Sbjct: 525 SCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRS 584
Query: 121 -----EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM- 174
A+I Y+K G +D A R+FD+M E+N +SW++++A Y N G +K + + M
Sbjct: 585 DLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGML 644
Query: 175 ---TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE-----PDASCWAAMTVCYVQNGYA 226
+ + VT++A+I+ G G+V E F ++E +A M + + G
Sbjct: 645 GDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRL 704
Query: 227 KAAIEMYKVMRQENVRISEVAMVGA-ISACTQLGDVEMAAILAKHV 271
A M M + + G + AC G+VE+A + ++++
Sbjct: 705 NEAFGMINSMPFS----PDAGVWGTLLGACRLHGNVELAEVASRNL 746
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 10/248 (4%)
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAMTVCYVQNGYAKAAIEMY 233
N + ++ Y CG +AK +F ++ SEP W M + G A+ Y
Sbjct: 80 NGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEP----WNWMIRGFTMMGQFDFALLFY 135
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M + I AC L V + ++ + + +V ++LI +S+
Sbjct: 136 FKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSEN 195
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A F R+ +KD + ++ M+ + +G A +F++MR PN VTF VL
Sbjct: 196 GCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVL 255
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
+ C+ ++ G Q + G++ + ++ + + G L A L D D
Sbjct: 256 SVCASEIMINFG-SQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLF-DMMPKTD 313
Query: 414 AGTWGALL 421
TW ++
Sbjct: 314 LVTWNGMI 321
>gi|115477124|ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42407750|dbj|BAD08896.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624127|dbj|BAF24072.1| Os08g0500600 [Oryza sativa Japonica Group]
Length = 429
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 231/424 (54%), Gaps = 40/424 (9%)
Query: 98 GVLTSGFTFSSVLNACARVPSLL--EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
G L + V +CA V ++ VI GY K G M+ A+R+FD M RN +SWS MV
Sbjct: 3 GALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMV 62
Query: 156 AGYANCGNMKAAKEFYDRMTE--KNSVTWVAMIAGYGKCGEVREAKKVFDE--------- 204
GYA G + A+E +DRM +N VTW +M+ G+ + G + A+K+FDE
Sbjct: 63 GGYAAAGELDVAREMFDRMPAIGRNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSW 122
Query: 205 ----------------------ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NV 241
+ E D W M Y Q G + +E+++ M+ E NV
Sbjct: 123 NAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNV 182
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEG--CCDRTNYVSNALIHMHSKCGYLDLA 299
+ +EV MV +SAC L +E + +D+ + + ALI M++KCG D+A
Sbjct: 183 QPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIA 242
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ F+ + K+V +++++IT A +G +++++D F +M+ G +PN +TF+GVLTACSHG
Sbjct: 243 VKIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHG 302
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV++G + F+ M G++P +H CMVD+LGR+G LE+A LI D +GA
Sbjct: 303 GLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGA 362
Query: 420 LLGACKVHVNAELGEIAAR--HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
LLGAC++H ++ E H L L +++G L+++IYA+ GKW D + ++ +
Sbjct: 363 LLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRS 422
Query: 478 EKKK 481
+K
Sbjct: 423 GIRK 426
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 217/368 (58%), Gaps = 1/368 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A+I +K G +++A+ LFD+M ERN SW++M+ Y G++ +A+ +D K+ V+
Sbjct: 81 AMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARLMFDCNPVKDVVS 140
Query: 182 WVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W A+I GY K ++ A+++F + S ++ W M YVQ G AI M++ M+ EN
Sbjct: 141 WNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSEN 200
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V+ +EV MV +SAC LG ++M + ++ + NALI M+ KCG L+ A
Sbjct: 201 VKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAI 260
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F + K++ ++S+I +G+ +EA+ F+ M EGI+P+ VTF+G+L+ CSH G
Sbjct: 261 DVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSG 320
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
L+ G + F M V+G++P EH CMVDLLGR+G L++A LI ++ G+L
Sbjct: 321 LLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSL 380
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L AC++H + +LGE + LLEL P GN L+N+YAS+ +W D + ++ +
Sbjct: 381 LRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVH 440
Query: 481 KSPGCSWI 488
K+PGCS I
Sbjct: 441 KTPGCSSI 448
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 259/496 (52%), Gaps = 62/496 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNL-SYARQVFDQIPK 64
L+ + KT + LKQVH++++ T +H Y L R+L + + ++A +F+ IP
Sbjct: 15 LLEKCKTLDTLKQVHAHMITTGL----IFHTYP--LSRILLISSTIVFTHALSIFNHIPN 68
Query: 65 CKTQFLWTSLIRNHV-LHAHFRQSILLYAKMHRLGVL-TSGFTFSSVLNACARVPSLLEA 122
T FL+ +LI + + H + LY+++ L +GFTF S+ AC P L
Sbjct: 69 -PTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHG 127
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
+A + E +
Sbjct: 128 ------------------------------------------RALHTHVLKFLEPTCDPF 145
Query: 183 V--AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA--------AIEM 232
V A++ Y KCG+V + +F++IS+PD + W ++ YV N A + +
Sbjct: 146 VQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTL 205
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M++ ++ +EV +V ISAC +LG + A +V + ++V ALI M+SK
Sbjct: 206 FIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSK 265
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG LDLA + F ++ ++D + Y++MI FA HG +ALD+F KM EG+ P+ VT +
Sbjct: 266 CGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVT 325
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
+ +CSH GLVE+GC FE M V+G++P EH C+VDLLGR+G+L +A +++
Sbjct: 326 MCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKP 385
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
+A W +LLGA +VH N E+GE+ +HL++L PE +GN LL+N+YAS+ +W D + V+
Sbjct: 386 NAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRK 445
Query: 473 MISETEKKKSPGCSWI 488
++ + K PG S +
Sbjct: 446 LMKDHGINKVPGSSLV 461
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 246/463 (53%), Gaps = 57/463 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ AR VF+++ K +W ++I +V + L+ +M V FTF+SVL
Sbjct: 247 DVNAARSVFEEV-DGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVL 305
Query: 111 NACARV-----------------PSLL--------EAVICGYTKIGLMDDAQRLFDSMAE 145
+ACA P+ + A++ Y+K G + A+R+FD+M
Sbjct: 306 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 365
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
++V+SW+ +++GY + G + A E + M KN ++W+ M++GY
Sbjct: 366 KDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGY---------------- 409
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
V G ++ A++++ MR E+V+ + GAI+AC +LG ++
Sbjct: 410 ---------------VHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGR 454
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
L H+ + + +N NAL+ M++KCG ++ A F + N D +S+++MI+A HG
Sbjct: 455 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG 514
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+EAL++F +M EGI+P++++F+ +LTAC+H GLV++G FE M R FGI P +H
Sbjct: 515 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 574
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
++DLLGRSG++ +A LI W A+L C+ + + E G AA L + P
Sbjct: 575 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 634
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ G LL+N Y++ G+W D+ V+ ++ + KK PGCSWI
Sbjct: 635 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWI 677
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 172/376 (45%), Gaps = 38/376 (10%)
Query: 46 QLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-- 103
Q L A FD +P + +++ N ++ A R S+ A +L SG
Sbjct: 102 QAAAGRLRDAAAFFDAVPPARRD----TVLHNAMMSAFARASLAAPAVSVFHALLGSGSL 157
Query: 104 ----FTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
++F+++++A ++ +L A C ++ S++ +A++A Y
Sbjct: 158 RPDDYSFTALISAVGQMHNL-AAPHCTQLHCSVLKSGAAAVLSVS-------NALIALYM 209
Query: 160 NCGNMKA---AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
C +A A++ D M +K+ +TW M+ GY + G+V A+ VF+E+ W AM
Sbjct: 210 KCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAM 269
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV--------EMAAILA 268
YVQ+G A E+++ M E V + E +SAC G ++ +
Sbjct: 270 ISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQP 329
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
V E V+NAL+ ++SK G + +A R F + KDV+S++++++ + D G
Sbjct: 330 NFVPEAALP----VNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLD 385
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
+A+++F M + N ++++ +++ HGGL ED K F M R +KP
Sbjct: 386 KAVEVFKVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQM-RAEDVKPCDYTYAGA 440
Query: 389 VDLLGRSGQLEKAHSL 404
+ G G L+ L
Sbjct: 441 IAACGELGALKHGRQL 456
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 224/411 (54%), Gaps = 46/411 (11%)
Query: 123 VICGYTKIGLMDDAQRLFDSMA-------------ERNVISWSAMVAGYANCGNMKAAKE 169
+I GY + G +++A+RLFD + RNV+SW++M+ Y G++ A+E
Sbjct: 239 LIAGYGQRGHVEEARRLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARE 298
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT------------ 217
+DRM E+++ +W +I+ Y + + EA K+F E+ PD W ++
Sbjct: 299 LFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMPSPDVLSWNSIISGLAQKGDLNLA 358
Query: 218 -------------------VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
Y +N K AI+++ M+ E R + + IS T L
Sbjct: 359 KDFFERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVSTGL 418
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK-NKDVISYSSM 317
D+ + L + V + + ++N+LI M+S+CG + A F+ IK KDVI++++M
Sbjct: 419 VDLYLGKQLHQLVTKTVLPDSP-INNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAM 477
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I +A HG + EAL++F M+ I P +TFI VL AC+H GLVE+G +QF+ M +G
Sbjct: 478 IGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEGWRQFKSMINDYG 537
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I+P EH +VD+LGR GQL++A LI D WGALLGAC+VH N EL +AA
Sbjct: 538 IEPRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLGACRVHNNVELALVAA 597
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+ L PE + LL N+YA++G+W D+E V++++ E KK G SW+
Sbjct: 598 DALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNVKKQAGYSWV 648
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 195/479 (40%), Gaps = 102/479 (21%)
Query: 28 TKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQS 87
+ P +Q + LIR +S AR +FD + + T W S+I +V ++
Sbjct: 35 SSPLNQSNKKLSNLIR-----SGRISEARTLFDSMKRRDT-VTWNSMISGYVQRREIARA 88
Query: 88 ILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERN 147
L+ +M R V++ S + C +++ +RLF+ M +R+
Sbjct: 89 RQLFDEMPRRDVVSWNLIVSGYFSCCGS---------------RFVEEGRRLFELMPQRD 133
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
+SW+ +++GYA G M A + ++ M E N+V++ A+I G+ G+V A F + E
Sbjct: 134 CVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFLLNGDVESAVGFFRTMPE 193
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYK-----------VMRQENVRISEVAMVGAISACT 256
D++ A+ V+NG A + + ++ N I+ G +
Sbjct: 194 HDSTSLCALISGLVRNGELDLAAGILRECGNGDDGKDDLVHAYNTLIAGYGQRGHVEEAR 253
Query: 257 QLGDVEMAA-------------------------------ILAKHVDEGCCDRTNYVSNA 285
+L DV + A+ + + +R N N
Sbjct: 254 RLFDVIPDDDDDGNEGKRRFRRNVVSWNSMMMCYVKAGDIVFARELFDRMVERDNCSWNT 313
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG-------------------- 325
LI + + ++ A + F + + DV+S++S+I+ A G
Sbjct: 314 LISCYVQISNMEEASKLFREMPSPDVLSWNSIISGLAQKGDLNLAKDFFERMPHKNLISW 373
Query: 326 --------KSQE---ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE--DGCKQFELM 372
K+++ A+ +F +M+ EG P++ T V++ + GLV+ G + +L+
Sbjct: 374 NTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVST--GLVDLYLGKQLHQLV 431
Query: 373 TR-VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
T+ V P+ L M R G + A ++ + K + D TW A++G H +A
Sbjct: 432 TKTVLPDSPINNSLITM---YSRCGAIVDACTVFNEIKLYKDVITWNAMIGGYASHGSA 487
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 115/258 (44%), Gaps = 35/258 (13%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
+I L GD L+ A+ F+++P K W ++I + + ++ +I L+++M G
Sbjct: 345 IISGLAQKGD-LNLAKDFFERMPH-KNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGER 402
Query: 101 TSGFTFSSVLNACARVPSLL--------------------EAVICGYTKIGLMDDAQRLF 140
T SSV++ + L ++I Y++ G + DA +F
Sbjct: 403 PDKHTLSSVISVSTGLVDLYLGKQLHQLVTKTVLPDSPINNSLITMYSRCGAIVDACTVF 462
Query: 141 DSMA-ERNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEV 195
+ + ++VI+W+AM+ GYA+ G+ A E + M +T+++++ G V
Sbjct: 463 NEIKLYKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLV 522
Query: 196 REAKKVF-----DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
E + F D EP +A++ + G + A+++ M + + A++G
Sbjct: 523 EEGWRQFKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLG 582
Query: 251 AISACTQLGDVEMAAILA 268
AC +VE+A + A
Sbjct: 583 ---ACRVHNNVELALVAA 597
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 42/184 (22%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
VF++I K W ++I + H +++ L+ M RL + + TF SVLNACA
Sbjct: 461 VFNEIKLYKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHA- 519
Query: 118 SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
GL+++ R F SM D E
Sbjct: 520 -------------GLVEEGWRQFKSMIN--------------------------DYGIEP 540
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMT-VCYVQNGYAKAAIEMYKV 235
+ +++ G+ G+++EA + + + +PD + W A+ C V N A + +
Sbjct: 541 RVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLGACRVHNNVELALVAADAL 600
Query: 236 MRQE 239
+R E
Sbjct: 601 IRLE 604
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 251/444 (56%), Gaps = 26/444 (5%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ +R+VFD +P+ + W ++I ++ + + ++LL+ KM S+
Sbjct: 15 NVVDSRKVFDYMPE-RNAVTWNAMICGYLGNGDSKSAVLLFEKM-------------SIR 60
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKAAK 168
A + +I G+ + G + A+R FD + RNV++W+ MV GYA M+AA+
Sbjct: 61 TAVTWIE-----MIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAR 115
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
E ++ M ++N W +MI+GY K G V+EA+ +FD I + W ++ Y QNG+++
Sbjct: 116 EVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEE 175
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+E + M+ E EV + +SAC+QLG ++ + ++ +V N L+
Sbjct: 176 ALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVD 235
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M++KCG L A F + +++ ++SMI+ FA HG+S+EAL+ F +M + P+++T
Sbjct: 236 MYAKCGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEIT 295
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+ VL+AC+HGG V G + F M + +G+ +H C++DLLGR+G++++A+ LI
Sbjct: 296 FLSVLSACAHGGFVNAGLEIFSRMEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRM 354
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS----ALLANIYASMGKW 464
+ WGALLGAC+VH++ E+ + ++++ + LL+NIYA+ +W
Sbjct: 355 PVKPNDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRW 414
Query: 465 KDSEIVKMMISETEKKKSPGCSWI 488
+ +E ++M ++ +K+ GCS I
Sbjct: 415 EKAEKMRMEMANKGFQKTSGCSSI 438
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 149/278 (53%), Gaps = 12/278 (4%)
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
+++V YA CGN+ +++ +D M E+N+VTW AMI GY G+ + A +F+++S A
Sbjct: 4 TSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAV 63
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQE--NVRISEVAMVGAISACTQLGDVEMAAILAK 269
W M + ++G + A + + E NV ++ MV + + EM A A+
Sbjct: 64 TWIEMIDGFARSGDTETARRFFDDVPSELRNV-VTWTVMVDGYAR-----NAEMEA--AR 115
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
V EG R + +++I + K G + A F RI +++++++S+I+ +A +G S+E
Sbjct: 116 EVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEE 175
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL+ F KM+ EG EP++VT VL+ACS GL++ G K +M GIK L +V
Sbjct: 176 ALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHK-GIKLNQFVLNGLV 234
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
D+ + G L A LI + + W +++ +H
Sbjct: 235 DMYAKCGDLANAR-LIFEGMAHRNRACWNSMISGFAIH 271
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 217/367 (59%), Gaps = 2/367 (0%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
+I G+ + MD A+ LF M +NV++W+AM++GY CG++ +A + +++ K+ V W
Sbjct: 75 MITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAW 134
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
AMI GY K G + A+++F+++ E + W AM Y++N A+ +++++ M ++
Sbjct: 135 TAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQ 194
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ + A+ C++L +++ + + V CD T +LI M+ KCG L+ W+
Sbjct: 195 PNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTT-AGTSLISMYCKCGVLEDGWK 253
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F ++ +DV+++++MI+ +A HG+ ++AL +F +M +G++P+ +TF+ VL AC+H G
Sbjct: 254 LFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGF 313
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ G K F M + +G+ +H TCMVDLLGR+G+L +A LI A +G LL
Sbjct: 314 TDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLL 373
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC++H N E+ E A++ LL L P LAN+YA+ +W V+ + + K
Sbjct: 374 GACRIHKNTEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVK 433
Query: 482 SPGCSWI 488
+PG SWI
Sbjct: 434 TPGYSWI 440
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 48/289 (16%)
Query: 174 MTEKNSVTWVAMIAGYGKC-GEVREAKKVFDEISEPDASCWAAMTVCYVQN--------- 223
MT K +VTW +++AG K G+++EA+++F +I EPDA + M CYV+N
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60
Query: 224 -----------------GYAK-----AAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
G+A+ A +++ +M +NV V IS + GD+
Sbjct: 61 FEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNV----VTWNAMISGYVECGDL 116
Query: 262 EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
+ A L E ++ A+I + K G + LA R F ++ K+++++++MI +
Sbjct: 117 DSALKLF----EKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGY 172
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
++ ++++ + +F M GI+PN T L CS ++ G + +L+ + PL
Sbjct: 173 IENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCK----SPL 228
Query: 382 TEHLTCMVDLLG---RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+ T L+ + G LE L + D TW A++ H
Sbjct: 229 CDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRR-DVVTWNAMISGYAQH 276
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ A ++F+++P+ K W ++I ++ + + L+ M G+ + T SS L
Sbjct: 147 IGLAERLFEKMPE-KNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALL 205
Query: 112 ACARVPSL-----LEAVICG----------------YTKIGLMDDAQRLFDSMAERNVIS 150
C+ + +L + ++C Y K G+++D +LF + R+V++
Sbjct: 206 GCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVT 265
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKN-SVTWVAMIAGYGKC 192
W+AM++GYA G K A +D M EK W+ +A C
Sbjct: 266 WNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMAC 308
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 221/410 (53%), Gaps = 38/410 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
P + +I GY+K G + A+RLFD M R SW++M+A YA+ G + A + RM
Sbjct: 151 PIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLS 210
Query: 177 --------------------------------------KNSVTWVAMIAGYGKCGEVREA 198
+N + A++ Y KC + EA
Sbjct: 211 EGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCQAIDEA 270
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
++ FD + + D W+ M Y QNG ++E+++ M+ + + +EV +VG +SAC QL
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQL 330
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G E+ + HV+ T+Y+ +ALI M++KCG++ A F+R+++K VI+++SM+
Sbjct: 331 GSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMM 390
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
A +G +Q+A+ ++ +M E ++PN++TF+ +LTAC+H GLV+ G F+ M + +
Sbjct: 391 RGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHV 450
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P EH C+VDLL +SG+L +A+ I D + +A W LL AC+ H + EL ++AA
Sbjct: 451 SPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAS 510
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL L P+ + LL+NIYA G W D ++ ++ +K SWI
Sbjct: 511 KLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWI 560
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 189/374 (50%), Gaps = 28/374 (7%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD +P+ T L +LI ++ + ++ +HR G V+ +CA
Sbjct: 38 ARHLFDAVPR-PTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCA 96
Query: 115 RVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ + + V C GL+ D + +A+V YA G+M A + +D
Sbjct: 97 ILAASRQGKQVHCHAIVRGLLGD------------IFVQTALVDFYAKNGDMDCAVKVFD 144
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
M K+ + +I GY K G+V +A+++FD + ++ W +M CY G + A+ +
Sbjct: 145 EMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRL 204
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIHMHS 291
++ M E R + + + S C + GD+E + E D N V AL+ M+
Sbjct: 205 FRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQ--DLQNMIVHTALMEMYV 262
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KC +D A REF R++ +DV+++S+MI +A +G+ E+L++F +M+ +PN+VT +G
Sbjct: 263 KCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVG 322
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIK-PLTEHL-TCMVDLLGRSGQLEKAHSLI--MD 407
VL+AC+ G E G ++ + V PLT +L + ++D+ + G + +A S+ M+
Sbjct: 323 VLSACAQLGSDELGG---QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRME 379
Query: 408 YKDFCDAGTWGALL 421
+K TW +++
Sbjct: 380 HKVVI---TWNSMM 390
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 24/197 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VF+++ K W S++R L+ + +I LY +M V + TF ++L AC
Sbjct: 371 ARSVFNRMEH-KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTAC- 428
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKE 169
T GL+D F M + +S + +V G ++ A +
Sbjct: 429 -------------THAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYK 475
Query: 170 FY-DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDE--ISEPD-ASCWAAMTVCYVQNGY 225
F D E N+V W +++ +V AK + + EPD +S + ++ Y G
Sbjct: 476 FICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGL 535
Query: 226 AKAAIEMYKVMRQENVR 242
E+ +MR +NV+
Sbjct: 536 WGDVREIRDLMRSKNVQ 552
>gi|357142899|ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 497
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 214/369 (57%), Gaps = 3/369 (0%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
++ A + Y + A+RLF ++ +V++W+ MVAG+A G+++ A+ F+D M E
Sbjct: 113 IVNAAVSAYFTAADVASAERLFSDTSKDVADVVTWTTMVAGHARAGDVERARWFFDAMPE 172
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
+N V+W AM+ Y G + EA+K+FD + +A+ W++M VQ+ + + A+ ++ M
Sbjct: 173 RNVVSWNAMLGAYASAGMLSEARKLFDGMHSRNAATWSSMVTGLVQSDHCEEALRVFSDM 232
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV-SNALIHMHSKCGY 295
V +E +V ISAC QL +E + +V + + + A++ M+ KCG
Sbjct: 233 VARGVVPNESILVSVISACAQLRSLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKCGC 292
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
+ A R F+ + +++ S++SMIT A +G+ +AL +F KM+ G++PN +TFIG+L A
Sbjct: 293 IHNAIRVFAAMPVRNIYSWNSMITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGA 352
Query: 356 CSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
CSH GLV++G F M FGI+P+ EH MVDLLGR+G +++A + + G
Sbjct: 353 CSHSGLVDEGRWLFNRMVNDFGIQPVPEHYGLMVDLLGRAGLVKEAVDFVKNMPVEPHPG 412
Query: 416 TWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMIS 475
WGAL GAC +H ELGE A+ L+EL P LL+NIY + +W+D V+ +I
Sbjct: 413 LWGALAGACNIHGEVELGEEIAKKLIELEPRHGSRYILLSNIYGTSSRWEDMATVRRLIK 472
Query: 476 ETEKKKSPG 484
E + K G
Sbjct: 473 ERKVSKGTG 481
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 115/254 (45%), Gaps = 37/254 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
LS AR++FD + + W+S++ V H +++ +++ M GV+ + SV++
Sbjct: 191 LSEARKLFDGM-HSRNAATWSSMVTGLVQSDHCEEALRVFSDMVARGVVPNESILVSVIS 249
Query: 112 ACARVPS----------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
ACA++ S L A++ Y K G + +A R+F +M RN+
Sbjct: 250 ACAQLRSLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKCGCIHNAIRVFAAMPVRNIY 309
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
SW++M+ G A G A + +M + N +T++ ++ G V E + +F+ +
Sbjct: 310 SWNSMITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGACSHSGLVDEGRWLFNRM 369
Query: 206 S-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS-ACTQLG 259
+P + M + G K A++ K M E + GA++ AC G
Sbjct: 370 VNDFGIQPVPEHYGLMVDLLGRAGLVKEAVDFVKNMPVE----PHPGLWGALAGACNIHG 425
Query: 260 DVEMAAILAKHVDE 273
+VE+ +AK + E
Sbjct: 426 EVELGEEIAKKLIE 439
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 221/410 (53%), Gaps = 38/410 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
P + +I GY+K G + A+RLFD M R SW++M+A YA+ G + A + RM
Sbjct: 151 PIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLS 210
Query: 177 --------------------------------------KNSVTWVAMIAGYGKCGEVREA 198
+N + A++ Y KC + EA
Sbjct: 211 EGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVHTALMEMYVKCRAIDEA 270
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
++ FD + + D W+ M Y QNG ++E+++ M+ + + +EV +VG +SAC QL
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQL 330
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G E+ + HV+ T+Y+ +ALI M++KCG++ A F+R+++K VI+++SM+
Sbjct: 331 GSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMM 390
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
A +G +Q+A+ ++ +M E ++PN++TF+ +LTAC+H GLV+ G F+ M + +
Sbjct: 391 RGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHV 450
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P EH C+VDLL +SG+L +A+ I D + +A W LL AC+ H + EL ++AA
Sbjct: 451 SPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAS 510
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL L P+ + LL+NIYA G W D ++ ++ +K SWI
Sbjct: 511 KLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWI 560
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 189/374 (50%), Gaps = 28/374 (7%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD +P+ T L +LI ++ + ++ +HR G V+ +CA
Sbjct: 38 ARHLFDAVPR-PTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCA 96
Query: 115 RVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ + + V C GL+ D + +A+V YA G+M A + +D
Sbjct: 97 ILAASRQGKQVHCHAIVRGLLGD------------IFVQTALVDFYAKNGDMDCAVKVFD 144
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
M K+ + +I GY K G+V +A+++FD + ++ W +M CY G + A+ +
Sbjct: 145 EMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRL 204
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIHMHS 291
++ M E R + + + S C + GD+E + E D N V AL+ M+
Sbjct: 205 FRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQ--DLQNMIVHTALMEMYV 262
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KC +D A REF R++ +DV+++S+MI +A +G+ E+L++F +M+ +PN+VT +G
Sbjct: 263 KCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVG 322
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIK-PLTEHL-TCMVDLLGRSGQLEKAHSLI--MD 407
VL+AC+ G E G ++ + V PLT +L + ++D+ + G + +A S+ M+
Sbjct: 323 VLSACAQLGSDELGG---QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRME 379
Query: 408 YKDFCDAGTWGALL 421
+K TW +++
Sbjct: 380 HKVVI---TWNSMM 390
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 24/197 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VF+++ K W S++R L+ + +I LY +M V + TF ++L AC
Sbjct: 371 ARSVFNRMEH-KVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTAC- 428
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKE 169
T GL+D F M + +S + +V G ++ A +
Sbjct: 429 -------------THAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYK 475
Query: 170 FY-DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDE--ISEPD-ASCWAAMTVCYVQNGY 225
F D E N+V W +++ +V AK + + EPD +S + ++ Y G
Sbjct: 476 FICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGL 535
Query: 226 AKAAIEMYKVMRQENVR 242
E+ +MR +NV+
Sbjct: 536 WGDVREIRDLMRSKNVQ 552
>gi|357118977|ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 604
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/444 (33%), Positives = 243/444 (54%), Gaps = 27/444 (6%)
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLN 111
S AR++ IP+ T W +L+R + + L+ +M HR V +++S+L+
Sbjct: 140 SSARRLIADIPRPDT-VTWNTLLRACLRSGLLPSARRLFDQMPHRDLV-----SYNSMLS 193
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG-NMKAAKEF 170
+ Y +G M A RLFD M ER+V++W+ M+AGYA G +M +A+
Sbjct: 194 S--------------YAAVGDMAGAGRLFDEMPERDVVTWNTMLAGYARGGADMASARAV 239
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D M E++ V+W +M+ GY + G+V A +FD + A+ W + Y + + +
Sbjct: 240 FDAMPERDVVSWNSMLDGYAQAGDVVMAWAMFDGMPRRSAASWNVVLALYARRKDWRECL 299
Query: 231 EMYKVMRQENVRI-SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR---TNYVSNAL 286
++ M V + +E V ++AC LGD+E + V E DR + AL
Sbjct: 300 RLFDAMMAVGVSVPNEKTFVSVLTACGSLGDLERGKWVHGLVRERW-DRLVPDVLLLTAL 358
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M++KCG ++ A F + + V S++SMI + HG+S++AL++FL+M G PN+
Sbjct: 359 LTMYAKCGAMETAREIFDSMSERSVPSWNSMIIGYGLHGQSEKALELFLEMEKSGPRPNE 418
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
TFI VL++C+HGGLV +G F+ M R +G +P EH CM+DLLGR+G L+ + +LI
Sbjct: 419 TTFICVLSSCAHGGLVLEGWWCFDRMVRFYGFEPKAEHFGCMMDLLGRAGLLKDSENLIQ 478
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ + WG ++ A + N +LGE + L+E+ P + G LL+NIYAS G+W D
Sbjct: 479 NLQGKASPALWGIMMSASQTQNNYKLGEFVGKKLIEMKPAEFGPYLLLSNIYASEGRWGD 538
Query: 467 SEIVKMMISETEKKKSPGCSWISS 490
E V+ ++ E +K G S I S
Sbjct: 539 VEKVREVMKENGAEKYVGLSLIGS 562
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 249/483 (51%), Gaps = 27/483 (5%)
Query: 15 QLKQVHSYLL-KTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTS 73
Q K+ H+ L+ LT P F L GD + YA + + T FL+ +
Sbjct: 3 QFKEAHTQLIINGLTHPPPSLRPIISF--SALDPSGD-IDYALLLLLRTSTPPTVFLFNT 59
Query: 74 LIRNHVL---HAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
IR S+LL+ +M L + + FTF+ + C+ +
Sbjct: 60 TIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAF----------- 108
Query: 131 GLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
D R F M E +V ++++ Y+ CG + A+ +D +E + V+W +M
Sbjct: 109 ----DLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSM 164
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I G + G + EA +F +++E + W M Y QNG K A+ +++ M+ + +
Sbjct: 165 IDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNS 224
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+V +SAC+QLG ++ + ++ + C + +S ALI M++KCG +DLA + FS
Sbjct: 225 AILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFST 284
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ +DV +Y++ I+ A +G S+EAL +F +M+ EGI P+ V++I VL ACSH G VE G
Sbjct: 285 SRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKG 344
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
F M+ V GI+P +H CMVDLLGR+G LE+A + D WGALLGAC+
Sbjct: 345 FHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACR 404
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
V+ NAE+G+ L+E G LL+NIYA K +D+E V+ + + + PGC
Sbjct: 405 VYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGC 464
Query: 486 SWI 488
S I
Sbjct: 465 SLI 467
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 240/480 (50%), Gaps = 62/480 (12%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV-------------- 116
W + +R F Q++ LY +M R G + FTF L +CA +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 117 -------PSLLEAVICGYTKIGLMDDAQRLFDS--MAERNVISWSAMVAGYANCGNMKAA 167
P + +I Y K L+D+A+++F+ + + + ++A+V+GY + A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 168 KEFYDRMTEK----NSVTWVAMIAG----------------------------------- 188
+ +M E+ NSVT + +I
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y KCG V A+K+FDE+ W AM Y QNG A +E+Y+ M V V +
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
VG +S+C LG + + + +++NALI+M+++CG L A F +
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 307
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+ ++S++++I + HG + A+ +F +M GIEP+ F+ VL+ACSH GL + G +
Sbjct: 308 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEY 367
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F++M R + ++P EH +CMVDLLGR+G+L++A +LI D WGALLGACK+H
Sbjct: 368 FKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHK 427
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N EL E+A ++EL PE G LL+NIY++ K +++M+ E + KK PGCS++
Sbjct: 428 NVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYV 487
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 61/272 (22%)
Query: 49 GDNLSYARQVFDQ-IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS 107
G + AR+VF++ K + +L+ +V ++ ++LL+ +M+ GV + T
Sbjct: 88 GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLL 147
Query: 108 SVLNACARV---------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAER 146
++ AC S++ I Y K G ++ AQ+LFD M +
Sbjct: 148 GLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVK 207
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV------------------- 183
+ISW+AMV+GYA G E Y M + VT V
Sbjct: 208 GLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVE 267
Query: 184 ----------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
A+I Y +CG + +A+ VFD + E W A+ Y +G+ +
Sbjct: 268 FKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGE 327
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
A++++K M + + A V +SAC+ G
Sbjct: 328 IAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 359
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 260/483 (53%), Gaps = 52/483 (10%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
+ + Q+KQVH+ + T HD A L+ + D L A +F+++ + +
Sbjct: 12 KCRNIFQIKQVHAQVTTT-GIIHDLI--VANKLLYMCAKHKD-LVTAHLLFNKMEE-RDP 66
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
W+ +I V + + + + ++ R G F+ V+ AC L+
Sbjct: 67 VSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLI-------- 118
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
+G + + L + + N + S +V YA CG + AK+ +DRM +K+ VT MIAG
Sbjct: 119 -MGRLIHSTVLKNGLHLDNFVC-STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAG 176
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y +CG+ E+ +FD+ MR++ +VAM
Sbjct: 177 YAECGKPNESWVLFDQ-------------------------------MRRDGFVPDKVAM 205
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNY---VSNALIHMHSKCGYLDLAWREFSR 305
V ++AC +LG + A ++ +V C R + + A+I M++KCG +D + F R
Sbjct: 206 VTIVNACAKLGAMNKARLVHDYV---CARRYSLDVELGTAMIDMYAKCGSIDSSREIFDR 262
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
++ K+VIS+S+MI A+ HG+ +EAL++F M N GI PN++TFI +L ACSH GLV+DG
Sbjct: 263 MEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDG 322
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F LM+ +G++P +H TCMVDLLGR+G+L++A LI + + D G W A LGAC+
Sbjct: 323 LQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACR 382
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H +L E AA+ LL L + G+ LL+NIYA+ G+WKD ++ ++++ KK PG
Sbjct: 383 IHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGY 442
Query: 486 SWI 488
+WI
Sbjct: 443 TWI 445
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 240/439 (54%), Gaps = 21/439 (4%)
Query: 55 ARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
AR++FD+ C + W S+I +V ++ LY KM L V+ T V++A
Sbjct: 209 ARKLFDE--SCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSAS 266
Query: 114 ARVPSLLEAVICGYTKIGLMDDAQRLFDSMAER----NVISWSAMVAGYANCGNMKAAKE 169
A+ LE + G ++L S+ E V +A++ Y C N++AAK
Sbjct: 267 AQ----LENLALG----------RKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKI 312
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++ MT+K V+W M+ GY K G + A ++F+E+ E D W A+ +VQ +K A
Sbjct: 313 LFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEA 372
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ ++ M+ +V ++ +V +SAC+QLG +++ + +VD+ + AL+ M
Sbjct: 373 LALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDM 432
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG + A + F + ++ ++++++I A HG+ A+ F +M + G+ P+++TF
Sbjct: 433 YAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITF 492
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
IGVL+AC HGGLV+ G F MT +GI P +H +C+VDLLGR+G LE+A LI
Sbjct: 493 IGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMP 552
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
DA WGAL ++H N +GE AA LLEL P G LLAN+Y W+ +
Sbjct: 553 FEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARK 612
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ M+ E +K+PGCS I
Sbjct: 613 VRKMMEERGVEKTPGCSSI 631
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 161 CGNMKAAKEFYDRMTEKNSVT---WVAMIAGYGKCGEVRE---AKKVFDEISEPDASCWA 214
C +M KE + +M ++ ++ + + E R K+ + + + W
Sbjct: 64 CTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFSWN 123
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI-SACTQLGDVEMAAILAKHVDE 273
YV++ A+ +Y+ M ++ I + + C A + HV +
Sbjct: 124 MAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQ 183
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
D +V NA+IH+ CG L A + F +D++S++S+I + G + EA D+
Sbjct: 184 LGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDL 243
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSH 358
+ KM + P++VT IGV++A +
Sbjct: 244 YYKMGELNVMPDEVTMIGVVSASAQ 268
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 240/439 (54%), Gaps = 21/439 (4%)
Query: 55 ARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
AR++FD+ C + W S+I +V ++ LY KM L V+ T V++A
Sbjct: 209 ARKLFDE--SCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSAS 266
Query: 114 ARVPSLLEAVICGYTKIGLMDDAQRLFDSMAER----NVISWSAMVAGYANCGNMKAAKE 169
A+ LE + G ++L S+ E V +A++ Y C N++AAK
Sbjct: 267 AQ----LENLALG----------RKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKI 312
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++ MT+K V+W M+ GY K G + A ++F+E+ E D W A+ +VQ +K A
Sbjct: 313 LFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEA 372
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ ++ M+ +V ++ +V +SAC+QLG +++ + +VD+ + AL+ M
Sbjct: 373 LALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDM 432
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG + A + F + ++ ++++++I A HG+ A+ F +M + G+ P+++TF
Sbjct: 433 YAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITF 492
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
IGVL+AC HGGLV+ G F MT +GI P +H +C+VDLLGR+G LE+A LI
Sbjct: 493 IGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMP 552
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
DA WGAL ++H N +GE AA LLEL P G LLAN+Y W+ +
Sbjct: 553 FEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARK 612
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ M+ E +K+PGCS I
Sbjct: 613 VRKMMEERGVEKTPGCSSI 631
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 7/205 (3%)
Query: 161 CGNMKAAKEFYDRMTEKNSVT---WVAMIAGYGKCGEVRE---AKKVFDEISEPDASCWA 214
C +M KE + +M ++ ++ + + E R K+ + + + W
Sbjct: 64 CTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWN 123
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI-SACTQLGDVEMAAILAKHVDE 273
YV++ A+ +Y+ M ++ I + + C A + HV +
Sbjct: 124 MAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQ 183
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDM 333
D +V NA+IH+ CG L A + F +D++S++S+I + G + EA D+
Sbjct: 184 LGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDL 243
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSH 358
+ KM + P++VT IGV++A +
Sbjct: 244 YYKMGELNVMPDEVTMIGVVSASAQ 268
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 247/448 (55%), Gaps = 24/448 (5%)
Query: 51 NLSYARQVFDQIPK---CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS 107
NL A+++FD++ + K + W S+I +V + F ++ L+ + + G+ FT
Sbjct: 214 NLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLG 273
Query: 108 SVLNACARVPSLLEAVICGYTKI--GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
SVL CA + S+ I GL + N I A+V Y+ C ++
Sbjct: 274 SVLAGCADMASIRRGKEAHSLAIVRGL------------QSNSIVGGALVEMYSKCQDIV 321
Query: 166 AAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASCWAAMTVCYV 221
AA+ +D ++E++ TW A+I+GY +C + + +++ ++ EP+ W + YV
Sbjct: 322 AAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYV 381
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAI-SACTQLGDVEMAAILAKHVDEGCCDRTN 280
+N +A++++ M+ N+R ++ VG I +AC++L ++ + + D
Sbjct: 382 ENKQYDSAMQLFTEMQIANLR-PDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDV 440
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
++ AL+ M++KCG + +R ++ I N +++S+++M+TA+A HG +E + +F +M
Sbjct: 441 HIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLAS 500
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
+ P+ VTF+ VL++C H G +E G + LM + + P +H TCMVDLL R+GQL +
Sbjct: 501 KVRPDHVTFLAVLSSCVHAGSLEIGHECLALMV-AYNVMPSLKHYTCMVDLLSRAGQLYE 559
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
A+ LI + DA TW ALLG C +H +LGEIAA L+EL P GN +LAN+YAS
Sbjct: 560 AYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPGNYVMLANLYAS 619
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
GKW + ++ + +K PGCSWI
Sbjct: 620 AGKWHYLTQTRQLMKDMGMQKRPGCSWI 647
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 168/369 (45%), Gaps = 52/369 (14%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLI-RLLQLPGDNLSY--ARQVFDQIPKCKTQFLWTS 73
KQ+H++ +K+ H +F+ +LLQ+ N S+ A VFD +P + WT+
Sbjct: 68 KQLHAHSIKSGFNAH-------EFVTTKLLQMYARNCSFENACHVFDTMP-LRNLHSWTA 119
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLT--SGFTFSSVLNACARVPSLLEAVICGYTKIG 131
L+R ++ F ++ L+ ++ GV F F VL C CG +
Sbjct: 120 LLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKIC-----------CGLCAVE 168
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
L R MA ++ G+MK+A E + R + K++ ++ AMIAGY +
Sbjct: 169 L----GRQMHGMALKHD-------------GDMKSAFEMFSRFSRKSAASYNAMIAGYWE 211
Query: 192 CGEVREAKKVFDEIS----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
G + +AK++FD + + D W +M YV A +++ + +E +
Sbjct: 212 NGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFT 271
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ ++ C + + + V AL+ M+SKC + A F +
Sbjct: 272 LGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVS 331
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+D+ +++++I+ +A ++++ ++ KMR +G EPN T+ G++ G VE+ K
Sbjct: 332 ERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGII-----AGYVEN--K 384
Query: 368 QFELMTRVF 376
Q++ ++F
Sbjct: 385 QYDSAMQLF 393
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y + A VFD + + W A+ Y++ G+ + A +++ + E VR+
Sbjct: 93 YARNCSFENACHVFDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFF 152
Query: 249 VGAI--SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
V + C L VE+ + AL H G + A+ FSR
Sbjct: 153 VFPVVLKICCGLCAVELGRQMH--------------GMALKH----DGDMKSAFEMFSRF 194
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
K SY++MI + ++G +A ++F +M EG++ +++++ +++ G L ++
Sbjct: 195 SRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAY 254
Query: 367 KQFELMTRVFGIKP 380
F + + GI+P
Sbjct: 255 SLFRDLLKE-GIEP 267
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/504 (29%), Positives = 252/504 (50%), Gaps = 69/504 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ AR VFD I CK WT ++ + + + +S+ L+ +M +G + FT S L
Sbjct: 186 NVDVARHVFDDIC-CKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGAL 244
Query: 111 NACARVPSLLEAVICG-------------------------YTKIGLMDDAQRLFDSMAE 145
+C LEA G Y K G + DAQRLF+ M +
Sbjct: 245 KSCLG----LEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK 300
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAG------------- 188
++I WS M+A YA K A + + RM + N+ T+ +++
Sbjct: 301 TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI 360
Query: 189 ----------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
Y KCGE+ + K+F+E+ + + W + V YVQ G
Sbjct: 361 HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDG 420
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A+ ++ M + +++ +EV + A L +E + + ++ V+N+L
Sbjct: 421 ERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSL 480
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M++KCG ++ A F ++ +D +S+++MI ++ HG S EAL++F M++ +PN+
Sbjct: 481 IDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNK 540
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TF+GVL+ACS+ GL+ G FE M++ + IKP EH TCMV LLGR G+ ++A LI
Sbjct: 541 LTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIG 600
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ W ALLGAC +H +LG + A+H+LE+ P LL+N+YA+ G+W +
Sbjct: 601 EIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDN 660
Query: 467 SEIVKMMISETEKKKSPGCSWISS 490
V+ + + + +K PG SW+ +
Sbjct: 661 VAFVRKYMQKKKVRKEPGLSWVEN 684
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 41/334 (12%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK--------- 177
Y + + DA +LFD M + N IS+ + GY+ A F R+ ++
Sbjct: 80 YVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVF 139
Query: 178 ------------------------------NSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
++ A+I Y G V A+ VFD+I
Sbjct: 140 TTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICC 199
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W M CY +N + + +++++ MR + + + GA+ +C L + +
Sbjct: 200 KDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSV 259
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+GC D +V AL+ +++K G + A R F + D+I +S MI +A +S
Sbjct: 260 HGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRS 319
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+EALD+FL+MR + PN TF VL AC+ ++ G KQ FG+
Sbjct: 320 KEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLG-KQIHSCVLKFGLNSNVFVSNA 378
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
++D+ + G++E + L + D D TW ++
Sbjct: 379 IMDVYAKCGEIENSMKLFEELPDRNDV-TWNTII 411
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 215/471 (45%), Gaps = 67/471 (14%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K +H ++LK T +AQ ++ + ++L A ++FD++P+ T + +L +
Sbjct: 55 KHLHCHILKRGTS----LDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNT-ISFVTLAQ 109
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL---------------NACA-----RV 116
+ F Q++ ++ + G + F F+++L +AC
Sbjct: 110 GYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHA 169
Query: 117 PSLL-EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
+ + A+I Y+ G +D A+ +FD + ++++SW+ MVA YA + + + +++M
Sbjct: 170 DAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMR 229
Query: 176 ----EKNSVTW-----------------------------------VAMIAGYGKCGEVR 196
+ N+ T +A++ Y K GE+
Sbjct: 230 IMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEII 289
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
+A+++F+E+ + D W+ M Y Q+ +K A++++ MRQ +V + + AC
Sbjct: 290 DAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACA 349
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
+++ + V + + +VSNA++ +++KCG ++ + + F + +++ +++++
Sbjct: 350 SSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNT 409
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
+I + G + A+++F M ++P +VT+ VL A + +E G + L +
Sbjct: 410 IIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTM 469
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
K T ++D+ + G++ A L D + D +W A++ +H
Sbjct: 470 YNKD-TVVANSLIDMYAKCGRINDA-RLTFDKMNKRDEVSWNAMICGYSMH 518
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 145/359 (40%), Gaps = 73/359 (20%)
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAK----KVF 202
++ + + ++ Y +++ A + +D M + N++++V + GY + + +A ++F
Sbjct: 69 DLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIF 128
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
E E + + + V A + + AC
Sbjct: 129 KEGHEVNPFVFTTLLKLLVSMDLAH--------------------LCWTLHACVYK---- 164
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
L H D +V ALI +S G +D+A F I KD++S++ M+ +A
Sbjct: 165 ----LGHHADA-------FVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYA 213
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC----------SHGGLVEDGCKQFELM 372
++ +E+L +F +MR G +PN T G L +C S G GC +L
Sbjct: 214 ENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLF 273
Query: 373 T------------------RVFGIKPLTEHL--TCMVDLLGRSGQLEKAHSLIMDYKD-- 410
R+F P T+ + + M+ +S + ++A L + +
Sbjct: 274 VGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTS 333
Query: 411 -FCDAGTWGALLGACKVHVNAELGEIAARHLLELG-PEKTGNSALLANIYASMGKWKDS 467
+ T+ ++L AC V+ +LG+ +L+ G S + ++YA G+ ++S
Sbjct: 334 VVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENS 392
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 252/495 (50%), Gaps = 62/495 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++FD++P+ + W ++I + +++ L+ +M G T ++V+++CA
Sbjct: 352 AIKLFDEMPE-RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCA 410
Query: 115 RVPSL-------LEAVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSA 153
R+ L +E V G Y K G ++ A+ +F+ + +NV+SW++
Sbjct: 411 RLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNS 470
Query: 154 MVAGYANCGNMKAAKEFYDRMTE---KNSVTWVA-------------------------- 184
M+AGY+ G+ K+ E + RM E + ++T ++
Sbjct: 471 MIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNR 530
Query: 185 ----------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+I Y KCG + A+ VF + + + W M YV+ G A+ ++
Sbjct: 531 VEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFT 590
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
MR+ V+ + + AC+QL +E + + E + V AL+ M++KCG
Sbjct: 591 DMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCG 650
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+D A F+++ +D +S++SMI A+ HG++ EAL +F KM+ +P++VTF+ +L+
Sbjct: 651 AVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILS 710
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC-D 413
ACSH GLV++GC F M +G KP EH +C++DLLGR G+L +A+ ++ D D
Sbjct: 711 ACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRED 770
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
G L AC +H +LGE R L+E P+ +L+N+YAS+ KW + V++
Sbjct: 771 VGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLK 830
Query: 474 ISETEKKKSPGCSWI 488
I E KK+PGCSWI
Sbjct: 831 IKELGLKKNPGCSWI 845
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 178/389 (45%), Gaps = 70/389 (17%)
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
Y KM V+ SGF V+ + A + Y K + +DA +LFD M ER+V S
Sbjct: 316 YGKMVHTHVIKSGFAMDVVVMSSA---------VGMYAKCNVFEDAIKLFDEMPERDVAS 366
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG------------------ 188
W+ +++ Y G + A E ++ M + +SVT +I+
Sbjct: 367 WNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELV 426
Query: 189 -----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
YGKCG + AK+VF++I + W +M Y G +K+ IE
Sbjct: 427 RSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIE 486
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M +E +R + + + AC++ ++++ + ++ + +V+++LI ++
Sbjct: 487 LFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYF 546
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG + A F + +V+S++ MI+ + G EAL +F MR G++P+ +TF
Sbjct: 547 KCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTS 606
Query: 352 VLTACSHGGLVEDGCK--------QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
VL ACS ++E G + + E+ V G ++D+ + G +++A
Sbjct: 607 VLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG---------ALLDMYAKCGAVDEALH 657
Query: 404 LI--MDYKDFCDAGTWGALLGACKVHVNA 430
+ + +DF +W +++ A H A
Sbjct: 658 IFNQLPERDFV---SWTSMIAAYGSHGQA 683
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 146/348 (41%), Gaps = 84/348 (24%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A++VF+QI + K W S+I + L + I L+ +M G+ + T SS+L
Sbjct: 450 LEMAKEVFEQIQR-KNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILM 508
Query: 112 ACARVPSL-LEAVICGYT--------------------KIGLMDDAQRLFDSMAERNVIS 150
AC+R +L L I GY K G + A+ +F +M + NV+S
Sbjct: 509 ACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVS 568
Query: 151 WSAMVAGYANCGN-----------------------------------MKAAKEFYDRMT 175
W+ M++GY G+ ++ KE ++ +
Sbjct: 569 WNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFII 628
Query: 176 EK----NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
E N V A++ Y KCG V EA +F+++ E D W +M Y +G A A++
Sbjct: 629 ESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALK 688
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-------- 283
+++ M+Q + + +V + +SAC+ G VDEGC ++
Sbjct: 689 LFEKMQQSDAKPDKVTFLAILSACSHAG----------LVDEGCYYFNQMIAEYGFKPAV 738
Query: 284 ---NALIHMHSKCGYLDLAWREFSRIKN--KDVISYSSMITAFADHGK 326
+ LI + + G L A+ R + +DV S++ +A H K
Sbjct: 739 EHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKK 786
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 113/229 (49%), Gaps = 6/229 (2%)
Query: 177 KNSVTWV-AMIAGYGKCGEVREAKKVFDEISEP-DASCWAAMTVCYVQNGYAKAAIEMY- 233
+N++T ++I Y C + AK VF I P D + W + +N +E++
Sbjct: 227 QNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFH 286
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+++ ++ + AC+ LG V ++ HV + V ++ + M++KC
Sbjct: 287 RLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKC 346
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
+ A + F + +DV S++++I+ + G+ ++AL++F +M+ G +P+ VT V+
Sbjct: 347 NVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVI 406
Query: 354 TACSHGGLVEDGCK-QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
++C+ +E G + EL+ F + + +VD+ G+ G LE A
Sbjct: 407 SSCARLLDLERGKEIHMELVRSGFALDGFVS--SALVDMYGKCGCLEMA 453
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 26/180 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ A VF +PK W +I +V + ++++++ M + GV TF+SVL
Sbjct: 550 NIGSAENVFQNMPKTNV-VSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVL 608
Query: 111 NACARVPSL----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVI 149
AC+++ L + V+ G Y K G +D+A +F+ + ER+ +
Sbjct: 609 PACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFV 668
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNS----VTWVAMIAGYGKCGEVREAKKVFDEI 205
SW++M+A Y + G A + +++M + ++ VT++A+++ G V E F+++
Sbjct: 669 SWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQM 728
>gi|125550574|gb|EAY96283.1| hypothetical protein OsI_18181 [Oryza sativa Indica Group]
Length = 661
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 239/448 (53%), Gaps = 18/448 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-SGFTFSSVLNAC 113
AR++FD +P + F WT++++ + + R++ ++ KM V+ + + V N C
Sbjct: 173 ARRLFDLMPY-RNVFSWTTMVQGYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDNGC 231
Query: 114 A--------RVPSL----LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
R+P + A+ G G +DDA +LFD M +NV+SW+ MV G A
Sbjct: 232 IQEALELFNRMPQMNSYSWNAMATGLMSAGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQN 291
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
G + A+EF+DRM +K+ W +MI Y G+V +A+++FD + + W + Y
Sbjct: 292 GFVSRAREFFDRMPKKDIPAWNSMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYS 351
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
N A+ ++ +M + V ++ + +V L+ + G TN
Sbjct: 352 MNNLKDEALRLFLLMLRSAVSPDSTTLISVLVVSESTMEVRQIHGLSTKL--GYQPETN- 408
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
+ N L+ M+S+ G L AW F R+ KD I+++SMI A A+HG + AL F +M G
Sbjct: 409 LGNTLVSMYSRSGDLSSAWLAFRRLNEKDAITWTSMIQALANHGCAPCALQGFAQMLRCG 468
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
+P+ TF VL+AC+H GLVE G K F+ ++ V+G++P EH +C+VDLLGR+G + +A
Sbjct: 469 YKPSSTTFTAVLSACNHVGLVEKGRKIFKSISHVYGLEPTIEHYSCLVDLLGRAGYVREA 528
Query: 402 HSLIMDY-KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
++ +D CD G LLG+C H E+G L+++ P +G LLAN++AS
Sbjct: 529 KEVVDGMQRDMCDEAILGTLLGSCMTHNEVEVGRAVGEDLVKIDPSGSGGYTLLANVFAS 588
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
G W + V ++ ++ KK+PG S I
Sbjct: 589 GGMWNEVASVWKIMKGSKVKKTPGFSQI 616
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 162/364 (44%), Gaps = 48/364 (13%)
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
GY K G +D A+RLFD MA +NV++W+ MV+GY G + A+ +D M +N +W M
Sbjct: 132 GYVKAGQVDRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTM 191
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
+ GY G +REA+++FD++ E + W M YV NG + A+E++ M Q N
Sbjct: 192 VQGYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDNGCIQEALELFNRMPQMNSYSWN 251
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFS 304
G +SA G V+ A L + N VS ++ ++ G++ A F
Sbjct: 252 AMATGLMSA----GKVDDAVQLFDKMPH-----KNVVSWTIMVTGLAQNGFVSRAREFFD 302
Query: 305 RIKNKDVISYSSMITAFADHGK-------------------------------SQEALDM 333
R+ KD+ +++SMITA+ + G+ EAL +
Sbjct: 303 RMPKKDIPAWNSMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRL 362
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
FL M + P+ T I VL V +Q ++ G +P T +V +
Sbjct: 363 FLLMLRSAVSPDSTTLISVLVVSESTMEV----RQIHGLSTKLGYQPETNLGNTLVSMYS 418
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG--PEKTGNS 451
RSG L A L + DA TW +++ A H A +L G P T +
Sbjct: 419 RSGDLSSAW-LAFRRLNEKDAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFT 477
Query: 452 ALLA 455
A+L+
Sbjct: 478 AVLS 481
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 243/439 (55%), Gaps = 11/439 (2%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L AR++FD++ + WT+L+ + ++ ++ +M G G+ L
Sbjct: 181 SLPDARKLFDEMAD-RDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAG---GGWPNEVTL 236
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
A A + G +G M Q + +S +V +A+V + CG + +AKE
Sbjct: 237 VAAASAAGQI-----GLLGLGRMVH-QCVVESGVRMSVNLENALVDMFGKCGCVASAKEI 290
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D M K+ +W +M++ Y KCG++ A K+F EI +A W+ M Y Q + A+
Sbjct: 291 FDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAM 350
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL-AKHVDEGCCDRTNYVSNALIHM 289
++ M V + +V +SAC QLG +++ L ++ + T +SNA I M
Sbjct: 351 RIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDM 410
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+KCG + A R F +++K+V+S+++MI A A HG+S+EAL +F K + GI P+++T+
Sbjct: 411 FAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITY 470
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
IGVL+ACSH GLV +G F+ M V+GI+P EH CM+DLLG+ G LE+A +
Sbjct: 471 IGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMP 530
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D WGALL AC++H N E+G+ AA L+ L P +G L++ IYAS KW ++
Sbjct: 531 VGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKM 590
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ + KK+PGCS I
Sbjct: 591 IRTVMRDRGVKKNPGCSSI 609
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 198 AKKVFDEISE-PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
A V + +E P+A A M +++ G A+ +++ + ++ + +V A+ A T
Sbjct: 84 AAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAAT 143
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
AI G ++ V NAL+HM++ L A + F + ++DV+S+++
Sbjct: 144 T-SSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTT 202
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIE-PNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
++ +A G EA +F +M G PN+VT + +A GL+ G + +
Sbjct: 203 LVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVES 262
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G++ +VD+ G+ G + A I D D +W +++ A
Sbjct: 263 -GVRMSVNLENALVDMFGKCGCVASAKE-IFDGMPIKDVYSWTSMVSA 308
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 253/457 (55%), Gaps = 23/457 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL-TSGFTFSSVLNAC 113
AR +FD++P + W+++I ++ F++ L+ M R G++ + T + + AC
Sbjct: 218 ARDLFDRMPD-RNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKAC 276
Query: 114 ARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+ E +VI Y+ +G D A ++F +++++++++W+
Sbjct: 277 GNCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWN 336
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
++++GY + ++AA + RM K+ ++W AMIAG+ K G V A ++F+ + D
Sbjct: 337 SLISGYIHNNEVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFV 396
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W A+ +V N + A+ Y M E + + + + ++A L + + +
Sbjct: 397 WTAIISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCIL 456
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ + + N+LI +SK G + A+R F + +VISY+S+I+ FA +G EAL
Sbjct: 457 KMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALG 516
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
++ KM++EG EPN VTF+ VL+AC+H GLV++G F M +GI+P +H CMVD+L
Sbjct: 517 IYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDIL 576
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR+G L++A LI +G WGA+LGA K H+ +L ++AA+ + +L P+
Sbjct: 577 GRAGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNATPYV 636
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
+L+N+Y++ GK D ++VKM + KKSPGCSWI+
Sbjct: 637 VLSNMYSAAGKKIDGDLVKMAKNLKGIKKSPGCSWIT 673
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 161/334 (48%), Gaps = 51/334 (15%)
Query: 55 ARQVFDQIPKCKT---QFLWTSLIRN--HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
AR++FD++P+ T + ++ IRN +V A+ S+L + + GF +
Sbjct: 91 ARRLFDEMPQRTTVSNNAMISAYIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGK 150
Query: 110 LNACARV----------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
+ ++ P+ A+I GY K+G +++A R+F++M ER+V+SWSAMV G
Sbjct: 151 FHMAEKLYRETPYEFRDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLC 210
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
G + AA++ +DRM ++N V+W AMI GY M
Sbjct: 211 RDGRVAAARDLFDRMPDRNVVSWSAMIDGY--------------------------MGEG 244
Query: 220 YVQNGYAKAAIEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
+ Q G+ ++ M++E V ++ M AC G + + V +
Sbjct: 245 FFQEGFC-----LFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIHGLVSRLGFEF 299
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
N +SN++I M+S G D+A + F + +KD+++++S+I+ + + + + A +F +M
Sbjct: 300 DNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAYRVFGRMP 359
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+ + +++ ++ S G VE+ + F ++
Sbjct: 360 VKDV----ISWTAMIAGFSKSGRVENAIELFNML 389
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 51/307 (16%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG-NMKAAKEFYDRMTEKNSV 180
A++ + + G + +A+RLFD M +R +S +AM++ Y G N+ A E + + E+N V
Sbjct: 77 AMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMISAYIRNGCNVGKAYELFSVLAERNLV 136
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEP--DASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
++ AMI G+ K G+ A+K++ E D +C A+ Y++ G A+ +++ M +
Sbjct: 137 SYAAMIMGFVKAGKFHMAEKLYRETPYEFRDPACSNALINGYLKMGEVNEALRIFENMGE 196
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+V +S AMV +G C + G +
Sbjct: 197 RDV-VSWSAMV-----------------------DGLC---------------RDGRVAA 217
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACS 357
A F R+ +++V+S+S+MI + G QE +F+ M+ EG +E N T + AC
Sbjct: 218 ARDLFDRMPDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACG 277
Query: 358 HGGLVEDGCKQFELMTRVFGIK---PLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
+ G + +G + L++R+ G + L+ + M +LG + +K + D KD
Sbjct: 278 NCGRMSEGMQIHGLVSRL-GFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSD-KDIV-- 333
Query: 415 GTWGALL 421
TW +L+
Sbjct: 334 -TWNSLI 339
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/506 (29%), Positives = 266/506 (52%), Gaps = 44/506 (8%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGD--NLSYARQVFDQIPKCKTQFLWTS 73
L+ VHS ++ + Y + ++L++ +++ AR+VFD+IP+ + +
Sbjct: 59 LRTVHSRIIS------EDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPE-RNVIIINV 111
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL------------- 120
+IR++V + +R+ I ++ M V +TF VL AC+ +++
Sbjct: 112 MIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVG 171
Query: 121 --------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN----------CG 162
++ Y K G + +A+ + D M+ R+V+SW+++VAGYA C
Sbjct: 172 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCR 231
Query: 163 NMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
M++ K +D T + + V+ V K +F ++ + W M Y++
Sbjct: 232 EMESVKISHDAGTMASLLPAVSNTT----TENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 287
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
N A+E+Y M + V++ + AC + + + +++ +
Sbjct: 288 NAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 347
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
NALI M++KCG LD A F +K++DV+S+++MI+A+ G+ +A+ +F KM++ G+
Sbjct: 348 ENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGL 407
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
P+ + F+ L ACSH GL+E+G F+LMT + I P EHL CMVDLLGR+G++++A+
Sbjct: 408 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 467
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
I + + WGALLGAC+VH N ++G +AA L +L PE++G LL+NIYA G
Sbjct: 468 KFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 527
Query: 463 KWKDSEIVKMMISETEKKKSPGCSWI 488
+W++ ++ ++ KK+PG S +
Sbjct: 528 RWEEVTNIRNIMKSKGLKKNPGASNV 553
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 244/466 (52%), Gaps = 35/466 (7%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
ARQVF+ + K ++ W ++I + +++ ++ M V T S L +C
Sbjct: 238 ARQVFNVMLK-RSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCG 296
Query: 115 ---------RVPSLLE------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+V L++ A++ Y++ G +D+A +F E++VI+W++
Sbjct: 297 YLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTS 356
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG-------YGKCGEVREAKKVF 202
M+ GY GN K+A M N+VT ++++ Y KC V + +VF
Sbjct: 357 MINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVSYSFQVF 416
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+ S+ W A+ + N A+ A+ ++K M E V + I A L D++
Sbjct: 417 AKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLK 476
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK--DVISYSSMITA 320
L ++ V LI M+SKCG LD A + F I NK D+I +S +I
Sbjct: 477 QVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAG 536
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
+ HG + A+ +F +M + G++PN++TF VL ACSH GLV+DG F+ M + P
Sbjct: 537 YGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSP 596
Query: 381 LTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHL 440
L H TC+VDLLGR+G+L++A+ LI + WGALLGAC +H N ELGE+AA L
Sbjct: 597 LPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERL 656
Query: 441 LELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
EL PE TGN LLANIYA++G+WKD+E V+ ++S+ +K+P S
Sbjct: 657 FELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQS 702
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 143/309 (46%), Gaps = 29/309 (9%)
Query: 73 SLIRNHVLHAHFRQSILLYAK--MHRLGVLTSGFTFSSVLNACARV------PSLL--EA 122
SL + +LH H S LL++ +H L + F + ++ PSL A
Sbjct: 94 SLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNA 153
Query: 123 VICGYTKIGLMDDAQRLFDSMA----------ERNVISWSAMVAGYANCGNMKAAKE--- 169
+I Y G DA R+FDSM ++ + V N G + +
Sbjct: 154 IIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVS 213
Query: 170 -FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
F M +NS ++A Y CG+V A++VF+ + + W M + QNG +
Sbjct: 214 GFSSNMFVQNS-----LLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEE 268
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+ ++ M V +V A+ +C L ++E+ + K V + V NAL+
Sbjct: 269 ALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVD 328
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+S+CG +D A F+ K KDVI+++SMI + +G ++ AL + M+ +G+ PN VT
Sbjct: 329 MYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388
Query: 349 FIGVLTACS 357
+L+AC+
Sbjct: 389 LASLLSACA 397
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 122/244 (50%), Gaps = 3/244 (1%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR-QENVRISEVA 247
Y CG V A+K+FD++S+P W A+ YV G+ A+ ++ M +
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYT 186
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
I AC+ + + + ++ +V N+L+ M+ CG + LA + F+ +
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+ V+S+++MI+ + +G+ +EAL +F M + +EP+ T + L +C + +E G K
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIK 306
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+L+ + ++ E +VD+ R G +++A + + K+ D TW +++ ++
Sbjct: 307 VHKLVQKNH-LQEKIEVRNALVDMYSRCGGIDEASLVFAETKE-KDVITWTSMINGYIMN 364
Query: 428 VNAE 431
NA+
Sbjct: 365 GNAK 368
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 57/267 (21%)
Query: 2 TSKYLVPRSKTFNQLKQV---HSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--------D 50
T ++P LKQV HSYL+++ F+ ++ + G
Sbjct: 461 TFNSVIPAYAILADLKQVMNLHSYLVRS------------GFISKIAVITGLIDMYSKCG 508
Query: 51 NLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+L YA ++FD+IP K K +W+ LI + +H H ++LL+ +M G+ + TF+SV
Sbjct: 509 SLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSV 568
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNM 164
L+AC+ GL+DD LF M E S ++ +V G +
Sbjct: 569 LHACSHR--------------GLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRL 614
Query: 165 KAAKEFYDRMT-EKNSVTWVAMIAGYGKC--------GEVREAKKVFDEISEPDASCWAA 215
A + M ++N W A++ G C GEV A+++F E+ +
Sbjct: 615 DEAYDLIKSMPFQQNHSIWGALL---GACLIHQNVELGEV-AAERLF-ELEPESTGNYIL 669
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVR 242
+ Y G K A + +M + +R
Sbjct: 670 LANIYAAVGRWKDAENVRHIMSKIGLR 696
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 236/440 (53%), Gaps = 5/440 (1%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D+L AR++ D + W ++I +V + ++ + +MH +G+ +T++S+
Sbjct: 231 DDLVAARELLDGLTY-PIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSL 289
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS-AMVAGYANCGNMKAAK 168
++AC + CG G + R + V+S + A++ Y M A+
Sbjct: 290 ISACGSCNEKMGMFNCGRQVHGYI---LRTVVEPSHHFVLSVNNALITFYTKYDRMIEAR 346
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+D+M ++ ++W A+++GY + EA +F E+ E + W M QNG+ +
Sbjct: 347 RVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEE 406
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
++++ M+ E + + A GAI+AC+ LG ++ + V D NALI
Sbjct: 407 GLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALIT 466
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+S+CG ++ A F + D +S+++MI A A HG +A+++F +M E I P+++T
Sbjct: 467 MYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRIT 526
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+ +LTAC+H GL+++G F+ M +GI P +H ++DLL R+G KA S+I
Sbjct: 527 FLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSM 586
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
A W ALL C++H N ELG AA LLEL P + G +L+N+YA++G+W +
Sbjct: 587 PFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVA 646
Query: 469 IVKMMISETEKKKSPGCSWI 488
V++++ E KK PGCSW+
Sbjct: 647 RVRLLMRERGVKKEPGCSWV 666
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/499 (23%), Positives = 214/499 (42%), Gaps = 109/499 (21%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVFDQIPK----CKTQFL 70
+ VH+++L + KP+ L RL+ + N++YAR++FD+IPK +T L
Sbjct: 25 RAVHAHILTSGFKPN------TFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLL 78
Query: 71 ----------------------------WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTS 102
+ ++I + ++ L+ +M R G L
Sbjct: 79 SAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPD 138
Query: 103 GFTFSSVLNACARVPSL---LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
FTFSSVL+A + + + + C K+G + L S+ +A+++ Y
Sbjct: 139 PFTFSSVLSALSLIADEERHCQMLHCEVIKLGTL-----LIPSVT-------NALLSCYV 186
Query: 160 NCGN---------MKAAKEFYDRMTEKNSV---TWVAMIAGYGKCGEVREAKKVFDEISE 207
C + M +A++ +D T KN + +W MIAGY + ++ A+++ D ++
Sbjct: 187 CCASSPLVKSSQLMASARKVFDE-TPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTY 245
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD------- 260
P W AM YV+ G + A + ++ M ++ E ISAC +
Sbjct: 246 PIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNC 305
Query: 261 -VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS--- 316
++ + + V E V+NALI ++K + A R F ++ +D+IS+++
Sbjct: 306 GRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLS 365
Query: 317 ----------------------------MITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
MI+ A +G +E L +F +M++EG+EP
Sbjct: 366 GYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYA 425
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F G +TACS G +++G + + R+ L+ ++ + R G +E A S+ +
Sbjct: 426 FAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAG-NALITMYSRCGVVESAESVFLTM 484
Query: 409 KDFCDAGTWGALLGACKVH 427
+ D+ +W A++ A H
Sbjct: 485 P-YVDSVSWNAMIAALAQH 502
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 101/246 (41%), Gaps = 55/246 (22%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP--------- 63
FN +QVH Y+L+T+ +P + + D + AR+VFD++P
Sbjct: 303 FNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNA 362
Query: 64 ---------------------KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTS 102
+ WT +I + + + L+ +M G+
Sbjct: 363 VLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPC 422
Query: 103 GFTFSSVLNACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFD 141
+ F+ + AC+ + SL A+I Y++ G+++ A+ +F
Sbjct: 423 DYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFL 482
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVRE 197
+M + +SW+AM+A A G+ A E +++M ++ + +T++ ++ G ++E
Sbjct: 483 TMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKE 542
Query: 198 AKKVFD 203
+ FD
Sbjct: 543 GRHYFD 548
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 258/500 (51%), Gaps = 63/500 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L+ AR+VFD +P C++ W S+I + + ++ ++ +M G TF S+L
Sbjct: 60 SLTDARKVFDGMP-CRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSIL 118
Query: 111 NACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVI 149
+AC +L A+I Y + ++A ++F M ++N+I
Sbjct: 119 DACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLI 178
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG----------------- 188
+WSA++ +A+ G+ A ++ M ++ N VT+++++ G
Sbjct: 179 TWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLI 238
Query: 189 ------------------YGKC--GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
YG+C GE+ A+ + E+ E + W + Y +G ++
Sbjct: 239 TEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSRE 298
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+E Y+ ++ E + + +V + ++ACT + ++ + E D V NAL +
Sbjct: 299 ALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTN 358
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKCG ++ A R F + + +S++ M+ A+A HG+S+E L + KM EG++ N +T
Sbjct: 359 MYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGIT 418
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+ VL++CSH GL+ +GC+ F + GI+ TEH C+VDLLGR+G+L++A I
Sbjct: 419 FVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKM 478
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+ TW +LLGAC+VH + + G++AAR LLEL P + S +L+NIY+ G WK++
Sbjct: 479 PSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAA 538
Query: 469 IVKMMISETEKKKSPGCSWI 488
++ ++ KK PG S I
Sbjct: 539 KLRRAMASRRVKKVPGISSI 558
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 4/247 (1%)
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A++ Y KCG + +A+KVFD + W +M Y + + A +++ M+ E R
Sbjct: 49 TALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGER 108
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
V + + AC +++ + + + E + +V ALI M+++C + A +
Sbjct: 109 CDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQV 168
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F R+K K++I++S++ITAFADHG EAL F M+ EGI PN+VTFI +L + +
Sbjct: 169 FGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 228
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR--SGQLEKAHSLIMDYKDFCDAGTWGAL 420
E+ + L+ G+ T +V++ GR +G+L+ A +I+ D W L
Sbjct: 229 EE-LSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVA-EVILQEMDEQQITAWNVL 286
Query: 421 LGACKVH 427
+ +H
Sbjct: 287 INGYTLH 293
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 159/351 (45%), Gaps = 43/351 (12%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA---------------------- 159
A++ YTK G + DA+++FD M R+V +W++M++ Y+
Sbjct: 50 ALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERC 109
Query: 160 -------------NCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVF 202
N N++ K + ++E + A+I Y +C A +VF
Sbjct: 110 DRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVF 169
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+ + + W+A+ + +G+ A+ +++M+QE + + V + ++ T +E
Sbjct: 170 GRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE 229
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKC--GYLDLAWREFSRIKNKDVISYSSMITA 320
+ + + E D T +SNAL++++ +C G LD+A + + + +++ +I
Sbjct: 230 ELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLING 289
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
+ HG+S+EAL+ + +++ E I ++VTFI VL AC+ + +G K G+
Sbjct: 290 YTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDS 348
Query: 381 LTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
+ ++ + G +E A I D A +W +L A H +E
Sbjct: 349 DVIVKNALTNMYSKCGSMENARR-IFDSMPIRSAVSWNGMLQAYAQHGESE 398
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+V+ AL++ ++KCG L A + F + + V +++SMI+A++ +S EA +F +M++E
Sbjct: 46 FVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHE 105
Query: 341 GIEPNQVTFIGVLTAC------SHGGLVEDGCKQ--FEL 371
G ++VTF+ +L AC HG V + + FEL
Sbjct: 106 GERCDRVTFLSILDACVNPENLQHGKHVRESISETSFEL 144
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 252/495 (50%), Gaps = 62/495 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++FD++P+ + W ++I + +++ L+ +M G T ++V+++CA
Sbjct: 160 AIKLFDEMPE-RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCA 218
Query: 115 RVPSL-------LEAVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSA 153
R+ L +E V G Y K G ++ A+ +F+ + +NV+SW++
Sbjct: 219 RLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNS 278
Query: 154 MVAGYANCGNMKAAKEFYDRMTE---KNSVTWVA-------------------------- 184
M+AGY+ G+ K+ E + RM E + ++T ++
Sbjct: 279 MIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNR 338
Query: 185 ----------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+I Y KCG + A+ VF + + + W M YV+ G A+ ++
Sbjct: 339 VEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFT 398
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
MR+ V+ + + AC+QL +E + + E + V AL+ M++KCG
Sbjct: 399 DMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCG 458
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+D A F+++ +D +S++SMI A+ HG++ EAL +F KM+ +P++VTF+ +L+
Sbjct: 459 AVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILS 518
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC-D 413
ACSH GLV++GC F M +G KP EH +C++DLLGR G+L +A+ ++ D D
Sbjct: 519 ACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRED 578
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
G L AC +H +LGE R L+E P+ +L+N+YAS+ KW + V++
Sbjct: 579 VGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLK 638
Query: 474 ISETEKKKSPGCSWI 488
I E KK+PGCSWI
Sbjct: 639 IKELGLKKNPGCSWI 653
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 178/389 (45%), Gaps = 70/389 (17%)
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
Y KM V+ SGF V+ + A + Y K + +DA +LFD M ER+V S
Sbjct: 124 YGKMVHTHVIKSGFAMDVVVMSSA---------VGMYAKCNVFEDAIKLFDEMPERDVAS 174
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG------------------ 188
W+ +++ Y G + A E ++ M + +SVT +I+
Sbjct: 175 WNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELV 234
Query: 189 -----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
YGKCG + AK+VF++I + W +M Y G +K+ IE
Sbjct: 235 RSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIE 294
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M +E +R + + + AC++ ++++ + ++ + +V+++LI ++
Sbjct: 295 LFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYF 354
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG + A F + +V+S++ MI+ + G EAL +F MR G++P+ +TF
Sbjct: 355 KCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTS 414
Query: 352 VLTACSHGGLVEDGCK--------QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
VL ACS ++E G + + E+ V G ++D+ + G +++A
Sbjct: 415 VLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG---------ALLDMYAKCGAVDEALH 465
Query: 404 LI--MDYKDFCDAGTWGALLGACKVHVNA 430
+ + +DF +W +++ A H A
Sbjct: 466 IFNQLPERDFV---SWTSMIAAYGSHGQA 491
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 123/284 (43%), Gaps = 71/284 (25%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A++VF+QI + K W S+I + L + I L+ +M G+ + T SS+L
Sbjct: 258 LEMAKEVFEQIQR-KNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILM 316
Query: 112 ACARVPSL-LEAVICGYT--------------------KIGLMDDAQRLFDSMAERNVIS 150
AC+R +L L I GY K G + A+ +F +M + NV+S
Sbjct: 317 ACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVS 376
Query: 151 WSAMVAGYANCGN-----------------------------------MKAAKEFYDRMT 175
W+ M++GY G+ ++ KE ++ +
Sbjct: 377 WNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFII 436
Query: 176 EK----NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
E N V A++ Y KCG V EA +F+++ E D W +M Y +G A A++
Sbjct: 437 ESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALK 496
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
+++ M+Q + + +V + +SAC+ G VDEGC
Sbjct: 497 LFEKMQQSDAKPDKVTFLAILSACSHAG----------LVDEGC 530
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 113/229 (49%), Gaps = 6/229 (2%)
Query: 177 KNSVTWV-AMIAGYGKCGEVREAKKVFDEISEP-DASCWAAMTVCYVQNGYAKAAIEMY- 233
+N++T ++I Y C + AK VF I P D + W + +N +E++
Sbjct: 35 QNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFH 94
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+++ ++ + AC+ LG V ++ HV + V ++ + M++KC
Sbjct: 95 RLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKC 154
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
+ A + F + +DV S++++I+ + G+ ++AL++F +M+ G +P+ VT V+
Sbjct: 155 NVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVI 214
Query: 354 TACSHGGLVEDGCK-QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
++C+ +E G + EL+ F + + +VD+ G+ G LE A
Sbjct: 215 SSCARLLDLERGKEIHMELVRSGFALDGFVS--SALVDMYGKCGCLEMA 261
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 26/180 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ A VF +PK W +I +V + ++++++ M + GV TF+SVL
Sbjct: 358 NIGSAENVFQNMPKTNV-VSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVL 416
Query: 111 NACARVPSL----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVI 149
AC+++ L + V+ G Y K G +D+A +F+ + ER+ +
Sbjct: 417 PACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFV 476
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNS----VTWVAMIAGYGKCGEVREAKKVFDEI 205
SW++M+A Y + G A + +++M + ++ VT++A+++ G V E F+++
Sbjct: 477 SWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQM 536
>gi|125605648|gb|EAZ44684.1| hypothetical protein OsJ_29310 [Oryza sativa Japonica Group]
Length = 612
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 228/406 (56%), Gaps = 20/406 (4%)
Query: 105 TFSSVLNACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERN 147
T++++L AC R+ L A ++ GY G + A+ LFD MA R+
Sbjct: 159 TWNTLLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMARRD 218
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
V++W++M++GY+ G+M+ A++ +D M E++ V+W +M+ GY + G+V A+ VFD + +
Sbjct: 219 VVTWNSMISGYSRHGDMENARKMFDAMPERDVVSWNSMLDGYAQAGDVEMARLVFDGMPK 278
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAI 266
W + Y + + + ++ VM E N +E V ++AC LGD+E
Sbjct: 279 RSIVSWNVILALYAKLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEKGRW 338
Query: 267 LAKHVDEGCCDRTNYVSNALIH--MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ V E V M++KCG ++ A F+ + K V S++SMI + H
Sbjct: 339 VHDLVQERWDRLVPDVLLLTTLLTMYAKCGVMETAREIFNSMGEKSVPSWNSMIIGYGLH 398
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
G+S++AL++FL+M +G PN+ TFI VL++C+HGGLV +G F+ M R + I+P +EH
Sbjct: 399 GQSEKALELFLEMERDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPKSEH 458
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
CM+DLLGR+G LE++ +LI + + WG L+ A + N +LGE + L+E+
Sbjct: 459 FGCMMDLLGRAGLLEQSENLIENLQGKVSEALWGILMSASQTQNNIKLGEFVGKKLIEMR 518
Query: 445 PEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
P + G LL+NIYA+ G+W D E V+ ++ E +K G S + S
Sbjct: 519 PTEVGPYILLSNIYAAEGRWDDVEKVRKVMEEKGVEKDAGLSLVGS 564
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 40/231 (17%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A+RL + + ++W+ ++ G + AA+ +D M E++ V++ +M+AGY G++
Sbjct: 145 ARRLLADIPRPDAVTWNTLLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDL 204
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A+ +FD ++ D W +M Y ++G + A +M+ M + +V V+ +
Sbjct: 205 AGARNLFDGMARRDVVTWNSMISGYSRHGDMENARKMFDAMPERDV----VSWNSMLDGY 260
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
Q GDVEMA ++ F + + ++S++
Sbjct: 261 AQAGDVEMARLV-----------------------------------FDGMPKRSIVSWN 285
Query: 316 SMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDG 365
++ +A +E L +F M EG PN+ TF+ VLTAC++ G +E G
Sbjct: 286 VILALYAKLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEKG 336
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 259/542 (47%), Gaps = 81/542 (14%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ--LPGDNLSYARQVFDQIPKCKTQFLWTSL 74
KQ+H +L T P Y FL RLL+ YAR++ QI Q LW SL
Sbjct: 19 KQIHCLVL---TSP-IFYTRRDLFLSRLLRRCTAATQFRYARRLLCQIQTPSIQ-LWDSL 73
Query: 75 IRNHVLHAHF--------RQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS-------- 118
+ HF R S L Y +M R GV+ S TF +L A ++
Sbjct: 74 V------GHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQFHA 127
Query: 119 ------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
+ ++I GY+ GL + R+FD +++V+SW+AM+ G+ +
Sbjct: 128 HILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLE 187
Query: 167 AKEFYDRMTEK----NSVTWVAMIAG---------------------------------- 188
A ++ M N +T V+++
Sbjct: 188 AMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLV 247
Query: 189 --YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
YGKCG +A+KVFDE+ + W A+ YVQ + + +++ M + +V +E
Sbjct: 248 DMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEK 307
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+ +SAC +G + + +V + + V LI ++KCG L+ A F R+
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERL 367
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
+ K+V ++++MI FA HG + A+D+F M + + PN+VTFI VL+AC+HGGLVE+G
Sbjct: 368 REKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGR 427
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
+ F M F ++P +H CMVDL GR G LE+A +LI WGAL G+C +
Sbjct: 428 RLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLI 487
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H + ELG+ AA +++L P +G LLAN+Y+ W D V+ + + + KSPGCS
Sbjct: 488 HKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCS 547
Query: 487 WI 488
WI
Sbjct: 548 WI 549
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 253/503 (50%), Gaps = 69/503 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM---HRLGVLTSGFTFS 107
+L AR+ FD++ K KT W +LI + + R ++ +Y M G+ TFS
Sbjct: 109 DLELARKTFDEMGK-KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFS 167
Query: 108 SVLNACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAER 146
S L AC+ V + + A+I Y+K G ++ A+++FD + R
Sbjct: 168 SALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR 227
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG-------------- 188
+VI+W+ M++GYA G A E + RM + N VT++ ++
Sbjct: 228 DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIH 287
Query: 189 ---------------------YGKCGE-VREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
Y KC + EA++VF+ + D W + V YVQ G A
Sbjct: 288 RKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQA 347
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
K A++++K M+ ENV +E+ + +SAC LG + + G C + N+L
Sbjct: 348 KDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSL 407
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
++M+++CG LD F+ I++K ++S+S++I A+A HG S+ L+ F ++ EG+ +
Sbjct: 408 MNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADD 467
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
VT + L+ACSHGG++++G + F M G+ P H CMVDLL R+G+LE A +LI
Sbjct: 468 VTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIH 527
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS-ALLANIYASMGKWK 465
D DA W +LL CK+H + + A L EL E ++ LL+N+YA G+W
Sbjct: 528 DMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD 587
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D V+ + +K+PGCS+I
Sbjct: 588 D---VRKTRNRRAARKNPGCSYI 607
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 150/296 (50%), Gaps = 39/296 (13%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
WT ++ + H+R+++ Y +M G+ G F + C+ L K
Sbjct: 26 WTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDL---------KQ 76
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G + A L + E ++I +A++ YA C +++ A++ +D M +K VTW A+IAGY
Sbjct: 77 GQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYS 136
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ G+ R A K++ ++ E ++ +
Sbjct: 137 RNGDHRGALKIYQDMVSKSP----------------------------EGMKPDAITFSS 168
Query: 251 AISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
A+ AC+ +GD+ I A+ V G + V NALI+M+SKCG L+ A + F R+KN+
Sbjct: 169 ALYACSVVGDISQGREIEARTVASGYASDS-IVQNALINMYSKCGSLESARKVFDRLKNR 227
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
DVI++++MI+ +A G + +AL++F +M +PN VTFIG+LTAC++ +E G
Sbjct: 228 DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQG 283
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
YGKCG V +A VF I P++ W + + +NG+ + A+ Y+ M E +R
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIK 307
V AI C+ D++ +L + E + + ALI M+++C L+LA + F +
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRN---EGIEPNQVTFIGVLTACSHGGLVED 364
K +++++++I ++ +G + AL ++ M + EG++P+ +TF L ACS G +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G ++ E T G + ++++ + G LE A + K+ D W ++
Sbjct: 182 G-REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR-DVIAWNTMI 236
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 33/151 (21%)
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG + A F I++ + +S++ ++ AFA +G +EAL + +M EG+ P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 349 FIGVLTACS-----------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
F+ + CS H ++E +F++ + G T ++ + R
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDI---ILG--------TALITMYARCRD 109
Query: 398 LEKAHSLIMDYKDFCDAG-----TWGALLGA 423
LE A K F + G TW AL+
Sbjct: 110 LELAR------KTFDEMGKKTLVTWNALIAG 134
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 260/479 (54%), Gaps = 17/479 (3%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
K ++ +H + +KT T Q + A L+R+ + + +A ++F + + +L
Sbjct: 38 KNPKHVQSIHCHAIKTRTS---QDPFVAFELLRVY-CKVNYIDHAIKLF-RCTQNPNVYL 92
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
+TSLI V + +I L+ +M R VL + +++L AC L A+ G
Sbjct: 93 YTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACV----LQRALGSGKEVH 148
Query: 131 GLMDDAQRLFD-SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
GL+ + D S+A + +V Y CG ++ A++ +D M E++ V MI
Sbjct: 149 GLVLKSGLGLDRSIALK-------LVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSC 201
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
CG V EA +VF+E+ D CW + V+NG +E+++ M+ + V +EV V
Sbjct: 202 FDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFV 261
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+SAC QLG +E+ + ++ + + +V+ ALI+M+S+CG +D A F ++ K
Sbjct: 262 CVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVK 321
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
DV +Y+SMI A HGKS EA+++F +M E + PN +TF+GVL ACSHGGLV+ G + F
Sbjct: 322 DVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIF 381
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
E M + GI+P EH CMVD+LGR G+LE+A I D +LL ACK+H N
Sbjct: 382 ESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKN 441
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+GE A+ L E +G+ +L+N YAS+G+W + V+ + + K PGCS I
Sbjct: 442 IGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSI 500
>gi|115479089|ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51091564|dbj|BAD36301.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631371|dbj|BAF25052.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|215740507|dbj|BAG97163.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 612
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 228/406 (56%), Gaps = 20/406 (4%)
Query: 105 TFSSVLNACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERN 147
T++++L AC R+ L A ++ GY G + A+ LFD MA R+
Sbjct: 159 TWNTLLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDLAGARNLFDGMARRD 218
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
V++W++M++GY+ G+M+ A++ +D M E++ V+W +M+ GY + G+V A+ VFD + +
Sbjct: 219 VVTWNSMISGYSRHGDMENARKMFDAMPERDVVSWNSMLDGYAQAGDVEMARLVFDGMPK 278
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAI 266
W + Y + + + ++ VM E N +E V ++AC LGD+E
Sbjct: 279 RSIVSWNVILALYAKLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEKGRW 338
Query: 267 LAKHVDEGCCDRTNYVSNALIH--MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ V E V M++KCG ++ A F+ + K V S++SMI + H
Sbjct: 339 VHDLVQERWDRLVPDVLLLTTLLTMYAKCGVMETAREIFNSMGEKSVPSWNSMIIGYGLH 398
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
G+S++AL++FL+M +G PN+ TFI VL++C+HGGLV +G F+ M R + I+P +EH
Sbjct: 399 GQSEKALELFLEMERDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPKSEH 458
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
CM+DLLGR+G LE++ +LI + + WG L+ A + N +LGE + L+E+
Sbjct: 459 FGCMMDLLGRAGLLEQSENLIENLQGKVSEALWGILMSASQTQNNIKLGEFVGKKLIEMR 518
Query: 445 PEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
P + G LL+NIYA+ G+W D E V+ ++ E +K G S + S
Sbjct: 519 PTEVGPYILLSNIYAAEGRWDDVEKVRKVMEEKGVEKDAGLSLVGS 564
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 40/231 (17%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A+RL + + ++W+ ++ G + AA+ +D M E++ V++ +M+AGY G++
Sbjct: 145 ARRLLADIPRPDAVTWNTLLRACLRLGLLPAARRLFDEMPERDVVSYNSMVAGYVAEGDL 204
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A+ +FD ++ D W +M Y ++G + A +M+ M + +V V+ +
Sbjct: 205 AGARNLFDGMARRDVVTWNSMISGYSRHGDMENARKMFDAMPERDV----VSWNSMLDGY 260
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
Q GDVEMA ++ F + + ++S++
Sbjct: 261 AQAGDVEMARLV-----------------------------------FDGMPKRSIVSWN 285
Query: 316 SMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDG 365
++ +A +E L +F M EG PN+ TF+ VLTAC++ G +E G
Sbjct: 286 VILALYAKLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEKG 336
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 262/493 (53%), Gaps = 19/493 (3%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN---LSYARQV 58
T L+ + + +QLKQ+H+ LL++ H +A + L +N S+A +
Sbjct: 13 TLNSLLKKCRALSQLKQIHANLLQS----HLPESPFAIGQLLSLAATSNNPSFFSHACLI 68
Query: 59 FDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
F + + F++ S+IR +VL ++IL Y M G+L + +TF ++ AC + S
Sbjct: 69 FQNL-SLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGS 127
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
IG + A + E + SA++ Y+ +M A+ +DR+ ++
Sbjct: 128 -------SSKLIGCLVHAHVVTFGFDEDPFVV-SALIEFYSLNFDMGTARTLFDRIPNRD 179
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
V W AMI GYGK G+V A+ +F+++ E +A W+A+ Y + G K + +++ M++
Sbjct: 180 VVLWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQE 239
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+E +V ++AC LG + + + + D ++ AL+ M+SKCG ++
Sbjct: 240 AGTMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVES 299
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A F I NKD ++++MI+ A +G + ++L++F KM + G +P + TF+ VLTAC+H
Sbjct: 300 ALSTFQGIPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTH 359
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI---MDYKDFCDAG 415
LV++G K FE M+ +G++P EH C+VDL+ R+G L +A I M DA
Sbjct: 360 ARLVKEGLKLFEQMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDAN 419
Query: 416 TWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMIS 475
WGA+LGAC+ + N E+G + L ++G G L N+Y G +++ V+ +IS
Sbjct: 420 VWGAMLGACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLIS 479
Query: 476 ETEKKKSPGCSWI 488
E KK PGCS I
Sbjct: 480 EAGMKKKPGCSII 492
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/537 (29%), Positives = 264/537 (49%), Gaps = 67/537 (12%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
TF+ L Q S L+ + H FL LL+ +L Y +FD++ FLW
Sbjct: 20 TFDHLNQTTSILITSGLAHH------TFFLSDLLRSATKDLGYTLLLFDRLAT-PYIFLW 72
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS------------- 118
+++R+ + + ++ Y+++ GV+ TF +L A +++ +
Sbjct: 73 NTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQFYAHIVKF 132
Query: 119 -------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+ +++ + G +D ++RLF A+++V+SW+A++ G G A E +
Sbjct: 133 GLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECF 192
Query: 172 DRM----TEKNSVT------------------WV------------------AMIAGYGK 191
M E + VT WV A++ Y K
Sbjct: 193 VEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSK 252
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG +A KVF+E+ + W A+ YVQ K A+++++ M E + ++ + A
Sbjct: 253 CGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSA 312
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
++AC QLG ++ L ++VD + + AL+ M+SKCG +D A F ++ KDV
Sbjct: 313 LTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDV 372
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+++MI A G + +L++F +M ++PN VTF+GVL+AC+HGGLV++G + F L
Sbjct: 373 YPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRL 432
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
M + ++P +H CMVDLLGR+G+LE+A I G WGAL C +H E
Sbjct: 433 MICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFE 492
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LGE HL++L P +G LLAN+Y+ KW+ + V+ ++ KSP CSWI
Sbjct: 493 LGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWI 549
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 241/435 (55%), Gaps = 23/435 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +F+Q+P+ K WT++++++V + ++ L+ +M + + + S +NA
Sbjct: 194 ARDIFNQMPE-KNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNLYSWNIMISGCINA-- 250
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+++A +LF+SM +RN +SW+ +V G A G M+ A++++D M
Sbjct: 251 ----------------NRLNEAIQLFNSMPQRNEVSWTTLVTGLARNGMMELARKYFDHM 294
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
K+ W AMI Y G + EA +F+ + E + W A+ Y +NG ++
Sbjct: 295 PTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLI 354
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
+M + N + +E + ++AC + ++ A L H+ ++ ++N L+ +S+CG
Sbjct: 355 LMLRSNFKPNETTITSVLTACDSILELMQAHGLVIHLG---FEQDKVLANGLVTTYSRCG 411
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A F +++ KD++S+++MI A+++HG AL +F +M G +P+ +TF+G+L+
Sbjct: 412 DVLSARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLS 471
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF-CD 413
ACSH GLV+ G F+ M+ +G++P EH +C+VD+LGR+G++ KA ++ + CD
Sbjct: 472 ACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHECD 531
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
GALLGAC++H + L L+E P +G+ LLAN YA+ GKW + V+
Sbjct: 532 GAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACGKWNEFAEVRKE 591
Query: 474 ISETEKKKSPGCSWI 488
+ E KK PG S I
Sbjct: 592 MKERNVKKEPGFSQI 606
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 173/352 (49%), Gaps = 32/352 (9%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD++P+ + + S+I ++ + Q+ +L+ ++ V+
Sbjct: 70 ARKVFDEMPR-RDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADS----------- 117
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
A+I GY + G +D A+++FD M ERNV SW+++V+GY GN+ A +++M
Sbjct: 118 -------AMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQM 170
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
EKN V+W + GY + G + EA+ +F+++ E + W AM YV+N A E++
Sbjct: 171 PEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFY 230
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M Q N+ + + G I+A +L + A + R L+ ++ G
Sbjct: 231 QMPQRNLYSWNIMISGCINA-NRLNE-------AIQLFNSMPQRNEVSWTTLVTGLARNG 282
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
++LA + F + KD+ ++++MITA+ D G EA ++F N E N V++ ++
Sbjct: 283 MMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLF----NLMPEKNIVSWNALID 338
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+ G + + LM R KP +T ++ +L +AH L++
Sbjct: 339 GYARNGPESNSLRYLILMLRS-NFKPNETTITSVLTACDSILELMQAHGLVI 389
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 147/319 (46%), Gaps = 55/319 (17%)
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G + +A+++FD M R+ +S+++M+ Y ++ A+ + + E+N V AMI+GY
Sbjct: 65 GKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYV 124
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ G + +A++VFD++ E + W ++ Y + G A+ ++ M ++NV A+VG
Sbjct: 125 RAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDEAMRLFNQMPEKNVVSWTTAVVG 184
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+++ G++D A F+++ K+
Sbjct: 185 ---------------------------------------YAQNGFIDEARDIFNQMPEKN 205
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+I++++M+ ++ ++ + EA ++F +M N ++ +++ C + + + + F
Sbjct: 206 IIAWTAMVKSYVENDEIDEAFELFYQMPQR----NLYSWNIMISGCINANRLNEAIQLFN 261
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
M + + T +V L R+G +E A D+ D W A++ A
Sbjct: 262 SMPQRNEVS-----WTTLVTGLARNGMMELARKYF-DHMPTKDIAAWNAMITAY-----V 310
Query: 431 ELGEIA-ARHLLELGPEKT 448
+ G +A A +L L PEK
Sbjct: 311 DQGSMAEASNLFNLMPEKN 329
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/507 (30%), Positives = 254/507 (50%), Gaps = 59/507 (11%)
Query: 37 YAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR 96
+ +FL+ + + YAR++FDQ P + FL S+I+ ++ H+ S Y + +
Sbjct: 13 FTKFLV--ISASAVGIGYARKLFDQRPHREDSFLCNSMIKAYLETRHYNDSFAFYRDLRK 70
Query: 97 LGVLT-SGFTFSSVLNACA----------------------------------------- 114
L FTF+++ +C
Sbjct: 71 ETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKMG 130
Query: 115 -------RVPSLLE----AVICGYTKIGLMDDAQRLFDSMAE-RNVISWSAMVAGYANCG 162
+P E A+ICGY + G +D A +LFD M + ++V+ ++AM+ G+ G
Sbjct: 131 CARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNAMMDGFVKSG 190
Query: 163 NMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
+M +A+ +D MT K +TW MI GY ++ A+K+FD + E + W M Y Q
Sbjct: 191 DMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQ 250
Query: 223 NGYAKAAIEMYKVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
N + AI +++ M+ ++ +V ++ + A + G + + V D+
Sbjct: 251 NKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKNLDKKVK 310
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V A++ M+SKCG ++ A R F + K V S+++MI +A +G + ALD+FL M E
Sbjct: 311 VCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAALDLFLTMAKEE 370
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
+P+++T + V++AC+HGGLVE+G K F++M R FG+ EH CMVDLLGR+G L++A
Sbjct: 371 -KPDEITMLAVISACNHGGLVEEGRKWFQMM-RKFGLNAKIEHYGCMVDLLGRAGNLKQA 428
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
LI + + + L AC + + E E + +EL P+ GN LL N+YA+
Sbjct: 429 EHLITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAAD 488
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
+W D +VK M+ + E KK GCS I
Sbjct: 489 KRWDDFGMVKNMMRKNEAKKEVGCSLI 515
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 246/494 (49%), Gaps = 61/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
R+VF ++P + WT++I V + +++++ +++M R V +TF+ L ACA
Sbjct: 170 GRRVFHEMP-MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACA 228
Query: 115 RVPSL-------LEAVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSA 153
+L +A+ G Y K G ++ LF+ M+ R+V+SW+
Sbjct: 229 DSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTT 288
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG--------------------- 188
++ G + A + + RM E N T+ A+I+G
Sbjct: 289 IITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLG 348
Query: 189 --------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y KCG++ + +F E++ D W+ + Y Q G+ A E+
Sbjct: 349 LAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLS 408
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
MR E + +E A+ +SAC + +E L +V + T V +ALI+M+ KCG
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCG 468
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
++ A R F +N D++S+++MI +A+HG S+E +D+F K+ G+ P+ VTFIGVL+
Sbjct: 469 SIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLS 528
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV+ G + F M++ + I P EH CM+DLL R+G+L A +I D
Sbjct: 529 ACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDD 588
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
W LL AC+VH + E G A +L+L P G LANIYAS GKW+++ ++ ++
Sbjct: 589 VVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLM 648
Query: 475 SETEKKKSPGCSWI 488
K PG SWI
Sbjct: 649 KSKGVIKEPGWSWI 662
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 203/476 (42%), Gaps = 76/476 (15%)
Query: 24 LKTLTKPHDQYHYYAQFLIRLLQLPGDN-----------LSYARQVFDQIPKCKTQFLWT 72
L+ L + +D F I LP N L AR++FD++ + K + WT
Sbjct: 27 LQVLERSNDNLSQNIHF-ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQ-KDEISWT 84
Query: 73 SLIRNHVLHAHFRQSILLYAKM----------------HRLGVLTSGFTFSSVLNACARV 116
+LI +V +++LL+ M H+ L S + +L+ A
Sbjct: 85 TLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVK 144
Query: 117 PSLLEAVICG------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
L+ +V G YTK G + + +R+F M RNV+SW+A++ G G K A +
Sbjct: 145 TGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVY 204
Query: 171 YDRM----TEKNSVTWV---------------------AMIAG--------------YGK 191
+ M E +S T+ AM G Y K
Sbjct: 205 FSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNK 264
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG++ +F+++S D W + VQ G + A++ + MR+ +V +E
Sbjct: 265 CGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAV 324
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
IS C L +E L + + V N+++ M++KCG L + F + +D+
Sbjct: 325 ISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDI 384
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S+S++I ++ G EA ++ MR EG +P + VL+AC + ++E G KQ
Sbjct: 385 VSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHG-KQLHA 443
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
G++ L+ ++++ + G +E+A S I D + D +W A++ H
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEA-SRIFDAAENDDIVSWTAMINGYAEH 498
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/491 (31%), Positives = 263/491 (53%), Gaps = 25/491 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLP-GDNLSYARQVFDQIPK 64
L+ + K N LKQ H+ + T D + L+ P +L+YA +VF++I
Sbjct: 11 LLEKCKNVNHLKQAHA---QVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRVFERIHH 67
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-LEAV 123
T + ++I+ +++ +F + ++ KM G+ +T VL ACA + L +
Sbjct: 68 -PTLCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALRDCSLGKM 126
Query: 124 ICGYT-KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
+ GY+ K+GL+ D + ++++A Y+ CG++ AA+ +D M ++V+W
Sbjct: 127 VHGYSSKLGLVFD------------IFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSW 174
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
MI+GY K G+V A+ FDE E D W AM YVQN K + ++++++ +V
Sbjct: 175 SVMISGYAKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVV 234
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
E V +SAC LG +++ + ++++ + +S +L+ M++KCG L+LA R
Sbjct: 235 PDESIFVSILSACAHLGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRL 294
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + +D++ +++MI+ A HG AL MF +M GI+P+ +TFI V TACS+ G+
Sbjct: 295 FDSMPERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMA 354
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT-----W 417
+G + + M+ ++ I+P +EH C+VDLL R+G +A +I G+ W
Sbjct: 355 HEGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAW 414
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
A L AC H A+L E AA+ LL L +G LL+N+YA+ GK D+ V+ M+
Sbjct: 415 RAFLSACCNHGQAQLAERAAKRLLRL-ENHSGVYVLLSNLYAASGKHSDARRVRNMMRNK 473
Query: 478 EKKKSPGCSWI 488
K+PGCS +
Sbjct: 474 GVDKAPGCSSV 484
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 261/546 (47%), Gaps = 73/546 (13%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQI-------PK 64
+ LK +HS L H H+ A+ +I +L GD L AR +FD +
Sbjct: 37 SLTTLKLIHSSLSTRGFLLHTP-HFLARLIILYSKL-GD-LHSARTLFDHRHHHHHGHTQ 93
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA-RVPSLLEAV 123
FL +++R + ++I LY M R+GV + FT+ VL CA + ++ V
Sbjct: 94 APNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEV 153
Query: 124 ICG--------------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
+ G Y K G + DA +FD M R+V+ W+AM+ Y
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAER 213
Query: 164 MKAAKEFYDRMTEKN-------------------------SVTWVAMIAG---------- 188
A + +M E+ SV A++ G
Sbjct: 214 PLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNS 273
Query: 189 ----YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
Y KCG V A+ VFD + E + W +M Y QNG A+ ++ M+ +
Sbjct: 274 IVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPN 333
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
V + +SAC+ LG + L V D + NA++ M+ KCG LD A F+
Sbjct: 334 PVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFN 393
Query: 305 --RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
+ +DV S++ +I+ + HG +EAL++F +M+ EG+EPN +TF +L+ACSH GL+
Sbjct: 394 NCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLI 453
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
++G K F MT++ ++P +H CMVD+LGR+G L +A LI WGALL
Sbjct: 454 DEGRKCFADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLL 512
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H N ELGEIAA +L +L PE TG L++NIYA+ KWK+ E+V+ + KK
Sbjct: 513 ACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKP 572
Query: 483 PGCSWI 488
S I
Sbjct: 573 AAFSVI 578
>gi|115461705|ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group]
gi|45680436|gb|AAS75237.1| unknown protein [Oryza sativa Japonica Group]
gi|113578003|dbj|BAF16366.1| Os05g0112900 [Oryza sativa Japonica Group]
gi|215715346|dbj|BAG95097.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736909|dbj|BAG95838.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629956|gb|EEE62088.1| hypothetical protein OsJ_16872 [Oryza sativa Japonica Group]
Length = 661
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 238/448 (53%), Gaps = 18/448 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-SGFTFSSVLNAC 113
AR++FD +P + F WT++++ + + R++ ++ KM V+ + + V N C
Sbjct: 173 ARRLFDLMPY-RNVFSWTTMVQGYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDNGC 231
Query: 114 A--------RVPSL----LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
R+P + A+ G G +DDA +LFD M +NV+SW+ MV G A
Sbjct: 232 IQEALELFNRMPQMNSYSWNAMATGLMSAGKVDDAVQLFDKMPHKNVVSWTIMVTGLAQN 291
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
G + A+EF+DRM +K+ W +MI Y G+V +A+++FD + + W + Y
Sbjct: 292 GFVSRAREFFDRMPKKDIPAWNSMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYS 351
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
N A+ ++ +M + V ++ + +V L+ + G TN
Sbjct: 352 MNNLKDEALRLFLLMLRSAVSPDSTTLISVLVVSESTMEVRQIHGLSTKL--GYQPETN- 408
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
+ N L+ M+S+ G L AW F R+ KD I+++SMI A A+HG + AL F +M G
Sbjct: 409 LGNTLVSMYSRSGDLSSAWLAFRRLNEKDAITWTSMIQALANHGCAPCALQGFAQMLRCG 468
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
+P+ TF VL+AC+H GLVE G K F+ ++ V+G+ P EH +C+VDLLGR+G + +A
Sbjct: 469 YKPSSTTFTAVLSACNHVGLVEKGRKIFKSISHVYGLGPTIEHYSCLVDLLGRAGYVREA 528
Query: 402 HSLIMDY-KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
++ +D CD G LLG+C H E+G L+++ P +G LLAN++AS
Sbjct: 529 KEVVDGMQRDMCDEAILGTLLGSCMTHNEVEVGRAVGEDLVKIDPSGSGGYTLLANVFAS 588
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
G W + V ++ ++ KK+PG S I
Sbjct: 589 GGMWNEVASVWKIMKGSKVKKTPGFSQI 616
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 162/364 (44%), Gaps = 48/364 (13%)
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
GY K G +D A+RLFD MA +NV++W+ MV+GY G + A+ +D M +N +W M
Sbjct: 132 GYVKAGQVDRARRLFDGMAVKNVVAWTCMVSGYCRAGLVDEARRLFDLMPYRNVFSWTTM 191
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
+ GY G +REA+++FD++ E + W M YV NG + A+E++ M Q N
Sbjct: 192 VQGYAHNGMLREAREMFDKMPERNVVAWTVMVKAYVDNGCIQEALELFNRMPQMNSYSWN 251
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFS 304
G +SA G V+ A L + N VS ++ ++ G++ A F
Sbjct: 252 AMATGLMSA----GKVDDAVQLFDKMPH-----KNVVSWTIMVTGLAQNGFVSRAREFFD 302
Query: 305 RIKNKDVISYSSMITAFADHGK-------------------------------SQEALDM 333
R+ KD+ +++SMITA+ + G+ EAL +
Sbjct: 303 RMPKKDIPAWNSMITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRL 362
Query: 334 FLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
FL M + P+ T I VL V +Q ++ G +P T +V +
Sbjct: 363 FLLMLRSAVSPDSTTLISVLVVSESTMEV----RQIHGLSTKLGYQPETNLGNTLVSMYS 418
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG--PEKTGNS 451
RSG L A L + DA TW +++ A H A +L G P T +
Sbjct: 419 RSGDLSSAW-LAFRRLNEKDAITWTSMIQALANHGCAPCALQGFAQMLRCGYKPSSTTFT 477
Query: 452 ALLA 455
A+L+
Sbjct: 478 AVLS 481
>gi|297846398|ref|XP_002891080.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336922|gb|EFH67339.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 253/493 (51%), Gaps = 66/493 (13%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYY-AQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
TF+Q+KQ+ S+ L T H Q + ++ L R P +LS+A ++F IPK T
Sbjct: 15 TFSQIKQLQSHFL---TAGHFQSSFLRSRLLERCAISPFGDLSFAVKIFRHIPKPLTND- 70
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMH---------RLGVLTSGFTFSSVLNACARV--PSL 119
W ++IR +H + Y M R+ LT FT L ACAR S
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQRSSSSALCRVDALTCSFT----LKACARALCSSA 126
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
+ + C ++ G DA
Sbjct: 127 MVQIHCQISRRGFSADA------------------------------------------- 143
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+ ++ Y K G++ A K+FDE+S D + W A+ V A A+E+YK M E
Sbjct: 144 LLCTTLLDAYSKNGDLISALKLFDEMSVRDVASWNALIAGLVAGNRASEALELYKRMEME 203
Query: 240 NVRISEVAMVGAISACTQLGDV-EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+R SEV +V A+ AC+ LGDV E IL ++ + D VSNA+I M+SKCG++D
Sbjct: 204 GIRRSEVTVVAALGACSHLGDVKEGEKILHGYIKDEKLDHNVIVSNAVIDMYSKCGFVDK 263
Query: 299 AWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A++ F + K V+++++MIT F+ HG++ AL++F K+ + GI+P+ V+++ LTAC
Sbjct: 264 AFQVFEQFTGKKSVVTWNTMITGFSVHGEAHRALEIFEKLEHNGIKPDDVSYLAALTACR 323
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
H GLVE G F M G++P +H C+VDLL R+G+L +AH +I D W
Sbjct: 324 HTGLVEYGISIFNNMA-CNGVEPNMKHYGCVVDLLSRAGRLREAHDIICSMSMVPDPVLW 382
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
+LLGA ++H N E+ EIA+R + E+G G+ LL+N+YA+ G+WKD +V+ +
Sbjct: 383 QSLLGASEIHNNVEMAEIASRKIKEMGVNNDGDFVLLSNVYAAQGRWKDVGLVRDDMESK 442
Query: 478 EKKKSPGCSWISS 490
+ KK PG S+I +
Sbjct: 443 QVKKVPGISYIEA 455
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 250/504 (49%), Gaps = 71/504 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLH-AHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
L A++VFD++ K + W S+I LH + + L +M V + T VL
Sbjct: 170 LDDAKEVFDKMHK-RDVVAWNSMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVL 227
Query: 111 NACARVPSLLEA---------------VICG------YTKIGLMDDAQRLFDSMA-ERNV 148
A A+V SL V+ G Y K +D A+R+FD M +N
Sbjct: 228 PAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNE 287
Query: 149 ISWSAMVAGYANCGNMKAAKEFY-------DRMTEKNSVTWVAMI--------------- 186
++WSAMV Y C M+ A E + D + ++VT +I
Sbjct: 288 VTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCL 347
Query: 187 --------------------AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
+ Y KCG + A + F+E+ DA + A+ YVQNG +
Sbjct: 348 HCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNS 407
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT--NYVSN 284
+ + M+ M+ + + + + AC L + + H C T + N
Sbjct: 408 EEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGS--CSHCYAIICGFTADTMICN 465
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
ALI M++KCG +D A + F R+ + ++S+++MI A+ HG EAL +F M++EG++P
Sbjct: 466 ALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKP 525
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
+ VTFI +++ACSH GLV +G F MT+ FGI P EH CMVDLL R+G ++ HS
Sbjct: 526 DDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSF 585
Query: 405 IMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKW 464
I D WGALL AC+V+ N ELGE ++ + +LGPE TGN LL+N+Y+++G+W
Sbjct: 586 IEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRW 645
Query: 465 KDSEIVKMMISETEKKKSPGCSWI 488
D+ V+ E +KSPGCSWI
Sbjct: 646 DDAAQVRFTQKEQGFEKSPGCSWI 669
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 222/489 (45%), Gaps = 74/489 (15%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHD----QYHYYAQFLIRLLQLPGDNLSYARQVFDQIP- 63
+SK+ + K +H +LLK L + H+ + + L+ L + L AR VFD++P
Sbjct: 21 QSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLY-IACSELKIARHVFDKMPH 79
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-- 121
+ K LW LIR + + + ++I LY KM G+ + FTF VL AC+ + E
Sbjct: 80 RPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGR 139
Query: 122 -------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY---- 158
A++ Y K G +DDA+ +FD M +R+V++W++M++G+
Sbjct: 140 EIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHE 199
Query: 159 -------------------------------ANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
A +++ KE + + V V +
Sbjct: 200 GSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGT 259
Query: 188 G----YGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMY---KVMRQE 239
G YGKC + A+++FD + + W+AM YV + + A+E++ +++ +
Sbjct: 260 GILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDD 319
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ +S V + I C L D+ L + + V N L+ M++KCG ++ A
Sbjct: 320 VIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGA 379
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH- 358
R F+ + +D +S++++I+ + +G S+E L MFL+M+ GI P + T VL AC+H
Sbjct: 380 MRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHL 439
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL C + + G T ++D+ + G+++ A + D +W
Sbjct: 440 AGLHYGSCSHCYAI--ICGFTADTMICNALIDMYAKCGKIDTARK-VFDRMHKRGIVSWN 496
Query: 419 ALLGACKVH 427
++ A +H
Sbjct: 497 TMIIAYGIH 505
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 249/454 (54%), Gaps = 30/454 (6%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM----HRLGVLTSGFTFS 107
+++A VFDQIP+ +F++ +LIR A R ++ LY +M GV TF
Sbjct: 28 IAHAYLVFDQIPR-PDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFP 86
Query: 108 SVLNACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAER 146
VL AC + + + A+I + G + A LFD A
Sbjct: 87 FVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRARE 146
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
+ ++WSAM+ G A G++ AA++ +D K+ V+W MI Y K G++ A+++FD++
Sbjct: 147 DAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVP 206
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
E D W M YV+ G A+E+++ M++ + V M+ +SAC GD+++
Sbjct: 207 ERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQR 266
Query: 267 LAKHVDEGCCDRTNY---VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
L + + R + + NALI M++KCG + A F +++KDV +++S++ A
Sbjct: 267 LHSSLSD-MFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLAL 325
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
HG E++DMF KM + P+++TF+ VL ACSHGG+V+ G + F LM + ++P +
Sbjct: 326 HGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIK 385
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
H CMVD+LGR+G L++A I K ++ W LL AC+VH EL + A R LL+
Sbjct: 386 HYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKA 445
Query: 444 GPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
+++G+ LL+NIYAS+G+W SE ++ ++ ++
Sbjct: 446 RNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDS 479
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 130/319 (40%), Gaps = 85/319 (26%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ AR++FDQ+P+ + W +I +V ++ L+ +M R+G T S+L
Sbjct: 194 DMALARELFDQVPE-RDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLL 252
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE---RN---VISWSAMVAGYANCGNM 164
+ACA G +D QRL S+++ RN V+ +A++ YA CG+M
Sbjct: 253 SACA--------------DSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSM 298
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
K+A E + M +K+ TW +++ G G V E
Sbjct: 299 KSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLE--------------------------- 331
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN 284
+I+M++ M + VR E+ V + AC+ G V D+ N
Sbjct: 332 ----SIDMFEKMLKGKVRPDEITFVAVLIACSHGGMV---------------DKGREFFN 372
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
+ H +R IK+ Y M+ G +EA + M+ EP
Sbjct: 373 LMQH----------KYRVEPNIKH-----YGCMVDMLGRAGLLKEAFEFIDTMK---CEP 414
Query: 345 NQVTFIGVLTACSHGGLVE 363
N V + +L+AC G +E
Sbjct: 415 NSVIWRTLLSACRVHGEIE 433
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 40/282 (14%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM----RQENVRISEVAM 248
G + A VFD+I PD + + + A+ +Y M VR ++
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL---------- 298
+ ACT +G + + HV + C+ +V NALI MH+ CG L +
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 299 ----AWRE-----------------FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
AW F KD++S++ MITA+A G A ++F ++
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ V G + SH +E FE M R+ G KP + ++ SG
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALE----LFEQMQRM-GEKPDIVTMLSLLSACADSGD 260
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
L+ L D + +LG + + A+ G + + H
Sbjct: 261 LDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAH 302
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 224/411 (54%), Gaps = 46/411 (11%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAE-------------RNVISWSAMVAGYANCGNMKAAKE 169
+I GY + G +++A+RLFD + + RNV+SW++M+ Y G++ +A+E
Sbjct: 237 LIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVSARE 296
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA--- 226
+DRM E+++ +W MI+GY + + EA K+F E+ PD W + + Q G
Sbjct: 297 LFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPDVLSWNLIVSGFAQKGDLNLA 356
Query: 227 ----------------------------KAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
K AI+++ M+ E R + +S CT L
Sbjct: 357 KDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCTGL 416
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK-NKDVISYSSM 317
++ + + + V + + ++N+LI M+S+CG + A F+ IK KDVI++++M
Sbjct: 417 VNLYLGKQIHQLVTKIVIPDSP-INNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAM 475
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I +A HG + EAL++F M+ I P +TFI V+ AC+H GLVE+G +QF+ M +G
Sbjct: 476 IGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGLVEEGRRQFKSMINDYG 535
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I+ EH +VD+LGR GQL++A LI D WGALL AC+VH N EL +AA
Sbjct: 536 IERRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLSACRVHNNVELALVAA 595
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+ L PE + LL NIYA++G+W D+E V++++ E KK G SW+
Sbjct: 596 DALIRLEPESSAPYVLLYNIYANLGQWDDAESVRVLMEEKNVKKQAGYSWV 646
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 205/441 (46%), Gaps = 78/441 (17%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-----SGF-- 104
LS AR +FD + K + W S+I +V ++ L+ +M R V++ SG+
Sbjct: 55 LSEARALFDSM-KHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVVSWNLIVSGYFS 113
Query: 105 -TFSSVLNACARVPSLL--------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
S + R+ L+ VI GY K G MD A +LF++M ERN +S +A++
Sbjct: 114 CRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNALI 173
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVA------------------------------- 184
G+ G++ +A +F+ M E S + A
Sbjct: 174 TGFLLNGDVDSAVDFFRTMPEHYSTSLSALISGLVRNGELDMAAGILCECGNGDDDLVHA 233
Query: 185 ---MIAGYGKCGEVREAKKVFDEISEP-------------DASCWAAMTVCYVQNGYAKA 228
+IAGYG+ G V EA+++FD I + + W +M +CYV+ G +
Sbjct: 234 YNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVS 293
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A E++ M +++ + IS Q+ ++E A+ L + + D ++ N ++
Sbjct: 294 ARELFDRMVEQDT----CSWNTMISGYVQISNMEEASKLFREMP--IPDVLSW--NLIVS 345
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
++ G L+LA F R+ K++IS++S+I + + + A+ +F +M+ EG P++ T
Sbjct: 346 GFAQKGDLNLAKDFFERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHT 405
Query: 349 FIGVLTACSHGGLVE--DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
V++ C+ GLV G + +L+T++ + P + ++ + R G + A ++
Sbjct: 406 LSSVMSVCT--GLVNLYLGKQIHQLVTKI--VIPDSPINNSLITMYSRCGAIVDACTVFN 461
Query: 407 DYKDFCDAGTWGALLGACKVH 427
+ K + D TW A++G H
Sbjct: 462 EIKLYKDVITWNAMIGGYASH 482
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
I + G + +A+ LFDSM R+ ++W++M+ GY + + A++ +D M ++ V+W
Sbjct: 46 ISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVVSWN 105
Query: 184 AMIAGYGKCGEVR---EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+++GY C R E +++F+ + + D W + Y +NG A++++ M + N
Sbjct: 106 LIVSGYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERN 165
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
S + G + GDV+ A + + E +ALI + G LD+A
Sbjct: 166 AVSSNALITGFLLN----GDVDSAVDFFRTMPEHYSTSL----SALISGLVRNGELDMAA 217
Query: 301 REFSRIKNKD---VISYSSMITAFADHGKSQEALDMF 334
N D V +Y+++I + G +EA +F
Sbjct: 218 GILCECGNGDDDLVHAYNTLIAGYGQRGHVEEARRLF 254
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 42/184 (22%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
VF++I K W ++I + H +++ L+ M RL + + TF SV+NACA
Sbjct: 459 VFNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHA- 517
Query: 118 SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
GL+++ +R F SM D E+
Sbjct: 518 -------------GLVEEGRRQFKSMIN--------------------------DYGIER 538
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAA-MTVCYVQNGYAKAAIEMYKV 235
+ +++ G+ G+++EA + + + +PD + W A ++ C V N A + +
Sbjct: 539 RVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLSACRVHNNVELALVAADAL 598
Query: 236 MRQE 239
+R E
Sbjct: 599 IRLE 602
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 248/480 (51%), Gaps = 64/480 (13%)
Query: 48 PGDNLSYARQVFDQIPK---CKTQFLWTSLIRNHVLHAHF-RQSILLYAKMHRLGVLTSG 103
P L++A F I + +F + SL+++ A F R ++A+ R G+L
Sbjct: 57 PSPRLAFA--AFSSILRSGDTPDRFTFPSLLKSASRLASFPRTGAQVHAQAVRRGLLVDV 114
Query: 104 FTFSSVL----------------NACARVPSLL--EAVICGYTKIGLMDDAQRLFDSMAE 145
F +++L ++CA V L+ ++ GY K G + +A+R+F+ M +
Sbjct: 115 FVVNTLLAMYAAFRDTRSMREVFDSCAGVADLVTWNTMLGGYVKCGEIGEARRVFEQMPQ 174
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTE----------------------------- 176
RN +SWSAMV YA G + A+E +D M
Sbjct: 175 RNGVSWSAMVGAYAGAGELDVAREMFDEMPAIGRNVVSWNSMITGFARHGLLPLARKMFD 234
Query: 177 ----KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+N V+W M+ GY GE+ +A+++FD + E D W M Y Q +E+
Sbjct: 235 EMPVRNLVSWNTMVRGYAVNGEMNDARELFDRMPEKDVVSWTCMISGYAQARCYTETLEL 294
Query: 233 YKVMRQE-NVRISEVAMVGAISACTQLGDVEMA----AILAKHVDEGCCDRTNYVSNALI 287
++ M+ E NV +EV MV +SAC L +E A + KH + D + ALI
Sbjct: 295 FRAMQSESNVLPNEVTMVSVLSACAHLTALEEGRWAHAFIDKH--KMVLDSEFNLGAALI 352
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+SKCG DLA + F + K+V +++++IT A +G + ++D+F +MR G +PN +
Sbjct: 353 DMYSKCGRTDLAVKIFHSLDQKNVSAWNALITGLAVNGDVRSSIDVFEQMRRSGEKPNGI 412
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+GVLTAC+HGGLV++G + F+ M G++P +H CMVD+LGR+G LE+A LI
Sbjct: 413 TFVGVLTACAHGGLVDEGRRCFQSMASTCGVQPEAKHYGCMVDMLGRAGLLEEAEELIRS 472
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
D GALLGAC++H ++ +L L +++G L+++IYA+ GKW D+
Sbjct: 473 MPMVPDVMILGALLGACRMHKRVDVAARVQNEILGLSTQQSGCHVLISDIYAAAGKWADA 532
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 236/422 (55%), Gaps = 20/422 (4%)
Query: 74 LIRNH-VLHAHFRQSILLYAKMHRL-GVLTSGFTFSSVLNACARVPSLLEA--VICGYTK 129
+I+ H V+ S+ ++ M R+ G L + +TF V AC +LE + K
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 60
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
IGL E N+ +AM+ YAN G + A+ +D +++ +W MI GY
Sbjct: 61 IGL------------ESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGY 108
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
GE+ AK++FDE+SE D W + YVQ G K A++++ M Q +E +
Sbjct: 109 VGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLA 168
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR---I 306
A++AC L ++ + ++D+ + +L+ M++KCG +D A + F +
Sbjct: 169 SALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGL 228
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
K K V +++MI +A HGKS+EA+D+F +M+ E + PN+VTF+ +L ACSHG LVE+G
Sbjct: 229 KLK-VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGR 287
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
F+ M +GI+P EH CMVDLLGRSG L++A + + DA WGALLGAC++
Sbjct: 288 GYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRI 347
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H + E G+ + + EL + G LLAN+Y++ G+W +++ V+ I + +KK+PGCS
Sbjct: 348 HKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCS 407
Query: 487 WI 488
I
Sbjct: 408 SI 409
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 38/255 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ A+++FD++ + + WT++I +V F++++ L+ +M + G + FT +S L
Sbjct: 114 IGRAKEMFDEMSE-RDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALA 172
Query: 112 ACARVPS---------------------LLEAVICGYTKIGLMDDAQRLF--DSMAERNV 148
ACA + + LL +++ Y K G +D A ++F + + V
Sbjct: 173 ACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKV 232
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
W+AM+ GYA G K A + +++M N VT+VA++ V E + F
Sbjct: 233 WPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKS 292
Query: 205 IS-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQL 258
++ EP+ + M ++G K A E M + + GA + AC
Sbjct: 293 MASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMA----PDATIWGALLGACRIH 348
Query: 259 GDVEMAAILAKHVDE 273
D+E + K + E
Sbjct: 349 KDIERGQRIGKIIKE 363
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 175/582 (30%), Positives = 272/582 (46%), Gaps = 104/582 (17%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQ 61
T +L+ + + +LK VH+ ++ L Q + L +Q GD L YA +FDQ
Sbjct: 41 TLHHLLDQCSSMKRLKLVHAQII--LHGLAAQVVTLGKLLSLCVQ-EGD-LRYAHLLFDQ 96
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
IP+ +F++ LIR + +S+LL+ +M G + + FTF VL ACA P E
Sbjct: 97 IPQ-PNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWE 155
Query: 122 AV----------------------------------------------------ICGYTK 129
AV I GY+K
Sbjct: 156 AVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSK 215
Query: 130 IGLMDDAQRLFDSMAERNV---------------------------------------IS 150
+G D+A LF M + V I
Sbjct: 216 MGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIV 275
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
+A++ YA CG+++ AK +D+M +K+ V+W +M+ Y G V A ++F+ + +
Sbjct: 276 TNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNV 335
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W ++ C VQ G A+E++ M V + +V +S C+ GD+ L K
Sbjct: 336 VSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLA----LGKQ 391
Query: 271 VDEGCCDRTNYVS----NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
CD VS N+LI M++KCG L A F + K+V+S++ +I A A HG
Sbjct: 392 AHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGF 451
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+EA++MF M+ G+ P+++TF G+L+ACSH GLV+ G F++M F I P EH
Sbjct: 452 GEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYA 511
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
CMVDLLGR G L +A +LI D WGALLGAC+++ N E+ + + LLELG
Sbjct: 512 CMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRF 571
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+G LL+N+Y+ +W D + ++ ++ ++ KK S+I
Sbjct: 572 NSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFI 613
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 168/578 (29%), Positives = 274/578 (47%), Gaps = 96/578 (16%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQ 61
T YL+ + + QLK VH+ ++ L Q + + +QL +L YA ++FDQ
Sbjct: 38 TLHYLIDQCISLKQLKHVHAQII--LHGLATQVLTLGKLVSSSVQL--RDLRYAHKLFDQ 93
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--- 118
IP+ +F++ LI+ + + +S+LLY +M G+L + FT VL ACA
Sbjct: 94 IPQ-PNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWL 152
Query: 119 ------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
+ A++ Y GL+ A+R+FD ++ER ++SW++M+ GY+
Sbjct: 153 GVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSK 212
Query: 161 CGNMKAAKEFYDRM---------------------------------------TEKNSVT 181
G + A + M E +S+
Sbjct: 213 MGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIV 272
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV----------------------- 218
A++ Y KCG ++ AK VFD++ + D W M
Sbjct: 273 TNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNV 332
Query: 219 --------CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
C+VQ G A++++ M V ++ +V +S+C+ +GD+ + +
Sbjct: 333 VSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSY 392
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ + + + NA+I M++KCG L A F + K+ +S++ +I A A HG +EA
Sbjct: 393 IFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEA 452
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
++MF KM+ G+ P+++TF G+L+ACSH GLV+ G FE+M FGI P EH CMVD
Sbjct: 453 IEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVD 512
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGN 450
LLGR G L +A SLI D W ALLGAC+ + N +G+ + LLELG +G
Sbjct: 513 LLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGL 572
Query: 451 SALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+N+Y+ +W D + + ++ + KK S+I
Sbjct: 573 YVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFI 610
>gi|413917533|gb|AFW57465.1| hypothetical protein ZEAMMB73_932577 [Zea mays]
Length = 677
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/460 (32%), Positives = 255/460 (55%), Gaps = 26/460 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+S AR++F+ +P+ + WTS++R +V +R+ +LL+ M R GV + T S VL+
Sbjct: 212 VSEARRLFEAMPE-RNVVSWTSMVRGYVKCGMYREGLLLFLDMRREGVQVNAITLSVVLD 270
Query: 112 ACARVPSLLEAV---------------------ICGYTKIGLMDDAQRLFDSMAERNVIS 150
CA+ + E + I Y++ G M DA+R+F M +++++S
Sbjct: 271 GCAQASLVGEGIQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVS 330
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
W++++ GY ++ A + M E+++++W +++ G+ G +RE+ ++F+++ D
Sbjct: 331 WNSLITGYVQNNMIEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFEQMPVKDD 390
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W A+ ++ NG + + + M QE R + A +SA L + +
Sbjct: 391 IAWTAVISSFIANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAMLNQGLQAHAY 450
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ V +L+ M++KCG L A R FS I+N +++ +SMI+AFA HG +++A
Sbjct: 451 AVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCIRNPSLVAINSMISAFAQHGLAEDA 510
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
L +F +M+ +G PN VTF+G+LTAC+ GLV+ G FE M V+GI+P +H TCMV+
Sbjct: 511 LKLFNRMQYDGQRPNHVTFLGILTACARAGLVQQGYNYFESMRSVYGIQPNPDHYTCMVN 570
Query: 391 LLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKT 448
LLG +G L++A +I M KD+ DA W ALL + +H N +L ++AA+ LLE+ P T
Sbjct: 571 LLGHAGFLDEALEMINSMPQKDYPDA--WAALLSSSSLHSNLDLAKLAAQRLLEIDPYDT 628
Query: 449 GNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L N+++S G D E+VK+ K PG S I
Sbjct: 629 TAYRVLTNMFSSAGLKGDEEMVKVAQLSNMASKRPGYSLI 668
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 162/345 (46%), Gaps = 63/345 (18%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLI-------RNHVLHAHFRQSI--------LLYAK 93
G + + AR VFD +P+ + W +L+ R HA F ++ ++
Sbjct: 83 GGDFASARLVFDDMPR-RNAVSWNALLSLYLGAGRPAAAHALFCKTPAKNAVSYGVIITG 141
Query: 94 MHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ R G+L + R P A+I GY + G +D A R+FD+MA R+VISWS+
Sbjct: 142 LARAGMLREAQAVYGEMPPRLRDPVGSNAMILGYLRAGEIDMALRVFDTMAARDVISWSS 201
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
MV G G + A+ ++ M E+N V+W +M+ GY KCG RE +F +
Sbjct: 202 MVDGLCKYGTVSEARRLFEAMPERNVVSWTSMVRGYVKCGMYREGLLLFLD--------- 252
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
MR+E V+++ + + + C Q A+++ + +
Sbjct: 253 ----------------------MRREGVQVNAITLSVVLDGCAQ------ASLVGEGIQV 284
Query: 274 GCC-DRTNYVSN-----ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
C R +V++ +LI M+S+ G++ A R F+ +K KD++S++S+IT + +
Sbjct: 285 HCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVSWNSLITGYVQNNMI 344
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
++A +F M E + +++ V+ ++ G + + + FE M
Sbjct: 345 EDAHVLFKLMP----ERDAISWTSVVVGFANRGWMRESVELFEQM 385
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 132/258 (51%), Gaps = 10/258 (3%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
L A++ Y + G + DAQ+LFD M R+VISW+A++ YA G+ +A+ +D M +N+
Sbjct: 42 LNALLTSYGRRGRIQDAQQLFDRMPRRDVISWTALLTAYAEGGDFASARLVFDDMPRRNA 101
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM--R 237
V+W A+++ Y G A +F + +A + + + G + A +Y M R
Sbjct: 102 VSWNALLSLYLGAGRPAAAHALFCKTPAKNAVSYGVIITGLARAGMLREAQAVYGEMPPR 161
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
+ S ++G + A G+++MA V + R ++++ K G +
Sbjct: 162 LRDPVGSNAMILGYLRA----GEIDMAL----RVFDTMAARDVISWSSMVDGLCKYGTVS 213
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A R F + ++V+S++SM+ + G +E L +FL MR EG++ N +T VL C+
Sbjct: 214 EARRLFEAMPERNVVSWTSMVRGYVKCGMYREGLLLFLDMRREGVQVNAITLSVVLDGCA 273
Query: 358 HGGLVEDGCKQFELMTRV 375
LV +G + LMTR+
Sbjct: 274 QASLVGEGIQVHCLMTRM 291
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 246/438 (56%), Gaps = 26/438 (5%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
NL AR FD++P+ + W +++ + ++++ L+ M G T+ +VL
Sbjct: 213 NLETARMYFDEMPERRVAS-WNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVL 271
Query: 111 NACARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAER-NVISWSAMVAGYANCGNMKAA 167
++C+ + P L E+++ R D M R N +A++ +A CGN++ A
Sbjct: 272 SSCSSLGDPCLAESIV-------------RKLDRMNFRSNYFVKTALLDMHAKCGNLEVA 318
Query: 168 KEFYDRM-TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
++ ++++ KNSVTW AMI+ Y + G++ A+ +F+++ E + W +M Y QNG +
Sbjct: 319 QKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGES 378
Query: 227 KAAIEMYKVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
AI+++K M ++ + EV MV SAC LG + + + E + N+
Sbjct: 379 LKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKLSISGYNS 438
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
LI M+ +CG ++ A F + KD++SY+++I+ A HG E++ + KM+ +GI P+
Sbjct: 439 LIFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGIGPD 498
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK-PLTEHLTCMVDLLGRSGQLEKAHSL 404
++T+IGVLTACSH GL+E+G K FE IK P +H CM+D+LGR G+LE+A L
Sbjct: 499 RITYIGVLTACSHAGLLEEGWKVFE------SIKVPDVDHYACMIDMLGRVGKLEEAVKL 552
Query: 405 IMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKW 464
I AG +G+LL A +H ELGE+AA L ++ P +GN LL+NIYA G+W
Sbjct: 553 IQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYALAGRW 612
Query: 465 KDSEIVKMMISETEKKKS 482
KD + V+ + + KK+
Sbjct: 613 KDVDKVRDKMRKQGVKKT 630
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 180/412 (43%), Gaps = 55/412 (13%)
Query: 1 MTSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFD 60
+ K + + + L+Q+H+ L+ L H H+ A L + L + +Y +F
Sbjct: 4 LNKKNIASKITNLHHLRQLHAQLV--LHSQHHHNHWVALLLTQCTHLLAPS-NYTSHIFR 60
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
L + A + + L+ M + +F VL A +L
Sbjct: 61 AATYPNVHVFTCMLKYYSQIGATTQVVVSLFKHMQYYNDIKPYTSFYPVLIKSAGKAGML 120
Query: 121 -----------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
A++ Y K G ++ A++LFD M +R W+ +++GY CGN
Sbjct: 121 LHAYLLKLGHSHDHHVRNAIMGIYAKYGCIELARKLFDEMPDRTAADWNVIISGYWKCGN 180
Query: 164 MKAAKEFYDRM--TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
K A + M +EKN +TW M+ G+ K + A+ FDE+ E + W AM Y
Sbjct: 181 EKEATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYA 240
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
Q+G A+ + ++ M E V +S+C+ LGD +A + + +D +
Sbjct: 241 QSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYF 300
Query: 282 VSNALIHMHSKCGYLDLA---------------WRE-----------------FSRIKNK 309
V AL+ MH+KCG L++A W F+++ +
Sbjct: 301 VKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLFNKMPER 360
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTFIGVLTACSHGG 360
+ +S++SMI +A +G+S +A+ +F +M ++ +P++VT + V +AC H G
Sbjct: 361 NTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLG 412
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 254/459 (55%), Gaps = 23/459 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVL 110
+ +AR++F+++P+ + WT++I H+ + L+ +M + G V + T + +
Sbjct: 285 IGHARELFERMPE-RNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMF 343
Query: 111 NACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC+ E A+I Y + + +A+++FD M ++V+
Sbjct: 344 EACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVV 403
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
SW+A++AGY ++ +++ +K+ ++W MI G+ G++ ++ ++F + + D
Sbjct: 404 SWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQD 463
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
W A+ +V NG + AI + M ++ VR + + + +SA L + +
Sbjct: 464 DIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHT 523
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
V + + + N+L+ M++KCG + + F+ I + +++S++SMIT FA +G +E
Sbjct: 524 LVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEE 583
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL++F KM NEG +PN++TF+GVL+AC+H GL+E G F+ M ++ I+P H C+V
Sbjct: 584 ALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIV 643
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLGR+G L+ A LI +G WGALLGA ++H+ ++ ++AA+ + +L P+
Sbjct: 644 DLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAA 703
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+L+ +Y+S G+ +DSE V+M KKS G SWI
Sbjct: 704 PYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 742
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 36/261 (13%)
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
R P A+I GY K+G +++A R+F+ M ER+VISWS+MV GY G + A+E ++RM
Sbjct: 236 RDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERM 295
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E+N VTW AMI G+ K G CY + ++
Sbjct: 296 PERNVVTWTAMIDGHMKMG-------------------------CY------EVGFGLFL 324
Query: 235 VMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
MR+E V+++ + AC++ G+ + + V + ++ NA+I M+ +
Sbjct: 325 RMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRF 384
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
++ A + F + KDV+S++++I + + + +E +F K + + + +++ ++
Sbjct: 385 SFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDV----ISWTTMI 440
Query: 354 TACSHGGLVEDGCKQFELMTR 374
T S+ G + + F +M +
Sbjct: 441 TGFSNKGKMGKSIELFRMMPK 461
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 20/296 (6%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERN-----VISWSAMVAGYANCGNMKAAKEFYDRM 174
L A++ T + L RL S + N ++ + + + G++K A+ + RM
Sbjct: 77 LLAMLAKPTTLLLQKHLSRLNSSNTQGNRTTKFLVHCHSQITKHGRNGDLKEAESIFSRM 136
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG--YAKAAIEM 232
KN+++W AM+ Y + G + +A+K+F+++ + + + AM Y ++ A ++
Sbjct: 137 PHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKL 196
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ MR+ N IS AM I+ + G V+ A L +++ R SNALI + K
Sbjct: 197 FAEMRERN-SISYAAM---ITGLARAGMVDNAEEL--YLETPVEWRDPVCSNALISGYLK 250
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
G L+ A R F + +DVIS+SSM+ + GK A ++F +M E N VT+ +
Sbjct: 251 VGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMP----ERNVVTWTAM 306
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA---HSLI 405
+ G E G F M + +K LT M + G+ ++ H L+
Sbjct: 307 IDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLV 362
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 250/458 (54%), Gaps = 30/458 (6%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM----HRLGVLTSGFTFS 107
+++A VFDQIP+ +F++ +LIR A R ++ LY +M GV TF
Sbjct: 28 IAHAYLVFDQIPR-PDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFP 86
Query: 108 SVLNACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAER 146
VL AC + + + A+I + G + A LFD A
Sbjct: 87 FVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRARE 146
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
+ ++WSAM+ G A G++ AA++ +D K+ V+W MI Y K G++ A+++FD++
Sbjct: 147 DAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVP 206
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
E D W M YV+ G A+E+++ M++ + V M+ +SAC GD+++
Sbjct: 207 ERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQR 266
Query: 267 LAKHVDEGCCDRTNY---VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
L + + R + + NALI M++KCG + A F +++KDV +++S++ A
Sbjct: 267 LHSSLSD-MFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLAL 325
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
HG E++DMF KM + P+++TF+ VL ACSHGG+V+ G + F LM + ++P +
Sbjct: 326 HGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIK 385
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
H CMVD+LGR+G L++A I K ++ W LL AC+VH EL + A R LL+
Sbjct: 386 HYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKA 445
Query: 444 GPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
+++G+ LL+NIYAS+G+W SE ++ ++ ++ K
Sbjct: 446 RNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 130/319 (40%), Gaps = 85/319 (26%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ AR++FDQ+P+ + W +I +V ++ L+ +M R+G T S+L
Sbjct: 194 DMALARELFDQVPE-RDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLL 252
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE---RN---VISWSAMVAGYANCGNM 164
+ACA G +D QRL S+++ RN V+ +A++ YA CG+M
Sbjct: 253 SACA--------------DSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSM 298
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
K+A E + M +K+ TW +++ G G V E
Sbjct: 299 KSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLE--------------------------- 331
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN 284
+I+M++ M + VR E+ V + AC+ G V D+ N
Sbjct: 332 ----SIDMFEKMLKGKVRPDEITFVAVLIACSHGGMV---------------DKGREFFN 372
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
+ H +R IK+ Y M+ G +EA + M+ EP
Sbjct: 373 LMQH----------KYRVEPNIKH-----YGCMVDMLGRAGLLKEAFEFIDTMK---CEP 414
Query: 345 NQVTFIGVLTACSHGGLVE 363
N V + +L+AC G +E
Sbjct: 415 NSVIWRTLLSACRVHGEIE 433
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 40/282 (14%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM----RQENVRISEVAM 248
G + A VFD+I PD + + + A+ +Y M VR ++
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL---------- 298
+ ACT +G + + HV + C+ +V NALI MH+ CG L +
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 299 ----AWRE-----------------FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
AW F KD++S++ MITA+A G A ++F ++
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ V G + SH +E FE M R+ G KP + ++ SG
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALE----LFEQMQRM-GEKPDIVTMLSLLSACADSGD 260
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
L+ L D + +LG + + A+ G + + H
Sbjct: 261 LDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAH 302
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 252/503 (50%), Gaps = 69/503 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM---HRLGVLTSGFTFS 107
+L AR+ FD++ K KT W +LI + + R ++ +Y M G+ TFS
Sbjct: 109 DLELARKTFDEMGK-KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFS 167
Query: 108 SVLNACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAER 146
S L AC V + + A+I Y+K G ++ A+++FD + R
Sbjct: 168 SALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR 227
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG-------------- 188
+VI+W+ M++GYA G A E + RM + N VT++ ++
Sbjct: 228 DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIH 287
Query: 189 ---------------------YGKCGE-VREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
Y KC + EA++VF+ + D W + V YVQ G A
Sbjct: 288 RKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQA 347
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
K A++++K M+ ENV +E+ + +SAC LG + + G C + N+L
Sbjct: 348 KDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSL 407
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
++M+++CG LD F+ I++K ++S+S++I A+A HG S+ L+ F ++ EG+ +
Sbjct: 408 MNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADD 467
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
VT + L+ACSHGG++++G + F M G+ P H CMVDLL R+G+LE A +LI
Sbjct: 468 VTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIH 527
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS-ALLANIYASMGKWK 465
D DA W +LL CK+H + + A L EL E ++ LL+N+YA G+W
Sbjct: 528 DMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD 587
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D V+ + +K+PGCS+I
Sbjct: 588 D---VRKTRNRRAARKNPGCSYI 607
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 39/296 (13%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
WT ++ + H+R+++ Y +M G+ G F + C+ L K
Sbjct: 26 WTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDL---------KQ 76
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G + A L + E ++I +A++ YA C +++ A++ +D M +K VTW A+IAGY
Sbjct: 77 GQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYS 136
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ G+ R A K++ ++ E ++ +
Sbjct: 137 RNGDHRGALKIYQDMVSKSP----------------------------EGMKPDAITFSS 168
Query: 251 AISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
A+ ACT +GD+ I A+ V G + V NALI+M+SKCG L+ A + F R+KN+
Sbjct: 169 ALYACTVVGDISQGREIEARTVASGYAS-DSIVQNALINMYSKCGSLESARKVFDRLKNR 227
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
DVI++++MI+ +A G + +AL++F +M +PN VTFIG+LTAC++ +E G
Sbjct: 228 DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQG 283
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
YGKCG V +A VF I P++ W + + +NG+ + A+ Y+ M E +R
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIK 307
V AI C+ D++ +L + E + + ALI M+++C L+LA + F +
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRN---EGIEPNQVTFIGVLTACSHGGLVED 364
K +++++++I ++ +G + AL ++ M + EG++P+ +TF L AC+ G +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G ++ E T G + ++++ + G LE A + K+ D W ++
Sbjct: 182 G-REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR-DVIAWNTMI 236
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG + A F I++ + +S++ ++ AFA +G +EAL + +M EG+ P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 349 FIGVLTACSHGGLVEDG--CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
F+ + CS ++ G L TR+ + T ++ + R LE A
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILG--TALITMYARCRDLELAR---- 114
Query: 407 DYKDFCDAG-----TWGALLGA 423
K F + G TW AL+
Sbjct: 115 --KTFDEMGKKTLVTWNALIAG 134
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 159/532 (29%), Positives = 258/532 (48%), Gaps = 94/532 (17%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D YA VF I + Q +W +++R + L + ++ LY M LG+L + +TF +
Sbjct: 14 DGFPYAISVFATIQE-PNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFL 72
Query: 110 LNACARVPSLLE------------------------------------------------ 121
L +CA+ + E
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132
Query: 122 ----AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
A+I GY G + AQ +FD + ++V+SW+AM++GYA G+ K A E + M +
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192
Query: 178 N-------------------SV-------TWV-------------AMIAGYGKCGEVREA 198
N SV +W+ A+I Y KCG+V A
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+F+ +S D W + Y K A+ +++ M + ++V +V + AC L
Sbjct: 253 CGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHL 312
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
G +++ + ++D+ D TN S +LI M++KCG ++ A + F+ + +K + S+++
Sbjct: 313 GAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 372
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI FA HG++ D+F +MR GIEP+ +TF+G+L+ACSH G ++ G F+ MT+ +
Sbjct: 373 MIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDY 432
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
I P EH CM+DLLG SG ++A +I D W +LL AC+ H N EL E
Sbjct: 433 DITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESF 492
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AR+L+++ PE G+ LL+NIYA+ G+W + V+ +++ KK PGCS I
Sbjct: 493 ARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSI 544
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 257/502 (51%), Gaps = 70/502 (13%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFS 107
GD+ AR+VFD +P T LW +L+ +++ + +M G V T +
Sbjct: 165 GDD---ARKVFDTVPSPDT-ILWNTLLAG----LPGSEALEAFVRMVDAGRVRPDSTTLA 216
Query: 108 SVLNACARVPSLL-----------------EAVICG----YTKIGLMDDAQRLFDSMAER 146
S L A A + E V+ G Y+K G MD AQ LFD M
Sbjct: 217 SSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNP 276
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCG--------- 193
++++++A+++GY+ G ++++ E + +T NS T VA+I Y G
Sbjct: 277 DLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLH 336
Query: 194 --------------------------EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
++ A+ +FD + E W AM Y QNG +
Sbjct: 337 AFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTE 396
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A+ ++++M++ NV+ + + + +SAC LG + + + + + + + YV ALI
Sbjct: 397 MAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALI 456
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M++KCG + A F R+ NK+V+S+++MI+ + HG+ EAL ++ M + I P
Sbjct: 457 DMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSS 516
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+ V+ ACSHGGLV++G K F +MT + I P EH TCMVDLLGR+G+L +A LI +
Sbjct: 517 TFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISE 576
Query: 408 Y-KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ + G WGALLGAC VH N++L ++A++ L EL E G LL+N+Y S + +
Sbjct: 577 FPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSE 636
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
+ +V+ + K+PGC+ I
Sbjct: 637 AAVVRQEAKTRKLVKTPGCTLI 658
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 173/398 (43%), Gaps = 46/398 (11%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM- 185
Y K+ DDA+++FD++ + I W+ ++AG ++A D + T +A
Sbjct: 159 YFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDAGRVRPDSTTLASS 218
Query: 186 ---------------IAGYG--------------------KCGEVREAKKVFDEISEPDA 210
+ GYG KCG++ A+ +FD + PD
Sbjct: 219 LRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDL 278
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
+ A+ Y NG ++++E++K + R + +V I + G +A L
Sbjct: 279 VAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAF 338
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
V + D VS AL ++ + ++ A F + K + S+++MI+ +A +G ++ A
Sbjct: 339 VVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMA 398
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH---LTC 387
+ +F M+ ++PN +T L+AC+H G + G + + R+ + L + +T
Sbjct: 399 VALFQLMQELNVQPNPITISSTLSACAHLGALSLG----KWVHRIISKEKLELNVYVMTA 454
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
++D+ + G + +A S I D D + +W A++ +H + +L+
Sbjct: 455 LIDMYAKCGSIAEARS-IFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILP 513
Query: 448 TGNSALLANIYA-SMGKWKDSEIVKMMISETEKKKSPG 484
T +S L+ IYA S G D + E + +PG
Sbjct: 514 T-SSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPG 550
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 216/407 (53%), Gaps = 39/407 (9%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT--- 175
L+ +I Y K GL+D+A+ LFD M +RNV+SW+ M++ Y+N A +F M
Sbjct: 53 LINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREG 112
Query: 176 ---------------------------------EKNSVTWVAMIAGYGKCGEVREAKKVF 202
E + A+I Y K GE +A VF
Sbjct: 113 VRPNMYTYSSVLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVF 172
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+E+ D W ++ + QN + +YK M++ + + + + ACT L +E
Sbjct: 173 NEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLE 232
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI-KNKDVISYSSMITAF 321
+ + HV + D+ ++NAL+ M+ KCG L+ A F+R+ KDVIS+S+MI
Sbjct: 233 LGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGL 290
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
A +G S +AL +F M+++G +PN +T +GVL ACSH GLV DG F+ M FGI P
Sbjct: 291 AQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPG 350
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
EH C++DLLGR+G+L++A LI + DA TW LLGAC+VH N +L AA+ +L
Sbjct: 351 REHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEIL 410
Query: 442 ELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L P G LL+NIYA+ KW+D V+ + KK PGCSWI
Sbjct: 411 KLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWI 457
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 146/366 (39%), Gaps = 100/366 (27%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR +FD++P + WT++I + +++ M R GV + +T+SSVL
Sbjct: 67 LDEARNLFDEMPD-RNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLR 125
Query: 112 ACARVPSLLE------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
AC + +L + A+I Y+K+G DA +F+ M +++ W++
Sbjct: 126 ACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNS 185
Query: 154 MVAGYANCGNMKAAKEFYDRM------TEKNSVTWV------------------------ 183
++ G+A + Y RM +++++T V
Sbjct: 186 IIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYD 245
Query: 184 -------AMIAGYGKCGEVREAKKVFDE-ISEPDASCWAAMTVCYVQNGYAKAAIEMYKV 235
A++ Y KCG + +A +F ++E D W+ M QNG++ A+++++
Sbjct: 246 QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEA 305
Query: 236 MRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
M+ + + + + ++G + AC S G
Sbjct: 306 MKSKGPKPNYITILGVLFAC-----------------------------------SHAGL 330
Query: 296 LDLAWREFSRIKNKDVIS-----YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
++ W F +K I Y +I GK EA+ + +M + EP+ VT+
Sbjct: 331 VNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNH---EPDAVTWR 387
Query: 351 GVLTAC 356
+L AC
Sbjct: 388 ILLGAC 393
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 40/262 (15%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
I C G V+ A ++ +HV + ++ N LI+M+ K G LD A F + +++V
Sbjct: 23 IKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNV 82
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS--------HGGLVE 363
+S+++MI+A+++ + +ALD + M EG+ PN T+ VL AC HG +++
Sbjct: 83 VSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQLHGSILK 142
Query: 364 DGCKQFELMTR------------------VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
G + ++ R VF + +T L ++G Q +
Sbjct: 143 VGLES-DVFVRSALIDTYSKLGEQHDALNVFN-EMITGDLVVWNSIIGGFAQNSDGDETL 200
Query: 406 MDYK-----DF-CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYA 459
YK DF D T ++L AC ELG H+L+ + N+ALL ++Y
Sbjct: 201 HLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDLILNNALL-DMYC 259
Query: 460 SMGKWKDSEIV--KMMISETEK 479
G +D+ ++ +MM TEK
Sbjct: 260 KCGSLEDANLLFTRMM---TEK 278
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 34/232 (14%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------- 121
+W S+I ++ +++ LY +M R + T +SVL AC + +LLE
Sbjct: 182 VWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGL-ALLELGRQVHVH 240
Query: 122 ------------AVICGYTKIGLMDDAQRLFDSM-AERNVISWSAMVAGYANCGNMKAAK 168
A++ Y K G ++DA LF M E++VISWS M+AG A G A
Sbjct: 241 VLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADAL 300
Query: 169 EFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEISE-----PDASCWAAMTVC 219
+ ++ M K N +T + ++ G V + F + E P + +
Sbjct: 301 KLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDL 360
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
+ G A+++ M E ++ ++G AC +V++A AK +
Sbjct: 361 LGRAGKLDEAVKLIHEMNHEPDAVTWRILLG---ACRVHKNVDLAIYAAKEI 409
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 223/398 (56%), Gaps = 16/398 (4%)
Query: 94 MHRLGVLTSGFTFSSVLNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
M R V+ ++VL+ CA +L I Y + + L D+
Sbjct: 1 MKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLV-----SDTLIDAQVS------C 49
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
A++ YA+C +M+ A++ Y+R++EK V M+ GY K G+V A +F+ + D
Sbjct: 50 ALMNMYASCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVS 109
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W+AM Y ++ A+ ++ M++ V+ E+ M+ ISAC +G +E A + V+
Sbjct: 110 WSAMIAGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVE 169
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ + NALI M SKCG L LA F+ + K+V++++S+ITA A HG + AL
Sbjct: 170 NHSMCKILPIGNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALT 229
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F M++EGI+PN VTF+G+L AC H GLVE+G F++M + + I+P+ EH CMVDLL
Sbjct: 230 LFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLL 289
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR+ L +A LI + WG+LL AC++H + ELG AA+ +LEL P G
Sbjct: 290 GRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQV 349
Query: 453 LLANIYASMGKWKDSEIVK--MMISETEKKKSPGCSWI 488
LL+NIYA G W D + V+ M + T KKK GCSW+
Sbjct: 350 LLSNIYAEYGNWNDVKEVRGVMEVQGTWKKK--GCSWM 385
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 260/497 (52%), Gaps = 30/497 (6%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
++ R T L+Q+H++ ++ LIR L+YAR +FD P
Sbjct: 15 VLSRCSTRAHLEQLHAHAFVAGRAAAQTTTFH---LIRFAAFRLSCLTYARHLFDATPH- 70
Query: 66 KTQFLWTSLIRNHVLHAHFRQSIL-----------LYAKMHRLG-VLTSGFTFSSVLNAC 113
+ FL+++++ +V A S L+ +M R G + F + VL A
Sbjct: 71 PSVFLYSAILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGRPAPNQFVYPLVLRAA 130
Query: 114 ARVP-SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ V +++++ K G + I ++++ GY+ G M A++ +D
Sbjct: 131 SGVGVGIVKSIHSHACKSGFCG------------HDIIRTSVLDGYSRHGMMADARKLFD 178
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+TE+N V+W A+++GY + G+V +A +F+ + E D + W A+ QNG A+ +
Sbjct: 179 GLTERNVVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVEAVGI 238
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M R + + +SAC LG +++ ++ + C + V N LI M+ K
Sbjct: 239 FGRMVGAGFRPNATTVSCVLSACGHLGMLKIGKLIHCYAWRTCVGFGSSVLNGLIDMYGK 298
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG L+ A F + ++ + +++S+I A HG S+ A+ +F +MR EG+EP+ VTF+G+
Sbjct: 299 CGNLEGARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVVTFVGL 358
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L AC+HGG V++G + FELM GI+P EH C++DLLGR+G+ + A ++I D +
Sbjct: 359 LNACTHGGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDMRIEA 418
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
D WG+LL AC+VH E E+A R LLEL P +LAN+Y+ G W++ V+
Sbjct: 419 DEVMWGSLLNACRVHRQVEFAELAIRKLLELDPNNANYVVMLANVYSEGGLWEEVRKVRK 478
Query: 473 MISETE-KKKSPGCSWI 488
+ E KK PGCSWI
Sbjct: 479 FVKEENIGKKLPGCSWI 495
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 260/531 (48%), Gaps = 66/531 (12%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+H +++++ DQ Y LI G N+ AR VFDQ+ + KT WT++I
Sbjct: 172 QLHGFVVRS---GFDQDVYVGTSLIDFYSKNG-NIEEARLVFDQLSE-KTAVTWTTIIAG 226
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP-------------------- 117
+ S+ L+A+M V+ + SSVL+AC+ +
Sbjct: 227 YTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 286
Query: 118 -SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------------------ 158
S++ +I YTK + ++LFD M +N+ISW+ M++GY
Sbjct: 287 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 346
Query: 159 --------------ANCGNMKAAKE-------FYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
+CG+ +A ++ E + +I Y K + +
Sbjct: 347 LGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLID 406
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
AKKVFD ++E + + AM Y A+E++ MR + +E I+A +
Sbjct: 407 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASN 466
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
L + + + D +V+NAL+ M++KCG ++ A + F+ +DV+ ++SM
Sbjct: 467 LASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSM 526
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I+ A HG+++EAL MF +M EGI+PN VTF+ VL+ACSH G VEDG F M FG
Sbjct: 527 ISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FG 585
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
IKP TEH C+V LLGRSG+L +A I A W +LL AC++ N ELG+ AA
Sbjct: 586 IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAA 645
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ P+ +G+ LL+NI+AS G W D + V+ + +E K PG SWI
Sbjct: 646 EMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWI 696
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 159/369 (43%), Gaps = 70/369 (18%)
Query: 39 QFLIR--LLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR 96
QFL++ LQ+P NL R+ F L S+ RN ++H +++ ++
Sbjct: 32 QFLLQNPCLQIP--NLRPKRREF-------ANLLQLSISRNPIIHYK-----IIHGQIIV 77
Query: 97 LGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
G+ + F + ++N C +K +D+A+ +FD M +N+I+WS+MV+
Sbjct: 78 SGLQSDTFLANILINVC--------------SKSDRVDNARVVFDKMPHKNLITWSSMVS 123
Query: 157 GYANCGNMKAAKEFYDRMTEKNS------------------------------------- 179
Y+ G + A + + K+
Sbjct: 124 MYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFD 183
Query: 180 ---VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
++I Y K G + EA+ VFD++SE A W + Y + G + ++E++ M
Sbjct: 184 QDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQM 243
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
R+ NV + +SAC+ L +E + +V + V N LI ++KC +
Sbjct: 244 RETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRV 303
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
+ F ++ K++IS+++MI+ + + EA+ +F +M G +P+ VLT+C
Sbjct: 304 KAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSC 363
Query: 357 SHGGLVEDG 365
+E G
Sbjct: 364 GSREALEQG 372
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RN 339
+++N LI++ SK +D A F ++ +K++I++SSM++ ++ G S+EAL +F+ + R
Sbjct: 85 FLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRK 144
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
G PN+ V+ AC+ G+VE G + + R G T ++D ++G +E
Sbjct: 145 SGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRS-GFDQDVYVGTSLIDFYSKNGNIE 203
Query: 400 KAHSLIMDYKDFCDAGTWGALLGA 423
+A L+ D A TW ++
Sbjct: 204 EAR-LVFDQLSEKTAVTWTTIIAG 226
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 245/494 (49%), Gaps = 61/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
R+VF ++P + WT++I V + +++++ +++M R V +TF+ L ACA
Sbjct: 170 GRRVFHEMP-MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACA 228
Query: 115 RVPSL-------LEAVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSA 153
+L +A+ G Y K G ++ LF+ M+ R+V+SW+
Sbjct: 229 DSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTT 288
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG--------------------- 188
++ G + A + + RM E N T+ A+I+G
Sbjct: 289 IITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLG 348
Query: 189 --------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y KCG++ + +F E++ D W+ + Y Q G+ A E+
Sbjct: 349 LAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLS 408
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
MR E + +E A+ +SAC + +E L +V + T V +ALI+M+ KCG
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCG 468
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
++ A R F +N D++S+++MI +A+HG S+E +D+F K+ G+ P+ VTFIGVL+
Sbjct: 469 SIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLS 528
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV+ G F M++ + I P EH CM+DLL R+G+L A +I D
Sbjct: 529 ACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDD 588
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
W LL AC+VH + E G A +L+L P G LANIYAS GKW+++ ++ ++
Sbjct: 589 VVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLM 648
Query: 475 SETEKKKSPGCSWI 488
K PG SWI
Sbjct: 649 KSKGVIKEPGWSWI 662
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 202/476 (42%), Gaps = 76/476 (15%)
Query: 24 LKTLTKPHDQYHYYAQFLIRLLQLPGDN-----------LSYARQVFDQIPKCKTQFLWT 72
L+ L + +D F I LP N L AR++FD++ + K + WT
Sbjct: 27 LQVLERSNDNLSQNIHF-ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQ-KDEISWT 84
Query: 73 SLIRNHVLHAHFRQSILLYAKM----------------HRLGVLTSGFTFSSVLNACARV 116
+LI +V +++LL+ M H+ L S + +L+ A
Sbjct: 85 TLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVK 144
Query: 117 PSLLEAVICG------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
L+ +V G YTK G + + +R+F M RNV+SW+A++ G G K A +
Sbjct: 145 TGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVY 204
Query: 171 YDRM----TEKNSVTWV---------------------AMIAG--------------YGK 191
+ M E +S T+ AM G Y K
Sbjct: 205 FSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNK 264
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG++ +F+++S D W + VQ G + A++ + MR+ +V +E
Sbjct: 265 CGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAV 324
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
IS C L +E L + + V N+++ M++KCG L + F + +D+
Sbjct: 325 ISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDI 384
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S+S++I + G EA ++ MR EG +P + VL+AC + ++E G KQ
Sbjct: 385 VSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHG-KQLHA 443
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
G++ L+ ++++ + G +E+A S I D + D +W A++ H
Sbjct: 444 YVLSIGLEHTAMVLSALINMYCKCGSIEEA-SRIFDAAENDDIVSWTAMINGYAEH 498
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 265/540 (49%), Gaps = 64/540 (11%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL------PGDNLSYARQVFDQI 62
R+K+ L Q+H+++L+ H + F+ L P +++AR+ F+
Sbjct: 26 RTKSIPTLLQIHAFILRH--SLHSNLNLLTAFVTTCASLAASAKRPLAIINHARRFFNA- 82
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG------------------------ 98
+ FL S+I H F Q L+ + R
Sbjct: 83 THTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVKGCATRVATG 142
Query: 99 --------VLTSGFTFS--------------SVLNACARVPSLLE--------AVICGYT 128
VL +G F VL + +V + AVI GY
Sbjct: 143 EGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYA 202
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
+ G M +A+RLFD M +R++++++AM+ GY G + A+E ++ M E+N V+W +M++G
Sbjct: 203 RCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSG 262
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y G+V AK +FD + E + W AM Y QN + A+E+++ M+ +V +EV +
Sbjct: 263 YCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTV 322
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V + A LG +++ + + DR+ + ALI M++KCG + A F +
Sbjct: 323 VCVLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTE 382
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
++ S++++I FA +G ++EAL++F +M EG PN+VT IGVL+AC+H GLVE+G +
Sbjct: 383 RETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRW 442
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F M R FGI P EH CMVDLLGR+G L++A +LI + + L AC
Sbjct: 443 FNAMER-FGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFN 501
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ E + ++++ + GN +L N+YA+ +W D E VK M+ + K CS I
Sbjct: 502 DVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSVI 561
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 257/494 (52%), Gaps = 60/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR-----LGVLTSGFTFSSV 109
A ++F+++P+ + W +++ ++++ H ++I + M + L L SG +
Sbjct: 171 AEELFNEMPE-RNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDK 229
Query: 110 LNACARV----------PSLLEA---VICGYTKIGLMDDAQRLFDSM--------AERNV 148
L R+ L++A +I GY + G+ +A++LFD + + RNV
Sbjct: 230 LVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNV 289
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP 208
ISW++M+ Y G++ +A+E +D+M E+++ +W MI+GY + +++EA +F + EP
Sbjct: 290 ISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEP 349
Query: 209 DA-------------------------------SCWAAMTVCYVQNGYAKAAIEMYKVMR 237
D W +M Y +N K A+ ++ M+
Sbjct: 350 DTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 409
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
E + + +SAC L D+ + + + V + ++N+L+ M+S+CG +
Sbjct: 410 LEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFIADLP-INNSLVTMYSRCGAIV 468
Query: 298 LAWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
A F + +DVIS+++MI +A HG + EAL +F M+ ++P+ +TFI VL AC
Sbjct: 469 EARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNAC 528
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
+H GL+E+G ++F M GIKP EH +VD++GR GQLE+A SLI D
Sbjct: 529 AHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAV 588
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
WGALLGACKVH N E+ AA L++L PE + LL N+YA +G+W D+ ++ M+ +
Sbjct: 589 WGALLGACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEK 648
Query: 477 TEKKKSPGCSWISS 490
+K G S + S
Sbjct: 649 NNVQKDAGYSRVDS 662
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 191/451 (42%), Gaps = 102/451 (22%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR++FD T W +I +V ++ L+ +M +++ S
Sbjct: 73 INEARELFDSTEHWNT-ITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLS---- 127
Query: 112 ACARVPSLLEAVICGYTKIG--LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
GY G ++ A+ +FD M E + +SW+ M++GYA G M A+E
Sbjct: 128 --------------GYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEE 173
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++ M E+N V+W AM++GY G V +A + F + + D++ A+ +QN
Sbjct: 174 LFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQN---DKL 230
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQ-LGDVEMAAILAKHVDE--GCCD----RTNYV 282
+E +++ Q + + +V A + G MA K D CCD R N +
Sbjct: 231 VEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVI 290
Query: 283 S-NALIHMHSKCGYL--------------DLAWRE-----------------FSRIKNKD 310
S N++I + + G + +W FSR+ D
Sbjct: 291 SWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPD 350
Query: 311 VISYSSMITAFADHG----------------------------KSQE---ALDMFLKMRN 339
+S++ MI+ F++ G K+++ A+++FL+M+
Sbjct: 351 TLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQL 410
Query: 340 EGIEPNQVTFIGVLTACSHGGLVE--DGCKQFELMTRVF-GIKPLTEHLTCMVDLLGRSG 396
EG +P++ T +L+AC+ GLV+ G + +L+T+ F P+ L V + R G
Sbjct: 411 EGKKPDRHTLSSILSACA--GLVDLVLGTQIHQLVTKAFIADLPINNSL---VTMYSRCG 465
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+ +A + + D +W A++G H
Sbjct: 466 AIVEARMVFDEMNLQRDVISWNAMIGGYAYH 496
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 146/345 (42%), Gaps = 59/345 (17%)
Query: 106 FSSVLNACARVPSL--LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
FSS +VP L I + G +++A+ LFDS N I+W+ M+ Y
Sbjct: 44 FSSSKANSFQVPEFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRRE 103
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKC------------------------------- 192
M A++ ++ M ++ V+W M++GY C
Sbjct: 104 MLKARQLFEEMPNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYA 163
Query: 193 --GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
G + +A+++F+E+ E + W AM Y+ NG+ + AIE +K+M + + S A+V
Sbjct: 164 KSGTMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRD-SASLRALVS 222
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRI-- 306
+ +L VE IL ++ G + + V N LI + + G A + F RI
Sbjct: 223 GLIQNDKL--VEAERILLQY--GGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPL 278
Query: 307 ------KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
++VIS++SMI + G A ++F KM +E + ++ +++
Sbjct: 279 CCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKM----VERDTFSWNTMISGYVQIL 334
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+++ F M +P T M+ G L+ AH L
Sbjct: 335 DMKEASNLFSRMP-----EPDTLSWNMMISGFSEIGSLKLAHDLF 374
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 254/459 (55%), Gaps = 23/459 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVL 110
+ +AR++F+++P+ + WT++I H+ + L+ +M + G V + T + +
Sbjct: 206 IGHARELFERMPE-RNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMF 264
Query: 111 NACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC+ E A+I Y + + +A+++FD M ++V+
Sbjct: 265 EACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVV 324
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
SW+A++AGY ++ +++ +K+ ++W MI G+ G++ ++ ++F + + D
Sbjct: 325 SWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQD 384
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
W A+ +V NG + AI + M ++ VR + + + +SA L + +
Sbjct: 385 DIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHT 444
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
V + + + N+L+ M++KCG + + F+ I + +++S++SMIT FA +G +E
Sbjct: 445 LVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEE 504
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL++F KM NEG +PN++TF+GVL+AC+H GL+E G F+ M ++ I+P H C+V
Sbjct: 505 ALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIV 564
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLGR+G L+ A LI +G WGALLGA ++H+ ++ ++AA+ + +L P+
Sbjct: 565 DLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAA 624
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+L+ +Y+S G+ +DSE V+M KKS G SWI
Sbjct: 625 PYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 663
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 36/261 (13%)
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
R P A+I GY K+G +++A R+F+ M ER+VISWS+MV GY G + A+E ++RM
Sbjct: 157 RDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERM 216
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E+N VTW AMI G+ K G CY + ++
Sbjct: 217 PERNVVTWTAMIDGHMKMG-------------------------CY------EVGFGLFL 245
Query: 235 VMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
MR+E V+++ + AC++ G+ + + V + ++ NA+I M+ +
Sbjct: 246 RMRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRF 305
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
++ A + F + KDV+S++++I + + + +E +F K + + + +++ ++
Sbjct: 306 SFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDV----ISWTTMI 361
Query: 354 TACSHGGLVEDGCKQFELMTR 374
T S+ G + + F +M +
Sbjct: 362 TGFSNKGKMGKSIELFRMMPK 382
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 15/258 (5%)
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
+ + + G++K A+ + RM KN+++W AM+ Y + G + +A+K+F+++ + +
Sbjct: 36 SQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTAS 95
Query: 213 WAAMTVCYVQNG--YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
+ AM Y ++ A +++ MR+ N IS AM I+ + G V+ A L +
Sbjct: 96 YNAMITAYTRSNPMMIGEASKLFAEMRERN-SISYAAM---ITGLARAGMVDNAEEL--Y 149
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
++ R SNALI + K G L+ A R F + +DVIS+SSM+ + GK A
Sbjct: 150 LETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHA 209
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
++F +M E N VT+ ++ G E G F M + +K LT M +
Sbjct: 210 RELFERMP----ERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFE 265
Query: 391 LLGRSGQLEKA---HSLI 405
G+ ++ H L+
Sbjct: 266 ACSEFGEYKEGIQMHGLV 283
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 251/502 (50%), Gaps = 63/502 (12%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D+ AR V P + WTSLI + HF +++ + +M R GV+ + FTF
Sbjct: 6 DHPESARLVLRLTP-ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCA 64
Query: 110 LNACA--RVPSLLE-----AVICG--------------YTKIGLMDDAQRLFDSMAERNV 148
A A R+P + AV CG Y K L DDA++LFD + ERN+
Sbjct: 65 FKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNL 124
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVA-------------------- 184
+W+A ++ G + A E + NS+T+ A
Sbjct: 125 ETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 184
Query: 185 ---------------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+I YGKC ++R ++ +F E+ +A W ++ YVQN + A
Sbjct: 185 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 244
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+Y R++ V S+ + +SAC + +E+ + H + C +RT +V +AL+ M
Sbjct: 245 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 304
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM--RNEGIEPNQV 347
+ KCG ++ + + F + K++++ +S+I +A G+ AL +F +M R G PN +
Sbjct: 305 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 364
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+ +L+ACS G VE+G K F+ M +GI+P EH +C+VD+LGR+G +E+A+ I
Sbjct: 365 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 424
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
WGAL AC++H +LG +AA +L +L P+ +GN LL+N +A+ G+W ++
Sbjct: 425 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 484
Query: 468 EIVKMMISETEKKKSPGCSWIS 489
V+ + KK G SWI+
Sbjct: 485 NTVREELKGVGIKKGAGYSWIT 506
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 8/238 (3%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y K A+ V + W ++ QNG+ A+ + MR+E V ++
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61
Query: 249 VGAISACTQLG-DVEMAAILAKHVDEGCCDRT--NYVSNALIHMHSKCGYLDLAWREFSR 305
A A L V I A V C R +V + M+ K D A + F
Sbjct: 62 PCAFKAVASLRLPVTGKQIHALAVK---CGRILDVFVGCSAFDMYCKTRLRDDARKLFDE 118
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
I +++ ++++ I+ G+ +EA++ F++ R PN +TF L ACS + G
Sbjct: 119 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 178
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ L+ R G ++D G+ Q+ ++ +I +A +W +L+ A
Sbjct: 179 MQLHGLVLRS-GFDTDVSVCNGLIDFYGKCKQI-RSSEIIFTEMGTKNAVSWCSLVAA 234
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SK + + A ++V+S++S+I+ A +G AL F +MR EG+ PN T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 349 F 349
F
Sbjct: 61 F 61
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 257/499 (51%), Gaps = 67/499 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVL 110
+ +AR+VFD +P T LW +L+ +++ +A+M G V T +SVL
Sbjct: 165 VDHARKVFDTVPSPDT-VLWNTLLAG----LSGSEAVESFARMVCDGSVRPDATTLASVL 219
Query: 111 NACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
A A V + L +I Y+K G ++ A+ LFD M + +++
Sbjct: 220 PAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLV 279
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCG------------ 193
+++A+++GY+ G + ++ + + NS T VA+I + G
Sbjct: 280 AYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFV 339
Query: 194 -----------------------EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++ A+K FD + E W AM Y QNG + A+
Sbjct: 340 LKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAV 399
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+++ M + NVR + + + +SAC QLG + + L + + E + YV ALI M+
Sbjct: 400 ALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMY 459
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG + A R F+ + NK+V+S+++MI + HG+ EAL ++ M + + P TF+
Sbjct: 460 AKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFL 519
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY-K 409
VL ACSHGGLVE+G K F MT + I P EH TCMVDLLGR+GQL++A LI ++ K
Sbjct: 520 SVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPK 579
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
G WGALLGAC VH +++L ++A++ L EL PE +G LL+N++ S ++ ++ +
Sbjct: 580 SAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAV 639
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ + K+PG + I
Sbjct: 640 VRQEAKSRKLVKTPGYTLI 658
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 26/183 (14%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+++ AR+ FD +P+ KT W ++I + + ++ L+ +M +L V + T SS
Sbjct: 362 NDMESARKAFDTMPE-KTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISST 420
Query: 110 LNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNV 148
L+ACA++ +L + A+I Y K G + +A+R+F++M +NV
Sbjct: 421 LSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNV 480
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFDE 204
+SW+AM+AGY G A + Y M + S T+++++ G V E KVF
Sbjct: 481 VSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRS 540
Query: 205 ISE 207
+++
Sbjct: 541 MTD 543
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVA 247
Y V A+KVFD + PD W + + A+E + M + +VR
Sbjct: 159 YFVLSRVDHARKVFDTVPSPDTVLWNTL----LAGLSGSEAVESFARMVCDGSVRPDATT 214
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ + A ++ DV M + ++ +V LI ++SKCG ++ A F ++
Sbjct: 215 LASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMME 274
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG-----------VLTAC 356
D+++Y+++I+ ++ +G ++++F ++ G+ PN T + +L C
Sbjct: 275 KPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQC 334
Query: 357 SHGGLVEDG 365
HG +++ G
Sbjct: 335 LHGFVLKSG 343
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 168/547 (30%), Positives = 274/547 (50%), Gaps = 74/547 (13%)
Query: 10 SKTFNQLK------QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
SK+F+ L+ Q+H Y+LK+ + + L+ L + AR+VFD++
Sbjct: 202 SKSFSSLRSVNGGEQLHGYILKS---GFGERNSVGNSLV-AFYLKNHRVDSARKVFDEMT 257
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVPSLLE 121
+ + W S+I +V + + + ++ +M G+ T SV CA R+ SL
Sbjct: 258 E-RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 122 AVICG-------------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
AV C Y+K G +D A+ +F M+ R+V+S+++M+AGYA G
Sbjct: 317 AVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREG 376
Query: 163 NMKAAKEFYDRMTEKN------SVT--------------------WV------------- 183
A + ++ M E+ +VT W+
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN 436
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
A++ Y KCG +REA+ VF E+ D W + Y +N YA A+ ++ ++ E R
Sbjct: 437 ALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEK-RF 495
Query: 244 S--EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
S E + + AC L + + ++ +V+N+L+ M++KCG L LA
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARL 555
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F I +KD++S++ MI + HG +EA+ +F +MR GIEP++++F+ +L ACSH GL
Sbjct: 556 LFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGL 615
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + F +M I+P EH C+VD+L R+G L KA+ I + DA WGALL
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALL 675
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
C++H + +L E A + EL PE TG L+ANIYA KW++ + ++ I + +K
Sbjct: 676 CGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRK 735
Query: 482 SPGCSWI 488
+PGCSWI
Sbjct: 736 NPGCSWI 742
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 159/374 (42%), Gaps = 46/374 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A +VFDQ+ K + W L+ F SI L+ KM GV +TFS V
Sbjct: 144 DLKEASRVFDQV-KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV- 201
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
++ S L +V G G + L ERN + GN
Sbjct: 202 ---SKSFSSLRSVNGGEQLHGYI-----LKSGFGERNSV------------GN------- 234
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+++A Y K V A+KVFDE++E D W ++ YV NG A+ +
Sbjct: 235 -------------SLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++ M + I +V + C + + + + C R + N L+ M+
Sbjct: 282 SVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMY 341
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
SKCG LD A F + + V+SY+SMI +A G + EA+ +F +M EGI P+ T
Sbjct: 342 SKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 351 GVLTACSHGGLVEDGCKQFE-LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
VL C+ L+++G + E + G + ++D+ + G + +A L+
Sbjct: 402 AVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN--ALMDMYAKCGSMREAE-LVFSEM 458
Query: 410 DFCDAGTWGALLGA 423
D +W ++G
Sbjct: 459 RVKDIISWNTVIGG 472
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 9/217 (4%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y CG+++EA +VFD++ A W + ++G +I ++K M V +
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+ + L V L ++ + N V N+L+ + K +D A + F +
Sbjct: 199 SCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTE 258
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+DVIS++S+I + +G +++ L +F++M GIE + T + V C+ L+ G
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLG--- 315
Query: 369 FELMTRVFGIKPL--TEHLTC--MVDLLGRSGQLEKA 401
FG+K E C ++D+ + G L+ A
Sbjct: 316 --RAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 238/438 (54%), Gaps = 17/438 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQ+FD++ K + + S+I +V H + + L+ M + +++S+++
Sbjct: 173 LGIARQLFDRMMK-RDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQ--KNLISWNSMIS 229
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
AR L A LF+ M +R++ISW++M+ G CG M+ A +
Sbjct: 230 GYARSEEGLRV-------------AWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLF 276
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
++M +++ V+W M+ GY K GE+ A+ +FDE+ E D AM YVQNG+ A+
Sbjct: 277 NQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALN 336
Query: 232 MY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+ ++ ++ + ++ +SA QLG + L ++++ + + ALI M+
Sbjct: 337 FFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMY 396
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG +D A F I +K + ++++I A HG + A ++F++M ++P+ +TFI
Sbjct: 397 AKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFI 456
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
GVL AC+H GLV++G FELM RV ++P +H CMVD+LGR+G +E+A +
Sbjct: 457 GVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPI 516
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
+ W LL AC+ H N +GE A+HL+ + + LL+NIYA G W D +
Sbjct: 517 EPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRI 576
Query: 471 KMMISETEKKKSPGCSWI 488
+MM+ + + KK PGCS I
Sbjct: 577 RMMMKQRDLKKIPGCSQI 594
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 214/458 (46%), Gaps = 54/458 (11%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQF-------LIRLLQLPGDNLSYAR 56
L+P+SKT + + Q+HS L+ T + P F L+ + L +R
Sbjct: 20 LLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARY----LFMSR 75
Query: 57 QVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV 116
+ K FLW ++I++ R++ +++ M GV F+FS VL AC+R+
Sbjct: 76 HFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRL 135
Query: 117 PSLLEAV----ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ E + + G +IG +V + ++ Y CG + A++ +D
Sbjct: 136 GLIKEGMQIHGLLGRMEIG--------------SDVFLQNCLMCLYLRCGCLGIARQLFD 181
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFD--EISEPDASCWAAMTVCYVQNGYA-KAA 229
RM +++SV++ +MI GY K G V+ A+++FD + + + W +M Y ++ + A
Sbjct: 182 RMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVA 241
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA-LIH 288
E+++ M + ++ ++ I C + G +E A L + + + VS A ++
Sbjct: 242 WELFEEMPKRDL----ISWNSMIDGCVKCGKMENAHHLFNQM-----PKRDVVSWANMVD 292
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM--RNEGIEPNQ 346
++K G +D+A F + +DVIS ++M+ + +G EAL+ F M R E + P+
Sbjct: 293 GYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKE-LFPDN 351
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL-TCMVDLLGRSGQLEKAHSLI 405
T + L+A + G ++G G L+E L ++D+ + G ++ A S+
Sbjct: 352 ATLLITLSAIAQLGHFDEGV-ALHCYIEDNGFS-LSEKLGVALIDMYAKCGSIDNALSVF 409
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
D D W A++G +H LGE+A +E+
Sbjct: 410 EDIDD-KSIDHWNAIIGGLAIH---GLGEVAFELFMEM 443
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 242/437 (55%), Gaps = 14/437 (3%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL--GVLTSGFTFSSVLNACAR 115
VF QIP L ++I+ + + R ++ +Y +M R T+GF+
Sbjct: 64 VFAQIPAPNLH-LHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFT---- 118
Query: 116 VPSLLEAVICGY---TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
P LL+A CG +++G A + S E + + ++++ Y CG++ A++ +D
Sbjct: 119 YPFLLKA--CGALAASRLGRQVHAH-VARSGCESHAVVQNSLIEMYTRCGDLSTARKAFD 175
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
M EK+ V+W +I+ + + G++R A+++F + + W A+ Y G A+E+
Sbjct: 176 GMREKDVVSWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEV 235
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+++M+ E +V++V + AC QLG +E+ + + + Y+ NAL+ M++K
Sbjct: 236 FRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAK 295
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIG 351
CG ++ A + F + KDVIS+S+ I A HG+++EA+ +F M EG + PN +TF+G
Sbjct: 296 CGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVG 355
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+L+ACSH GLV++G + + M +G++P EH C+VDLLGRSG++++A I
Sbjct: 356 LLSACSHAGLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVP 415
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D WG+LL AC+ H + E +AA L+EL P GN +LAN+Y + G+W + +
Sbjct: 416 PDGKIWGSLLSACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTR 475
Query: 472 MMISETEKKKSPGCSWI 488
I +K+PGCS I
Sbjct: 476 KEIRSRSTRKTPGCSMI 492
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 257/494 (52%), Gaps = 60/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR-----LGVLTSGFTFSSV 109
A ++F+++P+ + W +++ ++++ H ++I + M + L L SG +
Sbjct: 171 AEELFNEMPE-RNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDK 229
Query: 110 LNACARV----------PSLLEA---VICGYTKIGLMDDAQRLFDSM--------AERNV 148
L R+ L++A +I GY + G+ +A++LFD + + RNV
Sbjct: 230 LVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNV 289
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP 208
ISW++M+ Y G++ +A+E +D+M E+++ +W MI+GY + +++EA +F + EP
Sbjct: 290 ISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEP 349
Query: 209 DA-------------------------------SCWAAMTVCYVQNGYAKAAIEMYKVMR 237
D W +M Y +N K A+ ++ M+
Sbjct: 350 DTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQ 409
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
E + + +SAC L D+ + + + V + ++N+L+ M+S+CG +
Sbjct: 410 LEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFIADLP-INNSLVTMYSRCGAIV 468
Query: 298 LAWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
A F + +DVIS+++MI +A HG + EAL +F M+ ++P+ +TFI VL AC
Sbjct: 469 EARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNAC 528
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
+H GL+E+G ++F M GIKP EH +VD++GR GQLE+A SLI D
Sbjct: 529 AHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAV 588
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
WGALLGACKVH N E+ AA L++L PE + LL N+YA +G+W D+ ++ M+ +
Sbjct: 589 WGALLGACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEK 648
Query: 477 TEKKKSPGCSWISS 490
+K G S + S
Sbjct: 649 NNVQKDAGYSRVDS 662
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 203/438 (46%), Gaps = 76/438 (17%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL- 110
++ AR++FD T W +I +V ++ L+ +M +++ S +
Sbjct: 73 INEARELFDSTEHWNT-ITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLSGYIS 131
Query: 111 ----------NACARVPSL----LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
N ++P ++ GY K G+MD A+ LF+ M ERNV+SW+AMV+
Sbjct: 132 CGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVSWNAMVS 191
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVA-------------------------------- 184
GY G+++ A EF+ M +++S + A
Sbjct: 192 GYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQYGGNVGKGDLVD 251
Query: 185 ----MIAGYGKCGEVREAKKVFDEI--------SEPDASCWAAMTVCYVQNGYAKAAIEM 232
+IAGYG+ G EA+K+FD I S + W +M +CYV+ G +A E+
Sbjct: 252 AYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSAREL 311
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M + + + IS Q+ D++ A+ L + E D ++ N +I S+
Sbjct: 312 FDKMVERDT----FSWNTMISGYVQILDMKEASNLFSRMPEP--DTLSW--NMMISGFSE 363
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
G L LA F RI K ++S++SMI+ + + + A+++FL+M+ EG +P++ T +
Sbjct: 364 IGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSI 423
Query: 353 LTACSHGGLVE--DGCKQFELMTRVF-GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
L+AC+ GLV+ G + +L+T+ F P+ L V + R G + +A + +
Sbjct: 424 LSACA--GLVDLVLGTQIHQLVTKAFIADLPINNSL---VTMYSRCGAIVEARMVFDEMN 478
Query: 410 DFCDAGTWGALLGACKVH 427
D +W A++G H
Sbjct: 479 LQRDVISWNAMIGGYAYH 496
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 144/345 (41%), Gaps = 59/345 (17%)
Query: 106 FSSVLNACARVPSL--LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
FSS +VP L I + G +++A+ LFDS N I+W+ M+ Y
Sbjct: 44 FSSSKANSFQVPEFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRRE 103
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE--VREAKKVFDEISEPD------------ 209
M A++ ++ M ++ V+W M++GY CG V A+ +FD++ E D
Sbjct: 104 MLKARQLFEEMPNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYA 163
Query: 210 -------------------ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
W AM Y+ NG+ + AIE +K+M + + S A++
Sbjct: 164 KSGMMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRD-SASLRALIS 222
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRI-- 306
+ +L VE IL ++ G + + V N LI + + G A + F RI
Sbjct: 223 GLIQNDKL--VEAERILLQY--GGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPL 278
Query: 307 ------KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
++VIS++SMI + G A ++F KM +E + ++ +++
Sbjct: 279 CCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKM----VERDTFSWNTMISGYVQIL 334
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+++ F M +P T M+ G L+ AH L
Sbjct: 335 DMKEASNLFSRMP-----EPDTLSWNMMISGFSEIGSLKLAHDLF 374
>gi|297599623|ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group]
gi|125582938|gb|EAZ23869.1| hypothetical protein OsJ_07586 [Oryza sativa Japonica Group]
gi|255671102|dbj|BAF09391.2| Os02g0625100 [Oryza sativa Japonica Group]
Length = 493
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 228/415 (54%), Gaps = 28/415 (6%)
Query: 95 HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGL---------------------M 133
HRL L + S L+ C+R+PS A + + L +
Sbjct: 65 HRL--LPDHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADV 122
Query: 134 DDAQRLFDSMAERNV---ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
A+RLF S A R+V ++W+ MV G+AN G+++ A+ F+D M EKN V+W M+ Y
Sbjct: 123 ASAERLF-SEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAYA 181
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ G + +A+K+FD + +A+ W +M +Q+ + + A+ ++ M V +E A+V
Sbjct: 182 RAGMLPKARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVASGVVPNEPALVS 241
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIKNK 309
+SACTQL +E + + + + V + A++ M+ KCG + A R F+ + +
Sbjct: 242 TVSACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCGSIRDAVRVFAAMPVR 301
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
++ S++SMI A +G ++AL +F KM+ G+ PN +TFIG+L+ACSH GLV++G F
Sbjct: 302 NIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLF 361
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M FGI+P+ EH MVDLLGRSG + +A + G WGAL GACK+H
Sbjct: 362 YKMVNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVEPHPGLWGALAGACKIHGE 421
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
ELGE A+ L+EL P+ LL+NIYA+ +W D V+ ++ + + K G
Sbjct: 422 VELGEEVAKKLIELEPQHGSRYILLSNIYATSNRWDDMANVRRILKDRKVPKGTG 476
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD++P + W S+I + H +++ +++ M GV+ + S ++
Sbjct: 186 LPKARKLFDRMPS-RNAATWGSMITGLLQSDHCEEALRVFSDMVASGVVPNEPALVSTVS 244
Query: 112 ACARV----------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC ++ L A++ Y K G + DA R+F +M RN+
Sbjct: 245 ACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCGSIRDAVRVFAAMPVRNIY 304
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
SW++M+AG A G+ + A + +M N +T++ +++ G V E + +F ++
Sbjct: 305 SWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLFYKM 364
Query: 206 S-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS-ACTQLG 259
+P + M ++G+ + A++ K M E + GA++ AC G
Sbjct: 365 VNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVE----PHPGLWGALAGACKIHG 420
Query: 260 DVEMAAILAKHVDE 273
+VE+ +AK + E
Sbjct: 421 EVELGEEVAKKLIE 434
>gi|242059435|ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
gi|241930838|gb|EES03983.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
Length = 544
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 217/370 (58%), Gaps = 7/370 (1%)
Query: 123 VICGYTKIGLMDDAQRLFDSMAE--RNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+I G+ K G M +A+R F++ R V++W+ +V GY + G+M+AA+E +DRM +N+
Sbjct: 159 LIRGFAKKGDMAEARRWFETTPPGMRTVVTWTVLVHGYVSAGDMEAAREVFDRMPARNAF 218
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W +M+ GY K G EA+ VF I + W A+ Y Q G ++ A+E + M QE
Sbjct: 219 VWSSMVTGYFKAGNAEEAQAVFHRIPTRNLVNWNALIAGYAQIGCSEKALEAFDSMLQER 278
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V+ E M +SAC QLG +E + ++ + ++V N LI M++KCG L A
Sbjct: 279 VKPDEFTMASLLSACAQLGSLEQGKKVHDFINREHIRKNHFVLNGLIDMYAKCGDLVYAR 338
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F ++ K+ +++MI+A A HG+S EAL +F +M + G PN +T + VL AC+HGG
Sbjct: 339 YIFDGMRWKNTECWNTMISALASHGRSDEALHLFFQMEHSGQTPNTITVLAVLGACTHGG 398
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
V++G + F + +G++ EH C+VDLLGR+G+L++A+ ++ + + + WG+L
Sbjct: 399 FVDEGLRIFNKLD-AYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVKNMPEEPNEVIWGSL 457
Query: 421 LGACKVHVNAELGEIAARHLLEL-GPEKTGNSA---LLANIYASMGKWKDSEIVKMMISE 476
LGAC+VH +AE+ + + L + N A +L+NI A+ +W+ +E ++ ++
Sbjct: 458 LGACRVHGDAEMSRLVTDEIHRLHSVHASSNDAEYIMLSNIMAASKRWEQAEQIRRKMAR 517
Query: 477 TEKKKSPGCS 486
+K+P CS
Sbjct: 518 HGVEKTPACS 527
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 157/506 (31%), Positives = 249/506 (49%), Gaps = 62/506 (12%)
Query: 43 RLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTS 102
R+ +L + AR++FD++ + W S+I +V + + + L+ +M LG+ T
Sbjct: 192 RMRELGIRRVESARKLFDELGD-RDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTD 250
Query: 103 GFTFSSVLNACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFD 141
T SV+ C+ LL ++ Y+K G ++ A ++F+
Sbjct: 251 LATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFE 310
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN------SVTWV------------ 183
+M ER+V+SW++M+AGYA G + + M ++ ++T +
Sbjct: 311 TMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLEN 370
Query: 184 ---------------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
A++ Y KCG + +A VF E+ D W M Y +
Sbjct: 371 GKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSK 430
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
N A+ ++ M Q N + + + M + AC L +E + H+ +V
Sbjct: 431 NSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHV 489
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
+NAL+ M+ KCG L LA F I KD++S++ MI + HG EA+ F +MRN GI
Sbjct: 490 ANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGI 549
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
EP++V+FI +L ACSH GL+++G F +M I+P +EH C+VDLL R+G L KA+
Sbjct: 550 EPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAY 609
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
I DA WGALL C+++ + +L E A H+ EL PE TG LLANIYA
Sbjct: 610 KFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAE 669
Query: 463 KWKDSEIVKMMISETEKKKSPGCSWI 488
KW++ + ++ I +K+PGCSWI
Sbjct: 670 KWEEVKKLRERIGRRGLRKNPGCSWI 695
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 186/418 (44%), Gaps = 78/418 (18%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L R++FD++ K FLW L+ + +FR+S+ L+ +M LG+
Sbjct: 151 DLREGRRIFDKVANEKV-FLWNLLMNGYAKIGNFRESLSLFKRMRELGI----------- 198
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
RV S A++LFD + +R+VISW++M++GY + G + +
Sbjct: 199 ---RRVES-----------------ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDL 238
Query: 171 YDRM----TEKNSVTWVAMIAG-----------------------------------YGK 191
+++M + T V+++AG Y K
Sbjct: 239 FEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSK 298
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
G + A +VF+ + E W +M Y + G + ++ ++ M +E + +
Sbjct: 299 SGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTI 358
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ AC G +E + ++ E +VSNAL+ M++KCG + A FS ++ KD+
Sbjct: 359 LHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDI 418
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK-QFE 370
+S+++MI ++ + EAL++F++M+ +PN +T +L AC+ +E G +
Sbjct: 419 VSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGH 477
Query: 371 LMTRVFGIKPLTEHL-TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++ F L H+ +VD+ + G L A L+ D D +W ++ +H
Sbjct: 478 ILRNGFS---LDRHVANALVDMYLKCGALGLAR-LLFDMIPEKDLVSWTVMIAGYGMH 531
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 161/348 (46%), Gaps = 52/348 (14%)
Query: 105 TFSSVLNACA---------RVPSLLEA------------VICGYTKIGLMDDAQRLFDSM 143
T+ SVL CA R+ S++++ ++ Y G + + +R+FD +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 144 AERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFD 203
A V W+ ++ GYA GN + + + RM E V A+K+FD
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELG-------------IRRVESARKLFD 209
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
E+ + D W +M YV NG ++ +++++ M + MV ++ C+ G + +
Sbjct: 210 ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLL 269
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
L + + + ++N L+ M+SK G L+ A + F + + V+S++SMI +A
Sbjct: 270 GRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAR 329
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG------CKQFELMTRVFG 377
G S ++ +F +M EGI P+ T +L AC+ GL+E+G K+ ++ + +F
Sbjct: 330 EGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFV 389
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGA 423
L +D+ + G + AHS+ M KD +W ++G
Sbjct: 390 SNAL-------MDMYAKCGSMGDAHSVFSEMQVKDIV---SWNTMIGG 427
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 234/435 (53%), Gaps = 16/435 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A+++FD++P + W +I + + +++ L ++HR G+L S + +S+ AC+
Sbjct: 372 AKELFDKMP-FRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACS 430
Query: 115 RVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ +L V K+G + N + +A++ Y C NM+ A++ +
Sbjct: 431 NIVALETGTQVHSLAVKVG------------CQFNSFACNALITMYGKCRNMEYARQVFS 478
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
RM K+ V+W + +A + + EA+ FD + D W + Y + A+
Sbjct: 479 RMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGA 538
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+K M E+ + + + C LG ++ + + D V+NALI M+ K
Sbjct: 539 FKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFK 598
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG D + R F ++ +D+ +++++IT +A HG +EA+ M+ M + G+ PN+VTF+G+
Sbjct: 599 CGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGL 657
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L ACSH GLV++G K F+ M++ +G+ PL EH CMVDLLGR+G ++ A I D
Sbjct: 658 LNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEP 717
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
D W ALLGACK+H NAE+G+ AA L + P GN +L+NIY+S+G W + V+
Sbjct: 718 DTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRK 777
Query: 473 MISETEKKKSPGCSW 487
++ + K PGCSW
Sbjct: 778 IMKQQGVIKEPGCSW 792
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 170/371 (45%), Gaps = 58/371 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +F+++P+ + WT +I + + ++ ++ KMHR G+L F+S L+A
Sbjct: 177 ARNLFEKMPE-RNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVK 235
Query: 115 RVPSL--LEAVICGYTKIG--------------------LMDDAQRLFDSMAERNVISWS 152
+ +L LE++ K G ++D A + F+SM ERN +WS
Sbjct: 236 GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWS 295
Query: 153 AMVA-------------------------------GYANCGNMKAAKEFYDRMTEKNSVT 181
M+A G A CG + A+ ++++ E V+
Sbjct: 296 TMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVS 355
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W A+I GY + G V EAK++FD++ + WA M Y QNG ++ A+ + + + + +
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
S ++ AC+ + +E + + C ++ NALI M+ KC ++ A +
Sbjct: 416 LPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQ 475
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
FSR+ KD++S++S + A + EA + F M + + V++ +++A +H
Sbjct: 476 VFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQ 531
Query: 362 VEDGCKQFELM 372
+ F+ M
Sbjct: 532 SNEAMGAFKTM 542
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 45/230 (19%)
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
++G + +A+ +FD+M R++I+W++M++ Y + G AA++ YD ++ N T +++G
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
YG+ G V EA++VFD + E + W AM CYVQNG A ++ M +V +
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSML 165
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
G C L V+ A F ++
Sbjct: 166 TG---YCHSLQMVD------------------------------------ARNLFEKMPE 186
Query: 309 KDVISYSSMITAFA---DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
++++S++ MI+ + +HGK A D+F KM EG+ P+Q F L+A
Sbjct: 187 RNLVSWTVMISGYGRIENHGK---AWDIFCKMHREGLLPDQSNFASALSA 233
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 172/374 (45%), Gaps = 38/374 (10%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD +P+ + W S+I + + + LY ++
Sbjct: 53 AREVFDAMPR-RDIIAWNSMISAYCHNGMPDAARDLY---------------DAISGGNM 96
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
R ++L + GY ++G + +A+R+FD M ERN ++W+AM++ Y G++ A+ +D M
Sbjct: 97 RTGAIL---LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
++ +W +M+ GY ++ +A+ +F+++ E + W M Y + A +++
Sbjct: 154 PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK-C 293
M +E + + A+SA LG++++ L + +R + A+++++S+
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
LD A + F + ++ ++S+MI A + G+ A+ ++ E + V I
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY--------ERDPVKSIACR 325
Query: 354 TACSHG----GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
TA G G ++D FE + +P+ ++ ++G + +A L D
Sbjct: 326 TALITGLAQCGRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELF-DKM 379
Query: 410 DFCDAGTWGALLGA 423
F + +W ++
Sbjct: 380 PFRNTISWAGMIAG 393
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 174/412 (42%), Gaps = 75/412 (18%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD + + + W ++I +V + + L+ M +
Sbjct: 115 ARRVFDGMLE-RNTVAWNAMISCYVQNGDITMARRLFDAMP------------------S 155
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
R S +++ GY M DA+ LF+ M ERN++SW+ M++GY N A + + +M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 175 -------TEKNSVTWVAMIAGYG-------------KCGEVRE----------------- 197
+ N + ++ + G G K G R+
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 198 ---AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
A K F+ + E + W+ M G AAI +Y+ ++ V+ S I+
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE---RDPVK-SIACRTALITG 331
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
Q G ++ A IL + + E VS NALI + + G ++ A F ++ ++ IS
Sbjct: 332 LAQCGRIDDARILFEQIPEPIV-----VSWNALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++ MI +A +G+S+EAL + ++ G+ P+ + + ACS+ +E G + L
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGA 423
+V G + + ++ + G+ +E A + M KD +W + L A
Sbjct: 447 KV-GCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV---SWNSFLAA 494
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 19/304 (6%)
Query: 76 RNHVLHAHFRQSIL-LYAKMHRLGVLTSGFTFSSVLNACARVPSLL-EAVICGYTKIGLM 133
R V HAH + A++ LG L V +A R + ++I Y G+
Sbjct: 22 RFAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMP 81
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
D A+ L+D+++ N+ + + +++GY G + A+ +D M E+N+V W AMI+ Y + G
Sbjct: 82 DAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNG 141
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
++ A+++FD + D S W +M Y + A +++ M + N+ +S M+
Sbjct: 142 DITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNL-VSWTVMISGYG 200
Query: 254 ACTQLGDVEMAAILAKHVDEGCC-DRTNYVSNALIHMHSKCGYLDLAWREFSRIK----- 307
G + I K EG D++N+ S + + G +L E R+
Sbjct: 201 RIENHG--KAWDIFCKMHREGLLPDQSNFAS----ALSAVKGLGNLDVLESLRVLALKTG 254
Query: 308 -NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
+DV+ ++++ ++ + LD +K IE N+ T+ ++ A SHGG ++
Sbjct: 255 FERDVVIGTAILNVYS---RDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAI 311
Query: 367 KQFE 370
+E
Sbjct: 312 AVYE 315
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 241/460 (52%), Gaps = 29/460 (6%)
Query: 54 YARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
Y R +FD+I K + +IR++V + ++ ++L++ M G +T+ VL AC
Sbjct: 89 YTRHIFDEITD-KNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKAC 147
Query: 114 ARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+ +L ++ Y K +D A+R+ D M R+++SW+
Sbjct: 148 SVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWN 207
Query: 153 AMVAGYANCGN----MKAAKEFYDRMTEKNSVTWVAMIAGYGK--CGEVREAKKVFDEIS 206
+MVAGYA G +K +E D + ++ T +++ C V K +F ++
Sbjct: 208 SMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLK 267
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
E W M YV N A+++Y M+ V V++ + AC L +
Sbjct: 268 EKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRR 327
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ ++V+ + NALI M++KCG L A F ++ +DV+S++SMI+A+ G+
Sbjct: 328 IHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQ 387
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
++A+ +F KMR+ G P+ + F+ VL ACSH GLV++G F LM +GI P EH
Sbjct: 388 GKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYN 446
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
CMVDLLGR+G++++A+ L + WG+LL AC+V+ + + +AA HL +L PE
Sbjct: 447 CMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPE 506
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
++G LL+NIYA G+W+D E V+ +++ KK PG S
Sbjct: 507 QSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNS 546
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%)
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
+K D+ N + ++ Y CGE + +FDEI++ + + M YV NG
Sbjct: 59 SKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLY 118
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A+ ++K M + + AC+ G++ + + V + D Y+ N L
Sbjct: 119 QDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGL 178
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M+ KC +LD A R + +D++S++SM+ +A +G+ +AL + +M + ++P+
Sbjct: 179 VSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDA 238
Query: 347 VTFIGVLTACSH 358
T +L A ++
Sbjct: 239 GTMGSLLPAVTN 250
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 33/171 (19%)
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ ++ CG F I +K+V+ ++ MI ++ ++G Q+AL +F M N+G P+
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 346 QVTFIGVLTACS-----------HGGLVEDG-----------------CKQFELMTRVFG 377
T+ VL ACS HG +V+ G CK + RV
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196
Query: 378 IKPLTEHLT--CMVDLLGRSGQLEKAHSLIMDYKDF---CDAGTWGALLGA 423
P + ++ MV ++G+ A L + +D DAGT G+LL A
Sbjct: 197 EMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA 247
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 272/512 (53%), Gaps = 35/512 (6%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R++ N + +H+ L+ + H+ A+F+ + AR +FD+IP+ +
Sbjct: 40 RNRDLNFGRSLHARLI--IDGSARLTHFAAKFIA--FYAACGKIKDARILFDKIPRTNPR 95
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA---------RVPSL 119
W LI + ++ +++ ++ ++ R G+ S + SVL AC ++ +L
Sbjct: 96 -RWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHTL 154
Query: 120 L-------EAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
+ +A +C Y K G ++ A+R+F+SMA +++++ +AMV+GYA+ G + A
Sbjct: 155 ILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVALNAMVSGYAHHGLAEEA 214
Query: 168 KEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASCWAAMTVC 219
+ M + N VTW ++ G+ + GE +++F E+ EPD W ++
Sbjct: 215 LNLVEEMQVLGIKPNLVTWNTLVTGFSQIGEEEMVRELFKEMEANGIEPDVVSWTSVISG 274
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
+VQN + A + ++ M + + + AC +G+ + H ++
Sbjct: 275 FVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLPACASVGNGRCGKEIHGHSLALGVEKD 334
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
YV AL+ M++KCGY A F R+ ++ +++SMI +A+HG EA+++F +M++
Sbjct: 335 VYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQMKD 394
Query: 340 EGIEP-NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
+ + + +TF +LTAC+H GLV+ G F+LM +GI P EH CMVD+ GR+G+L
Sbjct: 395 DDEKKLDHLTFTAILTACAHAGLVDLGRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKL 454
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
+A+ LI D WGALLGAC+ H EL E AA+HL EL P GNS LL++IY
Sbjct: 455 AEAYDLIKTMPVKPDLYVWGALLGACRKHGEIELAEEAAKHLSELEPGSVGNSLLLSDIY 514
Query: 459 ASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
A+ G W +K M+ + + KK PGCSWI +
Sbjct: 515 ANAGSWGHVVKLKKMMKKRKMKKFPGCSWIET 546
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 234/435 (53%), Gaps = 16/435 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A+++FD++P + W +I + + +++ L ++HR G+L S + +S+ AC+
Sbjct: 372 AKELFDKMP-FRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACS 430
Query: 115 RVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ +L V K+G + N + +A++ Y C NM+ A++ +
Sbjct: 431 NIVALETGTQVHSLAVKVG------------CQFNSFACNALITMYGKCRNMEYARQVFS 478
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
RM K+ V+W + +A + + EA+ FD + D W + Y + A+
Sbjct: 479 RMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGA 538
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+K M E+ + + + C LG ++ + + D V+NALI M+ K
Sbjct: 539 FKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFK 598
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG D + R F ++ +D+ +++++IT +A HG +EA+ M+ M + G+ PN+VTF+G+
Sbjct: 599 CGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGL 657
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L ACSH GLV++G K F+ M++ +G+ PL EH CMVDLLGR+G ++ A I D
Sbjct: 658 LNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEP 717
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
D W ALLGACK+H NAE+G+ AA L + P GN +L+NIY+S+G W + V+
Sbjct: 718 DTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRK 777
Query: 473 MISETEKKKSPGCSW 487
++ + K PGCSW
Sbjct: 778 IMKQQGVIKEPGCSW 792
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 170/371 (45%), Gaps = 58/371 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +F+++P+ + WT +I + + ++ ++ KMHR G+L F+S L+A
Sbjct: 177 ARNLFEKMPE-RNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVK 235
Query: 115 RVPSL--LEAVICGYTKIG--------------------LMDDAQRLFDSMAERNVISWS 152
+ +L LE++ K G ++D A + F+SM ERN +WS
Sbjct: 236 GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWS 295
Query: 153 AMVA-------------------------------GYANCGNMKAAKEFYDRMTEKNSVT 181
M+A G A CG + A+ ++++ E V+
Sbjct: 296 TMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVS 355
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W A+I GY + G V EAK++FD++ + WA M Y QNG ++ A+ + + + + +
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
S ++ AC+ + +E + + C ++ NALI M+ KC ++ A +
Sbjct: 416 LPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQ 475
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
FSR+ KD++S++S + A + EA + F M + + V++ +++A +H
Sbjct: 476 VFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQ 531
Query: 362 VEDGCKQFELM 372
+ F+ M
Sbjct: 532 SNEAMGAFKTM 542
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 45/230 (19%)
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
++G + +A+ +FD+M R++I+W++M++ Y + G AA++ YD ++ N T +++G
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
YG+ G V EA++VFD + E + W AM CYVQNG A ++ M +V +
Sbjct: 106 YGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSML 165
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
G C L V+ A F ++
Sbjct: 166 TG---YCHSLQMVD------------------------------------ARNLFEKMPE 186
Query: 309 KDVISYSSMITAFA---DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
++++S++ MI+ + +HGK A D+F KM EG+ P+Q F L+A
Sbjct: 187 RNLVSWTVMISGYGRIENHGK---AWDIFCKMHREGLLPDQSNFASALSA 233
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 172/374 (45%), Gaps = 38/374 (10%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD +P+ + W S+I + + + LY ++
Sbjct: 53 AREVFDAMPR-RDIIAWNSMISAYCHNGMPDAARDLY---------------DAISGGNM 96
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
R ++L + GY ++G + +A+R+FD M ERN ++W+AM++ Y G++ A+ +D M
Sbjct: 97 RTGAIL---LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAM 153
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
++ +W +M+ GY ++ +A+ +F+++ E + W M Y + A +++
Sbjct: 154 PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK-C 293
M +E + + A+SA LG++++ L + +R + A+++++S+
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
LD A + F + ++ ++S+MI A + G+ A+ ++ E + V I
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY--------ERDPVKSIACR 325
Query: 354 TACSHG----GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
TA G G ++D FE + +P+ ++ ++G + +A L D
Sbjct: 326 TALITGLAQCGRIDDARILFEQIP-----EPIVVSWNALITGYMQNGMVNEAKELF-DKM 379
Query: 410 DFCDAGTWGALLGA 423
F + +W ++
Sbjct: 380 PFRNTISWAGMIAG 393
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 174/412 (42%), Gaps = 75/412 (18%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD + + + W ++I +V + + L+ M +
Sbjct: 115 ARRVFDGMLE-RNTVAWNAMISCYVQNGDITMARRLFDAMP------------------S 155
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
R S +++ GY M DA+ LF+ M ERN++SW+ M++GY N A + + +M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 175 -------TEKNSVTWVAMIAGYG-------------KCGEVRE----------------- 197
+ N + ++ + G G K G R+
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 198 ---AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
A K F+ + E + W+ M G AAI +Y+ ++ V+ S I+
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE---RDPVK-SIACRTALITG 331
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
Q G ++ A IL + + E VS NALI + + G ++ A F ++ ++ IS
Sbjct: 332 LAQCGRIDDARILFEQIPEPIV-----VSWNALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++ MI +A +G+S+EAL + ++ G+ P+ + + ACS+ +E G + L
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGA 423
+V G + + ++ + G+ +E A + M KD +W + L A
Sbjct: 447 KV-GCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIV---SWNSFLAA 494
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 19/304 (6%)
Query: 76 RNHVLHAHFRQSIL-LYAKMHRLGVLTSGFTFSSVLNACARVPSLL-EAVICGYTKIGLM 133
R V HAH + A++ LG L V +A R + ++I Y G+
Sbjct: 22 RFAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMP 81
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
D A+ L+D+++ N+ + + +++GY G + A+ +D M E+N+V W AMI+ Y + G
Sbjct: 82 DAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNG 141
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
++ A+++FD + D S W +M Y + A +++ M + N+ +S M+
Sbjct: 142 DITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNL-VSWTVMISGYG 200
Query: 254 ACTQLGDVEMAAILAKHVDEGCC-DRTNYVSNALIHMHSKCGYLDLAWREFSRIK----- 307
G + I K EG D++N+ S + + G +L E R+
Sbjct: 201 RIENHG--KAWDIFCKMHREGLLPDQSNFAS----ALSAVKGLGNLDVLESLRVLALKTG 254
Query: 308 -NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
+DV+ ++++ ++ + LD +K IE N+ T+ ++ A SHGG ++
Sbjct: 255 FERDVVIGTAILNVYS---RDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAI 311
Query: 367 KQFE 370
+E
Sbjct: 312 AVYE 315
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 239/441 (54%), Gaps = 18/441 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A++VFD +P+ + W SLI + + +++ L+ +M + G + T +SV++ACA
Sbjct: 201 AQKVFDAMPE-RNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACA 259
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+ + E G M + R + M N A+V YA CG AK +DRM
Sbjct: 260 GLAAGRE----GRQVHTRMVKSDRFREDMVLNN-----ALVDMYAKCGRTWEAKCVFDRM 310
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
++ V+ +MI GY K V +A+ VF ++ E + W + Y N + A+ ++
Sbjct: 311 AIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFV 370
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV-------DEGCCDRTNYVSNALI 287
+++E+V + ++AC L ++++ HV D G + +V N+L+
Sbjct: 371 RLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGP-ESDVFVGNSLV 429
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+ K G + + F R+ +D +S+++MI +A +G++++AL +F +M P+ V
Sbjct: 430 DMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSV 489
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
T IGVL+AC H GLV++G + F+ MT GI P +H TCM+DLLGR+G L++ LI +
Sbjct: 490 TMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIEN 549
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
DA W +LLGAC++H N ++GE AA L EL P+ +G LL+N+YA +GKW D
Sbjct: 550 MPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADV 609
Query: 468 EIVKMMISETEKKKSPGCSWI 488
V+ + K PGCSWI
Sbjct: 610 FRVRRSMKHRGVSKQPGCSWI 630
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 123/249 (49%), Gaps = 6/249 (2%)
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
+ +++ YA G++ A+ +D M +N+ ++ A+++ + G +A +F I +PD
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
+ A+ Q+G A+ M ++ ++ + A+SAC + V
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+ Y+ AL+ M++KC + A + F + ++++S++S+IT + +G EAL
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEAL 233
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL---TCM 388
+F++M +G P++VT V++AC+ GL G + ++ TR+ E + +
Sbjct: 234 ALFVRMMKDGFVPDEVTLASVMSACA--GLAA-GREGRQVHTRMVKSDRFREDMVLNNAL 290
Query: 389 VDLLGRSGQ 397
VD+ + G+
Sbjct: 291 VDMYAKCGR 299
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 182/454 (40%), Gaps = 103/454 (22%)
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL-TSGFTFSSVLNACARVPSLLEAVIC 125
+ F + + N +L A+ R L A+ G+ + F+++++L+ACAR
Sbjct: 44 SPFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACAR---------- 93
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----------- 174
+G DDA LF ++ + + S++A+VA A G A F M
Sbjct: 94 ----LGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYS 149
Query: 175 ---------TEKNSVTW-------------------VAMIAGYGKCGEVREAKKVFDEIS 206
+EK S T A++ Y KC EA+KVFD +
Sbjct: 150 FASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMP 209
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL-GDVEMAA 265
E + W ++ CY QNG A+ ++ M ++ EV + +SAC L E
Sbjct: 210 ERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQ 269
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
+ + V ++NAL+ M++KCG A F R+ + V+S +SMIT +A
Sbjct: 270 VHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSA 329
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+A +FL+M +E N V + ++ +H E+ + F + R + P T +
Sbjct: 330 NVGDAQAVFLQM----VEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRE-SVWP-THY- 382
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL---- 441
T+G +L AC N +LG+ A H+L
Sbjct: 383 ------------------------------TYGNVLNACANLANLQLGQQAHVHVLKEGF 412
Query: 442 --ELGPEK---TGNSALLANIYASMGKWKDSEIV 470
+ GPE GNS L ++Y G D V
Sbjct: 413 RFDSGPESDVFVGNS--LVDMYLKTGSISDGAKV 444
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 258/487 (52%), Gaps = 52/487 (10%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N S+A + D IPK QF + + + Q I++Y+ + L S T S
Sbjct: 82 NRSFAFRHTDLIPK---QFKRFNTNKGCCIFREASQFIVVYSIVQSLVFAISSCTSVSYC 138
Query: 111 NAC-ARVPSLL--------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
+A ARV L + ++ Y K+G +DAQRLFD M ++++SW+++++G +
Sbjct: 139 SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGR 198
Query: 162 GNMKAAKEFYDRMT-----EKNSVTWVAMIAG---------------------------- 188
G + A + RM + N VT +++++
Sbjct: 199 GYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKV 258
Query: 189 -------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
YGK G + A ++F+E+ W +M V + NGYA+ ++++ +M++ +
Sbjct: 259 VNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGI 318
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ MV + ACT G A + ++ + ++ AL+++++K G L+ +
Sbjct: 319 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 378
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F IK++D I++++M+ +A H +EA+ +F M EG+E + VTF +L+ACSH GL
Sbjct: 379 IFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 438
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
VE+G K FE+M+ V+ ++P +H +CMVDLLGRSG+LE A+ LI +G WGALL
Sbjct: 439 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 498
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC+V+ N ELG+ A LL L P N +L+NIY++ G W+D+ V+ ++ E +
Sbjct: 499 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTR 558
Query: 482 SPGCSWI 488
+PGCS+I
Sbjct: 559 NPGCSFI 565
>gi|242051158|ref|XP_002463323.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
gi|241926700|gb|EER99844.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
Length = 576
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 260/514 (50%), Gaps = 33/514 (6%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ R ++ +KQ+H+ LL +P H+ ++ L Y + P
Sbjct: 20 LLSRCRSLAAVKQLHANLLARSNRPFPYNHFLSKLLSLSSSSSAAAADYVLLLLSSHP-A 78
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS------- 118
T F + +R + S+ L+ M R + +T +L A AR PS
Sbjct: 79 PTAFSYNVALR-FFASSRPDTSLRLFLSMLRAELRPDAYTLPFLLLAAARCPSPAVARSA 137
Query: 119 --------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA----- 159
+ ++I Y+ +G A+R+FD + R+V+SW++++ Y
Sbjct: 138 HAFLEKLGLRDHDHTVHSLITMYSCLGDHLTARRVFDGIPHRDVVSWNSIMKAYERAACR 197
Query: 160 NCGNMKAAK--EFYDRMT--EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
+ GN+ K E + R E +S+ A++ Y KCGE+ EA++VFD IS D W A
Sbjct: 198 DAGNLVLGKWVEEWVRSAGMEVDSLIGSALVGMYEKCGEMEEARRVFDGISNKDVVAWNA 257
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
M Y QNG + AI ++ MR+ +R ++ +VG +S+C +G +E+ L +
Sbjct: 258 MITGYAQNGMSNEAIALFHSMREAGLRPDKITLVGVLSSCAAVGALELGVELDGYALHRG 317
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
YV AL+ M++KCG L+ A F ++ K+ S++++I A +G+ +A+ F
Sbjct: 318 LYSNVYVGTALVDMYAKCGDLEKATYVFGKMPFKNEASWNALICGLAFNGRGYDAIQQFE 377
Query: 336 KMRNE-GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
MRNE G++P+ +TFIGVL+AC H GL+E G + F +T VF I P EH +C+VDLL R
Sbjct: 378 LMRNEKGLQPDDITFIGVLSACVHAGLLEYGRRLFSSLTPVFKIIPKIEHYSCIVDLLAR 437
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+G LE A I DA GALL AC+ NAE+GE +++L P + N +
Sbjct: 438 AGHLEAAWDFIEKMPGKVDAVMLGALLAACRKCKNAEVGEKVINRIMKLEPTNSWNYVVS 497
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ IYA+ K +S + ++ E K+PGCSW+
Sbjct: 498 SKIYATSDKMDESARMIGLMRERGVNKTPGCSWV 531
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 141/470 (30%), Positives = 259/470 (55%), Gaps = 26/470 (5%)
Query: 12 TFNQLKQVHSYLL-KTLTKPHDQYHYYAQFLIRLLQL-PGDNLSYARQVFDQIPKCKTQF 69
T Q KQ+H++ + LT+ + Y + ++ P + YA +F +P F
Sbjct: 36 TMKQTKQIHAHAIANNLTR----FSYISSRILAFFAASPRGDFRYAETLFTHMPNPNI-F 90
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
+ S+I ++ ++ F +S+ ++ KM + + + TF++++ +C + SL E V K
Sbjct: 91 DYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSL-EQVFTLTMK 149
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
G D + S+++ ++ G + A++ +D + +N V W ++++GY
Sbjct: 150 SGNSSDVYFV------------SSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGY 197
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-----VRIS 244
CG V E + VFD++ + + + +AM YV+N + +++++ +++++ V+ +
Sbjct: 198 CSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFN 257
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+V ++ACT +G E + +V+E + + ALI ++KCG++ A + F
Sbjct: 258 GALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFD 317
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
++ KDV ++S+MI A +G ++ AL++F KM G +PN+VTF+GVLTAC+H L +
Sbjct: 318 KMLVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGE 377
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
+ F +M+ + I P EH C+VD+L RSGQ++KA I D WG+LL C
Sbjct: 378 SSRLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGC 437
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SEIVKMM 473
+H + ELG+ ++L+E PE +G LLAN+YA+MGKW+ SE+ K+M
Sbjct: 438 LMHGHYELGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLM 487
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 263/494 (53%), Gaps = 22/494 (4%)
Query: 1 MTSKYLVPR--SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQV 58
M+S ++ P + ++KQ HS LL+ L + + F L GD ++YA ++
Sbjct: 1 MSSCWVPPPWACSSMAEVKQQHSLLLR-LGLSTNNHAMSRIFTFCSLSKHGD-INYALKL 58
Query: 59 FDQIPKCKTQFLWTSLIRNHV-LHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
F +P T FL+ +L + L S+L Y+ M + V + FTF S++ AC ++
Sbjct: 59 FTTLPNPDT-FLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRAC-KLE 116
Query: 118 SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
+ + K G D L + ++ Y G++ A+ + M++
Sbjct: 117 EEAKQLHAHVLKFGFGGDTYAL------------NNLIHVYFAFGSLDDARRVFCTMSDP 164
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
N V+W ++++GY + G V EA +VF+ + + ++ W AM C+V+ + A +++ M
Sbjct: 165 NVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRM 224
Query: 237 RQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
R E + + +SACT +G +E + K+V++ + ++ +I M+ KCG
Sbjct: 225 RVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGC 284
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLT 354
LD A+ F +K K V S++ MI FA HGK ++A+ +F +M E + P+ +TF+ VLT
Sbjct: 285 LDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLT 344
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC+H GLVE+G F M V GI P EH CMVDLL R+G+LE+A +I + DA
Sbjct: 345 ACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDA 404
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
GALLGAC++H N ELGE ++EL PE +G +L N+YAS GKW+ V+ ++
Sbjct: 405 AVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLM 464
Query: 475 SETEKKKSPGCSWI 488
+ KK PG S I
Sbjct: 465 DDRGVKKEPGFSMI 478
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 251/481 (52%), Gaps = 43/481 (8%)
Query: 30 PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSI 88
PH H Y L L + G L A ++ D +P + + ++I + H +++
Sbjct: 91 PHKNAHSYNSLLAALARGRG-TLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEAL 149
Query: 89 LLYAKMHR---LG---VLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFD- 141
++A++ R LG V FT S +ACA + DA+ L +
Sbjct: 150 RVFAQLARDRGLGQQQVAIDRFTVVSAASACAG-----------------LRDARHLREL 192
Query: 142 ------SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
S E VI +AMV Y+ G ++ A+ +D+MT ++SV+W +MIAGY + +
Sbjct: 193 HGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASML 252
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
+A +VFD + DA W A+ + QNG + A+E+++ M E V + A+V + AC
Sbjct: 253 DDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGAC 312
Query: 256 TQLGDVEMAA-----ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
++G V IL + + G ++ NALI M+SKCG + A F R+ +D
Sbjct: 313 AKVGLVARGKEVHGFILRRSI--GSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERD 370
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+IS++SM+T F+ +G+ +++L +F +M + ++P VTF+ VLTACSH GLV DG + E
Sbjct: 371 IISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILE 430
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD---FCDAGTWGALLGACKVH 427
M G++P EH +D LGR+ QLE+A I G+WGALLGAC VH
Sbjct: 431 SMQD-HGVEPRAEHYAAFIDALGRNHQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVH 489
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N E+ E A L +L PE +G +L+NIY++ G+W D+ V+ ++ +K SW
Sbjct: 490 GNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSW 549
Query: 488 I 488
I
Sbjct: 550 I 550
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 235/426 (55%), Gaps = 14/426 (3%)
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV 123
K T +TS I H + L + M G+L + T S+ L AC R SL A+
Sbjct: 83 KDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPAC-RGLSLGRAL 141
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
K+ L D+ +A+++ YA G+ AA+ +D M + + V+
Sbjct: 142 HAYAFKLALSGDSY------------VATALLSMYARAGDAAAARALFDEMPDPHVVSVT 189
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
AM+ Y G + +A+++FD + D CW AM Y Q+G A+++++ M + +
Sbjct: 190 AMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEP 249
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSNALIHMHSKCGYLDLAWRE 302
EV +V +SA QLG VE L +V C + N V+ AL+ M+ KCG L+ A
Sbjct: 250 DEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAV 309
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F I NKD++ +++MI +A HG S++AL+MF+++R++G+ P +TFIG+L ACSH GLV
Sbjct: 310 FHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLV 369
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G F+ M +GI P EH CMVDLLGR+G +E+A L+ DA W +LL
Sbjct: 370 EEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLA 429
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H N LG+ A L+ G +G LL+NIYA++GKW++ V+ M+ + +K
Sbjct: 430 ACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKE 489
Query: 483 PGCSWI 488
PGCS I
Sbjct: 490 PGCSAI 495
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 257/494 (52%), Gaps = 61/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++F+++P + WT+LI + + +++LL+ KM G++ +S+L AC
Sbjct: 186 ARRMFEEMPD-RDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACG 244
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
R+ ++ AVI Y K G +A R+F M +V+SWS
Sbjct: 245 RLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWST 304
Query: 154 MVAGYA-NC-------------------------------GNM---KAAKEFYDRMTEK- 177
++AGY+ NC G + K KE ++ + ++
Sbjct: 305 LIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEG 364
Query: 178 ---NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+ V A+I Y CG ++EA+ +F+ S+ D W +M V Y G ++A ++
Sbjct: 365 LMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFR 424
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
+ R + + +V + CTQ+G + + +V + V N+LI M+SKCG
Sbjct: 425 RIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCG 484
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+L+L + F ++ ++V +Y++MI+A HG+ ++ L + +M+ EG PN+VTFI +L+
Sbjct: 485 FLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLS 544
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GL++ G + M +GI+P EH +CMVDL+GR+G L+ A+ I DA
Sbjct: 545 ACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDA 604
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
+G+LLGAC++H EL E+ A +L+L + +G+ LL+N+YAS +W+D V+ MI
Sbjct: 605 NVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMI 664
Query: 475 SETEKKKSPGCSWI 488
+ +K PG SWI
Sbjct: 665 KDKGLEKKPGSSWI 678
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 113 CARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
C S ++ Y G + A F ++ + +I+W+A++ G G+ A FY
Sbjct: 63 CPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYH 122
Query: 173 RM--------------------------------------TEKNSVTWVAMIAGYGKCGE 194
M T+ N A+I + KCG
Sbjct: 123 SMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGS 182
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V +A+++F+E+ + D + W A+ + NG A+ +++ MR E + V + + A
Sbjct: 183 VEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPA 242
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C +L V++ L + YVSNA+I M+ KCG A R FS + DV+S+
Sbjct: 243 CGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSW 302
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
S++I ++ + QE+ +++ M N G+ N + VL A L++ G
Sbjct: 303 STLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQG 353
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 115/522 (22%), Positives = 209/522 (40%), Gaps = 75/522 (14%)
Query: 1 MTSKYLVPRSKTFNQLKQVHSYLLK----TLTKPHDQYHYYAQFLIRLLQLPGDNLSYAR 56
+TS + + ++ + +H+ LL T PH +A L+ + G +L +A
Sbjct: 31 VTSFHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSS--FASQLVNVYVNFG-SLQHAF 87
Query: 57 QVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV 116
F +P K W +++R V HF ++I Y M + GV +T+ VL AC+ +
Sbjct: 88 LTFRALPH-KPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSL 146
Query: 117 PSLLE--------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
+L AVI + K G ++DA+R+F+ M +R++ SW+A++
Sbjct: 147 HALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALIC 206
Query: 157 G--------------------------------YANCGNMKAAKEFYDRMT-------EK 177
G CG ++A K E
Sbjct: 207 GTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFES 266
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
+ A+I Y KCG+ EA +VF + D W+ + Y QN + + ++Y M
Sbjct: 267 DLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMI 326
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
+ + + + A +L ++ + V + V +ALI M++ CG +
Sbjct: 327 NVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIK 386
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A F +KD++ ++SMI + G + A F ++ PN +T + +L C+
Sbjct: 387 EAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICT 446
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC--DAG 415
G + G + +T+ G+ ++D+ + G LE + +K +
Sbjct: 447 QMGALRQGKEIHGYVTKS-GLGLNVSVGNSLIDMYSKCGFLELGEKV---FKQMMVRNVT 502
Query: 416 TWGALLGACKVHVNAELGEIAARHLLELG--PEKTGNSALLA 455
T+ ++ AC H E G + E G P K +LL+
Sbjct: 503 TYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLS 544
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 271/539 (50%), Gaps = 66/539 (12%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVFDQIPKCK 66
R+ +Q K++ S++ L KP+D + + RLL L +S+AR++FD++ + +
Sbjct: 34 RASDVDQAKRLKSHMHLHLFKPNDTFIHN-----RLLNLYAKSGEISHARKLFDEMTQ-R 87
Query: 67 TQFLWTSLIRNHV-------LHAHF-----RQSIL-------------------LYAKMH 95
F W +++ + L F R S+ ++ +M
Sbjct: 88 DNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEA-------VICG--------------YTKIGLMD 134
+ G+ + +T SVLNAC ++ L +IC Y + G +D
Sbjct: 148 KEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN----SVTWVAMIAGYG 190
A+RLFD M RNV++W+ M++GY + + + M N VT +++ Y
Sbjct: 208 QARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYI 267
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ G + EA+KVF EI E D CW M V QNG + A+ ++ M EN R +
Sbjct: 268 QAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISS 327
Query: 251 AISACTQLGDVEMAAIL-AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+S+C +L + ++ K G D VS+AL+ M+ KCG AW FS ++ +
Sbjct: 328 VVSSCAKLASLYHGQVVHGKAFLMGVNDDL-LVSSALVDMYCKCGVTRDAWTIFSTMQTR 386
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+V+S++SMI +A +G+ EAL ++ M E ++P+ VTF+GVL+AC H GLVE+G + F
Sbjct: 387 NVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYF 446
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M+ G++P +H CMV+L GRSG ++KA LI ++ W +L C + +
Sbjct: 447 CSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGD 506
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ GE+AAR L+EL P +L+N+YA+ G+WKD ++ ++ KK SWI
Sbjct: 507 IKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWI 565
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 242/470 (51%), Gaps = 64/470 (13%)
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA 122
P+ T + +TSL+++ + L+A+ + LG+ + + +++ A SLL
Sbjct: 42 PQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLL-- 99
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT------- 175
+A+ LFD + ++N+ W+ ++ GYA G A Y +M
Sbjct: 100 ------------NARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPD 147
Query: 176 --------------------------------EKNSVTWVAMIAGYGKCGEVREAKKVFD 203
E++ A+I Y KCG V +A +VFD
Sbjct: 148 NFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFD 207
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS-----ACTQL 258
+I DA W +M Y QNG+ +I + + M VR +E +V IS AC
Sbjct: 208 KIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPY 267
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G E+ +H + + V ALI M++KCG + +A F R++ K V+S++++I
Sbjct: 268 GR-EIHGFGWRHGFQS----NDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAII 322
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
T +A HG + ALD+F KMR E P+ +TF+GVL ACS G L+++G + LM R +GI
Sbjct: 323 TGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGI 381
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P +H TCM+DLLG GQL++A+ LI + D+G WGALL +CK+H N EL E+A
Sbjct: 382 TPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALE 441
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+EL P+ +GN +LAN+YA GKW+ E ++ ++ + KK+ CSWI
Sbjct: 442 KLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWI 491
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 169/416 (40%), Gaps = 103/416 (24%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVFDQIPKCKT 67
SK N KQ+H+ H Y +L+ L ++L AR +FD+IPK +
Sbjct: 60 SKALNPGKQLHAQFY------HLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPK-QN 112
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE------ 121
FLW LIR + + +I+LY KM G+ FT VL AC+ + ++ E
Sbjct: 113 LFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHE 172
Query: 122 ---------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
A+I Y K G + DA R+FD + R+ + W++M+A YA G+
Sbjct: 173 YVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDE 232
Query: 167 AKEFYDRM-------TEKNSVTWV--------------------------------AMIA 187
+ M TE VT + A+I
Sbjct: 233 SISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALID 292
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y KCG V+ A +F+ + E W A+ Y +G A A++++ MR+E+ R +
Sbjct: 293 MYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHIT 351
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
VG ++AC++ + +DEG R Y +L R++
Sbjct: 352 FVGVLAACSR----------GRLLDEG---RALY---------------NLMVRDYGITP 383
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
V Y+ MI G+ EA D+ +RN ++P+ + +L +C G VE
Sbjct: 384 T--VQHYTCMIDLLGHCGQLDEAYDL---IRNMSVKPDSGVWGALLNSCKIHGNVE 434
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 167/502 (33%), Positives = 267/502 (53%), Gaps = 39/502 (7%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFDQIPKCKT 67
+T L Q+H+ +K+ + D A ++R L +L YA ++F+Q+P+ +
Sbjct: 27 RTIRDLSQIHAVFIKS-GQIRDTL--AAAEILRFCATSDLHHRDLDYAHKIFNQMPQ-RN 82
Query: 68 QFLWTSLIRNHVLHAHFRQ--SILLYAKMHRLGVLTSG-FTFSSVLNACARVPSLLEA-V 123
F W ++IR + +I L+ +M + FTF SVL ACA+ + +
Sbjct: 83 CFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQ 142
Query: 124 ICGYT-KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK-AAKEFYDRMTEKNSVT 181
I G K G D S +V Y CG MK A FY + E+ V
Sbjct: 143 IHGLALKYGFGGDE------------FVMSNLVRMYVICGLMKDACVLFYKNIIEREMVM 190
Query: 182 -------------WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
W MI GY + G+ + A+ +FD++ + W M Y QNG+ K
Sbjct: 191 MIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKD 250
Query: 229 AIEMYKVMRQ-ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A+E+++ M++ E++R + V +V + A ++LG +E+ L + ++ + + +ALI
Sbjct: 251 AVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALI 310
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+SKCG ++ A F R+ ++VI++S+MI FA HG++ +A+D F KMR G+ P+ V
Sbjct: 311 DMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 370
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
+I +LTACSH GLVE+G + F M V G++P EH CMVDLLGR G L++A I++
Sbjct: 371 AYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILN 430
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
D W ALLGAC++H N E+G+ A L+++ P +G L+N+YAS G W +
Sbjct: 431 MPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEV 490
Query: 468 EIVKMMISETEKKKSPGCSWIS 489
+++ + E + +K PGCSWI
Sbjct: 491 SEMRLRMKEMDIRKDPGCSWID 512
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 147/397 (37%), Positives = 225/397 (56%), Gaps = 12/397 (3%)
Query: 94 MHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRL-FDSMAERNVISWS 152
M VL FT S VL AC + L V+ G T GL Q+L F S N+ +
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLK----LSDVVNGKTIHGLF---QKLGFGS----NLFLQN 49
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
++ Y CG M A +++M ++++VTW +IA K G++ A F + +
Sbjct: 50 MILNLYGLCGEMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRS 109
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W +M +VQ G AI+++ + E VR +EV +V ++AC LGD+++ I+ ++
Sbjct: 110 WTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYST 169
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ R +V N LI M+ KCG L+ A R F ++ + V+S+S+MI A HG+++EAL
Sbjct: 170 KSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALC 229
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F +M G++PN VTFIG+L ACSH GL+++G + F MT +G+ P EH C+VDL
Sbjct: 230 LFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLF 289
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
R+G LE+AH I+ + WGALLG CKVH N +L E A +HL EL P G
Sbjct: 290 SRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYV 349
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
+++NIYA +W+D+ V+ ++ + KK+ G S I+
Sbjct: 350 VISNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSIT 386
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 33/233 (14%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----------- 119
WTS+I V ++I L+ K+ V + T SVL ACA + L
Sbjct: 110 WTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYST 169
Query: 120 ----------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+I Y K G +++A+R+F M ER V+SWSAM+AG A G + A
Sbjct: 170 KSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALC 229
Query: 170 FYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE-----PDASCWAAMTVCY 220
+ M + N VT++ ++ G + E ++ F ++ P + + +
Sbjct: 230 LFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLF 289
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
+ G + A E M ++ + V + C ++++A KH+ E
Sbjct: 290 SRAGLLEEAHEFILSM---PIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSE 339
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR+VF ++ + +T W+++I +H +++ L+++M +LGV +G TF +L+
Sbjct: 193 LENARRVFYEMEE-RTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLH 251
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSM-AERNVIS----WSAMVAGYANCGNMKA 166
AC+ +GL+D+ +R F SM A+ VI + +V ++ G ++
Sbjct: 252 ACSH--------------MGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEE 297
Query: 167 AKEFYDRMTEK-NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
A EF M K N V W A++ G + A++ +SE D V + N Y
Sbjct: 298 AHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVV--ISNIY 355
Query: 226 AKA-----AIEMYKVMRQENVR 242
A+A A + K+M+ V+
Sbjct: 356 AEAERWEDAARVRKLMKDRGVK 377
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 244/504 (48%), Gaps = 69/504 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ ARQ FD I CK WT ++ + + F+ S+ L+A+M +G + FTF+ VL
Sbjct: 91 SVNSARQAFDAIA-CKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVL 149
Query: 111 NACARVPSLLEAVICG-------------------------YTKIGLMDDAQRLFDSMAE 145
AC LEA G YTK G +D R+F+ M +
Sbjct: 150 KACIG----LEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPK 205
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWV------------------ 183
+VI WS M++ YA + A E + +M N T+
Sbjct: 206 HDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQV 265
Query: 184 -----------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A++ Y KCG + + K+F E+ + W M V YVQ+G
Sbjct: 266 HCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDG 325
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
A+ +YK M + V+ SEV + AC L +E+ + + D+ V NAL
Sbjct: 326 DKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNAL 385
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M++KCG + A F + +D IS+++MI+ ++ HG EAL F M+ PN+
Sbjct: 386 IDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNK 445
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TF+ +L+ACS+ GL++ G F+ M + +GI+P EH TCMV LLGRSG L+KA LI
Sbjct: 446 LTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIE 505
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ + W ALLGAC +H + +LG ++A+ +L++ P+ LL+NIYA +W
Sbjct: 506 EIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNS 565
Query: 467 SEIVKMMISETEKKKSPGCSWISS 490
V+ + KK PG SWI +
Sbjct: 566 VASVRKFMKNKGVKKEPGLSWIEN 589
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 188/417 (45%), Gaps = 62/417 (14%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN-----ACARVPSLLEA--- 122
+ +LI+ +V + + L++++HR G + F F+++L CA + L A
Sbjct: 9 FVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIY 68
Query: 123 -------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+I Y G ++ A++ FD++A ++++SW+ MVA YA + + +
Sbjct: 69 KLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQ 128
Query: 170 FYDRMT----EKNSVTW-----------------------------------VAMIAGYG 190
+ M N T+ V ++ Y
Sbjct: 129 LFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYT 188
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
K G+ + +VF+E+ + D W+ M Y Q+ ++ A+E++ MR+ V ++
Sbjct: 189 KFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFAS 248
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+ +C + ++++ + HV + D +VSNAL+ +++KCG LD + + F + N++
Sbjct: 249 VLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRN 308
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+++++MI + G +AL ++ M ++ ++VT+ VL AC+ +E G +
Sbjct: 309 EVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHS 368
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
L + K + ++D+ + G ++ A L+ D D +W A++ +H
Sbjct: 369 LSLKTIYDKDVVVG-NALIDMYAKCGSIKNAR-LVFDMLSERDEISWNAMISGYSMH 423
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQVH ++LK D + + L+ + G L + ++F ++P + + W ++I
Sbjct: 263 KQVHCHVLKV---GLDGNVFVSNALMDVYAKCG-RLDNSMKLFMELPN-RNEVTWNTMIV 317
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL---------------- 120
+V +++ LY M V S T+SSVL ACA + ++
Sbjct: 318 GYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDK 377
Query: 121 -----EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
A+I Y K G + +A+ +FD ++ER+ ISW+AM++GY+ G + A + + M
Sbjct: 378 DVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQ 437
Query: 176 E----KNSVTWVAMIAGYGKCGEVREAKKVFDEIS-----EPDASCWAAMTVCYVQNGYA 226
E N +T+V++++ G + + F + EP + M ++G+
Sbjct: 438 ETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHL 497
Query: 227 KAAIEMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
A+++ + + E NV++ A++G AC DV++ + A+ +
Sbjct: 498 DKAVKLIEEIPLEPNVKVWR-ALLG---ACVIHNDVDLGIMSAQQI 539
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 246/499 (49%), Gaps = 66/499 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH-RLGVLTSGFTFSSVLNAC 113
A VF ++P + W +++ + H + +I M R G+ + T S+L
Sbjct: 153 AANVFAKMPM-RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLL 211
Query: 114 ARVPSLL------------------EAVICG------YTKIGLMDDAQRLFDSMAERNVI 149
A+ +L E V+ G Y K + A R+F M RN +
Sbjct: 212 AQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEV 271
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKN----SVTWVA--------------------- 184
+WSA++ G+ C M A + M + S T VA
Sbjct: 272 TWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHAL 331
Query: 185 ---------------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+++ Y K G + EA +FDEI+ D + A+ YVQNG A+ A
Sbjct: 332 LAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEA 391
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++K M+ NV+ MV I AC+ L ++ V + N+LI M
Sbjct: 392 FLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDM 451
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG +DL+ + F ++ +D++S+++MI + HG +EA +FL M+N+G EP+ VTF
Sbjct: 452 YAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTF 511
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
I ++ ACSH GLV +G F+ MT +GI P EH CMVDLL R G L++A+ I
Sbjct: 512 ICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMP 571
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D WGALLGAC++H N +LG+ +R + +LGPE TGN LL+NI+++ G++ ++
Sbjct: 572 LKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAE 631
Query: 470 VKMMISETEKKKSPGCSWI 488
V+++ KKSPGCSWI
Sbjct: 632 VRIIQKVKGFKKSPGCSWI 650
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 186/443 (41%), Gaps = 70/443 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
L+ ARQVFD+IP + + +LIR + F +I LY M V + +TF VL
Sbjct: 48 QLALARQVFDRIPAPDAR-AYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 111 NACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC+ + L A+I Y + A +F M R+V+
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 150 SWSAMVAGYANCGNMKAA----KEFYDR-------------------------------- 173
+W+AM+AGYAN G A + DR
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 174 -------MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
E+ + A++ Y KC + A +VF ++ + W+A+ +V
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 227 KAAIEMYKVMRQENV-RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
A ++K M E + +S ++ A+ C L D+ M L + + N+
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ M++K G ++ A F I KD ISY ++++ + +GK++EA +F KM+ ++P+
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406
Query: 346 QVTFIGVLTACSHGGLVEDG-CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
T + ++ ACSH ++ G C ++ R G+ T ++D+ + G+++ +
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSVIIR--GLALETSICNSLIDMYAKCGRIDLSRQ- 463
Query: 405 IMDYKDFCDAGTWGALLGACKVH 427
+ D D +W ++ +H
Sbjct: 464 VFDKMPARDIVSWNTMIAGYGIH 486
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
K++ W + + G++ A++VFD I PDA + A+ Y G AAI++Y+ M
Sbjct: 31 KDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSM 90
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
V ++ + AC+ L D+ + H +VS ALI ++ +C
Sbjct: 91 LYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARF 150
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTA 355
A F+++ +DV+++++M+ +A+HG A+ L M++ G+ PN T + +L
Sbjct: 151 GPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPL 210
Query: 356 CS-HGGLVE 363
+ HG L +
Sbjct: 211 LAQHGALFQ 219
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 32/223 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ A +FD+I K + +L+ +V + ++ L++ KM V T S++
Sbjct: 357 INEATMLFDEI-AIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIP 415
Query: 112 ACARVPSL----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVIS 150
AC+ + +L LE IC Y K G +D ++++FD M R+++S
Sbjct: 416 ACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVS 475
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
W+ M+AGY G K A + M E + VT++ +IA G V E K FD ++
Sbjct: 476 WNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMT 535
Query: 207 E-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMR-QENVRI 243
P + M + G+ A + + M + +VR+
Sbjct: 536 HKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRV 578
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ H G L LA + F RI D +Y+++I A++ G A+D++ M + PN+
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQLEKAHSL 404
TF VL ACS + D C + + T+ T ++DL R + A ++
Sbjct: 100 YTFPFVLKACS---ALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANV 156
Query: 405 I--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
M +D W A+L + N + A HLL++
Sbjct: 157 FAKMPMRDVV---AWNAMLAG---YANHGMYHHAIAHLLDM 191
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/486 (33%), Positives = 255/486 (52%), Gaps = 36/486 (7%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
LKQ H Y++ +T + A+F I G +L YA VF P C +L ++I
Sbjct: 31 LKQSHCYMI--ITGLNRDNLNVAKF-IEACSNAG-HLRYAYSVFTHQP-CPNTYLHNTMI 85
Query: 76 RNHVL----HAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL-------EAVI 124
R L +AH +I +Y K+ L FTF VL RV + + V+
Sbjct: 86 RALSLLDEPNAH-SIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
G FDS +V + ++ Y +CG + A++ +D M K+ W A
Sbjct: 145 FG-------------FDS----SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNA 187
Query: 185 MIAGYGKCGEVREAKKVFDEIS--EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
++AGYGK GE+ EA+ + + + + W + Y ++G A AIE+++ M ENV
Sbjct: 188 LLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVE 247
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
EV ++ +SAC LG +E+ + +VD +R ++NA+I M++K G + A
Sbjct: 248 PDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDV 307
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + ++V++++++I A HG EAL MF +M G+ PN VTFI +L+ACSH G V
Sbjct: 308 FECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWV 367
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
+ G + F M +GI P EH CM+DLLGR+G+L +A +I +A WG+LL
Sbjct: 368 DLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
A VH + ELGE A L++L P +GN LLAN+Y+++G+W +S +++ M+ KK
Sbjct: 428 ASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKM 487
Query: 483 PGCSWI 488
G S I
Sbjct: 488 AGESSI 493
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 253/503 (50%), Gaps = 79/503 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD++P+ + + W ++I + + ++ ++ M R + F F+SVL+A A
Sbjct: 165 AREVFDRMPE-RNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALA 223
Query: 115 RVP----------------------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
VP S+L A++ Y K G +DD+ ++F+ ++N I+WS
Sbjct: 224 -VPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWS 282
Query: 153 AMVAGYANCGNMKAAKEFYDRM-------------------------------------- 174
AM+ GYA G+ A + + RM
Sbjct: 283 AMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKL 342
Query: 175 -TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
E A++ Y K G +A+K F+ + +PD W +M YVQNG + A+ +Y
Sbjct: 343 GFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLY 402
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSK 292
M+ E + +E+ M + AC+ L + I A+ + G + +AL M++K
Sbjct: 403 CRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVT-IGSALSTMYAK 461
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG L+ F R+ +D+IS+++MI+ + +G +EAL++F +MR + +P+ VTF+ V
Sbjct: 462 CGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNV 521
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+ACSH GLV+ G F +M FG+ P EH CMVD+L R+G+L +A K+F
Sbjct: 522 LSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEA-------KEFI 574
Query: 413 DAGT-------WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
++ T W LLGAC+ + N ELG A L+ELG +++ LL+ IY ++G+ +
Sbjct: 575 ESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPE 634
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D E V+ M+ K PGCSWI
Sbjct: 635 DVERVRSMMKVRGVSKEPGCSWI 657
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 160/364 (43%), Gaps = 67/364 (18%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSIL--LYAKMHRLGVLTSGFTFSS 108
+L A+ VFD+I K W LI + S + L+ +M +L + TFS
Sbjct: 58 HLPKAKLVFDRIHN-KDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSG 116
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGNMKAA 167
+ A + + S+ A + MA +V S+++ Y G + A
Sbjct: 117 IFTAASNLSSIF-----------FGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEA 165
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+E +DRM E+N VTW MI+GY +Q A
Sbjct: 166 REVFDRMPERNEVTWATMISGYA------------------------------IQR-LAG 194
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG-----CCDRTNY- 281
A E++++MR+E ++E A +SA + + VD G +T
Sbjct: 195 EAFEVFELMRREEEDVNEFAFTSVLSALA----------VPEFVDSGKQIHCLAVKTGLL 244
Query: 282 ----VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
+ NAL+ M++KCG LD + + F +K+ I++S+MIT +A G S +AL +F +M
Sbjct: 245 VFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRM 304
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
GI P++ T +GVL ACS VE+G KQ G + +T +VD+ +SG
Sbjct: 305 HFAGINPSEFTLVGVLNACSDACAVEEG-KQVHNYLLKLGFESQLYIMTALVDMYAKSGV 363
Query: 398 LEKA 401
E A
Sbjct: 364 TEDA 367
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 114/240 (47%), Gaps = 4/240 (1%)
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA--IEMYKVMRQENV 241
++I Y KC + +AK VFD I D W + Y Q G ++ +E+++ MR +N+
Sbjct: 48 SLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNI 107
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ G +A + L + + C +V ++L++M+ K G L A
Sbjct: 108 LPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEARE 167
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F R+ ++ +++++MI+ +A + EA ++F MR E + N+ F VL+A +
Sbjct: 168 VFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEF 227
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V+ G KQ + G+ L +V + + G L+ + + + + ++ TW A++
Sbjct: 228 VDSG-KQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQ-VFEMSNDKNSITWSAMI 285
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQVH+YLLK + Y L+ + G AR+ F+ + + LWTS+I
Sbjct: 333 KQVHNYLLKL---GFESQLYIMTALVDMYAKSGVTED-ARKGFNYLQQ-PDLVLWTSMIA 387
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----------------L 120
+V + ++ LY +M G+L + T +SVL AC+ + + L
Sbjct: 388 GYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGL 447
Query: 121 EAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM- 174
E I Y K G +++ +F M ER++ISW+AM++G + G K A E ++ M
Sbjct: 448 EVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMR 507
Query: 175 ---TEKNSVTWVAMIAGYGKCGEVREA----KKVFDEI 205
T+ + VT+V +++ G V + +FDE
Sbjct: 508 QQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEF 545
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK--SQEALDMFLKMR 338
Y++N+LI+ ++KC +L A F RI NKDVIS++ +I ++ G S +++F +MR
Sbjct: 44 YLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMR 103
Query: 339 NEGIEPNQVTFIGVLTACSH 358
+ I PN TF G+ TA S+
Sbjct: 104 ADNILPNAHTFSGIFTAASN 123
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 213/402 (52%), Gaps = 40/402 (9%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
Y K + A+++FD M RN +SWSAM+ GY MK A E +D+M K+++ +
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVT 314
Query: 187 AG----------------------------------------YGKCGEVREAKKVFDEIS 206
G Y KCG + +A + FDE++
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMN 374
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
D+ ++A+ VQNG A A+ ++++M+ + M+G + AC+ L ++
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
++ + NALI M+SKCG + A F+R+ D++S+++MI + HG
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
EAL +F + G++P+ +TFI +L++CSH GLV +G F+ M+R F I P EH
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
CMVD+LGR+G +++AH I + D W ALL AC++H N ELGE ++ + LGPE
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
TGN LL+NIY++ G+W D+ +++ + KK PGCSWI
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWI 656
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 227/483 (46%), Gaps = 74/483 (15%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
+SK+ + K++H + LK + + + L L + + AR++FD+IP +
Sbjct: 20 QSKSLTEAKKIHQHFLKNTSNADSSVLHK----LTRLYLSCNQVVLARRLFDEIPN-PSV 74
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV----- 123
LW +IR + + F +I LY M LGV + +T+ VL AC+ + ++ + V
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 124 -----------ICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
+C Y K G++ +AQRLF SM+ R+V++W+AM+AG + G A
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194
Query: 168 KEFYDRMTEK----NSVTWVAMIAG----------------------------------- 188
+ +M E+ NS T V ++
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDM 254
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY-KVMRQENVRISEVA 247
Y KC + A+K+FD + + W+AM YV + K A+E++ +++ ++ + + V
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVT 314
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ + AC +L D+ L ++ + + N L+ M++KCG +D A R F +
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMN 374
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG-C 366
KD +S+S++++ +G + AL +F M+ GI+P+ T +GVL ACSH ++ G C
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 367 KQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
L+ R F T+ L C ++D+ + G++ A + + D D +W A++
Sbjct: 435 SHGYLIVRGFA----TDTLICNALIDMYSKCGKISFARE-VFNRMDRHDIVSWNAMIIGY 489
Query: 425 KVH 427
+H
Sbjct: 490 GIH 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 10/217 (4%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ AC Q + A + +H + + + V + L ++ C + LA R F I N V
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
I ++ +I A+A +G A+D++ M + G+ PN+ T+ VL ACS +EDG +
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV-EIHS 133
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVN 429
++FG++ T +VD + G L +A L M ++D W A++ C ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV---AWNAMIAGCSLY-- 188
Query: 430 AELGEIAARHLLELGPEKT-GNSALLANIYASMGKWK 465
L + A + ++++ E NS+ + + ++G+ K
Sbjct: 189 -GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAK 224
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 245/440 (55%), Gaps = 14/440 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-FTFSSV 109
+++ AR++FD + W +LI +V R+++ ++ +M G +T T V
Sbjct: 170 SMAEARKLFDG-SHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGV 228
Query: 110 LNACARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
++ A++ L L + GY + + RL + + + Y CG+++ AK
Sbjct: 229 VSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDM-----------YIKCGDLERAK 277
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
++ + +K V+W MI GY + G + +A+KVFDE+ E D W A+ YVQ K
Sbjct: 278 SVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKE 337
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+ ++ M++ V ++ MV +SAC+QLG +EM + ++D + + L+
Sbjct: 338 ALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVD 397
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKCG ++ A R F I K+ +++++MI+ A+HG + A+ F +M G++P+++T
Sbjct: 398 MYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEIT 457
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
FIGVL+AC H GLV++G + F LM + ++ +H +CMVDLLGR+G L++A L+
Sbjct: 458 FIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTM 517
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
DA WGAL AC++H N LGE AA L+EL P +G LLAN+YA K ++
Sbjct: 518 PMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKAD 577
Query: 469 IVKMMISETEKKKSPGCSWI 488
V++M+ +K PGCS I
Sbjct: 578 KVRVMMRHLGVEKVPGCSCI 597
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 173/410 (42%), Gaps = 83/410 (20%)
Query: 104 FTFSSVLNACARVP--SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
TF +L ACAR+ + AV+ +G D V +A + A C
Sbjct: 121 LTFPFLLKACARLQERNYGNAVLGNVLSLGFHAD------------VFVVNAAMHFLAVC 168
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
+M A++ +D ++ V+W +I GY + G REA ++F
Sbjct: 169 SSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMF------------------- 209
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
++++ V EV M+G +S QL D+E+ L +V+ T
Sbjct: 210 -----------WRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVR 258
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG---------------- 325
+ N ++ M+ KCG L+ A F I K ++S+++MI +A G
Sbjct: 259 LMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERD 318
Query: 326 ---------------KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+ +EAL +F M+ +EP+ +T + +L+ACS G +E G
Sbjct: 319 VFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHH 378
Query: 371 LMTRVFGIKPLTEHL-TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
+ R L+ L T +VD+ + G +EKA + + + +A TW A++ H +
Sbjct: 379 YIDRRR--VSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEK-NALTWTAMISGLANHGH 435
Query: 430 AELGEIAARHLLELG---PEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
A++ + ++ELG E T L A +A + K + E +M+S+
Sbjct: 436 ADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVK-EGQEFFSLMVSK 484
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 256/481 (53%), Gaps = 23/481 (4%)
Query: 15 QLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
QLKQ+ + ++KT +T+P +FL +L YA++VF+ I T F+W
Sbjct: 3 QLKQIQAQMIKTAIITEPK----LATKFLTLCTSPHVGDLLYAQRVFNGITSPNT-FMWN 57
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV-ICGYT-KI 130
++IR + + L Y +M V + +TF +L AC + ++ EA+ + G K+
Sbjct: 58 AIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKL 117
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
G D V + +A++ YA CG + A++ +D + E+++V+W MI GY
Sbjct: 118 GFGSD------------VFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYI 165
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
K G+V+ A VF ++ + W ++ V+ G + A+ + M+ + VA+
Sbjct: 166 KSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIAS 225
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK--N 308
++AC LG ++ L +V D + AL++M+ KCG ++ A F ++K
Sbjct: 226 LLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQ 285
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
KDV +++MI FA HG+ EAL+ F +MR EGI PN +TF VL ACS+GGLVE+G +
Sbjct: 286 KDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKEL 345
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F+ M + + P EH CMVDLLGRSG+L++A LI A WGALL AC +H
Sbjct: 346 FKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHR 405
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ LG HL+E+ + +G LA I A+ GKWK++ V++ + SPG S +
Sbjct: 406 DFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSV 465
Query: 489 S 489
+
Sbjct: 466 T 466
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 239/471 (50%), Gaps = 68/471 (14%)
Query: 86 QSILLYAKMHRLGVLTSGFTFSSVLNAC-----------------ARVPSLLEAVICG-- 126
++++ + +M++ G TFS +L A AR+ LL V+ G
Sbjct: 12 EALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTA 71
Query: 127 ----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE------ 176
Y K G +DDA+ F+ + +N ++W+AM+ Y G + A E + M E
Sbjct: 72 VISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSAR 131
Query: 177 -------------------------------------KNSVTWVAMIAGYGKCGEVREAK 199
K+ V A++ Y KCG++ EA+
Sbjct: 132 PDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEAR 191
Query: 200 KVFDEIS-EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISACTQ 257
KVFD I + D+ CW AM Y Q+G K A+++Y+ M ++ + V I C +
Sbjct: 192 KVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAE 251
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
L ++ + V D VSNAL+HM+ KCG LD A F +K KD IS++++
Sbjct: 252 LSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTI 311
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I+++A HG S +AL ++ +M +G++P +VTF+G+L+ACSHGGLV DG F M
Sbjct: 312 ISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHR 371
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
IKP H C++DLLGR G+L +A ++ +A W +LLGACK H + + G AA
Sbjct: 372 IKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAA 431
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+++ P +G LL+NIYA+ G+WKD E ++ +++ KKSPG SWI
Sbjct: 432 DQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWI 482
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 136/331 (41%), Gaps = 47/331 (14%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
+ Q +++H L + + H L+ + GD L AR+VFD I
Sbjct: 148 EDLEQGREIHEMLRREGKELHKDV-VVGTALLNMYSKCGD-LEEARKVFDSIRHDADSVC 205
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-FTFSSVLNACARVPSLLE-------- 121
W ++I + H +Q++ LY MH L TF +V++ CA + +L +
Sbjct: 206 WNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARV 265
Query: 122 -------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
A++ Y K G +D+A +F SM ++ ISW+ +++ YA G+ A
Sbjct: 266 RATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQAL 325
Query: 169 EFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVF-----DEISEPDASCWAAMTVC 219
Y M + VT+V +++ G V + F D +P + + +
Sbjct: 326 LLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCI-ID 384
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
+ G A E+ V++ ++ + V + + AC GD++ A V DR
Sbjct: 385 LLGRGGRLAEAEL--VLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQV----VDRV 438
Query: 280 NYVSNALI---HMHSKCGYLDLAWREFSRIK 307
+ S + ++++ G W++ +I+
Sbjct: 439 PWTSGGYVLLSNIYAAAG----RWKDVEKIR 465
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE-DGCKQFELMTRVF 376
+ AF+ +G EAL F +M G P++VTF +L A + G D ++ R+
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G+ P T ++ + G+ G+L+ A + + + + ++ TW A++
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQ-WKNSVTWNAMM 104
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 251/481 (52%), Gaps = 43/481 (8%)
Query: 30 PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSI 88
PH H Y L L + G L A ++ D +P + + ++I + H +++
Sbjct: 91 PHKNAHSYNSLLAALARGRG-TLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEAL 149
Query: 89 LLYAKMHR---LG---VLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFD- 141
++A++ R LG V FT S +ACA + DA+ L +
Sbjct: 150 RVFAQLARDRGLGQQQVAIDRFTVVSAASACAG-----------------LRDARHLREL 192
Query: 142 ------SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
S E VI +AMV Y+ G ++ A+ +D+MT ++SV+W +MIAGY + +
Sbjct: 193 HGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASML 252
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
+A +VFD + DA W A+ + QNG + A+E+++ M E V + A+V + AC
Sbjct: 253 DDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGAC 312
Query: 256 TQLGDVEMAA-----ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
++G V IL + + G ++ NALI M+SKCG + A F R+ +D
Sbjct: 313 AKVGLVARGKEVHGFILRRSI--GSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERD 370
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+IS++SM+T F+ +G+ +++L +F +M + ++P VTF+ VLTACSH GLV DG + E
Sbjct: 371 IISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILE 430
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD---FCDAGTWGALLGACKVH 427
M G++P EH +D LGR+ QLE+A I G+WGALLGAC VH
Sbjct: 431 SMQD-HGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVH 489
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N E+ E A L +L PE +G +L+NIY++ G+W D+ V+ ++ +K SW
Sbjct: 490 GNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSW 549
Query: 488 I 488
I
Sbjct: 550 I 550
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 250/458 (54%), Gaps = 30/458 (6%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM----HRLGVLTSGFTFS 107
+++A VFDQIP+ +F++ +LIR A R ++ LY +M GV TF
Sbjct: 28 IAHAYLVFDQIPR-PDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFP 86
Query: 108 SVLNACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAER 146
VL AC + + + A+I + G + A LFD A
Sbjct: 87 FVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRARE 146
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
+ ++WSAM+ G A G++ AA++ +D K+ V+W MI Y K G++ A+++FD++
Sbjct: 147 DAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVP 206
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
E D W M YV+ G A+E+++ M++ + V M+ +SAC GD+++
Sbjct: 207 ERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQR 266
Query: 267 LAKHVDEGCCDRTNY---VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
L + + R + + NALI M++KCG + A F +++KDV +++S++ A
Sbjct: 267 LHSSLSD-MFSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLAL 325
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
HG E++DMF KM + P+++TF+ VL ACSHGG+V+ G + F LM + ++P +
Sbjct: 326 HGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIK 385
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
H C+VD+LGR+G L++A I K ++ W LL AC+VH EL + A R LL+
Sbjct: 386 HYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKA 445
Query: 444 GPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
+++G+ LL+NIYAS+G+W SE ++ ++ ++ K
Sbjct: 446 RNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGVNK 483
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 30/289 (10%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ AR++FDQ+P+ + W +I +V ++ L+ +M R+G T S+L
Sbjct: 194 DMALARELFDQVPE-RDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLL 252
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE---RN---VISWSAMVAGYANCGNM 164
+ACA G +D QRL S+++ RN V+ +A++ YA CG+M
Sbjct: 253 SACA--------------DSGDLDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSM 298
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAMTVCY 220
K+A E + M +K+ TW +++ G G V E+ +F+++ PD + A+ +
Sbjct: 299 KSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIAC 358
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
G E + +M+ + + G I LG + + +D C+ +
Sbjct: 359 SHGGMVDKGREFFNLMQHKYRVEPNIKHYGCI--VDMLGRAGLLKEAFEFIDTMKCEPNS 416
Query: 281 YVSNALIHMHSKCGYLDLAW---REFSRIKNKDVISYSSMITAFADHGK 326
+ L+ G ++LA R+ + +N + Y + +A G+
Sbjct: 417 VIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGE 465
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 40/282 (14%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM----RQENVRISEVAM 248
G + A VFD+I PD + + + A+ +Y M VR ++
Sbjct: 26 GAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTF 85
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL---------- 298
+ ACT +G + + HV + C+ +V NALI MH+ CG L +
Sbjct: 86 PFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAR 145
Query: 299 ----AWRE-----------------FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
AW F KD++S++ MITA+A G A ++F ++
Sbjct: 146 EDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQV 205
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ V G + SH +E FE M R+ G KP + ++ SG
Sbjct: 206 PERDVVSWNVMISGYVRCGSHLHALE----LFEQMQRM-GEKPDIVTMLSLLSACADSGD 260
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
L+ L D + +LG + + A+ G + + H
Sbjct: 261 LDVGQRLHSSLSDMFSRNGFPVVLGNALIDMYAKCGSMKSAH 302
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 209/370 (56%), Gaps = 2/370 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I Y K + A+ LFD M ER+ ISW+ M++GY +M+ A + M +++T
Sbjct: 309 SMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLT 368
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +MI+G+ + G + A+ +F I + + W +M Y NG K A E+Y+ M +
Sbjct: 369 WNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGE 428
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ + +S C+ + + + + + + ++N+LI M+S+CG + A
Sbjct: 429 KPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIP-INNSLITMYSRCGAIVEART 487
Query: 302 EFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +K K+VIS+++MI +A HG + +AL++F M+ + P +TFI VL AC+H G
Sbjct: 488 IFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAG 547
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
V++G F+ M FGI+P EH +VD++GR GQLE+A LI D WGAL
Sbjct: 548 FVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGAL 607
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
LGAC+VH N EL +AA L++L PE + LL N+YA +G+W ++ ++MM+ +
Sbjct: 608 LGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIR 667
Query: 481 KSPGCSWISS 490
K PG SW+ S
Sbjct: 668 KQPGYSWVDS 677
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 205/440 (46%), Gaps = 75/440 (17%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR +FD +P+ + W S+I +V ++ L+ +M V++ S ++
Sbjct: 83 INEARALFDAMPQ-RNIVTWNSMITGYVRRREMAKARKLFDEMPDRDVVSWNLMISGYVS 141
Query: 112 ACAR-----------VPSL----LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
R +P +I GYT+ G MD+A +LFDSM ERNV+SW+AMV
Sbjct: 142 CQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVT 201
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVAMI------------------------------ 186
G+ G+++ A EF+ RM E++S + A++
Sbjct: 202 GFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLV 261
Query: 187 -------AGYGKCGEVREAKKVFDEIS------------EPDASCWAAMTVCYVQNGYAK 227
AGYG+ G V +A+++FD+I E + W +M +CYV+
Sbjct: 262 HAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIF 321
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
+A ++ M++ + ++ IS ++ D+E A +L + + + N++I
Sbjct: 322 SARVLFDQMKERDT----ISWNTMISGYVRMSDMEEAWMLFQEMP----NPDTLTWNSMI 373
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
++ G L+LA F+ I K+++S++SMI + ++G + A +++ +M +G +P++
Sbjct: 374 SGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRH 433
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
T VL+ CS + G + + +T+ + P ++ + R G + +A ++ +
Sbjct: 434 TLSSVLSVCSGFAALHLGMQIHQQITKT--VIPDIPINNSLITMYSRCGAIVEARTIFDE 491
Query: 408 YKDFCDAGTWGALLGACKVH 427
K + +W A++G H
Sbjct: 492 VKLQKEVISWNAMIGGYAFH 511
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 45/256 (17%)
Query: 162 GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
G + A+ +D M ++N VTW +MI GY + E+ +A+K+FDE+ + D W M YV
Sbjct: 81 GRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEMPDRDVVSWNLMISGYV 140
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
+C E +H+ + +R
Sbjct: 141 --------------------------------SCQGRWVEE-----GRHLFDEMPERDCV 163
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
N +I +++ G +D A + F ++ ++V+S+++M+T F +G + A++ F++M
Sbjct: 164 SWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMP--- 220
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP--LTEHLTCMVDLLGRSGQLE 399
E + + ++ G + D K+ L +R L ++ G++G+++
Sbjct: 221 -ERDSASLSALVAGLIQNGEL-DEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVD 278
Query: 400 KAHSLIMDYKDFCDAG 415
KA L D F D G
Sbjct: 279 KARQLF-DQIPFYDGG 293
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 23/197 (11%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD++ K W ++I + H ++ L+ M RL V + TF SVLNACA
Sbjct: 485 ARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACA 544
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKAAKE 169
G+ K G M F SMA E + ++++V G ++ A +
Sbjct: 545 H---------AGFVKEGRMH-----FKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMD 590
Query: 170 FYDRMT-EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--EPDASC-WAAMTVCYVQNGY 225
+ M E + W A++ V A+ + + EP++S + + Y G
Sbjct: 591 LINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQ 650
Query: 226 AKAAIEMYKVMRQENVR 242
A EM +M + N+R
Sbjct: 651 WDNATEMRMMMERNNIR 667
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 233/439 (53%), Gaps = 15/439 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A++VF + + W SLI V +++L+ +M R V+ F ++L
Sbjct: 329 LDLAKRVFKSLRE-HDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILG 387
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
C+ P Y G + + M + +A++ YA CG+ A +
Sbjct: 388 VCSG-PD--------YASTGELLHGYTIKSGMGSSAPVG-NAIITMYAKCGDTDKADLVF 437
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
M +N+++W AMI + + G++ +A+ FD + E + W +M YVQNG+++ ++
Sbjct: 438 RLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLK 497
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+Y MR V+ + +I AC L V++ + H + V+N+++ M+S
Sbjct: 498 LYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYS 557
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
+CG + A F I +KD+IS+++M+ AFA +G + +D F M +PN ++++
Sbjct: 558 RCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVS 617
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYK 409
VL+ CSH GLV +G F+ MTRVFGI P EH +CMVDLLGR+G LE+A LI M +K
Sbjct: 618 VLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFK 677
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+A W ALLG+C+VH + L E AA+ L+EL E + LL+N+Y+ G+ +
Sbjct: 678 P--NATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVAD 735
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ + S GCSWI
Sbjct: 736 MRKLMKVKGIRTSRGCSWI 754
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 185/439 (42%), Gaps = 59/439 (13%)
Query: 24 LKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHA 82
+ + H + + +IR L + +S A ++FD++P + K WT++I + +
Sbjct: 63 FQVFQETHHRNIFTWNTMIRAL-VSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNG 121
Query: 83 HFRQSILLYAKMHRL----GVLTSGFTFSSVLNAC-----ARVPSLLEAVICGYTKIGL- 132
+S ++ M R G F+F+SV+ AC +R+ L A++ +K+G
Sbjct: 122 FHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALV---SKLGFG 178
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
M+ + +++V Y CG++ A+ + + + W +MI GY +
Sbjct: 179 METCIQ-------------NSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQM 225
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
+A ++F+ + E D W + + Q+G+ + M+ M + + + +
Sbjct: 226 YGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVL 285
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
SAC D++ A L + N LI M++KCG LDLA R F ++ D I
Sbjct: 286 SACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHI 345
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS-----------HGGL 361
S++S+IT G ++AL +F +MR + ++ +L CS HG
Sbjct: 346 SWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYT 405
Query: 362 VEDG-----------------CKQFELMTRVFGIKPL--TEHLTCMVDLLGRSGQLEKAH 402
++ G C + VF + PL T T M+ RSG + KA
Sbjct: 406 IKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKAR 465
Query: 403 SLIMDYKDFCDAGTWGALL 421
D + TW ++L
Sbjct: 466 GYF-DMMPERNIVTWNSML 483
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 145/354 (40%), Gaps = 87/354 (24%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT--EKNSVTWVA 184
Y+ GL DA ++F RN+ +W+ M+ + M A++ +D M K+SV+W
Sbjct: 53 YSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTT 112
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQEN--- 240
MI+GY QNG+ + E + +M R N
Sbjct: 113 MISGYS-------------------------------QNGFHSRSFETFSLMIRDTNDGG 141
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA- 299
+ + AC LGD +A L V + + N+++ M+ KCG +DLA
Sbjct: 142 KNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAE 201
Query: 300 -------------WRE-----------------FSRIKNKDVISYSSMITAFADHGKSQE 329
W F+R+ +D +S++++I+ F+ HG +
Sbjct: 202 TVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQ 261
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR-------VFGIKPLT 382
L MF++M N+G PN +T+ VL+AC+ ++ G + R VFG
Sbjct: 262 CLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFG----- 316
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
++D+ + G L+ A + ++ D +W +L+ V+ LGE A
Sbjct: 317 ---NGLIDMYAKCGCLDLAKRVFKSLREH-DHISWNSLITGV---VHFGLGEDA 363
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 251/481 (52%), Gaps = 43/481 (8%)
Query: 30 PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSI 88
PH H Y L L + G L A ++ D +P + + ++I + H +++
Sbjct: 91 PHKNAHSYNSLLAALARGRG-TLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEAL 149
Query: 89 LLYAKMHR---LG---VLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFD- 141
++A++ R LG V FT S +ACA + DA+ L +
Sbjct: 150 RVFAQLARDRGLGQQQVAIDRFTVVSAASACAG-----------------LRDARHLREL 192
Query: 142 ------SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
S E VI +AMV Y+ G ++ A+ +D+MT ++SV+W +MIAGY + +
Sbjct: 193 HGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASML 252
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
+A +VFD + DA W A+ + QNG + A+E+++ M E V + A+V + AC
Sbjct: 253 DDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGAC 312
Query: 256 TQLGDVEMAA-----ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
++G V IL + + G ++ NALI M+SKCG + A F R+ +D
Sbjct: 313 AKVGLVARGKEVHGFILRRSI--GSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERD 370
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+IS++SM+T F+ +G+ +++L +F +M + ++P VTF+ VLTACSH GLV DG + E
Sbjct: 371 IISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILE 430
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD---FCDAGTWGALLGACKVH 427
M G++P EH +D LGR+ QLE+A I G+WGALLGAC VH
Sbjct: 431 SMQD-HGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVH 489
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
N E+ E A L +L PE +G +L+NIY++ G+W D+ V+ ++ +K SW
Sbjct: 490 GNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSW 549
Query: 488 I 488
I
Sbjct: 550 I 550
>gi|297744558|emb|CBI37820.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 209/370 (56%), Gaps = 2/370 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I Y K + A+ LFD M ER+ ISW+ M++GY +M+ A + M +++T
Sbjct: 132 SMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLT 191
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +MI+G+ + G + A+ +F I + + W +M Y NG K A E+Y+ M +
Sbjct: 192 WNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGE 251
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ + +S C+ + + + + + + ++N+LI M+S+CG + A
Sbjct: 252 KPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIP-INNSLITMYSRCGAIVEART 310
Query: 302 EFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +K K+VIS+++MI +A HG + +AL++F M+ + P +TFI VL AC+H G
Sbjct: 311 IFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAG 370
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
V++G F+ M FGI+P EH +VD++GR GQLE+A LI D WGAL
Sbjct: 371 FVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGAL 430
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
LGAC+VH N EL +AA L++L PE + LL N+YA +G+W ++ ++MM+ +
Sbjct: 431 LGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIR 490
Query: 481 KSPGCSWISS 490
K PG SW+ S
Sbjct: 491 KQPGYSWVDS 500
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 167/344 (48%), Gaps = 59/344 (17%)
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI------ 186
MD+A +LFDSM ERNV+SW+AMV G+ G+++ A EF+ RM E++S + A++
Sbjct: 1 MDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAGLIQN 60
Query: 187 -------------------------------AGYGKCGEVREAKKVFDEIS--------- 206
AGYG+ G V +A+++FD+I
Sbjct: 61 GELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDG 120
Query: 207 ---EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
E + W +M +CYV+ +A ++ M++ + IS M IS ++ D+E
Sbjct: 121 GRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDT-ISWNTM---ISGYVRMSDMEE 176
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
A +L + + + N++I ++ G L+LA F+ I K+++S++SMI + +
Sbjct: 177 AWMLFQEM----PNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYEN 232
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
+G + A +++ +M +G +P++ T VL+ CS + G + + +T+ + P
Sbjct: 233 NGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKT--VIPDIP 290
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++ + R G + +A ++ + K + +W A++G H
Sbjct: 291 INNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFH 334
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 23/197 (11%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD++ K W ++I + H ++ L+ M RL V + TF SVLNACA
Sbjct: 308 ARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACA 367
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKAAKE 169
G+ K G M F SMA E + ++++V G ++ A +
Sbjct: 368 H---------AGFVKEGRMH-----FKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMD 413
Query: 170 FYDRMT-EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--EPDASC-WAAMTVCYVQNGY 225
+ M E + W A++ V A+ + + EP++S + + Y G
Sbjct: 414 LINSMPFEPDKAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQ 473
Query: 226 AKAAIEMYKVMRQENVR 242
A EM +M + N+R
Sbjct: 474 WDNATEMRMMMERNNIR 490
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/439 (34%), Positives = 228/439 (51%), Gaps = 43/439 (9%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
++L A +FD+IPK FLW LIR + + +I LY +M G+ FT V
Sbjct: 107 NSLRNAHHLFDKIPK-GNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFV 165
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L AC+ + ++ E + +R+ S ER+V +A+V YA
Sbjct: 166 LKACSALSTIGEGRVI----------HERVIRSGWERDVFVGAALVDMYA---------- 205
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
KCG V +A+ VFD+I + DA W +M Y QNG+ +
Sbjct: 206 ---------------------KCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDES 244
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ + M + VR +E +V IS+ + + + + V ALI M
Sbjct: 245 LSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDM 304
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG + +A F R++ K V+S++++IT +A HG + EALD+F +M E +P+ +TF
Sbjct: 305 YAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITF 363
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+G L ACS G L+++G + LM R I P EH TCMVDLLG GQL++A+ LI
Sbjct: 364 VGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMD 423
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D+G WGALL +CK H N EL E+A L+EL P+ +GN +LAN+YA GKW+
Sbjct: 424 VMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVAR 483
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ + KK+ CSWI
Sbjct: 484 LRQLMIDKGIKKNIACSWI 502
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 125/263 (47%), Gaps = 3/263 (1%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
++ Y C +R A +FD+I + + W + Y NG + AI +Y M + ++
Sbjct: 99 LVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPD 158
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ + AC+ L + ++ + V +R +V AL+ M++KCG + A F
Sbjct: 159 NFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFD 218
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+I ++D + ++SM+ A+A +G E+L + +M +G+ P + T + V+++ + +
Sbjct: 219 KIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPH 278
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G ++ G + + T ++D+ + G ++ A L ++ +W A++
Sbjct: 279 G-REIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREK-RVVSWNAIITGY 336
Query: 425 KVH-VNAELGEIAARHLLELGPE 446
+H + E ++ R + E P+
Sbjct: 337 AMHGLAVEALDLFERMMKEAQPD 359
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
++ L++ +S C L A F +I ++ ++ +I A+A +G + A+ ++ +M G
Sbjct: 95 LATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYG 154
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
++P+ T VL ACS + +G E + R G + +VD+ + G + A
Sbjct: 155 LKPDNFTLPFVLKACSALSTIGEGRVIHERVIRS-GWERDVFVGAALVDMYAKCGCVVDA 213
Query: 402 HSLIMDYKDFCDAGTWGALLGA 423
+ D DA W ++L A
Sbjct: 214 RHVFDKIVDR-DAVLWNSMLAA 234
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/500 (31%), Positives = 250/500 (50%), Gaps = 69/500 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR VFD++ + + W S+I +V + + ++ KM GV + TF+SV+
Sbjct: 245 LRDARDVFDKM-EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIK 303
Query: 112 ACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAE-RNVI 149
+CA + L + A++ +K MDDA LF M E +NV+
Sbjct: 304 SCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVV 363
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMT---------------------------------- 175
SW+AM++G G A + +M
Sbjct: 364 SWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTN 423
Query: 176 -EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E++S A++ Y K G +A KVF+ I D W+AM Y Q G + A +++
Sbjct: 424 YERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFH 483
Query: 235 VMRQENVRISEVAMVGAISACT------QLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
+ +E ++ +E I+AC + G A + ++ C VS+AL+
Sbjct: 484 QLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALC-----VSSALVT 538
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M++K G +D A F R K +D++S++SMI+ ++ HG++++AL++F +M+ ++ + VT
Sbjct: 539 MYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVT 598
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
FIGV+TAC+H GLVE G K F M I P +H +CM+DL R+G LEKA +I +
Sbjct: 599 FIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEM 658
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
A W LLGA +VH N ELGE+AA L+ L PE + LL+N+YA+ G W++
Sbjct: 659 PFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERT 718
Query: 469 IVKMMISETEKKKSPGCSWI 488
V+ ++ + + KK PG SWI
Sbjct: 719 NVRKLMDKRKVKKEPGYSWI 738
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 198/448 (44%), Gaps = 77/448 (17%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+N++ R+VFD++ + + WTSL+ + + + L+ +M GVL + +T S+V
Sbjct: 142 ENVNDGRRVFDEMGE-RNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTV 200
Query: 110 LNACAR----------------------VPSLLEAVICGYTKIGLMDDAQRLFDSMAERN 147
+ A +P + ++I Y+++G++ DA+ +FD M R+
Sbjct: 201 IAALVNEGVVGIGLQVHAMVVKHGFEEAIP-VFNSLISLYSRLGMLRDARDVFDKMEIRD 259
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMT-------------------------------- 175
++W++M+AGY G E +++M
Sbjct: 260 WVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQC 319
Query: 176 -------EKNSVTWVAMIAGYGKCGEVREAKKVFDEISE-PDASCWAAMTVCYVQNGYAK 227
+ + A++ KC E+ +A +F + E + W AM +QNG
Sbjct: 320 KALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGND 379
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A+ ++ MR+E V+ + ++ + EM A + K E R++ V AL+
Sbjct: 380 QAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYE----RSSSVGTALL 435
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
+ K G A + F I+ KD++++S+M+ +A G+++EA +F ++ EGI+PN+
Sbjct: 436 DAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEF 495
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC----MVDLLGRSGQLEKAHS 403
TF V+ AC+ + KQF + IK + C +V + + G ++ AH
Sbjct: 496 TFSSVINACASPTAAAEQGKQF----HAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHE 551
Query: 404 LIMDYKDFCDAGTWGALLGACKVHVNAE 431
+ K+ D +W +++ H A+
Sbjct: 552 VFKRQKER-DLVSWNSMISGYSQHGQAK 578
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 157/362 (43%), Gaps = 62/362 (17%)
Query: 55 ARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
A +FD+IP T L+ ++ ++++ L+ + + T S V N C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 114 ARV--PSLLEAVICGYTKIGLMD-------------------DAQRLFDSMAERNVISWS 152
A L V C K GL+D D +R+FD M ERNV+SW+
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 153 AMVAGYANCGNMKAAKEFYDRMT------------------------------------- 175
+++AGY+ G E + +M
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223
Query: 176 --EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
E+ + ++I+ Y + G +R+A+ VFD++ D W +M YV+NG E++
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M+ V+ + + I +C L ++ + ++ + V AL+ SKC
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKC 343
Query: 294 GYLDLAWREFSRIKN-KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
+D A FS ++ K+V+S+++MI+ +G + +A+++F +MR EG++PN T+ +
Sbjct: 344 KEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAI 403
Query: 353 LT 354
LT
Sbjct: 404 LT 405
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 11/246 (4%)
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+++ Y K V + ++VFDE+ E + W ++ Y NG E++ M+ E V
Sbjct: 133 SLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLP 192
Query: 244 SEVAMVGAISACTQLGDV----EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ + I+A G V ++ A++ KH E V N+LI ++S+ G L A
Sbjct: 193 NRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIP----VFNSLISLYSRLGMLRDA 248
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC-SH 358
F +++ +D ++++SMI + +G+ E ++F KM+ G++P +TF V+ +C S
Sbjct: 249 RDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASL 308
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
L Q + + F + +T ++ L + +++ A SL ++ + +W
Sbjct: 309 RELALVKLMQCKALKSGFTTDQIV--ITALMVALSKCKEMDDALSLFSLMEEGKNVVSWT 366
Query: 419 ALLGAC 424
A++ C
Sbjct: 367 AMISGC 372
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 124/280 (44%), Gaps = 10/280 (3%)
Query: 198 AKKVFDEISEPDASC--WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A +FD+I + + Y ++ K A+ ++ + +++ E + + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 256 TQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
D ++ + + V G D + V +L+ M+ K ++ R F + ++V+S+
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVS-VGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+S++ ++ +G ++F +M+ EG+ PN+ T V+ A + G+V G Q M
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGL-QVHAMVV 221
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL-GACKVHVNAELG 433
G + ++ L R G L A + D + D TW +++ G + + E+
Sbjct: 222 KHGFEEAIPVFNSLISLYSRLGMLRDARD-VFDKMEIRDWVTWNSMIAGYVRNGQDLEVF 280
Query: 434 EIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
EI + ++L K + A++ S ++ +VK+M
Sbjct: 281 EIFNK--MQLAGVKPTHMT-FASVIKSCASLRELALVKLM 317
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 232/440 (52%), Gaps = 20/440 (4%)
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV----- 123
F++ +LI+ V +H +S+ Y +M R V S +T+SS++ A A E++
Sbjct: 844 FVYNALIKGFVTCSHPIRSLEFYVRMLRDSVSPSSYTYSSLVQASAFASGFGESLQAHIW 903
Query: 124 --------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
I Y+ G + +A+++FD M ER+ ++W+ MV+ Y +M +A
Sbjct: 904 KFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANS 963
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++M EKN TW +I GY + G + A+ +F+++ D W M Y +N + A
Sbjct: 964 LANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREA 1023
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
I ++ M +E + EV M ISAC LG +E+ + + + Y+ +AL+ M
Sbjct: 1024 IAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDM 1083
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+SKCG L+ A F + K++ ++S+I A HG +QEAL MF KM E ++PN VTF
Sbjct: 1084 YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTF 1143
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ V TAC+H GLVE+G + + M + I EH CMV L ++G + +A LI +
Sbjct: 1144 VSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSME 1203
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SE 468
+A WGALL C++H N E+ EIA L+ L P +G LL ++YA +W+D +E
Sbjct: 1204 FEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAE 1263
Query: 469 IVKMMISETEKKKSPGCSWI 488
I M +K PG S I
Sbjct: 1264 IRGRMRELGIEKICPGTSSI 1283
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 24/197 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A VF +PK K F W S+I H ++++ ++AKM V + TF SV
Sbjct: 1089 SLERALLVFFNLPK-KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVF 1147
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE-----RNVISWSAMVAGYANCGNMK 165
AC T GL+++ +R++ SM + NV + MV ++ G +
Sbjct: 1148 TAC--------------THAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIY 1193
Query: 166 AAKEFYDRMT-EKNSVTWVAMIAGYGKCGEVREAKKVFDE--ISEPDASCWAAMTVC-YV 221
A E M E N+V W A++ G + A+ F++ I EP S + + V Y
Sbjct: 1194 EALELIGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYA 1253
Query: 222 QNGYAKAAIEMYKVMRQ 238
+ + E+ MR+
Sbjct: 1254 EQNRWRDVAEIRGRMRE 1270
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 253/501 (50%), Gaps = 75/501 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++P+ + W ++I + +++ ++ M R + + F +SVL+A
Sbjct: 172 ARKLFDRMPE-RNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALT 230
Query: 115 R---------------------VPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ S+ A++ Y K G +DDA R F+ ++N I+WSA
Sbjct: 231 SDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSA 290
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG--------------------- 188
MV GYA G+ A + +++M + T V +I
Sbjct: 291 MVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLG 350
Query: 189 --------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y KCG + +A+K F+ + +PD W ++ YVQNG + + +Y
Sbjct: 351 FGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYG 410
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ E V +E+ M + AC+ L ++ + + + + +AL M++KCG
Sbjct: 411 KMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCG 470
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
LD + F R+ ++DVIS+++MI+ + +G +AL++F KM EGI+P+ VTF+ +L+
Sbjct: 471 SLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLS 530
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV+ G + F++M F I P+ EH CMVD+L R+G+L +A K+F ++
Sbjct: 531 ACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEA-------KEFIES 583
Query: 415 GT-------WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
T W LLGACK H N ELG A L+ELG ++ LL++IY ++G ++
Sbjct: 584 ATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENV 643
Query: 468 EIVKMMISETEKKKSPGCSWI 488
E V+ ++ K PGCSWI
Sbjct: 644 ERVRRIMKARGVNKEPGCSWI 664
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 206/464 (44%), Gaps = 78/464 (16%)
Query: 50 DNLSYARQVFDQI-PKCKTQFLWTSLI----RNHVLHAHFRQSILLYAKMHRLG-VLTSG 103
++LS+A +FD I K W SLI +NH + +I L+ +M R V+ +
Sbjct: 60 NHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSF-AISLFRRMMRANNVIPNA 118
Query: 104 FTFSSVLNACARVPSLLE-------AVICG--------------YTKIGLMDDAQRLFDS 142
T + V +A + + ++ AV G Y K G + DA++LFD
Sbjct: 119 HTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDR 178
Query: 143 MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE-------------------------- 176
M ERN +SW+ M++GYA+ A E ++ M
Sbjct: 179 MPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTG 238
Query: 177 --------KNSVTWV-----AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
KN + + A++ Y KCG + +A + F+ + ++ W+AM Y Q
Sbjct: 239 RQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQG 298
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G + A++++ M V SE +VG I+AC+ L V + + YV
Sbjct: 299 GDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVL 358
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
+A++ M++KCG L A + F ++ DV+ ++S+IT + +G + L+++ KM+ E +
Sbjct: 359 SAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVI 418
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK---PLTEHLTCMVDLLGRSGQLEK 400
PN++T VL ACS ++ G KQ +G K P+ L+ M + G L+
Sbjct: 419 PNELTMASVLRACSSLAALDQG-KQMHARIIKYGFKLEVPIGSALSAMYT---KCGSLDD 474
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKV--HVNAELGEIAARHLLE 442
+ LI D +W A++ H N L E+ + LLE
Sbjct: 475 GY-LIFWRMPSRDVISWNAMISGLSQNGHGNKAL-ELFEKMLLE 516
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 168/361 (46%), Gaps = 68/361 (18%)
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE--RN 147
L+A++ + G ++S + ++ LN Y K + A LFDS+ + ++
Sbjct: 33 LHARILKTGSISSIYVTNTFLNL--------------YAKTNHLSHALTLFDSINDNDKD 78
Query: 148 VISWSAMVAGYAN---CGNMKAAKEFYDRMTEKNSVTWVA---------------MIAG- 188
+SW++++ ++ + A + RM N+V A ++AG
Sbjct: 79 DVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGK 138
Query: 189 ------------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
Y K G V +A+K+FD + E + WA M Y +
Sbjct: 139 QAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSD 198
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH---VDEGCCDRTNY 281
A A+E++++MR+E +E A+ +SA T DV + H + G +
Sbjct: 199 IADKAVEVFELMRREEEIQNEFALTSVLSALTS--DVFVYTGRQVHSLAIKNGLLAIVS- 255
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V+NAL+ M++KCG LD A R F +K+ I++S+M+T +A G S +AL +F KM + G
Sbjct: 256 VANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSG 315
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV-FGIKPLTEHLTCMVDLLGRSGQLEK 400
+ P++ T +GV+ ACS V +G + ++ FG++ L+ +VD+ + G L
Sbjct: 316 VLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYV--LSAVVDMYAKCGSLAD 373
Query: 401 A 401
A
Sbjct: 374 A 374
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 12/269 (4%)
Query: 163 NMKAAKEFYDRMTEKNSVTWV----AMIAGYGKCGEVREAKKVFDEISEPDAS--CWAAM 216
N+ + + R+ + S++ + + Y K + A +FD I++ D W ++
Sbjct: 26 NILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSL 85
Query: 217 TVCYVQNGYAKA---AIEMYK-VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
+ QN + + AI +++ +MR NV + + G SA + L DV
Sbjct: 86 INAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAV 145
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ C YV ++L++M+ K G++ A + F R+ ++ +S+++MI+ +A + +A++
Sbjct: 146 KTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVE 205
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F MR E N+ VL+A + V G +Q + G+ + +V +
Sbjct: 206 VFELMRREEEIQNEFALTSVLSALTSDVFVYTG-RQVHSLAIKNGLLAIVSVANALVTMY 264
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ G L+ A ++ ++ TW A++
Sbjct: 265 AKCGSLDDAVR-TFEFSGDKNSITWSAMV 292
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 230/452 (50%), Gaps = 30/452 (6%)
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG--VLTSGFTFSSVLNACARVPSLL---- 120
T + LIR + R +++L+A M G +T+ L +C+ LL
Sbjct: 85 TTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQ 144
Query: 121 -----------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
+ I Y++ G +DA R+FD M R+V+SW+AM+AG+A G
Sbjct: 145 IHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGL 204
Query: 164 MKAAKEFYDR-------MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
A E + + M + ++ + G K ++R ++VFD + + W AM
Sbjct: 205 FDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAM 264
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y N + A+E++ +M ++ V + + + C +L + + + +
Sbjct: 265 LAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNM 324
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+ NAL+ M++ CG L A F + +DVIS++S+I+A+ HG +EA+D+F K
Sbjct: 325 CPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEK 384
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M +G+EP+ + F+ VL ACSH GL+ DG F+ MT + I P EH TCMVDLLGR+G
Sbjct: 385 MLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAG 444
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
+ +A+ I + WGALL AC++H N ++G +AA +L L PE+TG LL+N
Sbjct: 445 CINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSN 504
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+YA G+W D V+ ++ KK PG S +
Sbjct: 505 MYARAGRWADVTSVRSVMVNKGIKKFPGTSIV 536
>gi|293336045|ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea mays]
gi|195615774|gb|ACG29717.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
gi|223946951|gb|ACN27559.1| unknown [Zea mays]
Length = 616
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 249/473 (52%), Gaps = 28/473 (5%)
Query: 30 PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSI 88
PH H Y L LL+ P D L A ++FD +P + + +L+ + H +++
Sbjct: 102 PHKNAHSYNTLLAALLRRP-DTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEAL 160
Query: 89 LLYAKMHRLGVLTSG-----FTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSM 143
+ A++ R L G FT SV ACA + G + L + + S
Sbjct: 161 RVVARLARDRFLGPGLAMDRFTVVSVATACAGI---------GAAR-PLREMHGAVVVSG 210
Query: 144 AERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFD 203
E VI +AM+ Y+ ++ A+ +D+++ +++VTW +MI+GY + ++ EA +VFD
Sbjct: 211 MEFTVIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFD 270
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
+ + D W A+ + QNG A+E+++ M + V + +V A+ AC +LG V
Sbjct: 271 MMPDKDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTR 330
Query: 264 AA-----ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
IL +++ G ++ NAL+ M+SKCG + A F + +D IS++SM+
Sbjct: 331 GKELHCFILRRNI--GSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMV 388
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
T F+ +G +++L +F +M G+ P VTF+ VLTACSH GLV +G E M G+
Sbjct: 389 TGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLVLESMED-HGV 447
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC---DAGTWGALLGACKVHVNAELGEI 435
+P EH +D LGR+ QLE+A I D AG+WGALLGAC++H N EL E
Sbjct: 448 EPRAEHYAAFIDALGRNHQLEEATEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEE 507
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A L L P +G +++NIYA+ G+W D+ V+ ++ E KK SWI
Sbjct: 508 VAEFLFRLEPGNSGRYVMMSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWI 560
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 217/410 (52%), Gaps = 43/410 (10%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMA----ERNVISWSAMVAGYANCGNMKAAKEFYDRM--- 174
A++ GY G ++A L M E ++I+W+ +V G+ G+ KAA EF+ RM
Sbjct: 434 AMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSM 493
Query: 175 -TEKNSVT-----------------------------------WVAMIAGYGKCGEVREA 198
+ N+ T A+I+ Y C + A
Sbjct: 494 GMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVA 553
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
VF E+S D W ++ Q+G + A+++ + M NV ++ V MV A+ AC++L
Sbjct: 554 CSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL 613
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
+ + + + D N++ N+LI M+ +CG + + R F + +D++S++ MI
Sbjct: 614 AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMI 673
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
+ + HG +A+++F + R G++PN +TF +L+ACSH GL+E+G K F++M + +
Sbjct: 674 SVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAM 733
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P E CMVDLL R+GQ + I +A WG+LLGAC++H N +L E AAR
Sbjct: 734 DPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAAR 793
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L EL P+ +GN L+ANIY++ G+W+D+ ++ ++ E K PGCSWI
Sbjct: 794 YLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 843
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 186/372 (50%), Gaps = 51/372 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++ + + F WT+++ + + ++I L+ M GV F F V AC+
Sbjct: 143 ARRMFDKMSE-RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACS 201
Query: 115 RVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ + + +++ + K G MD A+R F+ + ++V W+
Sbjct: 202 ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNI 261
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--- 206
MV+GY + G K A + M + + VTW A+I+GY + G+ EA K F E+
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 207 --EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+P+ W A+ QNGY A+ +++ M E V+ + + + A+SACT L
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS----- 376
Query: 265 AILAKHVDE--GCC------DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L +H E G C D V N+L+ ++KC +++A R+F IK D++S+++
Sbjct: 377 --LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNA 434
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV- 375
M+ +A G +EA+++ +M+ +GIEP+ +T+ G++T + G DG E R+
Sbjct: 435 MLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYG---DGKAALEFFQRMH 491
Query: 376 -FGIKPLTEHLT 386
G+ P T ++
Sbjct: 492 SMGMDPNTTTIS 503
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 101/201 (50%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y + G V +A+++FD++SE + W A+ Y G + I+++ +M E VR
Sbjct: 134 YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVF 193
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
AC++L + + + ++ + + V +++ M KCG +D+A R F I+
Sbjct: 194 PKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 253
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
KDV ++ M++ + G+ ++AL M+ G++P+QVT+ +++ + G E+ K
Sbjct: 254 KDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKY 313
Query: 369 FELMTRVFGIKPLTEHLTCMV 389
F M + KP T ++
Sbjct: 314 FLEMGGLKDFKPNVVSWTALI 334
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 123/309 (39%), Gaps = 72/309 (23%)
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
RLG + ++ C + S L V C + G ++DA+R+FD M+ERNV SW+A++
Sbjct: 106 RLGFQVHAQLVVNGVDVCEFLGSRLLEVYC---QTGCVEDARRMFDKMSERNVFSWTAIM 162
Query: 156 AGYANCG-----------------------------------NMKAAKEFYDRMT----E 176
Y G N + K+ YD M E
Sbjct: 163 EMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFE 222
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
NS +++ + KCG + A++ F+EI D W M Y G K A++ M
Sbjct: 223 GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDM 282
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ V+ +V IS Q G E A S + M G
Sbjct: 283 KLSGVKPDQVTWNAIISGYAQSGQFEEA------------------SKYFLEMG---GLK 321
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
D +V+S++++I +G EAL +F KM EG++PN +T ++AC
Sbjct: 322 DF---------KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC 372
Query: 357 SHGGLVEDG 365
++ L+ G
Sbjct: 373 TNLSLLRHG 381
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
D ++ + L+ ++ + G ++ A R F ++ ++V S+++++ + G +E + +F
Sbjct: 121 DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M NEG+ P+ F V ACS G ++ M + G + + ++D+ + G
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCG 239
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGA--CKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+++ A + +F D W ++ K L I+ L + P++ +A++
Sbjct: 240 RMDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
+ YA G+++++ + + + K SW +
Sbjct: 299 SG-YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/510 (31%), Positives = 261/510 (51%), Gaps = 36/510 (7%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R NQ K +H+ L+ + + + A LI LS R++FD+IPK
Sbjct: 41 RDHALNQGKHLHARLIVSGLASSNNF---ASKLISFYT-ETRQLSIVRKLFDRIPKPNF- 95
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE------- 121
+ T LI + H ++ + ++++M + + F SVL AC V L
Sbjct: 96 YQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPSVLRACGHVFDLQTGKILHSV 155
Query: 122 --------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
A+I Y++ ++ A+++FD M E+++++ +AMV GYA G K
Sbjct: 156 ILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMVLGYAQNGFAKEG 215
Query: 168 KEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASCWAAMTVC 219
++M + N VTW +I+G+ + G+ +++F +S EPD W ++
Sbjct: 216 FLLVEQMQMLDIKPNLVTWNTLISGFAQAGDKVMVQELFGLMSMHGFEPDVISWTSVISR 275
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
+VQN + +AA +K M Q + + + AC L +V L + +
Sbjct: 276 FVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGRELHGYAFAIGVEED 335
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-R 338
YV +A++ M+SKCG + A FS++ + ++++SMI +A+HG EA+++F +M +
Sbjct: 336 IYVRSAIVDMYSKCGLISEARMLFSKMPERHTVTWNSMIFGYANHGYCDEAIELFNQMEK 395
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
E + + ++F VLTACSHG LVE G F LM + I P EH CM+DLLGR+G+L
Sbjct: 396 TEAKKIDHLSFTAVLTACSHGRLVELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKL 455
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
+A+ +I D WGALLGAC+ H +L EIAARHL EL P GN+ LL+N+Y
Sbjct: 456 SEAYDMIKTMPVEPDLFVWGALLGACRQHGEIDLAEIAARHLAELEPRNAGNNMLLSNLY 515
Query: 459 ASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A G W++ +KM + +K S SWI
Sbjct: 516 ADAGSWENVAKLKMGKRKRLRKFS-AYSWI 544
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 246/472 (52%), Gaps = 27/472 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLL---------QLPGDNLSYAR 56
L+ + KT +QL Q+H+Y T+T +H L + L + L YA+
Sbjct: 22 LIKQCKTISQLHQLHAY---TITNTPLSFHSSPSLLTKFLYTLTTKAKSKSSTSLLHYAK 78
Query: 57 QVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV 116
+F+ I T F + ++IR H L + ++ + +M RL V +F L ACA++
Sbjct: 79 SIFNSIQNPST-FCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSHSFPFTLKACAQL 137
Query: 117 PSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+ A + C K G + D + ++++ GY A + +D
Sbjct: 138 GGVFSARCLHCQVLKFGFLSDLYVM------------NSLIHGYMVSDMSNDAYKVFDES 185
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+++ V++ +I G+ K G+V +A+++FD + D+ W + + Y + AIE++
Sbjct: 186 PQRDVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFD 245
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M +R VA+V +SAC QLG++E + +++ ++S L+ ++KCG
Sbjct: 246 FMMDLEIRPDNVALVSTLSACAQLGELEKGKKIHDYIERNAMKVDTFLSTGLVDFYAKCG 305
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+D+A + F +K++ ++++M+ A HG + L+ F +M G++P+ ++ +GVL
Sbjct: 306 CVDIALKIFDSSSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEAGVKPDGISILGVLV 365
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
CSH GLV++ K F+ M V+G+ +H CM DLLGR+G ++K +I D D
Sbjct: 366 GCSHSGLVDEARKLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMIKDMPRGGDM 425
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
W LLG C++H + E+ E AA+HL+EL P+ G ++LAN+YA+ +W+D
Sbjct: 426 SVWSGLLGGCRIHGDVEIAEKAAKHLMELKPDDGGVYSILANVYANAERWED 477
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 255/475 (53%), Gaps = 20/475 (4%)
Query: 17 KQVHSYLLKTLT--KPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
KQ+H+ ++++L P Y A ++ L G AR+VF + + + WT L
Sbjct: 314 KQLHAQVIRSLPCIDP-----YVASAMVELYAKCG-CFKEARRVFSSL-RDRNTVSWTVL 366
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMD 134
I + + F +S+ L+ +M + F +++++ C+ +C ++ +
Sbjct: 367 IGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSN-----RMDMCLARQLHSLS 421
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
S R V+ +++++ YA CGN++ A+ + M E++ V+W M+ Y + G
Sbjct: 422 -----LKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGN 476
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE-VAMVGAIS 253
+ +A++ FD +S + W AM Y+Q+G + ++MY M E I + V V
Sbjct: 477 IGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFR 536
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
C +G ++ + H + V NA+I M+SKCG + A + F + KD++S
Sbjct: 537 GCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVS 596
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
+++MIT ++ HG ++A+++F M +G +P+ ++++ VL++CSH GLV++G F+++
Sbjct: 597 WNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLK 656
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
R + P EH +CMVDLL R+G L +A +LI + A WGALL ACK H N EL
Sbjct: 657 RDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELA 716
Query: 434 EIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+AA+HL +L +G LLA IYA GK DS V+ ++ + KK+PG SW+
Sbjct: 717 ELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWM 771
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 170/399 (42%), Gaps = 64/399 (16%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSV 109
+LS A ++F ++P+ + W +L+ + F ++ + M R G L + FTF
Sbjct: 110 SLSDAEELFGRMPR-RDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCA 168
Query: 110 LNACARV---------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNV 148
+ +C + P + ++ + + G +D A + F + V
Sbjct: 169 MKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTV 228
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP 208
++M+AGYA + A E ++ M E++ V+W M++ + G REA V
Sbjct: 229 FCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSV------- 281
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
A++M+ VR+ +++AC +L + L
Sbjct: 282 --------------------AVDMH----NRGVRLDSTTYTSSLTACAKLSSLGWGKQLH 317
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
V YV++A++ +++KCG A R FS +++++ +S++ +I F +G
Sbjct: 318 AQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFS 377
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC--KQFELMTRVFGIKPLTEHLT 386
E+L++F +MR E + +Q +++ CS+ D C +Q ++ G
Sbjct: 378 ESLELFNQMRAELMTVDQFALATIISGCSN---RMDMCLARQLHSLSLKSGHTRAVVISN 434
Query: 387 CMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGA 423
++ + + G L+ A S+ M+ +D +W +L A
Sbjct: 435 SLISMYAKCGNLQNAESIFSSMEERDIV---SWTGMLTA 470
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 151/313 (48%), Gaps = 16/313 (5%)
Query: 119 LLEAVICGYTKIGLMDDAQRLF-DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
L ++ Y G + DA+ L + E NVI+ + M+ GYA G++ A+E + RM +
Sbjct: 65 LQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRR 124
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV-CYVQN----GYAKAAIEM 232
+ +W +++GY + G +A + F + S A T C +++ G+ + A+++
Sbjct: 125 DVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQL 184
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
++ + + G + + G V+ A+ ++ T + N+++ ++K
Sbjct: 185 LGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIER----PTVFCRNSMLAGYAK 240
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
+D A F + +DV+S++ M++A + G+++EAL + + M N G+ + T+
Sbjct: 241 SYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSS 300
Query: 353 LTACSHGGLVEDGCKQF--ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
LTAC+ + G KQ +++ + I P + MV+L + G ++A + +D
Sbjct: 301 LTACAKLSSLGWG-KQLHAQVIRSLPCIDPYVA--SAMVELYAKCGCFKEARRVFSSLRD 357
Query: 411 FCDAGTWGALLGA 423
+ +W L+G
Sbjct: 358 R-NTVSWTVLIGG 369
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 244/456 (53%), Gaps = 19/456 (4%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
+ LI + GD +S ARQ F++I K WTSL+ +V H+R+++ LY +M
Sbjct: 90 FVGSALINMYARCGD-VSSARQAFEKIQN-KHVVCWTSLMTAYVQTGHYREALDLYGRMD 147
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLE--AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
GV G T+ + L ACA + +L E A+ ++ G ++++ +A
Sbjct: 148 HEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGF-------------QSLVVHTA 194
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
++ YA CG + AA+ ++R+ N A++ Y KCG + AK F+ D W
Sbjct: 195 LLTMYAKCGELDAARAVFNRLA-SNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSW 253
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILAKHVD 272
AM Y Q+G + A+++Y+ M + V EV + ++SAC G +++ I ++ +
Sbjct: 254 NAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLK 313
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ V AL++M+ +CG L+ A F + +DV+S+++M + +A G + + LD
Sbjct: 314 NQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLD 373
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
++L+M GI PN++TF +L CSH GL+ G + F M + P+ EH CMVDLL
Sbjct: 374 LYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLL 433
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GRSG+L A +L+ D+ W +LG+CK H +A+ + AAR + EL PE T +
Sbjct: 434 GRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYS 493
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL++I+ + G +++ V++ + E KK PG S I
Sbjct: 494 LLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLI 529
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 172/361 (47%), Gaps = 71/361 (19%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTW 182
Y K G +++A+++FD + R+ +SW++M++ YAN G A + Y +M + +S+T+
Sbjct: 2 YGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITF 61
Query: 183 V-------------------------------AMIAGYGKCGEVREAKKVFDEISEPDAS 211
A+I Y +CG+V A++ F++I
Sbjct: 62 TSALLACTKLADGKAIHARIVSSNMESDFVGSALINMYARCGDVSSARQAFEKIQNKHVV 121
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA------- 264
CW ++ YVQ G+ + A+++Y M E V V V A+ AC LG ++
Sbjct: 122 CWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRV 181
Query: 265 ------------AILAKHVDEGCCDRTN----------YVSNALIHMHSKCGYLDLAWRE 302
A+L + G D V NAL+ M++KCG L+LA
Sbjct: 182 SECGFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSA 241
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F KD++S+++MI A+A HG +EALD++ M ++G+ P++VT L+AC+ G +
Sbjct: 242 FEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSL 301
Query: 363 EDGCKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
+ G E+ +RV + L T +V++ GR G+LE A S+ D D +W A
Sbjct: 302 QLG---REIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQR-DVLSWTA 357
Query: 420 L 420
+
Sbjct: 358 M 358
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 50/69 (72%)
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG ++ A + F IKN+D +S++SMI+++A++G EALD++ +M +GI+P+ +T
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSIT 60
Query: 349 FIGVLTACS 357
F L AC+
Sbjct: 61 FTSALLACT 69
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 238/435 (54%), Gaps = 13/435 (2%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD+ K L+ +++ N+V R+ + + +M + G T S ++AC+
Sbjct: 294 ARKIFDECVD-KNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACS 352
Query: 115 RVPSLLEAVICGYTKIG-LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
L+ V CG G ++ + +D++ +A++ Y CG + A +DR
Sbjct: 353 E----LDDVSCGKWCHGYVLRNGLEGWDNVC-------NAIINMYMKCGKQEMACRVFDR 401
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M K V+W ++IAG+ + G++ A K+F + + D W M VQ K AIE++
Sbjct: 402 MLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELF 461
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+VM+ E + +V MVG SAC LG +++A + ++ + ++ AL+ M ++C
Sbjct: 462 RVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARC 521
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G A + F+++ +DV ++++ I A A G A+++F +M +GI+P+ V F+ +L
Sbjct: 522 GDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALL 581
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
TA SHGGLVE G F M ++GI P H CMVDLLGR+G L +A SLI + +
Sbjct: 582 TALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPN 641
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WG+LL AC+VH N ++ AA + EL PE+TG LL+NIYAS G+W D V++
Sbjct: 642 DVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLH 701
Query: 474 ISETEKKKSPGCSWI 488
+ E K PG S I
Sbjct: 702 LKEKGAHKMPGSSSI 716
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 225/525 (42%), Gaps = 114/525 (21%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--DNLSYARQVFDQIPK-- 64
+ KT +LKQ+HS + K H LI G ++L YA++ + +
Sbjct: 42 KCKTMTELKQLHSQITKNGLNHHP---LSLTNLISSCTEMGTFESLEYAQKALELFIEDN 98
Query: 65 --CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE- 121
T ++++SLIR ++I+++ ++ +G + FTF VL+AC + +L E
Sbjct: 99 GIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEG 158
Query: 122 --------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
++I Y + G +D +R+FD M+ERNV+SW++++ GYA
Sbjct: 159 FQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKR 218
Query: 162 GNMKAAKEFYDRMTE----KNSVTWVAMIAG----------------------------- 188
G K A + M E NSVT V +I+
Sbjct: 219 GCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMV 278
Query: 189 ------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
Y KCG + +A+K+FDE + + + + YV+ G A+ + + M + R
Sbjct: 279 NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPR 338
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+ M+ A+SAC++L DV +V + + V NA+I+M+ KCG ++A R
Sbjct: 339 PDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRV 398
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQ-------------------------------EAL 331
F R+ NK +S++S+I F +G + EA+
Sbjct: 399 FDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAI 458
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG-IKPLTEHL----- 385
++F M++EGI ++VT +GV +AC + G +L + G IK H
Sbjct: 459 ELFRVMQSEGITADKVTMVGVASACGYLG-------ALDLAKWIHGYIKKKDIHFDMHLG 511
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
T +VD+ R G + A + D W A +GA + N
Sbjct: 512 TALVDMFARCGDPQSAMQVFNKMVKR-DVSAWTAAIGAMAMEGNG 555
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 233/443 (52%), Gaps = 26/443 (5%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----------- 119
WTS+I + + ++ Y +M + GV+ FTF S++ AC+ + +
Sbjct: 9 WTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 68
Query: 120 ----------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
A+I YTK L+ DA +F MA R++ISW +M+AG++ G A
Sbjct: 69 KSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALC 128
Query: 170 FYDRMTEK---NSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGY 225
++ M + + V W A+IAG+ GE+R+A F+E+ D W A+ +++
Sbjct: 129 YFKEMLHQGRPDLVAWNAIIAGFAY-GELRDAIFFFEEMRCNADLVSWNAILTACMRHDQ 187
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
A+ + K+M R + + + A + +E+ + + + + V+N
Sbjct: 188 AEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNG 247
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
LI +++KCG L A + F + N DV+S+SS+I +A G +EAL +F MR ++PN
Sbjct: 248 LIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPN 307
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
VTF+GVLTACSH GLVE+G K + M + FGI P EH +CMVDLL R+G L +A I
Sbjct: 308 HVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFI 367
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
D W LL ACK H N ++G+ AA ++L++ P + LL NIYAS G W+
Sbjct: 368 HQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWE 427
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D ++ ++ + +K PG SWI
Sbjct: 428 DVARLRSLMKQRGVRKVPGQSWI 450
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ E + W ++ Y QNG A+E Y M Q V + I AC+ LGD+ +
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
L HV + NALI M++K + A FSR+ +D+IS+ SMI F+
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
G EAL F +M ++G P+ V + ++ ++G EL +F E
Sbjct: 121 GYELEALCYFKEMLHQG-RPDLVAWNAIIAGFAYG----------ELRDAIF----FFEE 165
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
+ C DL+ +W A+L AC H AE
Sbjct: 166 MRCNADLV-----------------------SWNAILTACMRHDQAE 189
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 135/289 (46%), Gaps = 19/289 (6%)
Query: 143 MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREA 198
M ERNV+SW++++AGY+ G A EFY +M + + T+ ++I G++
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 199 KKVFDEI--SEPDASCWA--AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+++ + SE A A A+ Y ++ A++++ M ++ IS +M+ S
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDL-ISWGSMIAGFS- 118
Query: 255 CTQLG-DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK-NKDVI 312
QLG ++E + + +G D + NA+I + G L A F ++ N D++
Sbjct: 119 --QLGYELEALCYFKEMLHQGRPDLVAW--NAIIAGFAY-GELRDAIFFFEEMRCNADLV 173
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S+++++TA H +++E + M P+ +T VL A + +E G Q
Sbjct: 174 SWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIG-NQVHCY 232
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G+ T ++DL + G L+ AH I D D +W +L+
Sbjct: 233 ALKTGLNCDTSVTNGLIDLYAKCGSLKTAHK-IFDSMINPDVVSWSSLI 280
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 250/502 (49%), Gaps = 55/502 (10%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
L+ L P + +AR++FD P FL S+I+ +V + +S LY + R
Sbjct: 25 LLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSF 84
Query: 101 T-SGFTFSSVLNACARVPSLLE---------------------AVICGYTKIGLMDDAQR 138
T FTFS + +CA ++ E A++ Y K G MD A++
Sbjct: 85 TPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARK 144
Query: 139 LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREA 198
LFD M +R+ +SW+A++ GY G+M A + +D+M EK+S + MI Y K G++ A
Sbjct: 145 LFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSA 204
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN------------------ 240
+K+FDE+ E W M Y NG +A ++ M ++N
Sbjct: 205 RKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPY 264
Query: 241 --------------VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ EV +V + A LG +++ + + V DR V AL
Sbjct: 265 EALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDRATNVGTAL 324
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M++KCG + + F + K+ S++++I AFA +G+++EAL +F++M ++G PN+
Sbjct: 325 IDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNE 384
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+T IGVL+AC+H GLVE+G + F+ M FG+ P EH CMVDLLGR+G L++A L+
Sbjct: 385 ITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGCMVDLLGRAGCLQEAEKLME 443
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ + L AC + E + +++ GN +L N+YA+ +WK+
Sbjct: 444 SMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKE 503
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
++ VK ++ KK GCS I
Sbjct: 504 ADEVKGLMRRNGVKKEAGCSAI 525
>gi|223948849|gb|ACN28508.1| unknown [Zea mays]
gi|413937254|gb|AFW71805.1| hypothetical protein ZEAMMB73_337002 [Zea mays]
Length = 608
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 249/473 (52%), Gaps = 28/473 (5%)
Query: 30 PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSI 88
PH H Y L LL+ P D L A ++FD +P + + +L+ + H +++
Sbjct: 94 PHKNAHSYNTLLAALLRRP-DTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEAL 152
Query: 89 LLYAKMHRLGVLTSG-----FTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSM 143
+ A++ R L G FT SV ACA + G + L + + S
Sbjct: 153 RVVARLARDRFLGPGLAMDRFTVVSVATACAGI---------GAAR-PLREMHGAVVVSG 202
Query: 144 AERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFD 203
E VI +AM+ Y+ ++ A+ +D+++ +++VTW +MI+GY + ++ EA +VFD
Sbjct: 203 MEFTVIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFD 262
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
+ + D W A+ + QNG A+E+++ M + V + +V A+ AC +LG V
Sbjct: 263 MMPDKDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLVTR 322
Query: 264 AA-----ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
IL +++ G ++ NAL+ M+SKCG + A F + +D IS++SM+
Sbjct: 323 GKELHCFILRRNI--GSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMV 380
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
T F+ +G +++L +F +M G+ P VTF+ VLTACSH GLV +G E M G+
Sbjct: 381 TGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLVLESMED-HGV 439
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC---DAGTWGALLGACKVHVNAELGEI 435
+P EH +D LGR+ QLE+A I D AG+WGALLGAC++H N EL E
Sbjct: 440 EPRAEHYAAFIDALGRNHQLEEATEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEE 499
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A L L P +G +++NIYA+ G+W D+ V+ ++ E KK SWI
Sbjct: 500 VAEFLFRLEPGNSGRYVMMSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWI 552
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 243/451 (53%), Gaps = 32/451 (7%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVL----HAHFRQSILLYAKMHRLGVLTSGFTF 106
+L YA VF P T +L ++IR L +AH +I +Y K FTF
Sbjct: 62 HLRYAYSVFTHQPFPNT-YLHNTMIRALSLVDERNAH-SIAITVYRKFWAFCAKPDTFTF 119
Query: 107 SSVLNACARVPSLL-------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
VL RV + +AV+ G FDS +V + ++ Y+
Sbjct: 120 PFVLKIVVRVSDVWFGRQVHGQAVVFG-------------FDS----SVHVVTGLIQMYS 162
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--EPDASCWAAMT 217
+CG + A++ +D M ++ W A++AGYGK GE+ EA+ + + + +A W +
Sbjct: 163 SCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVI 222
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
Y ++G A AIE+++ M ENV EV ++ +SAC LG +E+ + +VD +
Sbjct: 223 SGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMN 282
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
R ++NA+I M++K G + A F + ++V++++++IT A HG EAL MF +M
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLATHGHGAEALVMFDRM 342
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
G++PN VTFI +L+ACSH G V+ G + F M +GI P EH CM+DLLGR+G+
Sbjct: 343 VKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGK 402
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
L +A +I +A WG+LL A VH + ++GE A L++L P +GN LLAN+
Sbjct: 403 LREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDVGERALYQLIKLEPNNSGNYMLLANL 462
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
Y+++G+W +S +++ M+ KK G S I
Sbjct: 463 YSNLGRWDESRMMRKMMKGIGVKKLAGESSI 493
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/378 (36%), Positives = 223/378 (58%), Gaps = 31/378 (8%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK---- 177
A++ Y K G++D+A ++FD + E++V+SW+AMV GY+ G + A +++M E+
Sbjct: 53 ALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIEL 112
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
N V+W A+IA + + G E VF E+ Q+G A A+E++ M
Sbjct: 113 NVVSWSAVIAAFAQRGLGCETLDVFREM----------------QHGEANDALELFSWMF 156
Query: 238 QEN--VRISEVAMVGAISACTQLGDVEM-----AAILAKHVDEGCCDRTNYVSNALIHMH 290
+++ V+ + + A+ AC +L + + A IL H D YV+N LI M+
Sbjct: 157 KQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFL----YVANCLIDMY 212
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+K G +D+A F +K K+ +S++S++T + HG+ +EAL++F +MR G++P+ VT +
Sbjct: 213 AKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLL 272
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
VL ACSH G+++ G + F M++ FG+ P EH CMVDLLGR+G+L +A LI +
Sbjct: 273 VVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQM 332
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
+ W ALL C++H N ELGE AA+ LLEL E G+ LL+NIYA+ +WKD V
Sbjct: 333 EPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANARRWKDVARV 392
Query: 471 KMMISETEKKKSPGCSWI 488
+ ++ + +K PGCSW+
Sbjct: 393 RSLMKNSGIRKRPGCSWV 410
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 79/134 (58%), Gaps = 5/134 (3%)
Query: 240 NVRISEVAMVGAISACTQLGD-VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
++R V++V + AC +G + A+ V G + +V NAL+ M++KCG +D
Sbjct: 8 DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDL-FVGNALVDMYAKCGMVDE 66
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A + F RIK KDV+S+++M+ ++ G+ ++AL +F KMR E IE N V++ V+ A +
Sbjct: 67 ASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQ 126
Query: 359 GGLVEDGCKQFELM 372
GL GC+ ++
Sbjct: 127 RGL---GCETLDVF 137
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+Q+H+Y+L+ + Y A LI + GD + AR VFD + K K WTSL+
Sbjct: 186 RQIHAYILRN--HFDSAFLYVANCLIDMYAKSGD-IDVARFVFDNL-KQKNFVSWTSLMT 241
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ +H ++++ ++ +M R+G+ G T VL AC+ G++D
Sbjct: 242 GYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHS--------------GMIDQG 287
Query: 137 QRLFDSMA-ERNVIS----WSAMVAGYANCGNMKAAKEFYDRMT-EKNSVTWVAMIAGYG 190
F+SM+ E VI ++ MV G + A E + M E +S+ WVA+++G
Sbjct: 288 IEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCR 347
Query: 191 KCGEVR----EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
V AK++ + SE D S + ++ Y K + +M+ +R
Sbjct: 348 IHANVELGEHAAKQLLELNSENDGS-YTLLSNIYANARRWKDVARVRSLMKNSGIR 402
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 104 FTFSSVLNACARVPSL----------------------LEAVICGYTKIGLMDDAQRLFD 141
FT S L ACAR+ +L +I Y K G +D A+ +FD
Sbjct: 167 FTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFD 226
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVRE 197
++ ++N +SW++++ GY G K A E +D M + + VT + ++ G + +
Sbjct: 227 NLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQ 286
Query: 198 AKKVFDEISE-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
+ F+ +S+ P +A M + G A+E+ + M+ E S + V +
Sbjct: 287 GIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEP---SSIVWVALL 343
Query: 253 SACTQLGDVEMAAILAKHVDE 273
S C +VE+ AK + E
Sbjct: 344 SGCRIHANVELGEHAAKQLLE 364
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 216/366 (59%), Gaps = 4/366 (1%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A I GY G + DA+R+FD M R+ +S+++M+ GYA G++ +A+ ++R+ VT
Sbjct: 51 AFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFERVLAPTPVT 110
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +M+AG+ + G+V A++VF+E+ E D W AM V N A+ +++ M +E
Sbjct: 111 WTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWMMEEGF 170
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ +V +SACT G +E + V++ ++ AL+ M++KCG ++LA
Sbjct: 171 VPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKCGAVELALE 230
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR-NEGIEPNQVTFIGVLTACSHGG 360
F+ ++ ++ ++++MI A +G S +ALDMF +M N + P++VTF+GVL ACSH G
Sbjct: 231 VFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAG 290
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
V+ G + F + + +G++ + EH CMVDLL RSG L++AH LI + D W AL
Sbjct: 291 FVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRAL 350
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
LG C++H N ++ E + E+ +G+ LL+N+YA++G+W E V+ + +
Sbjct: 351 LGGCRLHKNVKMAENV---ISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRRTMRSKGIE 407
Query: 481 KSPGCS 486
K PGCS
Sbjct: 408 KIPGCS 413
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 101/249 (40%), Gaps = 61/249 (24%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD +P+ T F I YA +G ++ F VL A
Sbjct: 65 ARRVFDGMPRRDT--------------VSFNSMIHGYAVSGDVG--SAQRLFERVL---A 105
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG----------------- 157
P +++ G+ + G ++ A+R+F+ M ER+++SW+AM++G
Sbjct: 106 PTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLFRWM 165
Query: 158 ------------------YANCGNMKAAKEFYDRMTEKNSVTW-----VAMIAGYGKCGE 194
G ++ K + EK + W A++ Y KCG
Sbjct: 166 MEEGFVPNRGTVVSVLSACTGAGALETGK-WVHVFVEKKRLRWDEFLGTALVDMYAKCGA 224
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR-QENVRISEVAMVGAIS 253
V A +VF + + W AM NGY+ A++M++ M V EV VG +
Sbjct: 225 VELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLL 284
Query: 254 ACTQLGDVE 262
AC+ G V+
Sbjct: 285 ACSHAGFVD 293
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
C RTN NA I + G + A R F + +D +S++SMI +A G A +F
Sbjct: 45 CTRTN---NAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRLFE 101
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
++ + P VT+ ++ G VE + FE M
Sbjct: 102 RV----LAPTPVTWTSMVAGFCRAGDVESARRVFEEM 134
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 219/411 (53%), Gaps = 39/411 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK----------- 165
P +L +++ Y K GL+ AQR+FD M + + W+A++ Y + G+++
Sbjct: 106 PHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFA 165
Query: 166 -----------------------AAKEFYDRMTEKNSVTWVAMIAG-----YGKCGEVRE 197
A E R E+ V +A Y KCGE+ +
Sbjct: 166 NGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAK 225
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A++VFD++ DA W AM Y NG+ + A++++ M+ E ++ A+ GA+SACT+
Sbjct: 226 AREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTR 285
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
LG +++ + VD + ALI M++KCG AW F +++ KD+I +++M
Sbjct: 286 LGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAM 345
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I G + A + +M G++ N TFIG+L +C+H GL++DG + F MT+++
Sbjct: 346 ILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYH 405
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I P EH CMVDLL R+G L++AH L+ D +A GALLG CK+H N EL E
Sbjct: 406 ISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVL 465
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ L+ L P +GN +L+NIY++ G+W+D+ +++ + +K P CSW+
Sbjct: 466 KQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 516
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 124/310 (40%), Gaps = 73/310 (23%)
Query: 17 KQVHSYLLK--TLTKPHDQYHYYAQFLIRLLQLPGDN--LSYARQVFDQIPKCKTQFLWT 72
+Q+H+ LK + T PH L LL L L A++VFD++P T WT
Sbjct: 91 EQLHARSLKLPSHTNPH--------VLTSLLSLYAKCGLLHRAQRVFDEMPHPST-VPWT 141
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE----------- 121
+LI ++ R+++ + G+ FT VL ACAR+ L
Sbjct: 142 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQE 201
Query: 122 ----------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A + Y K G M A+ +FD M ++ ++W AMV GYA+ G+ + A + +
Sbjct: 202 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 261
Query: 172 DRMTEK---------------------------------------NSVTWVAMIAGYGKC 192
M + N V A+I Y KC
Sbjct: 262 LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKC 321
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G EA VF ++ + D W AM + G+ K A + M + V++++ +G +
Sbjct: 322 GSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLL 381
Query: 253 SACTQLGDVE 262
+CT G ++
Sbjct: 382 CSCTHTGLIQ 391
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 213/399 (53%), Gaps = 39/399 (9%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC-GNMKAAKEFYDRMTE----KNSVT 181
Y K GL+DDA R+FD M RNV++W+ +VA A+ G + A F M N+ T
Sbjct: 114 YAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYT 173
Query: 182 WVA--------------------------------MIAGYGKCGEVREAKKVFDEISEPD 209
+ + +I Y K G++ ++VFDE+ D
Sbjct: 174 FSSVLGACTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRD 233
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
W ++ + Q+G AIE++ M+ ++ + + ACT + +E +
Sbjct: 234 LVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHA 293
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
HV + DR + NAL+ M+ KCG L+ A F R+ +DVIS+S+M++ A +GKS E
Sbjct: 294 HVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVE 351
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL +F M+++G+ PN VT +GVL ACSH GLVEDG F M R+FGI+P EH CMV
Sbjct: 352 ALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMV 411
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLGR+G+L++A I D+ W LLGAC++H NA L AAR +L+L P+ G
Sbjct: 412 DLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQG 471
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+N YA + +W D+E + + +K PG SWI
Sbjct: 472 ARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWI 510
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 119/268 (44%), Gaps = 59/268 (22%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLY-AKMHRLGVLTSGFTFSSVL 110
L A ++FD +P + WT+++ +Q L + M R GV + +TFSSVL
Sbjct: 120 LDDALRMFDGMP-VRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVL 178
Query: 111 NACARVPSLLEAV-------------------ICGYTKIGLMDDAQRLFDSMAERNVISW 151
AC P +L AV I Y K+G +D +R+FD M R+++ W
Sbjct: 179 GACT-TPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237
Query: 152 SAMVAGYANCGNMKAAKEFYDRM------TEKNSVTWV---------------------- 183
++++AG+A G+ A E + RM + + ++T V
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK 297
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
A++ Y KCG + +A +F + + D W+ M QNG + A+ ++
Sbjct: 298 YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFD 357
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVE 262
+M+ + V + V MVG + AC+ G VE
Sbjct: 358 LMKSQGVAPNHVTMVGVLFACSHAGLVE 385
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 37/263 (14%)
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVD-EGCCDRTN----YVSNALIHMHSKCGYL 296
R V++ + C + G + ++ +HV+ G +VSN+L M++K G L
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120
Query: 297 DLAWREFSRIKNKDVISYSSMITAFAD-HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
D A R F + ++V+++++++ A A G+ QEAL + MR +G+ PN TF VL A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180
Query: 356 CSHGGL---VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG------------------- 393
C+ G+ V + L + VF L + + DL G
Sbjct: 181 CTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSI 240
Query: 394 -----RSGQLEKAHSLIMDYKDF---CDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
+SG A L M KD + GT ++L AC V E G H+L+
Sbjct: 241 IAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYDR 300
Query: 446 EKTGNSALLANIYASMGKWKDSE 468
+ ++ALL ++Y G +D++
Sbjct: 301 DLILHNALL-DMYCKCGSLEDAD 322
>gi|125540362|gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indica Group]
Length = 493
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 228/415 (54%), Gaps = 28/415 (6%)
Query: 95 HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGL---------------------M 133
HRL L + S L+ C+R+PS A + + L +
Sbjct: 65 HRL--LPDHLSLSFSLHPCSRLPSHPVASVVHSLAVRLGHARDVYVVNAAASAYFAAADV 122
Query: 134 DDAQRLFDSMAERNV---ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
A+RLF S A R+V ++W+ MV G+AN G+++ A+ F+D M EKN V+W M+ Y
Sbjct: 123 ASAERLF-SEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAYA 181
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
+ G + +A+K+FD + +A+ W +M +Q+ + + A+ ++ M V +E A+V
Sbjct: 182 RAGMLPKARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVACGVVPNEPALVS 241
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYV-SNALIHMHSKCGYLDLAWREFSRIKNK 309
+SACTQL +E + + + + V + A++ M+ KCG + A R F+ + +
Sbjct: 242 TVSACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCGSIRDAVRVFAAMPVR 301
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
++ S++SMI A +G ++AL +F KM+ G+ PN +TFIG+L+ACSH GLV++G F
Sbjct: 302 NIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLF 361
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M FGI+P+ EH MVDLLGRSG + +A + G WGAL GACK+H
Sbjct: 362 YKMVNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVEPHPGLWGALAGACKIHGE 421
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
ELGE A+ L+EL P+ LL+NIYA+ +W D V+ ++ + + K G
Sbjct: 422 VELGEEVAKKLIELEPQHGSRYILLSNIYATSNRWDDMANVRRILKDRKVPKGTG 476
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD++P + W S+I + H +++ +++ M GV+ + S ++
Sbjct: 186 LPKARKLFDRMPS-RNAATWGSMITGLLQSDHCEEALRVFSDMVACGVVPNEPALVSTVS 244
Query: 112 ACARV----------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC ++ L A++ Y K G + DA R+F +M RN+
Sbjct: 245 ACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCGSIRDAVRVFAAMPVRNIY 304
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
SW++M+AG A G+ + A + +M N +T++ +++ G V E + +F ++
Sbjct: 305 SWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLFYKM 364
Query: 206 S-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS-ACTQLG 259
+P + M ++G+ + A++ K M E + GA++ AC G
Sbjct: 365 VNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVE----PHPGLWGALAGACKIHG 420
Query: 260 DVEMAAILAKHVDE 273
+VE+ +AK + E
Sbjct: 421 EVELGEEVAKKLIE 434
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 228/442 (51%), Gaps = 21/442 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL--GVLTSGFTFSSVLNA 112
A + DQ+PK + SLI H ++S+ ++ M + VL FT S++ +
Sbjct: 99 AHNLLDQMPK-PNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGS 157
Query: 113 CARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
CA + P LL V IGL N+I +A++ Y CG +
Sbjct: 158 CASLGAPELLRQVHGAAIIIGL------------NSNIIIGNALIDAYGKCGEPDISFSI 205
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+ RM E++ V+W +M+A Y + + +A +F ++ E + W A+ + QNG A+
Sbjct: 206 FSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEAL 265
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR---TNYVSNALI 287
+++ MR+E + S +SAC L + + H+ C ++ NALI
Sbjct: 266 HLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALI 325
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+ KCG + A F + KD++S++S+IT FA +G +E+L +F +M I PN V
Sbjct: 326 DMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHV 385
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+G+L+AC H GLV +G + + M + +G+ P ++H M+DLLGR+ +LE+A LI
Sbjct: 386 TFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKR 445
Query: 408 YKDFCD-AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
D G WGALLGAC++H N +L AA L +L P ++ NIYA+ +W +
Sbjct: 446 APKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRWDE 505
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
+ V+ ++ E +K CSWI
Sbjct: 506 ARQVRRLMMERGLRKEAACSWI 527
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 165/394 (41%), Gaps = 97/394 (24%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
++SLI + H + LL++ + ++ + F L +I Y+K
Sbjct: 17 YSSLISKCITTRHLKLGKLLHSHFIKTALIFTTF--------------LANRLIDFYSKC 62
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
+ A ++F + +N SW+ +++ Y+ G A D+M + N V++ ++I+G G
Sbjct: 63 DSIQSAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLG 122
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE--NVRISEVAM 248
+G+ K ++ ++K M ++ NV E +
Sbjct: 123 -------------------------------HHGFRKESLNVFKTMLKQCSNVLFDEFTL 151
Query: 249 VGAISACTQLGDVEM------AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
V + +C LG E+ AAI+ + + NALI + KCG D+++
Sbjct: 152 VSLVGSCASLGAPELLRQVHGAAIIIG------LNSNIIIGNALIDAYGKCGEPDISFSI 205
Query: 303 FSRIKNKDVISYSSMITA-------------------------------FADHGKSQEAL 331
FSR+ +DV+S++SM+ A FA +G+ EAL
Sbjct: 206 FSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEAL 265
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE--HLTCMV 389
+F +MR EGI P+ TF VL+AC+ L+ G + + R I L ++
Sbjct: 266 HLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALI 325
Query: 390 DLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALL 421
D+ + GQ+ A +L M KD +W +L+
Sbjct: 326 DMYCKCGQMRSATTLFKGMHEKDIV---SWNSLI 356
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 217/401 (54%), Gaps = 15/401 (3%)
Query: 94 MHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
M G T SSV++ACA + + E G M RL D M N A
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAERE----GRQVHAHMVKRDRLRDDMVLNN-----A 51
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCW 213
+V YA CG A+ +D M ++ V+ +++AGY K V +A+ VF ++ E + W
Sbjct: 52 LVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAW 111
Query: 214 AAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV-D 272
+ Y QNG + AI ++ ++++++ + ++AC + +++ HV
Sbjct: 112 NVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLK 171
Query: 273 EGC-----CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
EG + +V N+L+ M+ K G +D + F R+ +D +S+++MI +A +G++
Sbjct: 172 EGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRA 231
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++AL +F +M P+ VT IGVL+AC H GLV++G + F MT GI P +H TC
Sbjct: 232 KDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTC 291
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
MVDLLGR+G L++A LI D D+ W +LLGAC++H N ELGE A L EL PE
Sbjct: 292 MVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPEN 351
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+G LL+N+YA MGKW D V+ + + K PGCSWI
Sbjct: 352 SGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWI 392
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 37/237 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ A+ VF Q+ + K W LI + + ++I L+ ++ R + + +T+ +VL
Sbjct: 92 NVEDAQVVFSQMVE-KNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVL 150
Query: 111 NACARVPSLL---------------------------EAVICGYTKIGLMDDAQRLFDSM 143
NAC + L +++ Y K G +DD ++F+ M
Sbjct: 151 NACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 210
Query: 144 AERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAK 199
A R+ +SW+AM+ GYA G K A ++RM +SVT + +++ G G V E +
Sbjct: 211 AARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGR 270
Query: 200 KVFDEISE-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
+ F ++E P + M + G+ K A E+ K M E + +++GA
Sbjct: 271 RHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGA 327
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 253/496 (51%), Gaps = 67/496 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNAC 113
AR+VFD +P T LW +L+ +++ + +M G V T +SVL A
Sbjct: 177 ARKVFDAVPSPDT-VLWNTLLAG----LSGSEALEAFVRMAGAGSVRPDSTTLASVLPAA 231
Query: 114 ARVPSLL-----------------EAVICG----YTKIGLMDDAQRLFDSMAERNVISWS 152
A V + E V+ G Y K G M+ A+ LFD M ++++++
Sbjct: 232 AEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYN 291
Query: 153 AMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMI---------------------A 187
A+++GY+ G + ++ E + + +S T VA+I A
Sbjct: 292 ALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKA 351
Query: 188 G--------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
G Y + ++ A++ FD + E W AM Y QNG + A+ ++
Sbjct: 352 GLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALF 411
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M+ NVR + + + A+SAC QLG + + + K + + YV ALI M+ KC
Sbjct: 412 QQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKC 471
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A F + NK+V+S++ MI+ + HG+ EAL ++ M + + P TF+ VL
Sbjct: 472 GSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVL 531
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY-KDFC 412
ACSHGGLV++G F MT +GI P EH TCMVDLLGR+GQL++A LI ++ K
Sbjct: 532 YACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAV 591
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
G WGALLGAC VH + +L ++A++ L EL PE TG LL+N+Y S ++ ++ +V+
Sbjct: 592 GPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQ 651
Query: 473 MISETEKKKSPGCSWI 488
+ K+PGC+ I
Sbjct: 652 EAKSRKLVKTPGCTLI 667
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 26/182 (14%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+++ AR+ FD +P+ KT W ++I + + ++ L+ +M L V + T SS
Sbjct: 371 NDMDSARRAFDAMPE-KTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSA 429
Query: 110 LNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNV 148
L+ACA++ +L + A+I Y K G + +A+ +FDSM +NV
Sbjct: 430 LSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNV 489
Query: 149 ISWSAMVAGYANCGN----MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
+SW+ M++GY G +K K+ D S T+++++ G V+E VF
Sbjct: 490 VSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRS 549
Query: 205 IS 206
++
Sbjct: 550 MT 551
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
+A+KVFD + PD W + + +A + M +VR + + A
Sbjct: 176 DARKVFDAVPSPDTVLWNTLLAGLSGSEALEAFVRMAGA---GSVRPDSTTLASVLPAAA 232
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
++ + M + ++ + +V LI +++KCG ++ A F R++ D+++Y++
Sbjct: 233 EVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNA 292
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV-----------LTACSHGGLVEDG 365
+I+ ++ +G ++++F ++ G+ P+ T + + L C H +V+ G
Sbjct: 293 LISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAG 352
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 219/411 (53%), Gaps = 39/411 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK----------- 165
P +L +++ Y K GL+ AQR+FD M + + W+A++ Y + G+++
Sbjct: 561 PHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFA 620
Query: 166 -----------------------AAKEFYDRMTEKNSVTWVAMIAG-----YGKCGEVRE 197
A E R E+ V +A Y KCGE+ +
Sbjct: 621 NGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAK 680
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A++VFD++ DA W AM Y NG+ + A++++ M+ E ++ A+ GA+SACT+
Sbjct: 681 AREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTR 740
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
LG +++ + VD + ALI M++KCG AW F +++ KD+I +++M
Sbjct: 741 LGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAM 800
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I G + A + +M G++ N TFIG+L +C+H GL++DG + F MT+++
Sbjct: 801 ILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYH 860
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I P EH CMVDLL R+G L++AH L+ D +A GALLG CK+H N EL E
Sbjct: 861 ISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVL 920
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ L+ L P +GN +L+NIY++ G+W+D+ +++ + +K P CSW+
Sbjct: 921 KQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 971
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 124/310 (40%), Gaps = 73/310 (23%)
Query: 17 KQVHSYLLK--TLTKPHDQYHYYAQFLIRLLQLPGDN--LSYARQVFDQIPKCKTQFLWT 72
+Q+H+ LK + T PH L LL L L A++VFD++P T WT
Sbjct: 546 EQLHARSLKLPSHTNPH--------VLTSLLSLYAKCGLLHRAQRVFDEMPHPST-VPWT 596
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE----------- 121
+LI ++ R+++ + G+ FT VL ACAR+ L
Sbjct: 597 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQE 656
Query: 122 ----------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A + Y K G M A+ +FD M ++ ++W AMV GYA+ G+ + A + +
Sbjct: 657 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 716
Query: 172 DRMTEK---------------------------------------NSVTWVAMIAGYGKC 192
M + N V A+I Y KC
Sbjct: 717 LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKC 776
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G EA VF ++ + D W AM + G+ K A + M + V++++ +G +
Sbjct: 777 GSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLL 836
Query: 253 SACTQLGDVE 262
+CT G ++
Sbjct: 837 CSCTHTGLIQ 846
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 249/472 (52%), Gaps = 21/472 (4%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+H +L KT + Q + L L L +ARQ+FD++P+ + + S+I
Sbjct: 135 QIHGFLRKTGLWSD----LFLQNCLIGLYLKCGCLGFARQMFDRMPQ-RDSVSYNSMING 189
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQ 137
+V + L+ M R + + +++S+++ A+ E V + A
Sbjct: 190 YVKCGLIESARELFDLMPR--EMKNLISWNSMISGYAQTS---EGV----------NIAS 234
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
+LF M E+++ISW++M+ GY G ++ AK +D M ++ VT MI GY K G V +
Sbjct: 235 KLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQ 294
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMVGAISACT 256
AK +FD++ D + +M YVQN A+E++ M +E+ + E +V +SA
Sbjct: 295 AKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIA 354
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
QLG + A + ++ E + ALI M+SKCG + A F I+NK + +++
Sbjct: 355 QLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNA 414
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI A HG + A +M L++ I P+ +TF+GVL ACSH GLV++G FELM R
Sbjct: 415 MIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKH 474
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
I+P +H CMVD+L RSG +E A +LI + + W L AC H E GE+
Sbjct: 475 KIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELV 534
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A+HL+ + LL+N+YAS G WKD V+ M+ E + +K PGCSWI
Sbjct: 535 AKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 586
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 198/430 (46%), Gaps = 92/430 (21%)
Query: 54 YARQVFDQIPKC-------KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
+AR VF + C + FLW ++I++H RQ++LL+ M GV F+
Sbjct: 58 FARCVFHEYHVCSFSPGEMEDPFLWNAVIKSHSHGKDPRQALLLFCLMLENGVSVDKFSL 117
Query: 107 SSVLNACARV--------------------PSLLEAVICG-YTKIGLMDDAQRLFDSMAE 145
S VL AC+R+ L+ + G Y K G + A+++FD M +
Sbjct: 118 SLVLKACSRLGFVKGGMQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQ 177
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTE--KNSVTWVAMIAGYGKCGE-VREAKKVF 202
R+ +S+++M+ GY CG +++A+E +D M KN ++W +MI+GY + E V A K+F
Sbjct: 178 RDSVSYNSMINGYVKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSEGVNIASKLF 237
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
E+ E D W +M YV++G + A ++ VM + +V ++ T
Sbjct: 238 AEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV----------VTCAT------ 281
Query: 263 MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
+I ++K G++ A F ++ +DV++Y+SM+ +
Sbjct: 282 -----------------------MIDGYAKLGFVHQAKTLFDQMPLRDVVAYNSMMAGYV 318
Query: 323 DHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDGC--------KQFELMT 373
+ EAL++F M E + P++ T + +L+A + G + KQF L
Sbjct: 319 QNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMHLYIVEKQFYLGG 378
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
++ G+ ++D+ + G ++ A L+ + + W A++G VH LG
Sbjct: 379 KL-GV--------ALIDMYSKCGSIQHA-MLVFEGIENKSIDHWNAMIGGLAVH---GLG 425
Query: 434 EIAARHLLEL 443
E A LL++
Sbjct: 426 ESAFNMLLQI 435
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 271/537 (50%), Gaps = 68/537 (12%)
Query: 16 LKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTS 73
L Q+H+ L+K+ LT +H L+ L YA +F P+ +
Sbjct: 32 LPQLHAALIKSGELTGSPKCFHS----LLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYN 87
Query: 74 LIRNHVLHA-HFRQSILLYAKMHRLG-VLTSGFTFSSVLNACARVPSL-LEAVICGY-TK 129
++ +LHA H ++ L+ +M + V T + L +C+R+ +L + I Y K
Sbjct: 88 VLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVK 147
Query: 130 IGLMDD-------------------AQRLFDSMAERNVISWSAMVAGYANCGN-MKAAKE 169
GLM D AQ LFD++ E V+ W+A++ Y GN M+ +
Sbjct: 148 RGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEM 207
Query: 170 F---------YDRMTEKNSVT------------WVA-----------------MIAGYGK 191
F +D +T + VT WVA +I Y K
Sbjct: 208 FKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAK 267
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CGE+ +A+++FD + D W+AM Y Q + A+ ++ M+ V ++V MV
Sbjct: 268 CGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSV 327
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+SAC LG +E + ++ T + AL+ ++KCG +D A F + K+
Sbjct: 328 LSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNS 387
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+++++I A +G+ +EAL++F MR IEP VTFIGVL ACSH LVE+G + F+
Sbjct: 388 WTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDS 447
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
MT+ +GIKP EH C+VDLLGR+G +++A+ I +A W ALL +C VH N E
Sbjct: 448 MTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVE 507
Query: 432 LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+GE A + ++ L P +G+ LL+NIYAS+G+WK++ +++ + + +K+PGCS I
Sbjct: 508 IGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLI 564
>gi|15226879|ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana]
gi|209414526|gb|ACI46503.1| At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 242/440 (55%), Gaps = 22/440 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ A ++FD++P+ + W S+++ V +++ L+ +M R V++
Sbjct: 156 IDKALELFDEMPE-RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS---------- 204
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A++ G K G +D+A+RLFD M ERN+ISW+AM+ GYA + A + +
Sbjct: 205 --------WTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF 256
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
M E++ +W MI G+ + E+ +A +FD + E + W M YV+N + A+
Sbjct: 257 QVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALN 316
Query: 232 MY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++ K++R +V+ + V +SAC+ L + + + + + + V++AL++M+
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
Query: 291 SKCGYLDLAWREFSR--IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
SK G L A + F + +D+IS++SMI +A HG +EA++M+ +MR G +P+ VT
Sbjct: 377 SKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVT 436
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
++ +L ACSH GLVE G + F+ + R + EH TC+VDL GR+G+L+ + I
Sbjct: 437 YLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCD 496
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+GA+L AC VH + + + +LE G + G L++NIYA+ GK +++
Sbjct: 497 DARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAA 556
Query: 469 IVKMMISETEKKKSPGCSWI 488
++M + E KK PGCSW+
Sbjct: 557 EMRMKMKEKGLKKQPGCSWV 576
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 190/377 (50%), Gaps = 73/377 (19%)
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
RVP E +I K+G + +A++LFD + ER+V++W+ ++ GY G+M+ A+E +DR+
Sbjct: 45 RVPQP-EWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV 103
Query: 175 -TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ KN VTW AM++GY + ++ A+ +F E+ E + W M Y Q+G A+E++
Sbjct: 104 DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVE-------------------MAAILAKH--VD 272
M + N+ V+ + A Q G ++ M LAK+ VD
Sbjct: 164 DEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVD 219
Query: 273 EG-----CCDRTNYVS-NALIHMHSKCGYLDLA--------------W----------RE 302
E C N +S NA+I +++ +D A W RE
Sbjct: 220 EARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNRE 279
Query: 303 -------FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLT 354
F R+ K+VIS+++MIT + ++ +++EAL++F KM +G ++PN T++ +L+
Sbjct: 280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Query: 355 ACSH-GGLVEDGCKQFELMTRVFGIKPLTEHLT-CMVDLLGRSGQLEKAHSLIMDYKDFC 412
ACS GLVE G + +L+++ + E +T ++++ +SG+L A + D C
Sbjct: 340 ACSDLAGLVE-GQQIHQLISK--SVHQKNEIVTSALLNMYSKSGELIAARKMF-DNGLVC 395
Query: 413 --DAGTWGALLGACKVH 427
D +W +++ H
Sbjct: 396 QRDLISWNSMIAVYAHH 412
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 246/487 (50%), Gaps = 23/487 (4%)
Query: 5 YLVPRSKTFNQLKQVHSYLLK-TLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
+L+ +KT L Q+H++ L+ L + ++ L Q+P YA +F+
Sbjct: 14 HLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIP-----YATTIFNHTH 68
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL-GVLTSGFTFSSVLNACA--RVPSLL 120
L+ S+I+ H F QS + M +L FTF +L A + R L
Sbjct: 69 HPNI-LLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLG 127
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+ + T +G R+ ++ Y+NCG M+ A + +D M + V
Sbjct: 128 QCLHAHVTALGFY------------RHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVV 175
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W MI G+ K G++ K+F + + W M C Q A +++ M ++
Sbjct: 176 VWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQG 235
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVD-EGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ +V + C +LGDV+ + + D +G + V N+L+ + KCG L+ A
Sbjct: 236 FEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAA 295
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
W+ F+ + K+V+S+++MI+ +GK + +++F KM +G+ P+ TF+GVL C+H
Sbjct: 296 WKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHA 355
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
G V+ G + F+ MT F + P EH C+VDLLGR G +++A+ LI + +A WGA
Sbjct: 356 GFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGA 415
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
LL AC+ H + E+ EIAA+ L+ L P +GN LL+N+YA KW + E V++++
Sbjct: 416 LLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGI 475
Query: 480 KKSPGCS 486
KK+PG S
Sbjct: 476 KKNPGQS 482
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 214/387 (55%), Gaps = 12/387 (3%)
Query: 104 FTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
TF+ + ACA SLL + S + +V + +A+V YA G
Sbjct: 11 LTFTFLFPACASFYSLLHGKVI----------HTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+ A++ +D MT ++ TW ++IAGY + G++ A ++F + W M Y QN
Sbjct: 61 LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQN 120
Query: 224 GYAKAAIEMY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
G A+EM+ K+ + + VR +EV + SAC +LG +E+ + + + + YV
Sbjct: 121 GMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYV 180
Query: 283 SNALIHMHSKCGYLDLAWREFSRI-KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
SN L+ M+++CG +D A F+ I K +++ S++SM+ A HG+S EAL ++ +M EG
Sbjct: 181 SNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEG 240
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
IEP+ VTF+G++ AC+HGGLV G + F+ M F I P EH CMVDLLGR+G+L++A
Sbjct: 241 IEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEA 300
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
+ L+ D+ WG LLGAC H N E EIAA L ++ P GN +L NIYAS
Sbjct: 301 YDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASA 360
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
+W ++ ++ + K+ G S I
Sbjct: 361 QRWDGVAKLRKLMKGGQITKAAGYSVI 387
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 94/216 (43%), Gaps = 33/216 (15%)
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+E+ AC + ++ H + D Y AL+ M++K G L LA + F
Sbjct: 9 NELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVF 68
Query: 304 SRIKNKD-------------------------------VISYSSMITAFADHGKSQEALD 332
+ +D V+S+++MI+ ++ +G +AL+
Sbjct: 69 DEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALE 128
Query: 333 MFLKM-RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
MFLKM +++ + PN+VT V +AC+ G +E G ++ E R G+ ++++
Sbjct: 129 MFLKMEKDKEVRPNEVTIASVFSACAKLGALEVG-ERIESYARDNGLMKNLYVSNTLLEM 187
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
R G+++ A + + + +W +++ VH
Sbjct: 188 YARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVH 223
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 219/411 (53%), Gaps = 39/411 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK----------- 165
P +L +++ Y K GL+ AQR+FD M + + W+A++ Y + G+++
Sbjct: 585 PHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFA 644
Query: 166 -----------------------AAKEFYDRMTEKNSVTWVAMIAG-----YGKCGEVRE 197
A E R E+ V +A Y KCGE+ +
Sbjct: 645 NGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAK 704
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A++VFD++ DA W AM Y NG+ + A++++ M+ E ++ A+ GA+SACT+
Sbjct: 705 AREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTR 764
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
LG +++ + VD + ALI M++KCG AW F +++ KD+I +++M
Sbjct: 765 LGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAM 824
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I G + A + +M G++ N TFIG+L +C+H GL++DG + F MT+++
Sbjct: 825 ILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYH 884
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I P EH CMVDLL R+G L++AH L+ D +A GALLG CK+H N EL E
Sbjct: 885 ISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVL 944
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ L+ L P +GN +L+NIY++ G+W+D+ +++ + +K P CSW+
Sbjct: 945 KQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWV 995
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 124/310 (40%), Gaps = 73/310 (23%)
Query: 17 KQVHSYLLK--TLTKPHDQYHYYAQFLIRLLQLPGDN--LSYARQVFDQIPKCKTQFLWT 72
+Q+H+ LK + T PH L LL L L A++VFD++P T WT
Sbjct: 570 EQLHARSLKLPSHTNPH--------VLTSLLSLYAKCGLLHRAQRVFDEMPHPST-VPWT 620
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE----------- 121
+LI ++ R+++ + G+ FT VL ACAR+ L
Sbjct: 621 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQE 680
Query: 122 ----------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A + Y K G M A+ +FD M ++ ++W AMV GYA+ G+ + A + +
Sbjct: 681 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 740
Query: 172 DRMTEK---------------------------------------NSVTWVAMIAGYGKC 192
M + N V A+I Y KC
Sbjct: 741 LAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKC 800
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G EA VF ++ + D W AM + G+ K A + M + V++++ +G +
Sbjct: 801 GSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLL 860
Query: 253 SACTQLGDVE 262
+CT G ++
Sbjct: 861 CSCTHTGLIQ 870
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 239/439 (54%), Gaps = 43/439 (9%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
++L+ A +FD+I K + FLW +IR + + + +I LY +M G++ FTF V
Sbjct: 50 NSLTNAHLLFDRISK-RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFV 108
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L AC+ + ++ E KI + + S E +V +A++ YA CG +++A++
Sbjct: 109 LKACSALSAMEEG-----KKI-----HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQ 158
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D++ E++ V W +M+A Y QNG +
Sbjct: 159 VFDKIDERDVVCWNSMLATYS-------------------------------QNGQPDES 187
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ + +VM ++ +E V +I+A G + L + + + V AL+ M
Sbjct: 188 LALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDM 247
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++K G +++A F ++ K V+S+++MIT +A HG + EALD+F +M+ + + P+ +TF
Sbjct: 248 YAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPDHITF 306
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL ACSHGGL+ +G F M F I P +H TCM+DLLG G+LE+A+ LIM+ +
Sbjct: 307 VGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMR 366
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
DAG WGALL +CK+H N E+GE+A L+EL P+ GN +L+N+YA GKW
Sbjct: 367 VEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVAR 426
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ KKS CSWI
Sbjct: 427 LRDLMMNKGLKKSIACSWI 445
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 123/255 (48%), Gaps = 6/255 (2%)
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
N + ++ Y C + A +FD IS+ + W M Y NG + AI +Y MR
Sbjct: 35 NPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMR 94
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
+ + + AC+ L +E + K V + +V ALI M++KCG ++
Sbjct: 95 DYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVE 154
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A + F +I +DV+ ++SM+ ++ +G+ E+L + M G++P + TF+ + A +
Sbjct: 155 SARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASA 214
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--IMDYKDFCDAG 415
GL+ G K+ + G + + T ++D+ +SG + A SL +++ K
Sbjct: 215 DNGLLPQG-KELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVV--- 270
Query: 416 TWGALLGACKVHVNA 430
+W A++ +H +A
Sbjct: 271 SWNAMITGYAMHGHA 285
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 239/452 (52%), Gaps = 16/452 (3%)
Query: 34 YHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAK 93
Y + LIR+ G+ L YA++VFD++ + W SLI + F++ + L+
Sbjct: 191 YLFIENSLIRMYGYFGE-LGYAQKVFDKMDD-RDLVSWNSLICGYSQCNRFKEVLDLFNL 248
Query: 94 MHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDD-AQRLFDSMAERNVISWS 152
M V T V+ AC+ +C + G++D + + D + +V +
Sbjct: 249 MREANVTADSVTMVKVILACS--------YLC---EDGVVDSMVKYIEDKHVDIDVYLGN 297
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
+++ Y G + A+ +DRM EKN V+W AM+ GY G++ AKK+F+E+ +
Sbjct: 298 SLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVIS 357
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W M Q A+++++ M NV+ E+ + +SAC+ LG ++ + +++
Sbjct: 358 WTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMC 417
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
YV NALI M+ KCG +D A F +K KD +S++SMI A +G +
Sbjct: 418 RHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFE 477
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F +M +G++P +FIG+L AC+H GLV+ G + FE M V+G++P +H C+VDLL
Sbjct: 478 LFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLL 537
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
RSG+L++A+ I D W LL ACK+H N L EIA LLEL P +GN
Sbjct: 538 SRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYV 597
Query: 453 LLANIYASMGKWKDSEIVK--MMISETEKKKS 482
LL+N YA +W D+ ++ M++ + +K S
Sbjct: 598 LLSNTYAGSDRWDDASRMRDLMVVGDVQKPSS 629
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 239/447 (53%), Gaps = 21/447 (4%)
Query: 51 NLSYARQVFDQIPKCKTQ---FLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTF 106
++S A+++FD + + W S+I +V + F ++ ++ M G+ FT
Sbjct: 378 DVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTL 437
Query: 107 SSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
SVL ACA SL + G AQ + + + A+V Y+ C ++ A
Sbjct: 438 GSVLTACADTISLRQ---------GKEIHAQAIVKGLQSDTFVG-GALVEMYSKCQDLTA 487
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASCWAAMTVCYVQ 222
A+ +D + EK+ TW A+I+GY + ++ + + +++ P+ W ++ V+
Sbjct: 488 AQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVE 547
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAI-SACTQLGDVEMAAILAKHVDEGCCDRTNY 281
N ++++ M+ +R ++ VG I AC++L +E H + D +
Sbjct: 548 NRQLDLTMQLFSEMQISKLR-PDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVH 606
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
+ AL+ M++KCG L A + RI N +++S+++M+TA A HG +E + +F M G
Sbjct: 607 IGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALG 666
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
P+ VTF+ VL++C H G VE GC+ F+LM + +KP +H T MVDLL RSGQL +A
Sbjct: 667 FIPDHVTFLSVLSSCVHVGSVETGCEFFDLMG-YYNVKPTLKHYTSMVDLLSRSGQLHEA 725
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
+ LI CD+ WGALLG C H N ELGEIAA L+EL P +GN LLAN++A
Sbjct: 726 YELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYA 785
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
+W D V+ M+ + KSPGCSWI
Sbjct: 786 RRWTDLARVRGMMKDRGMHKSPGCSWI 812
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 175/369 (47%), Gaps = 20/369 (5%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQVH++ +KT D + L+++ G L A +F+ +P + W +++
Sbjct: 79 KQVHAHTIKT---GFDADGFIDTKLLQMYARCG-LLKDADFLFETMPM-RNLHSWKAILS 133
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
++ H F ++ LL+ + GV F F V AC S L +V G GL+
Sbjct: 134 VYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKAC----SGLGSVELGRQLHGLVIKF 189
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
+ N+ +A++ Y CG++ AK+ +M E++SVTW ++I G V
Sbjct: 190 RFCL------NIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVY 243
Query: 197 EAKKVFDEI-----SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
EA + +++ S P+ W+A+ + QNGY + AIEM M+ E + + + G
Sbjct: 244 EALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGV 303
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ AC +L +++ L ++ V NAL+ ++ +CG + A + F + K+V
Sbjct: 304 LPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNV 363
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S ++MI + + G +A ++F M GIE +++ +++ + ++ F+
Sbjct: 364 LSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQN 423
Query: 372 MTRVFGIKP 380
M GI+P
Sbjct: 424 MLMEEGIEP 432
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 235/439 (53%), Gaps = 22/439 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A+++FD++P + W +I + + +++ L +HR G+L S + +S AC+
Sbjct: 371 AKELFDRMP-FRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACS 429
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAER-----NVISWSAMVAGYANCGNMKAAKE 169
+ +L + R S+A + N +A+++ Y C NM+ ++
Sbjct: 430 HIGAL---------------ETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQ 474
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++RM K++V+W + IA + + +A+ +FD + D W + Y Q A
Sbjct: 475 VFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEA 534
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+E +K M E+ + + + +S C LG ++ + + D V+NAL+ M
Sbjct: 535 VEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSM 594
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG D + + F ++ +D+ ++++ IT A HG +EA+ M+ M + G+ PN+VTF
Sbjct: 595 YFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTF 653
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+G+L ACSH GLV++G + F+ M+R +G+ PL EH CMVDLLGR+G ++ A I D
Sbjct: 654 VGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMP 713
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D W ALLGACK+H NAE+G AA L P GN +L+NIY+S+G W +
Sbjct: 714 IEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAE 773
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ + K PGCSW+
Sbjct: 774 LRKIMKQRGVSKEPGCSWM 792
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 177/395 (44%), Gaps = 59/395 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +F Q+P+ + WT +I +V + ++ MH G F+SVL+A
Sbjct: 176 AWNLFKQMPQ-RNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVT 234
Query: 115 RVPSL--LEA-------------VICG------YTK-IGLMDDAQRLFDSMAERNVISWS 152
+ L LE V+ G YT+ +D A + FD M ERN +WS
Sbjct: 235 GLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWS 294
Query: 153 AMVA-------------------------------GYANCGNMKAAKEFYDRMTEKNSVT 181
M+A G A CG + A+ ++++ + V+
Sbjct: 295 TMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVS 354
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W AMI GY + G V EAK++FD + + WA M Y QNG ++ A+++ + + + +
Sbjct: 355 WNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGM 414
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
S ++ + AC+ +G +E + + C +YV NALI M+ KC ++ +
Sbjct: 415 LPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQ 474
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F+R++ KD +S++S I A + ++A +F M + + V++ +++A +
Sbjct: 475 VFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDV----VSWTTIISAYAQAER 530
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
++ + F+ M KP + LT ++ + G G
Sbjct: 531 GDEAVEFFKTMLHEHE-KPNSPILTILLSVCGGLG 564
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 174/373 (46%), Gaps = 30/373 (8%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR+VFD +P + W S+I A+ +L A++ F ++
Sbjct: 49 LREAREVFDAMPH-RDIIAWNSMIS-----AYCNSGMLEDARI----------LFDAISG 92
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
R ++L + GY ++G + DA+R+FD M ERN ++W+AMV+ Y G++ A+ +
Sbjct: 93 GNVRTATIL---LSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLF 149
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D M ++ +W +M+ GY ++ +A +F ++ + + W M YV+ +
Sbjct: 150 DAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWD 209
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++++M E + +SA T L D+ + +L V + + + +++++++
Sbjct: 210 IFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYT 269
Query: 292 K-CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+ LD+A + F + ++ ++S+MI A + G+ A+ ++ + + I P+Q +
Sbjct: 270 RDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALL 328
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
L C G + + FE + P+ M+ ++G +++A L D
Sbjct: 329 TGLARC---GRITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVDEAKELF-DRMP 379
Query: 411 FCDAGTWGALLGA 423
F + +W ++
Sbjct: 380 FRNTISWAGMIAG 392
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 39/229 (17%)
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
++G + +A+ +FD+M R++I+W++M++ Y N G ++ A+ +D ++ N T +++G
Sbjct: 45 RLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSG 104
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y + G V +A++VFD + E + W AM CYVQNG A ++ M +V S +M
Sbjct: 105 YARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDV-TSWNSM 163
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V Q+ D AW F ++
Sbjct: 164 VTGYCHSRQMVD--------------------------------------AWNLFKQMPQ 185
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
+++++++ MI+ + + + D+F M +EG P+Q F VL+A +
Sbjct: 186 RNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVT 234
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 252/493 (51%), Gaps = 61/493 (12%)
Query: 56 RQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR 115
RQVF+++ + W ++I ++ ++ +Y +M R GV+ + T+ +LNAC
Sbjct: 282 RQVFEKLVN-RDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVN 340
Query: 116 VPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
+L A+I Y++ G + DA+ +FD M ++VISW+AM
Sbjct: 341 SAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAM 400
Query: 155 VAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMI---------------------AG- 188
+ G A G A Y M E N VT+ +++ AG
Sbjct: 401 IGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGL 460
Query: 189 -------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKV 235
Y CG V++A++VFD + + D + AM Y + K A++++
Sbjct: 461 ATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDR 520
Query: 236 MRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
+++E ++ +V + ++AC G +E A + V +G V NAL+ ++KCG
Sbjct: 521 LQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGS 580
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
A F ++ ++VIS++++I A HG+ Q+AL +F +M+ EG++P+ VTF+ +L+A
Sbjct: 581 FSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSA 640
Query: 356 CSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
CSH GL+E+G + F M++ F I P EH CMVDLLGR+GQL++A +LI +
Sbjct: 641 CSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTR 700
Query: 416 TWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMIS 475
WGALLGAC++H N + E AA L+L + L+++YA+ G W + ++ ++
Sbjct: 701 IWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLME 760
Query: 476 ETEKKKSPGCSWI 488
+ K PG SWI
Sbjct: 761 QRGVTKEPGRSWI 773
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 207/438 (47%), Gaps = 65/438 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ AR+VFD++ K K+ WT I + + ++ KM + GV+ + T+ SVL
Sbjct: 176 SIEEAREVFDKMEK-KSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVL 234
Query: 111 NACARVPSLLE----------------------AVICGYTKIGLMDDAQRLFDSMAERNV 148
NA + P+ L+ A++ Y K G D +++F+ + R++
Sbjct: 235 NAFSS-PAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDL 293
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWV--------------------- 183
I+W+ M+ G A G + A E Y++M + N +T+V
Sbjct: 294 IAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSR 353
Query: 184 --------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
A+I+ Y +CG +++A+ VFD++ D W AM ++G+ A
Sbjct: 354 VAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEA 413
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ +Y+ M+Q V + V ++AC+ +E + + V E +V N L++M
Sbjct: 414 LTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNM 473
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+S CG + A + F R+ +D+++Y++MI +A H +EAL +F +++ EG++P++VT+
Sbjct: 474 YSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTY 533
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
I +L AC++ G +E ++ + R G T +V + G A S++ +
Sbjct: 534 INMLNACANSGSLE-WAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDA-SIVFEKM 591
Query: 410 DFCDAGTWGALLGACKVH 427
+ +W A++G H
Sbjct: 592 TKRNVISWNAIIGGSAQH 609
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 161/347 (46%), Gaps = 47/347 (13%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMA--ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
+ A+I Y + G +++A++++ ++ ER V SW+AMV GY G ++ A + +M +
Sbjct: 61 VNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQH 120
Query: 178 N-------------------------SVTWVAMIAG--------------YGKCGEVREA 198
+ + AM AG Y KCG + EA
Sbjct: 121 GLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEA 180
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
++VFD++ + W Y G ++ A E+++ M QE V + + + ++A +
Sbjct: 181 REVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
++ + + + V AL+ M++KCG + F ++ N+D+I++++MI
Sbjct: 241 AALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 300
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV--F 376
A+ G +EA +++ +M+ EG+ PN++T++ +L AC + + G E+ +RV
Sbjct: 301 GGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWG---KEIHSRVAKA 357
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G ++ + R G ++ A L+ D D +W A++G
Sbjct: 358 GFTSDIGVQNALISMYSRCGSIKDAR-LVFDKMVRKDVISWTAMIGG 403
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 124/235 (52%), Gaps = 6/235 (2%)
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV----TWVA 184
K G +D Q L A+ N + M+ ++ A ++ + + + +V T A
Sbjct: 4 KDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA 63
Query: 185 MIAGYGKCGEVREAKKVFDEIS--EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
+I Y +CG + EA++V+ ++S E W AM V Y+Q GY + A+++ + M+Q +
Sbjct: 64 LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
++ +S+C G +E + + V+N +++M++KCG ++ A
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREV 183
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
F +++ K V+S++ I +AD G+S+ A ++F KM EG+ PN++T+I VL A S
Sbjct: 184 FDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFS 238
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 37/276 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
ARQVFD++ + + + ++I + H ++++ L+ ++ G+ T+ ++LNACA
Sbjct: 483 ARQVFDRMIQ-RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 541
Query: 115 RVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
SL A++ Y K G DA +F+ M +RNVISW+A
Sbjct: 542 NSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNA 601
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE-- 207
++ G A G + A + ++RM + + VT+V++++ G + E ++ F +S+
Sbjct: 602 IIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDF 661
Query: 208 ---PDASCWAAMTVCYVQNGYAKAAIEMYKVMR-QENVRISEVAMVGAISACTQLGDVEM 263
P + M + G A + K M Q N RI A++G AC G+V +
Sbjct: 662 AIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWG-ALLG---ACRIHGNVPV 717
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
A A+ + D V AL HM++ G D A
Sbjct: 718 AERAAESSLKLDLDNA-VVYVALSHMYAAAGMWDSA 752
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 238/438 (54%), Gaps = 22/438 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++ + K W+++I + H R+++ L+ M G+L T +S+L AC
Sbjct: 313 AREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACI 371
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+L + AQ M + N+I + +V Y+ + A +D M
Sbjct: 372 NCRNLTQV---------RQVHAQASVHGMLQ-NLIVANKLVHFYSYYRALDDAYGLFDGM 421
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAMTVCYVQNGYAKAAI 230
++SV+W M+ G+ K G+ F E+ + PD + C G A ++
Sbjct: 422 CVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNY---TLPFC----GNANESL 474
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++ MR+E V +VAMV + AC +LG + A + ++ + A+I MH
Sbjct: 475 VLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 534
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG ++ A F R++ K+VIS+S+MI A+ HG+ ++ALD+F M GI PN++T +
Sbjct: 535 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLV 594
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
+L ACSH GLVE+G + F LM + ++ +H TC+VDLLGR+G+L++A LI
Sbjct: 595 SLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTV 654
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D G WGA LGAC+ H + L E AA LLEL P+ G+ LL+NIYA+ G+W+D
Sbjct: 655 EKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKT 714
Query: 471 KMMISETEKKKSPGCSWI 488
+ ++S+ KK PG +WI
Sbjct: 715 RDLMSQRRLKKIPGWTWI 732
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 43/326 (13%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN-----------ACA 114
+TQF TSL LH +S +K H L L F S+++N A A
Sbjct: 53 ETQFRQTSL----NLHNREEES----SKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQA 104
Query: 115 RVPSLLEAVICG------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM---- 164
V +LE ++ Y+ +DDA LFD M R+ +SWS MV G+A G+
Sbjct: 105 SVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCF 164
Query: 165 --------------KAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
F R +A++ Y KC E+ +A+ +FD++ E D
Sbjct: 165 GTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDL 224
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W M Y + G A ++ +++ MR+E V +VAMV + AC +LG + A I+ +
Sbjct: 225 VTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDY 284
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ + A+I M++KCG ++ A F R++ K+VIS+S+MI A+ HG+ ++A
Sbjct: 285 IQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 344
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTAC 356
LD+F M + G+ P+++T +L AC
Sbjct: 345 LDLFRMMLSSGMLPDKITLASLLYAC 370
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 214/381 (56%), Gaps = 4/381 (1%)
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
V+N C L ++I G +G ++DA+ +F+ M E N +S++ M+ GYA G M +K
Sbjct: 293 VVNPCLNA---LNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSK 349
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAK 227
+++M + + MI+ Y + GE+ +A ++F+E +E D W +M Y+ +G +
Sbjct: 350 RLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPE 409
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A+++Y M + +++ ++ AC+ LG + +L H+ + + YV +LI
Sbjct: 410 EALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLI 469
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+SKCG + A F I + +V +++++I A HG EA+ +F +M +G+ PN
Sbjct: 470 DMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGA 529
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+GVL+ACS GLV +G K F M R + + P EH C+VDLLGRSG + +A I
Sbjct: 530 TFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKK 589
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
D WGALL AC ++ E+GE A + P+ + +L+NIYA +G+W++
Sbjct: 590 MPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREK 649
Query: 468 EIVKMMISETEKKKSPGCSWI 488
+V+ ++ + KK PGCSWI
Sbjct: 650 MMVRKILRGFKVKKDPGCSWI 670
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 175/396 (44%), Gaps = 66/396 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQ+FDQ+P+ +T W ++I ++ H F +++ L MHR + S TFSSVL+
Sbjct: 48 LDVARQLFDQMPQ-RTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLS 106
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
CAR+ L + A++ Y + +A+R+FD + RN +
Sbjct: 107 VCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVL 166
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
WS M+ GY C M A + +M ++ V W +I+G+ K G+
Sbjct: 167 WSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD---------------- 210
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKV-MRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
G K A+E++++ MR +E + AC +LG + + +
Sbjct: 211 -------------GCGK-ALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHG 256
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
+ + + + AL+ + +C +D A R + N + + +S+I G+ ++
Sbjct: 257 LLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIED 316
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT--RVFGIKPLTEHLTC 387
A +F N E N V++ ++ + GG ++D + FE M +F
Sbjct: 317 AELVF----NGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNT------- 365
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
M+ + R+G+++KA L + K+ D TW +++
Sbjct: 366 MISVYSRNGEIDKALELFEETKNEKDPVTWNSMISG 401
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREA-------KK 200
+IS + ++ YA + A++ +D+M ++ V+W MI+ Y K G EA +
Sbjct: 32 IISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHR 91
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR--QENVRISEVAMVGAISACTQL 258
++SE S + ++VC + V++ E+ + A++ ++C ++
Sbjct: 92 SHMKLSESTFS--SVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 149
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G+ A+ V + R + + ++ + C +D A F ++ +DV++++++I
Sbjct: 150 GE-------ARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLI 202
Query: 319 TAFADHGKS-QEALDMF-LKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ F+ +G +AL++F L MR+ PN+ TF V+ AC G++ G
Sbjct: 203 SGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVG 251
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 216/410 (52%), Gaps = 43/410 (10%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMA----ERNVISWSAMVAGYANCGNMKAAKEFYDRM--- 174
A++ GY G ++A L M E ++I+W+ +V G+ G+ KAA EF+ RM
Sbjct: 434 AMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSM 493
Query: 175 -TEKNSVT-----------------------------------WVAMIAGYGKCGEVREA 198
+ N+ T A+I+ Y C + A
Sbjct: 494 GMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVA 553
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
VF E+S D W ++ Q+G + A+++ + M NV ++ V MV A+ AC++L
Sbjct: 554 CSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL 613
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
+ + + + D N++ N+LI M+ +CG + + R F + +D++S++ MI
Sbjct: 614 AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMI 673
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
+ + HG +A+++F R G++PN +TF +L+ACSH GL+E+G K F++M + +
Sbjct: 674 SVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAM 733
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
P E CMVDLL R+GQ + I +A WG+LLGAC++H N +L E AAR
Sbjct: 734 DPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAAR 793
Query: 439 HLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L EL P+ +GN L+ANIY++ G+W+D+ ++ ++ E K PGCSWI
Sbjct: 794 YLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 843
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 186/372 (50%), Gaps = 51/372 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD++ + + F WT+++ + + ++I L+ M GV F F V AC+
Sbjct: 143 ARRMFDKMSE-RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACS 201
Query: 115 RVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ + + +++ + K G MD A+R F+ + ++V W+
Sbjct: 202 ELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNI 261
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--- 206
MV+GY + G K A + M + + VTW A+I+GY + G+ EA K F E+
Sbjct: 262 MVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLK 321
Query: 207 --EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+P+ W A+ QNGY A+ +++ M E V+ + + + A+SACT L
Sbjct: 322 DFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS----- 376
Query: 265 AILAKHVDE--GCC------DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L +H E G C D V N+L+ ++KC +++A R+F IK D++S+++
Sbjct: 377 --LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNA 434
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV- 375
M+ +A G +EA+++ +M+ +GIEP+ +T+ G++T + G DG E R+
Sbjct: 435 MLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYG---DGKAALEFFQRMH 491
Query: 376 -FGIKPLTEHLT 386
G+ P T ++
Sbjct: 492 SMGMDPNTTTIS 503
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 101/201 (50%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y + G V +A+++FD++SE + W A+ Y G + I+++ +M E VR
Sbjct: 134 YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVF 193
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
AC++L + + + ++ + + V +++ M KCG +D+A R F I+
Sbjct: 194 PKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF 253
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
KDV ++ M++ + G+ ++AL M+ G++P+QVT+ +++ + G E+ K
Sbjct: 254 KDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKY 313
Query: 369 FELMTRVFGIKPLTEHLTCMV 389
F M + KP T ++
Sbjct: 314 FLEMGGLKDFKPNVVSWTALI 334
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 124/309 (40%), Gaps = 72/309 (23%)
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
RLG + ++ C + S L V C + G ++DA+R+FD M+ERNV SW+A++
Sbjct: 106 RLGFQVHAQLVVNGVDVCEFLGSRLLEVYC---QTGCVEDARRMFDKMSERNVFSWTAIM 162
Query: 156 AGYANCG-----------------------------------NMKAAKEFYDRMT----E 176
Y G N + K+ YD M E
Sbjct: 163 EMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFE 222
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
NS +++ + KCG + A++ F+EI D W M Y G K A++ M
Sbjct: 223 GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDM 282
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ V+ +V IS Q G E A S + M
Sbjct: 283 KLSGVKPDQVTWNAIISGYAQSGQFEEA------------------SKYFLEMG------ 318
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
++F +V+S++++I +G EAL +F KM EG++PN +T ++AC
Sbjct: 319 --GLKDF----KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSAC 372
Query: 357 SHGGLVEDG 365
++ L+ G
Sbjct: 373 TNLSLLRHG 381
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
D ++ + L+ ++ + G ++ A R F ++ ++V S+++++ + G +E + +F
Sbjct: 121 DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 180
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M NEG+ P+ F V ACS G ++ M + G + + ++D+ + G
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCG 239
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGA--CKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+++ A + +F D W ++ K L I+ L + P++ +A++
Sbjct: 240 RMDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
+ YA G+++++ + + + K SW +
Sbjct: 299 SG-YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTA 332
>gi|218194384|gb|EEC76811.1| hypothetical protein OsI_14939 [Oryza sativa Indica Group]
Length = 540
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 236/437 (54%), Gaps = 45/437 (10%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD +P + W ++ + ++ +++LL+ M R V+ ++VL+ CA
Sbjct: 123 ARKVFDGMPD-RDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLSTCA 181
Query: 115 RVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
+L I Y L+ DA L D+ A++ YA+C +M+ A++ Y+R
Sbjct: 182 HTRNLRFGKAIHSYM---LVSDA--LIDAQVS------CALMNMYASCADMEMAEKLYNR 230
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
++EK+ V M+ GY K G+V A +F+ + E D W+AM Y ++ A+ ++
Sbjct: 231 VSEKDIVLSTTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSAMIAGYAESSKPMEALNLF 290
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M++ V+ E+ M+ + + NALI M SKC
Sbjct: 291 HDMQRSGVQPDEITMLSILP----------------------------IGNALIDMFSKC 322
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L LA F+ + K+V++++S+ITA A HG + AL +F M++EGI+PN VTF+G+L
Sbjct: 323 GSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLL 382
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC H GLVE+G F++M + + I+P+ EH CMVDLLGR+ L +A LI +
Sbjct: 383 YACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPN 442
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK-- 471
WG+LL AC++H + ELG AA+ +LEL P G LL+NIYA G W D + V+
Sbjct: 443 VVIWGSLLAACRMHGDLELGAFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVKEVRGV 502
Query: 472 MMISETEKKKSPGCSWI 488
M + T KKK GCSW+
Sbjct: 503 MKVQGTWKKK--GCSWM 517
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 137/337 (40%), Gaps = 50/337 (14%)
Query: 80 LHAHF-RQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQR 138
LHAHF R+ H L + S++ A A P L A ++GL +R
Sbjct: 14 LHAHFLRRGHPFPPAAHPDPDLDRAY-ISAIRAATA--PRLALAAFACLRRVGLPAPGRR 70
Query: 139 LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREA 198
S+ ++ AG A+ + E + A++ Y CG V +A
Sbjct: 71 ALPSLLRAIALARFPGTAGAAHGLAFRVGAEV-------DGFVGTALVRAYAACGRVEDA 123
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+KVFD + + D W M CY Q + A+ ++ M++ V +V + +S C
Sbjct: 124 RKVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLSTCAHT 183
Query: 259 -----------------------------------GDVEMAAILAKHVDEGCCDRTNYVS 283
D+EMA L V E + +S
Sbjct: 184 RNLRFGKAIHSYMLVSDALIDAQVSCALMNMYASCADMEMAEKLYNRVSE----KDIVLS 239
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
+++ ++K G +++A F+ + KDV+S+S+MI +A+ K EAL++F M+ G++
Sbjct: 240 TTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVQ 299
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
P+++T + +L + + C L VF P
Sbjct: 300 PDEITMLSILPIGNALIDMFSKCGSLTLALDVFNAMP 336
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/402 (33%), Positives = 212/402 (52%), Gaps = 40/402 (9%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
Y K + A+++FD M RN +SWSAM+ GY MK A E +D+M K+++ +
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVT 314
Query: 187 AG----------------------------------------YGKCGEVREAKKVFDEIS 206
G Y KCG + +A + FD ++
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMN 374
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
D+ ++A+ VQNG A A+ ++++M+ + M+G + AC+ L ++
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
++ + NALI M+SKCG + A F+R+ D++S+++MI + HG
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
EAL +F + G++P+ +TFI +L++CSH GLV +G F+ M+R F I P EH
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
CMVD+LGR+G +++AH I + D W ALL AC++H N ELGE ++ + LGPE
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
TGN LL+NIY++ G+W D+ +++ + KK PGCSWI
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWI 656
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 227/483 (46%), Gaps = 74/483 (15%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
+SK+ + K++H + LK + + + L L + + AR++FD+IP +
Sbjct: 20 QSKSLTEAKKIHQHFLKNTSNADSSVLHK----LTRLYLSCNQVVLARRLFDEIPN-PSV 74
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV----- 123
LW +IR + + F +I LY M LGV + +T+ VL AC+ + ++ + V
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 124 -----------ICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
+C Y K G++ +AQRLF SM+ R+V++W+AM+AG + G A
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194
Query: 168 KEFYDRMTEK----NSVTWVAMIAG----------------------------------- 188
+ +M E+ NS T V ++
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDM 254
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY-KVMRQENVRISEVA 247
Y KC + A+K+FD + + W+AM YV + K A+E++ +++ ++ + + V
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVT 314
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ + AC +L D+ L ++ + + N L+ M++KCG +D A R F +
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMN 374
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG-C 366
KD +S+S++++ +G + AL +F M+ GI+P+ T +GVL ACSH ++ G C
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 367 KQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
L+ R F T+ L C ++D+ + G++ A + + D D +W A++
Sbjct: 435 SHGYLIVRGFA----TDTLICNALIDMYSKCGKISFARE-VFNRMDRHDIVSWNAMIIGY 489
Query: 425 KVH 427
+H
Sbjct: 490 GIH 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 10/217 (4%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ AC Q + A + +H + + + V + L ++ C + LA R F I N V
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
I ++ +I A+A +G A+D++ M + G+ PN+ T+ VL ACS +EDG +
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV-EIHS 133
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVN 429
++FG++ T +VD + G L +A L M ++D W A++ C ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVV---AWNAMIAGCSLY-- 188
Query: 430 AELGEIAARHLLELGPEKT-GNSALLANIYASMGKWK 465
L + A + ++++ E NS+ + + ++G+ K
Sbjct: 189 -GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAK 224
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 160/500 (32%), Positives = 261/500 (52%), Gaps = 65/500 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ AR+VFD + + +T W ++I + + +++++++ M G+ T SVL
Sbjct: 174 MEVARRVFDLMRE-RTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLP 232
Query: 112 ACA---------RVPSLLEAVICG------------YTKIGLMDDAQRLFDSMAERNVIS 150
C+ RV +L+E G Y K G MD+AQ +F M +R+V+S
Sbjct: 233 VCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVS 292
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVT----------------------W-- 182
W+ M+ GY G+ ++A M + N VT W
Sbjct: 293 WTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAI 352
Query: 183 -----------VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
A+I Y KC V + +VF + S+ + W A+ + NG ++ AIE
Sbjct: 353 RQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIE 412
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH-VDEGCCDRTNYVSNALIHMH 290
++K M E V ++ + + A L D++ A + + + G R V+ LI ++
Sbjct: 413 LFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIE-VATILIDIY 471
Query: 291 SKCGYLDLAWREFSRI--KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
SKCG L+ A F+ I K+KD+I++S++I + HG + A+ +F +M G++PN++T
Sbjct: 472 SKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEIT 531
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F +L ACSH GLV++G F+ M + T+H TC++DLLGR+G+LE+A+ LI
Sbjct: 532 FTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTM 591
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+ WGALLG+C +H N ELGE+AA+ L EL P TGN LLANIY+++G+W+D+E
Sbjct: 592 AFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAE 651
Query: 469 IVKMMISETEKKKSPGCSWI 488
V++M++ +K+P S I
Sbjct: 652 HVRLMMNNIGLRKTPAHSLI 671
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 164/363 (45%), Gaps = 62/363 (17%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQ 61
TS+ +P +K H+ L L+ P+ H+ L + G +AR++FD+
Sbjct: 29 TSRKSIPNTKQI----HAHTITLGLLSSPYS--HHLLSSLAAAYAMFG-CAPHARKLFDE 81
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSVLNACAR--VPS 118
+ + + F W ++IR + ++ L+ +M G +T+ V+ AC +P
Sbjct: 82 L-RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
+ A+I T + D D+ + ++++A Y NCG M+ A+ +D M E+
Sbjct: 141 M-GALIHARTVMSGFDS-----DAFVQ------NSLMAMYMNCGEMEVARRVFDLMRERT 188
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
V+W MI GY K G V+EA VFD + EPD +
Sbjct: 189 LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCA----------------------- 225
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
+V + C+ L ++E+ + V+ V N+L+ M++KCG
Sbjct: 226 ------------TVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCG 273
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+D A F + +DV+S+++M+ + +G ++ AL + M+ E ++PN VT VL+
Sbjct: 274 NMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLS 333
Query: 355 ACS 357
AC+
Sbjct: 334 ACA 336
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 16/236 (6%)
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
++ A Y G A+K+FDE+ P W AM Y +G + A+ ++ M R
Sbjct: 61 SLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRW 120
Query: 244 SE-VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+ I AC EM A++ D +V N+L+ M+ CG +++A R
Sbjct: 121 PDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRV 180
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F ++ + ++S+++MI + +G +EAL +F M +GIEP+ T + VL CS+
Sbjct: 181 FDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSY---- 236
Query: 363 EDGCKQFELMTRVFG---IKPLTEHLTC---MVDLLGRSGQLEKAHSLI--MDYKD 410
K+ E+ RV +K L E ++ ++D+ + G +++A + MD +D
Sbjct: 237 ---LKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRD 289
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 32/189 (16%)
Query: 13 FNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
Q + +H YL+++ L++ A LI + G +L A +F+ IPK +
Sbjct: 442 LQQARNMHGYLIRSGFLSRIE-----VATILIDIYSKCG-SLESAHNIFNGIPKKDKDII 495
Query: 71 -WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
W+++I + +H H +I L+ +M + GV + TF+S+L+AC+
Sbjct: 496 TWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHA------------- 542
Query: 130 IGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKEFYDRMT-EKNSVTWV 183
GL+D+ LF M E N +S ++ ++ G ++ A E M N W
Sbjct: 543 -GLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWG 601
Query: 184 AMIAGYGKC 192
A++ G C
Sbjct: 602 ALL---GSC 607
>gi|302791537|ref|XP_002977535.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
gi|300154905|gb|EFJ21539.1| hypothetical protein SELMODRAFT_106750 [Selaginella moellendorffii]
Length = 545
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 252/461 (54%), Gaps = 39/461 (8%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSIL-LYAKMHRLGVLTSGFTFSSVL 110
L A ++F +P+ W +I + H R+ L L+ +MH G+ + TF ++L
Sbjct: 61 LESACEIFHGVPR-NDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAIL 119
Query: 111 NACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERN-- 147
+A + L E A+I Y+K G ++DA++ F M E+N
Sbjct: 120 SAVSGARGLEEGRKIHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKP 179
Query: 148 -VISWSAMVAGYANCGNMKAAKEFYDRMTEKN-----SVTWV--AMIAGYGKCGEVREAK 199
++ W+AM+A YA G+ K A E + +M ++ S+ + A++ YGKCG V +A+
Sbjct: 180 DLVLWTAMIAAYAGHGDYKEAFELFQQMQDQGLKPDKSLVSIGNAIVHMYGKCGNVADAR 239
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
K+FD++ E D W M Y ++GY + A++++KVM E+V +V ++ + AC+ +
Sbjct: 240 KMFDKMKERDTVSWTTMIAVYAEHGYDREALQIFKVMLLESVAPDKVTLINVLDACSNVS 299
Query: 260 DVEMAAILAKH-VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
+ ++ K V+ G + + NA+ M CG L A F + +DV+S++ +I
Sbjct: 300 GLAQGRLVYKQFVESGAHELDLVLGNAVARMFGSCGSLREAREIFESLAARDVVSWNCLI 359
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
TA+A HG +E+L +F +M E ++P++VTF+GVL+ACSHGGLV DGC+ F M + + I
Sbjct: 360 TAYAQHGSFEESLRLFRRMLEECVKPDEVTFVGVLSACSHGGLVADGCQFFVSMVQDYQI 419
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT---WGALLGACKVHVNAELGEI 435
H CMVDLLGR+G+L +A L+ C A W +LL +CK+H + + G+
Sbjct: 420 PAEEIHYGCMVDLLGRAGRLAEAEELLSRLP--CAATNDVMWTSLLSSCKLHSDLDRGKR 477
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
AA+ LL + P + LA I+A+ G+WK++ ++ + E
Sbjct: 478 AAKKLLAMVPGDPSHLLALATIHAASGEWKEAMRIRKEVME 518
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 125/235 (53%), Gaps = 16/235 (6%)
Query: 153 AMVAGYANCGN---MKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEI 205
A++A C + + A + R+TE + V A++ YGKCG + A ++F +
Sbjct: 12 ALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGALESACEIFHGV 71
Query: 206 SEPDASCWAAMTVCYVQNGYAK-AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
DA W M Y Q+G+++ A+E+++ M E + ++V + +SA + +E
Sbjct: 72 PRNDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILSAVSGARGLEEG 131
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI--KNK-DVISYSSMITAF 321
+ V E V NALI M+SKCG L+ A + F+ + KNK D++ +++MI A+
Sbjct: 132 RKIHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKNKPDLVLWTAMIAAY 191
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG----GLVEDGCKQFELM 372
A HG +EA ++F +M+++G++P++ + + + A H G V D K F+ M
Sbjct: 192 AGHGDYKEAFELFQQMQDQGLKPDK-SLVSIGNAIVHMYGKCGNVADARKMFDKM 245
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 236 MRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
M+ + V VA++ A+ AC + + + E +SNAL++M+ KCG
Sbjct: 1 MQLQGVAPDRVALIAALGACQDPSRLAAGVGIHSRITEAGLQGDIVISNALVNMYGKCGA 60
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKS-QEALDMFLKMRNEGIEPNQVTFIGVLT 354
L+ A F + D IS++ MI+ +A G S +EAL++F +M EG+ PN+VTF+ +L+
Sbjct: 61 LESACEIFHGVPRNDAISWNGMISLYAQDGHSREEALELFRRMHGEGLTPNKVTFLAILS 120
Query: 355 ACSHGGLVEDGCKQFELMTRVF--GIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKD 410
A S +E+G K + T+V G ++D+ + G LE A MD K+
Sbjct: 121 AVSGARGLEEGRK---IHTQVVESGYSGELSVGNALIDMYSKCGSLEDARKTFAGMDEKN 177
Query: 411 FCDAGTWGALLGACKVH 427
D W A++ A H
Sbjct: 178 KPDLVLWTAMIAAYAGH 194
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 232/474 (48%), Gaps = 59/474 (12%)
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC---------ARV------ 116
T + NH ++ + M R GV T+S ++ C RV
Sbjct: 254 TESLLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFS 313
Query: 117 ----PS--LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC--------- 161
P L +I Y K L+++AQ LFD M ERNV+SW+ M++ Y+N
Sbjct: 314 NGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRL 373
Query: 162 ----------GNM-------KAAKEFYDRMT----------EKNSVTWVAMIAGYGKCGE 194
NM +A + YD E + A+I Y K GE
Sbjct: 374 LAFMFRDGVMPNMFTFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGE 433
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+ EA KVF E+ D+ W ++ + Q+ A+ +YK MR+ + + + A
Sbjct: 434 LLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRA 493
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
CT L +E+ HV + D+ ++NAL+ M+ KCG L+ A F+R+ KDVIS+
Sbjct: 494 CTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISW 551
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
S+MI A +G S EAL++F M+ +G +PN +T +GVL ACSH GLV +G F M
Sbjct: 552 STMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNN 611
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
++GI P EH CM+DLLGR+ +L+ LI + D TW LL AC+ N +L
Sbjct: 612 LYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLAT 671
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA+ +L+L P+ TG LL+NIYA +W D V+ + + +K PGCSWI
Sbjct: 672 YAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWI 725
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 38/285 (13%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
LKQ+HS+++K + + LI + G+ L A +VF ++ +W S+I
Sbjct: 402 LKQLHSWIMKVGLESDV---FVRSALIDVYSKMGELLE-ALKVFREM-MTGDSVVWNSII 456
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------------- 121
H+ +++ LY M R+G T +SVL AC + SLLE
Sbjct: 457 AAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSL-SLLELGRQAHVHVLKFDQ 515
Query: 122 ------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM- 174
A++ Y K G ++DA+ +F+ MA+++VISWS M+AG A G A ++ M
Sbjct: 516 DLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMK 575
Query: 175 ---TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-----EPDASCWAAMTVCYVQNGYA 226
+ N +T + ++ G V E F ++ +P + M G A
Sbjct: 576 VQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLL---GRA 632
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
+ +M K++ + N V + AC +V++A AK +
Sbjct: 633 EKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEI 677
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 239/497 (48%), Gaps = 58/497 (11%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ L A Q+ QI K ++++LI++ + +Q ++ + G + F + +
Sbjct: 53 NRLKEALQILHQIDKPSAS-VYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRL 111
Query: 110 LNACARVPSLLEA-----------------VICGYTKIGLMDDAQRLFDSMAERNVISWS 152
L A+ SL+++ +I GY K+GL+ +A+ LFD M ER+ SW+
Sbjct: 112 LEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWT 171
Query: 153 AMVAGYANCGNMKAAKEFYDRMT------------------------------------- 175
AM++GY A E + M
Sbjct: 172 AMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMR 231
Query: 176 ---EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+ + V W A+ YGKCG + EA+ +FD++ + D W AM Y Q+G K ++
Sbjct: 232 TGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDL 291
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ + + +R +E G ++AC E+ + ++ D ++ ++AL+HM+SK
Sbjct: 292 FADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSK 351
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG + A R F D+ S++S+I +A +G+ EA+ F + G +P+ +TF+GV
Sbjct: 352 CGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGV 411
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+AC+H GLV+ G F + +G+ +H C++DLL RSGQ ++A ++I
Sbjct: 412 LSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKP 471
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
D W +LLG C++H N +L + AA L E+ PE LANIYA+ G W + ++
Sbjct: 472 DKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRK 531
Query: 473 MISETEKKKSPGCSWIS 489
+ + K PG SWI+
Sbjct: 532 TMDDRGVVKKPGLSWIA 548
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 231/466 (49%), Gaps = 62/466 (13%)
Query: 85 RQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---------------------LLEAV 123
R ++ L+ +M R + +T +L A AR P + ++
Sbjct: 98 RTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSAHALLCRLGLQAHDHTVHSL 157
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG-NMKAAKEFYDRMTE----KN 178
+ Y+ +G A+R+FD + R+V+SW+AM+ Y G A+ F D + E N
Sbjct: 158 VTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPN 217
Query: 179 SVT----------------------WV-------------AMIAGYGKCGEVREAKKVFD 203
VT WV A++ Y KCGE+ EA++VFD
Sbjct: 218 EVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFD 277
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
I+ D W AM Y QNG +K AI ++ MRQE ++ +VG +SAC +G +E+
Sbjct: 278 GIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALEL 337
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
L + YV AL+ M+SKCG LD A + F ++ K+ +++++I A
Sbjct: 338 GTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAF 397
Query: 324 HGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
+G+ EA+ F MRNE G+ P+ +TFIGVL+AC H GL++DG + F +T F I P
Sbjct: 398 NGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKI 457
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
EH +CMVDLL R+G LE+A + DA GALL AC+ N E+ E +++
Sbjct: 458 EHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALLAACRKCKNVEVSERVINRIMQ 517
Query: 443 LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L P + N + + IYAS + DS ++ ++ E K PGCSW+
Sbjct: 518 LEPSNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVSKIPGCSWV 563
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 242/461 (52%), Gaps = 28/461 (6%)
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA 112
S AR +FD+ + K + +IR++V + + +++ ++ M +TF VL A
Sbjct: 88 SVARYIFDRSLE-KNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKA 146
Query: 113 CARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISW 151
C+ + +L A++ Y K G + +A+++ D M R+V+SW
Sbjct: 147 CSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSW 206
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKN------SVTWVAMIAGYGKCGEVREAKKVFDEI 205
++MVAGYA G A E M N ++ ++ + Y V+ +F+ +
Sbjct: 207 NSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERM 266
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
++ + W M YV N A+ ++ M + ++ V + + AC L + +
Sbjct: 267 TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGR 326
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
L K++++G + NAL+ M++KCG L+ A F +++ +DV+S++SM++A+ G
Sbjct: 327 RLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSG 386
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+ +A+ +F KM + G P+ + F+ VL+ACSH GL++ G F +MT +GI P EH
Sbjct: 387 QGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF 446
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
CMVDL GR+G++E+A+S I + WGALL AC+VH ++G +AA L +L P
Sbjct: 447 ACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAP 506
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
+++G LL+NIYA G WKD V+ + + KK PG S
Sbjct: 507 KQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 145/355 (40%), Gaps = 75/355 (21%)
Query: 109 VLNACARV-PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN------- 160
V+N R+ P+L ++ Y+ G A+ +FD E+NV+ ++ M+ Y N
Sbjct: 62 VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEA 121
Query: 161 ---------CG-------------------NMKAAKEFYDRMT----EKNSVTWVAMIAG 188
C N++ + +D + + N A++A
Sbjct: 122 LSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAM 181
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
YGKCG +REA+KV D++ D W +M Y Q+G A+E+ K M N+
Sbjct: 182 YGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN------ 235
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
D A L+ V + Y+ N F R+
Sbjct: 236 ----------HDAGTMASLSPVVCYTSLENVQYIHNM-----------------FERMTK 268
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
K++IS++ MI + ++ EA+ +FL+M G++P+ VT +L AC + G +
Sbjct: 269 KNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRL 328
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ + + ++P ++D+ + G LE+A + D D +W +++ A
Sbjct: 329 HKYIEK-GNLQPNLLLENALLDMYAKCGCLEEARD-VFDKMRLRDVVSWTSMMSA 381
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 217/404 (53%), Gaps = 39/404 (9%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC-GNMKAAKEFYDRMTEK--- 177
+++ Y K G++DDA LF M +RNV+SW+ +VA AN G K A F M
Sbjct: 112 SLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVA 171
Query: 178 -NSVTWVA--------------------------------MIAGYGKCGEVREAKKVFDE 204
NS T+ + +I Y K G++ + VFDE
Sbjct: 172 ANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDE 231
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ D W ++ + Q+G A+E++ M++ ++ + + ACT + +E+
Sbjct: 232 MVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVG 291
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ HV + DR + NAL+ M+ KCG L A FSR+ ++DVIS+S+MI+ A +
Sbjct: 292 RQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQN 349
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
G+S EAL +F M+ EG PN +T +GVL ACSH GLVEDG F M ++FGI+P EH
Sbjct: 350 GRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREH 409
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
CMVDLLGR+G+L++A I + K D+ W LLGAC++H NA L AA +L+L
Sbjct: 410 CNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLE 469
Query: 445 PEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
PE G LL+NIYA + +W ++E + + KK PG SWI
Sbjct: 470 PEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWI 513
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 143/329 (43%), Gaps = 63/329 (19%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHV-LHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
L A ++F +P+ + WT+++ ++++ +M R GV + +TFSSVL
Sbjct: 123 LDDALELFGGMPQ-RNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVL 181
Query: 111 NACARVPSLLEA-------------------VICGYTKIGLMDDAQRLFDSMAERNVISW 151
AC P +L A +I Y K+G +D + +FD M +++ W
Sbjct: 182 GACG-TPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVW 240
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTE------KNSVTWV---------------------- 183
++++AG+A G+ A E + RM E + ++T V
Sbjct: 241 NSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK 300
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
A++ Y KCG + +A +F + + D W+ M QNG + A++++
Sbjct: 301 YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFD 360
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE--GCCDRTNYVSNALIHMHSK 292
+M+ E + + MVG + AC+ G VE + +D+ G + N ++ + +
Sbjct: 361 LMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHC-NCMVDLLGR 419
Query: 293 CGYLDLAWREFSRIK-NKDVISYSSMITA 320
G LD A + +K D + + +++ A
Sbjct: 420 AGKLDEAMKFIGEMKFEPDSVIWRTLLGA 448
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD------EGCC 276
+G AA+ + + VR V++ I C + G V + +HV G
Sbjct: 44 DGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGAT 103
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD-HGKSQEALDMFL 335
+ +VSN+L+ M++K G LD A F + ++V+S+++++ A A+ G+ +EAL +
Sbjct: 104 HGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLV 163
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLV---EDGCKQFELMTRVF---------------- 376
+MR +G+ N TF VL AC G++ + L + VF
Sbjct: 164 EMRRDGVAANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLD 223
Query: 377 -GIKPLTEHLTC-------MVDLLGRSGQLEKAHSLIMDYKD---FCDAGTWGALLGACK 425
G E +TC ++ +SG A L M K+ + GT ++L AC
Sbjct: 224 SGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACT 283
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
V E+G H+L+ + ++ALL ++Y G D++
Sbjct: 284 GMVMLEVGRQVHAHVLKYDRDLILHNALL-DMYCKCGCLLDAD 325
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 24/175 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L R VFD++ C +W S+I ++ L+ +M G L + T +SVL
Sbjct: 221 DLDSGRGVFDEMVTCDL-VVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVL 279
Query: 111 NACA-------------------RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISW 151
AC R L A++ Y K G + DA LF M +R+VISW
Sbjct: 280 RACTGMVMLEVGRQVHAHVLKYDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISW 339
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVF 202
S M++G A G A + +D M + N++T V ++ G V + F
Sbjct: 340 STMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYF 394
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 157/540 (29%), Positives = 261/540 (48%), Gaps = 67/540 (12%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S ++ K +H +L++ K + + A L+ + + G ++ A+ VF+ + +
Sbjct: 499 SSAYSDGKMIHEDILRSGIKSNG---HLANALMNMYRRCG-SIMEAQNVFEGT-RARDII 553
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------- 121
W S+I H H + + L+ +M + G+ TF+SVL C + P LE
Sbjct: 554 SWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGC-KNPEALELGRQIHML 612
Query: 122 --------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
A+I Y + G + DA +F S+ RNV+SW+AM+ G+A+ G + A
Sbjct: 613 IIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKA 672
Query: 168 KEFYDRMT---------------------------------------EKNSVTWVAMIAG 188
E + +M E ++ A+I+
Sbjct: 673 FELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISA 732
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y K G + +A+KVFD++ D W M Y QNG A++ M+++ V +++ +
Sbjct: 733 YSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSF 792
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V ++AC+ +E + + + V ALI M++KCG L+ A F
Sbjct: 793 VSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTE 852
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
K+V+++++MI A+A HG + +ALD F M EGI+P+ TF +L+AC+H GLV +G +
Sbjct: 853 KNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRI 912
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F + G+ P EH C+V LLGR+G+ ++A +LI DA W LLGAC++H
Sbjct: 913 FSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHG 972
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N L E AA + L+L LL+N+YA+ G+W D ++ ++ +K PG SWI
Sbjct: 973 NVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWI 1032
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 170/358 (47%), Gaps = 60/358 (16%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL--------- 120
++ +LI H H+ ++ Y +M GV+ + T+ SVLNAC+ +L
Sbjct: 352 VYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHI 411
Query: 121 ------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
++I Y + G + A+ LF++M +R++ISW+A++AGYA + A
Sbjct: 412 SEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAM 471
Query: 169 EFYDRM----TEKNSVTWVAMIAG-----------------------------------Y 189
+ Y +M + VT++ +++ Y
Sbjct: 472 KLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMY 531
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
+CG + EA+ VF+ D W +M + Q+G +AA +++ M++E + ++
Sbjct: 532 RRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFA 591
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+ C +E+ + + E + NALI+M+ +CG L A+ F ++++
Sbjct: 592 SVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR 651
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+V+S+++MI FAD G+ ++A ++F +M+N+G +P + TF +L AC +++G K
Sbjct: 652 NVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKK 709
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 215/470 (45%), Gaps = 73/470 (15%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--DNLSYARQVFDQIPKCKTQFLWTSL 74
K++HS +++ Y + LL + G ++L ARQVF I + + + ++
Sbjct: 203 KKIHSKIIEA------GYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYR-RDVVSYNTM 255
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE------------- 121
+ + A+ + I L+ +M G+ T+ ++L+A PS+L+
Sbjct: 256 LGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFT-TPSMLDEGKRIHKLAVNEG 314
Query: 122 ---------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
A+ + + G + A++ ++ A+R+V+ ++A++A A G+ + A E Y
Sbjct: 315 LNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYY 374
Query: 173 RMTEK----NSVTWVA-----------------------------------MIAGYGKCG 193
+M N T+++ +I+ Y +CG
Sbjct: 375 QMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCG 434
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
++ A+++F+ + + D W A+ Y + A+++YK M+ E V+ V + +S
Sbjct: 435 DLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLS 494
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
ACT ++ + + +++NAL++M+ +CG + A F + +D+IS
Sbjct: 495 ACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIIS 554
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++SMI A HG + A +FL+M+ EG+EP+++TF VL C + +E G +Q ++
Sbjct: 555 WNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELG-RQIHMLI 613
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G++ ++++ R G L+ A+ + + + +W A++G
Sbjct: 614 IESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR-NVMSWTAMIGG 662
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/483 (20%), Positives = 218/483 (45%), Gaps = 67/483 (13%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R ++ + K++H+ +++ P + + LI + + ++S A QVF ++P+ +
Sbjct: 94 RKRSLAEAKRIHAQMVEAGVGPDI---FLSNLLINMY-VKCRSVSDAHQVFLKMPR-RDV 148
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC--------------- 113
W SLI + +++ L+ +M G + S T+ S+L AC
Sbjct: 149 ISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSK 208
Query: 114 ------ARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
R P + +++ Y K + A+++F + R+V+S++ M+ YA ++
Sbjct: 209 IIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEEC 268
Query: 168 KEFYDRMTEK----NSVTWVAMIAGYG--------------------------------- 190
+ +M+ + + VT++ ++ +
Sbjct: 269 IGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATM 328
Query: 191 --KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
+CG+V AK+ + ++ D + A+ Q+G+ + A E Y MR + V ++
Sbjct: 329 FVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTY 388
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+ ++AC+ + ++ H+ E + N+LI M+++CG L A F+ +
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPK 448
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+D+IS++++I +A EA+ ++ +M++EG++P +VTF+ +L+AC++ DG
Sbjct: 449 RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMI 508
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
E + R GIK ++++ R G + +A ++ + D +W +++ H
Sbjct: 509 HEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHG 566
Query: 429 NAE 431
+ E
Sbjct: 567 SYE 569
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 167/403 (41%), Gaps = 61/403 (15%)
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA 122
P + + L++N ++ ++A+M GV F + ++N
Sbjct: 77 PTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINM---------- 126
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KN 178
Y K + DA ++F M R+VISW+++++ YA G K A + ++ M +
Sbjct: 127 ----YVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPS 182
Query: 179 SVTWVAMIAG-----------------------------------YGKCGEVREAKKVFD 203
+T+++++ YGKC ++ A++VF
Sbjct: 183 KITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFS 242
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
I D + M Y Q Y + I ++ M E + +V + + A T ++
Sbjct: 243 GIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE 302
Query: 264 AAILAK-HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFA 322
+ K V+EG V AL M +CG + A + ++DV+ Y+++I A A
Sbjct: 303 GKRIHKLAVNEGLNSDIR-VGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALA 361
Query: 323 DHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
HG +EA + + +MR++G+ N+ T++ VL ACS + G ++ V G
Sbjct: 362 QHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEV-GHSSDV 420
Query: 383 EHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGA 423
+ ++ + R G L +A L M +D +W A++
Sbjct: 421 QIGNSLISMYARCGDLPRARELFNTMPKRDLI---SWNAIIAG 460
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 224 GYAKAAIEMYKVMRQENVRISE-----------------VAMVGAISACTQLGDVEMAAI 266
G A + + KVMR E R SE A V + CT+ + A
Sbjct: 44 GGASSNLVSVKVMRDEQHRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKR 103
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ + E ++SN LI+M+ KC + A + F ++ +DVIS++S+I+ +A G
Sbjct: 104 IHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGF 163
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
++A +F +M+ G P+++T+I +LTAC +E G K
Sbjct: 164 KKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKK 204
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 160/500 (32%), Positives = 261/500 (52%), Gaps = 65/500 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ AR+VFD + + +T W ++I + + +++++++ M G+ T SVL
Sbjct: 174 MEVARRVFDLMRE-RTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLP 232
Query: 112 ACA---------RVPSLLEAVICG------------YTKIGLMDDAQRLFDSMAERNVIS 150
C+ RV +L+E G Y K G MD+AQ +F M +R+V+S
Sbjct: 233 VCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVS 292
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVT----------------------W-- 182
W+ M+ GY G+ ++A M + N VT W
Sbjct: 293 WTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAI 352
Query: 183 -----------VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
A+I Y KC V + +VF + S+ + W A+ + NG ++ AIE
Sbjct: 353 RQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIE 412
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH-VDEGCCDRTNYVSNALIHMH 290
++K M E V ++ + + A L D++ A + + + G R V+ LI ++
Sbjct: 413 LFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIE-VATILIDIY 471
Query: 291 SKCGYLDLAWREFSRI--KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
SKCG L+ A F+ I K+KD+I++S++I + HG + A+ +F +M G++PN++T
Sbjct: 472 SKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEIT 531
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F +L ACSH GLV++G F+ M + T+H TC++DLLGR+G+LE+A+ LI
Sbjct: 532 FTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTM 591
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+ WGALLG+C +H N ELGE+AA+ L EL P TGN LLANIY+++G+W+D+E
Sbjct: 592 AFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAE 651
Query: 469 IVKMMISETEKKKSPGCSWI 488
V++M++ +K+P S I
Sbjct: 652 HVRLMMNNIGLRKTPAHSLI 671
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 164/363 (45%), Gaps = 62/363 (17%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQ 61
TS+ +P +K H+ L L+ P+ H+ L + G +AR++FD+
Sbjct: 29 TSRKSIPNTKQI----HAHTITLGLLSSPYS--HHLLSSLAAAYAMCG-CAPHARKLFDE 81
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSVLNACAR--VPS 118
+ + + F W ++IR + ++ L+ +M G +T+ V+ AC +P
Sbjct: 82 L-RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
+ A+I T + D D+ + ++++A Y NCG M+ A+ +D M E+
Sbjct: 141 M-GALIHARTVMSGFDS-----DAFVQ------NSLMAMYMNCGEMEVARRVFDLMRERT 188
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEI----SEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
V+W MI GY K G V+EA VFD + EPD +
Sbjct: 189 LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCA----------------------- 225
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
+V + C+ L ++E+ + V+ V N+L+ M++KCG
Sbjct: 226 ------------TVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCG 273
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+D A F + +DV+S+++M+ + +G ++ AL + M+ E ++PN VT VL+
Sbjct: 274 NMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLS 333
Query: 355 ACS 357
AC+
Sbjct: 334 ACA 336
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 16/236 (6%)
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
++ A Y CG A+K+FDE+ P W AM Y +G + A+ ++ M R
Sbjct: 61 SLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRW 120
Query: 244 SE-VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+ I AC EM A++ D +V N+L+ M+ CG +++A R
Sbjct: 121 PDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRV 180
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F ++ + ++S+++MI + +G +EAL +F M +GIEP+ T + VL CS+
Sbjct: 181 FDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSY---- 236
Query: 363 EDGCKQFELMTRVFG---IKPLTEHLTC---MVDLLGRSGQLEKAHSLI--MDYKD 410
K+ E+ RV +K L E ++ ++D+ + G +++A + MD +D
Sbjct: 237 ---LKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRD 289
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 32/189 (16%)
Query: 13 FNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
Q + +H YL+++ L++ A LI + G +L A +F+ IPK +
Sbjct: 442 LQQARNMHGYLIRSGFLSRIE-----VATILIDIYSKCG-SLESAHNIFNGIPKKDKDII 495
Query: 71 -WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
W+++I + +H H +I L+ +M + GV + TF+S+L+AC+
Sbjct: 496 TWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHA------------- 542
Query: 130 IGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKEFYDRMT-EKNSVTWV 183
GL+D+ LF M E N +S ++ ++ G ++ A E M N W
Sbjct: 543 -GLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWG 601
Query: 184 AMIAGYGKC 192
A++ G C
Sbjct: 602 ALL---GSC 607
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 234/441 (53%), Gaps = 21/441 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++FD++ + K W++LI + + ++I + MH++GV+ S L+ACA
Sbjct: 329 ACKLFDEMLE-KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACA 387
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKAAKE 169
+ L+ + +L S++ E + +A++ Y+ CG++ A++
Sbjct: 388 NL---------------LVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 432
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D + ++W +MI+GY KC V AK +FD + E D W++M Y QN
Sbjct: 433 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 492
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ +++ M+ + E +V ISAC +L +E + ++ + LI M
Sbjct: 493 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM 552
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG ++ A F + K + +++++I A +G + +LDMF M+ + PN++TF
Sbjct: 553 YMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITF 612
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL AC H GLV++G F M I+P +H CMVDLLGR+G+L++A L+
Sbjct: 613 MGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMP 672
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D TWGALLGACK H ++E+G R L+EL P+ G LL+NIYAS GKW D
Sbjct: 673 MTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLE 732
Query: 470 VKMMISETEKKKSPGCSWISS 490
++ M+++ K PGCS I +
Sbjct: 733 IRGMMTKHRVLKIPGCSMIEA 753
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 159/322 (49%), Gaps = 37/322 (11%)
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
M DA R+F+ + + +SW++++AGY GN++ AK Y +M E++ + +MI +G
Sbjct: 264 MTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMR 323
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G V EA K+FDE+ E D W+A+ C+ QN + AI + M + V + EV V A+
Sbjct: 324 GLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSAL 383
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG-------------YLDL- 298
SAC L V M ++ + + + NALI+M+SKCG LDL
Sbjct: 384 SACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLI 443
Query: 299 AWRE-----------------FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
+W F + KDV+S+SSMI+ +A + E L +F +M+ G
Sbjct: 444 SWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG 503
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
+P++ T + V++AC+ +E G K + G+ T ++D+ + G +E A
Sbjct: 504 FKPDETTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETA 562
Query: 402 HSLIMDYKDFCDAG--TWGALL 421
+ + + G TW AL+
Sbjct: 563 LEV---FYGMIEKGISTWNALI 581
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 224/402 (55%), Gaps = 40/402 (9%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT-----EKNSVT 181
Y K+G +DAQRLFD M ++++SW+++++G + G + A + RM + N VT
Sbjct: 107 YFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVT 166
Query: 182 WVAMIAG-----------------------------------YGKCGEVREAKKVFDEIS 206
+++++ YGK G + A ++F+E+
Sbjct: 167 LLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 226
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
W +M V + NGYA+ ++++ +M++ + + MV + ACT G A
Sbjct: 227 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 286
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ ++ + ++ AL+++++K G L+ + F IK++D I++++M+ +A H
Sbjct: 287 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 346
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+EA+ +F M EG+E + VTF +L+ACSH GLVE+G K FE+M+ V+ ++P +H +
Sbjct: 347 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYS 406
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
CMVDLLGRSG+LE A+ LI +G WGALLGAC+V+ N ELG+ A LL L P
Sbjct: 407 CMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPS 466
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N +L+NIY++ G W+D+ V+ ++ E ++PGCS+I
Sbjct: 467 DHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFI 508
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 62/269 (23%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH-RLGVLTSGFTFSSVLNAC 113
A+++FD++P K W SL+ + + + +M G + T SV++AC
Sbjct: 116 AQRLFDEMPN-KDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSAC 174
Query: 114 ARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
A + +L E ++I Y K+G +D A +LF+ M R+++SW+
Sbjct: 175 ADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWN 234
Query: 153 AMVA-----GYANCGN-----MKAAKEFYDRMT--------------------------- 175
+MV GYA G MK A D+ T
Sbjct: 235 SMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC 294
Query: 176 --EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ + A++ Y K G + ++ +F+EI + D W AM Y + + AI+++
Sbjct: 295 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 354
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVE 262
+M +E V + V +SAC+ G VE
Sbjct: 355 DLMVKEGVEVDHVTFTHLLSACSHSGLVE 383
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
++V AIS+CT V + + V + ++ + L+ M+ K GY + A R F +
Sbjct: 67 SLVFAISSCTS---VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHGGLVEDG 365
NKD++S++S+++ + G L+ F +MR E G +PN+VT + V++AC+ G +++G
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
K + G+ + + ++++ G+ G L+ A L
Sbjct: 184 -KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 222
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 249/494 (50%), Gaps = 61/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++FD++P+ + W ++I + ++++ L +M G T +VL A A
Sbjct: 201 AYKMFDRMPE-RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAA 259
Query: 115 RVPSLL-------EAVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSA 153
V L+ A+ G Y+K G ++ A+ +FD M ++ V+SW++
Sbjct: 260 DVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNS 319
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWV-------------------------- 183
M+ GY G + A +++M E+ VT +
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
++I+ Y KC V A +F+ ++ W AM + Y QNG A+ +
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFS 439
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ ++ MV I A +L A + + C D+ +V+ AL+ M+SKCG
Sbjct: 440 EMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCG 499
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ +A + F I ++ VI++++MI + HG + ALD+F KM+ +EPN +T++ V++
Sbjct: 500 AIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVIS 559
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV++G + F+ M + +G++P +H MVDLLGR+G++++A I +
Sbjct: 560 ACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGI 619
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
+GA+LGACK+H N E+GE AA+ L EL P++ G LLANIYAS KW V+ +
Sbjct: 620 TVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTM 679
Query: 475 SETEKKKSPGCSWI 488
+ KK+PGCS +
Sbjct: 680 EKKGLKKTPGCSVV 693
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 39/278 (14%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-------------------------- 160
++K G +++A R+F+ + ++ + M+ GYA
Sbjct: 91 FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150
Query: 161 ------CGN---MKAAKEFYDRMTEKNSVTWVAMIAG----YGKCGEVREAKKVFDEISE 207
CG+ +K KE + ++ + V + G Y KC ++ +A K+FD + E
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W + + QNG+AK A+E+ M+ E R + +V + A +G + + +
Sbjct: 211 RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSI 270
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+ + +S AL M+SKCG ++ A F + K V+S++SM+ + +G+
Sbjct: 271 HGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEP 330
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
++A+ +F KM EGI+P VT + L AC+ G +E G
Sbjct: 331 EKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG 368
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 125/265 (47%), Gaps = 2/265 (0%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+++ + K G + EA +VF+ I + + + M Y +N + A+ MR ++V+
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ C D++ + + + +++M++KC +D A++ F
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
R+ +D++S++++I F+ +G +++AL++ L+M++EG P+ +T + VL A + GL+
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G R G L T + D+ + G +E A LI D D +W +++
Sbjct: 267 GKSIHGYAIRA-GFAKLVNISTALADMYSKCGSVETAR-LIFDGMDQKTVVSWNSMMDGY 324
Query: 425 KVHVNAELGEIAARHLLELGPEKTG 449
+ E +LE G + TG
Sbjct: 325 VQNGEPEKAIAVFEKMLEEGIDPTG 349
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 264/485 (54%), Gaps = 18/485 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ +S++ +++ Q+H+ +L+ H +Y L R G + ++ +F Q
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHG-KIRHSLALFHQTIDP 93
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
FL+T+ I ++ Q+ LLY ++ + + FTFSS+L +C+
Sbjct: 94 DL-FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----------- 141
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
TK G + L + ++ + +V YA G++ +A++ +DRM E++ V+ AM
Sbjct: 142 --TKSGKLIHTHVLKFGLGIDPYVA-TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAM 198
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY-KVMRQENVRIS 244
I Y K G V A+ +FD + E D W M Y Q+G+ A+ ++ K++ + +
Sbjct: 199 ITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPD 258
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
E+ +V A+SAC+Q+G +E + V V LI M+SKCG L+ A F+
Sbjct: 259 EITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFN 318
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVE 363
KD++++++MI +A HG SQ+AL +F +M+ G++P +TFIG L AC+H GLV
Sbjct: 319 DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVN 378
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G + FE M + +GIKP EH C+V LLGR+GQL++A+ I + D+ W ++LG+
Sbjct: 379 EGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS 438
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
CK+H + LG+ A +L+ L + +G LL+NIYAS+G ++ V+ ++ E K P
Sbjct: 439 CKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEP 498
Query: 484 GCSWI 488
G S I
Sbjct: 499 GISTI 503
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 169/546 (30%), Positives = 269/546 (49%), Gaps = 69/546 (12%)
Query: 8 PRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
P + L Q+H+ L+K+ LT +H L+ L YA +F P+
Sbjct: 24 PLRADPSYLPQLHAALIKSGELTGSAKSFHS----LLEAAAASPTLLPYAVSLFRLGPRP 79
Query: 66 KTQFLWTSLIRNHVLHA-HFRQSILLYAKM-HRLGVLTSG-FTFSSVLNACARVPSL--- 119
+++ LHA H ++ L+ +M H + T + L +C+R+ +L
Sbjct: 80 PLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVG 139
Query: 120 ------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC 161
L ++I Y G + A+ +FD+ E V+ W+A+VA Y
Sbjct: 140 RGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKN 199
Query: 162 GN-MKAAKEF---------YDRMTEKNSVT------------WVA--------------- 184
G+ M+ + F +D +T + VT WVA
Sbjct: 200 GDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLV 259
Query: 185 --MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
++ Y KCGE+ +A+++FD + D W+AM Y Q + A+ ++ M+ V
Sbjct: 260 TALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVE 319
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
++V MV +SAC LG +E + +V T + AL+ ++KCG +D A
Sbjct: 320 PNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEA 379
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + K+ +++++I A +G+ +EAL++F MR GIEP VTFIGVL ACSH LV
Sbjct: 380 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLV 439
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G + F+ M R +GIKP EH CMVDLLGR+G +++A+ I +A W ALL
Sbjct: 440 EEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
+C VH N +GE A + ++ L P +G+ LL+NIYAS G+WKD+ +V+ + + +K+
Sbjct: 500 SCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKT 559
Query: 483 PGCSWI 488
PGCS I
Sbjct: 560 PGCSLI 565
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 215/402 (53%), Gaps = 40/402 (9%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN----SVTW 182
Y K G + A R+F++MA RN ++WSA+V G+ CG M A + M + S T
Sbjct: 278 YAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTS 337
Query: 183 VA------------------------------------MIAGYGKCGEVREAKKVFDEIS 206
VA +++ Y K G + +A +FD++
Sbjct: 338 VASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV 397
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
D ++A+ YVQNG A A +++ M+ NV+ MV I AC+ L ++
Sbjct: 398 VKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKC 457
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
V + NALI M++KCG +DL+ + F + +D++S+++MI + HG
Sbjct: 458 GHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGL 517
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+EA +FL M+++ EP+ VTFI +++ACSH GLV +G + F +M +GI P EH
Sbjct: 518 GKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYI 577
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
MVDLL R G L++A+ I D WGALLGAC+VH N +LG+ + + +LGPE
Sbjct: 578 GMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPE 637
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
TGN LL+NI+++ G++ ++ V+++ E KKSPGCSWI
Sbjct: 638 GTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWI 679
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 59/365 (16%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+LS AR +FDQIP + +LIR + L L + R + +TF VL
Sbjct: 78 DLSLARHLFDQIPAPGIHD-YNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 111 NACARVPSL--LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
AC+ + L AV C + GL D LF S +A+V YA C + + A
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHAD---LFVS---------TALVDVYAKCASFRHAA 184
Query: 169 EFYDRMTEKNSVTWVAMIAGY---GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
+ RM ++ V W AM+AGY GK + + + P+AS A+ Q+G
Sbjct: 185 TVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHG- 243
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
A+ + + +VR AC+ L H D V A
Sbjct: 244 ---ALSQGRAVHAYSVR-----------ACS----------LHDHKD------GVLVGTA 273
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG---I 342
L+ M++KCG+L A R F + ++ +++S+++ F G+ EA +F M +G +
Sbjct: 274 LLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFL 333
Query: 343 EPNQVTFIGVLTACSHGGLVEDGC--KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
P V L AC++ + D C KQ + G+ ++ + ++G +++
Sbjct: 334 SPTSVA--SALRACAN---LSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQ 388
Query: 401 AHSLI 405
A +L
Sbjct: 389 ATTLF 393
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 5/235 (2%)
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG++ A+ +FD+I P + A+ Y G A A + R+ + +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ AC+ L D+ A + H +VS AL+ +++KC A F R+ +DV
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+++++M+ +A HGK + + L M+++ PN T + +L + G + G
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 372 MTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
R + + + T ++D+ + G L A S + + + TW AL+G
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYA-SRVFEAMAVRNEVTWSALVGG 308
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 250/495 (50%), Gaps = 80/495 (16%)
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-------LE 121
+ W SLI +S+ ++ M +L + + TF + +C+ + L +
Sbjct: 48 YSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQ 107
Query: 122 AVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
A++ G Y+K G + +A+ LFD + RN+++W++++ GY + A
Sbjct: 108 ALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEA 167
Query: 168 ----KEFYDRMTEKN------SVTWVAMIA------------------------------ 187
KEF +E N SV VAMI+
Sbjct: 168 LMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVM 227
Query: 188 --------GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK-VMRQ 238
Y KCGEV ++KVFD+++E D W +M Y QNG + A E++ +++
Sbjct: 228 GVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKA 287
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN-----ALIHMHSKC 293
+ +EV + + AC G + + L V + YV+N ++I M+ KC
Sbjct: 288 GGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVI-----KMGYVNNVIMATSIIDMYCKC 342
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G ++A F +K K+V S+++MI + HG ++EALD+F +M G++PN +TFI VL
Sbjct: 343 GQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVL 402
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
ACSH G +E+G + F M+ + ++P EH CMVDLLGR+G +++A++LI K D
Sbjct: 403 AACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRD 462
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WG+LL AC++H + EL EI+AR L +L P G LLANIYA G+WKD E ++++
Sbjct: 463 FVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRIL 522
Query: 474 ISETEKKKSPGCSWI 488
+ + K PG S +
Sbjct: 523 VKDRGLVKPPGYSLV 537
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 71/281 (25%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM---------HRLGVLTS 102
LS AR +FD+IP+ + WTSLI +V + ++++++ + +G
Sbjct: 133 LSNARVLFDEIPR-RNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVD 191
Query: 103 GFTFSSVLNACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFD 141
SVL+AC+RV + + ++ Y K G + ++++FD
Sbjct: 192 SVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFD 251
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE------------------------- 176
MAE++V+SW++M+A YA G A E + M +
Sbjct: 252 DMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALR 311
Query: 177 ---------------KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
N + ++I Y KCG+ A+ FD + E + W AM Y
Sbjct: 312 VGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYG 371
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+G+A+ A++++ M V+ + + + ++AC+ G +E
Sbjct: 372 MHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLE 412
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
K FD D W ++ + G + ++ + MR+ +++ + AI +C+ L
Sbjct: 40 KYFDR---TDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
D+ + + +VS+ALI M+SKCG L A F I +++++++S+IT
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPN---------QVTFIGVLTACS 357
+ + + EAL +F + E E N V I VL+ACS
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACS 203
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 106/266 (39%), Gaps = 65/266 (24%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG------FT 105
+S +R+VFD + + K W S+I ++A S + H G+L +G T
Sbjct: 243 VSLSRKVFDDMAE-KDVVSWNSMI---AVYAQNGLSTDAFEVFH--GMLKAGGGKYNEVT 296
Query: 106 FSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
S++L ACA L +C + ++ M NVI ++++ Y CG +
Sbjct: 297 LSTLLLACAH-EGALRVGMCLHDQVIKMGYVN---------NVIMATSIIDMYCKCGQAE 346
Query: 166 AAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI-------------------- 205
A+ +D M EKN +W AMIAGYG G REA VF ++
Sbjct: 347 MARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACS 406
Query: 206 --------------------SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
EP + M + GY K A + K M+ VR
Sbjct: 407 HAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMK---VRRDF 463
Query: 246 VAMVGAISACTQLGDVEMAAILAKHV 271
V ++AC DVE+A I A+ +
Sbjct: 464 VLWGSLLAACRIHKDVELAEISAREL 489
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 234/441 (53%), Gaps = 21/441 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++FD++ + K W++LI + + ++I + MH++GV+ S L+ACA
Sbjct: 194 ACKLFDEMLE-KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACA 252
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMKAAKE 169
+ L+ + +L S++ E + +A++ Y+ CG++ A++
Sbjct: 253 NL---------------LVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 297
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D + ++W +MI+GY KC V AK +FD + E D W++M Y QN
Sbjct: 298 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 357
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ +++ M+ + E +V ISAC +L +E + ++ + LI M
Sbjct: 358 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM 417
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG ++ A F + K + +++++I A +G + +LDMF M+ + PN++TF
Sbjct: 418 YMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITF 477
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL AC H GLV++G F M I+P +H CMVDLLGR+G+L++A L+
Sbjct: 478 MGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMP 537
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D TWGALLGACK H ++E+G R L+EL P+ G LL+NIYAS GKW D
Sbjct: 538 MTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLE 597
Query: 470 VKMMISETEKKKSPGCSWISS 490
++ M+++ K PGCS I +
Sbjct: 598 IRGMMTKHRVLKIPGCSMIEA 618
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 202/441 (45%), Gaps = 60/441 (13%)
Query: 36 YYAQFLIRL-LQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM 94
Y A LI+ P ++ Y R++F+ I F+W +IR ++ + LY M
Sbjct: 11 YAASRLIKFSTHFPFIHIDYTRRIFNFIENTNC-FMWNMMIRAYIQTNSPHFAFTLYKSM 69
Query: 95 HRLGVLTSGFTFSSVLNACARVPSLLEA---------------------VICGYTKIGLM 133
+ +T+ ++ AC+ S EA +I ++ M
Sbjct: 70 LSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNM 129
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
DA R+F+ + + +SW++++AGY GN++ AK Y +M E++ + +MI +G G
Sbjct: 130 TDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRG 189
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
V EA K+FDE+ E D W+A+ C+ QN + AI + M + V + EV V A+S
Sbjct: 190 LVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALS 249
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG-------------YLDL-A 299
AC L V M ++ + + + NALI+M+SKCG LDL +
Sbjct: 250 ACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLIS 309
Query: 300 WRE-----------------FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
W F + KDV+S+SSMI+ +A + E L +F +M+ G
Sbjct: 310 WNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGF 369
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
+P++ T + V++AC+ +E G K + G+ T ++D+ + G +E A
Sbjct: 370 KPDETTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETAL 428
Query: 403 SLIMDYKDFCDAG--TWGALL 421
+ + + G TW AL+
Sbjct: 429 EV---FYGMIEKGISTWNALI 446
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 252/488 (51%), Gaps = 32/488 (6%)
Query: 13 FNQLK---QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
N LK QVH+++L +P ++ GD + + VF+ I + +
Sbjct: 83 LNMLKLGHQVHAHMLLRGLQPTA---LVGSKMVAFYASSGD-IDSSVSVFNGIGE-PSSL 137
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
L+ S+IR + + +++ Y MH G FTF VL + L +V G
Sbjct: 138 LFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVE----LLSVWMGKCV 193
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
GL+ FD ++++ Y CG + A + +D MT ++ +W A++AGY
Sbjct: 194 HGLILRIGLQFDLYVA------TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN--VRISEVA 247
K G + A +F+ + + W M Y Q+G A+ A+ ++ M +E+ VR + V
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA-----LIHMHSKCGYLDLAWRE 302
++ + AC QL +E + + E C R SNA L M++KCG L A
Sbjct: 308 IMSVLPACAQLSTLERG----RQIHELAC-RMGLNSNASVLIALTAMYAKCGSLVDARNC 362
Query: 303 FSRIKN--KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F ++ K++I++++MITA+A +G +A+ F +M GI+P+ +TF G+L+ CSH G
Sbjct: 363 FDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSG 422
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LV+ G K F M+ + I P EH C+ DLLGR+G+L +A L+ + WG+L
Sbjct: 423 LVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSL 482
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L AC+ H N E+ E AAR L L PE TGN LL+N+YA G+W++ + ++ ++ K
Sbjct: 483 LAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTK 542
Query: 481 KSPGCSWI 488
KSPGCSWI
Sbjct: 543 KSPGCSWI 550
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 231/441 (52%), Gaps = 20/441 (4%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSIL-----LYAKMHRLGVLTSGFTFSSV 109
AR+ FD++ K + W+++I + + + L L +M R GV + TF S+
Sbjct: 334 ARETFDRMSK-RDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSI 392
Query: 110 LNACARVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
L AC+ +L + + +K+G D R++ +A+ YA CG++ A
Sbjct: 393 LKACSVHGALEQGRQIHAEISKVGFESD----------RSL--QTAIFNMYAKCGSIYEA 440
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
++ + +M KN V W +++ Y KCG++ A+KVF E+S + W M Y Q+G
Sbjct: 441 EQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIA 500
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
E+ M+ E + V ++ + AC L +E ++ + + V+ +LI
Sbjct: 501 KVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLI 560
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+SKCG + A F +I N+D +++++M+ + HG EA+D+F +M E + PN++
Sbjct: 561 GMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEI 620
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF V++AC GLV++G + F +M F +KP +H CMVDLLGR+G+L++A I
Sbjct: 621 TFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQR 680
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
D W ALLGACK H N +L E AA H+L L P L+NIYA G+W DS
Sbjct: 681 MPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDS 740
Query: 468 EIVKMMISETEKKKSPGCSWI 488
V+ ++ + KK G S I
Sbjct: 741 TKVRKVMDDKGLKKDRGESSI 761
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 202/459 (44%), Gaps = 85/459 (18%)
Query: 82 AHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---------------------LL 120
+++I L + + G+L + T+ ++ CA++ L
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF--YDRM---- 174
++I Y+K G + +++F M R+V++WS+M+A YA GN AK F ++RM
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYA--GNNHPAKAFDTFERMKDAN 174
Query: 175 TEKNSVTWV-----------------------------------AMIAGYGKCGEVREAK 199
E N +T++ A+I Y KCGE+ A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLAC 234
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
++F ++ E + W A+ Q+ A E+Y+ M Q + + V V +++C
Sbjct: 235 EIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+ + H+ E + V+NALI M+ KC + A F R+ +DVIS+S+MI
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIA 354
Query: 320 AFADHG-KSQEALD----MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+A G + +E+LD + +MR EG+ PN+VTF+ +L ACS G +E G +Q
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQG-RQIHAEIS 413
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALL----------G 422
G + T + ++ + G + +A + M+ K+ W +LL
Sbjct: 414 KVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVV---AWASLLTMYIKCGDLTS 470
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
A KV + + +L+ G ++G+ A + + +SM
Sbjct: 471 AEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSM 509
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/508 (23%), Positives = 212/508 (41%), Gaps = 103/508 (20%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
Y LI GD ++ QVF ++ + W+S+I + + H ++ + +M
Sbjct: 114 YLGNSLINFYSKFGD-VASVEQVFRRMT-LRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLE----------------------AVICGYTKIGLM 133
+ + TF S+L AC S+LE A+I Y+K G +
Sbjct: 172 DANIEPNRITFLSILKACNNY-SMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEI 230
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWV------ 183
A +F M ERNV+SW+A++ A + A E Y++M + N+VT+V
Sbjct: 231 SLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSC 290
Query: 184 -----------------------------AMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
A+I Y KC +++A++ FD +S+ D W+
Sbjct: 291 NTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWS 350
Query: 215 AMTVCYVQNGYAKA-----AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
AM Y Q+GY ++ + MR+E V ++V + + AC+ G +E +
Sbjct: 351 AMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHA 410
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS------------- 316
+ + + + A+ +M++KCG + A + FS+++NK+V++++S
Sbjct: 411 EISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTS 470
Query: 317 ------------------MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
MI +A G + ++ M+ EG +P++VT I +L AC
Sbjct: 471 AEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGA 530
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
+E G K G++ T T ++ + + G++ +A + + D D W
Sbjct: 531 LSALERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEART-VFDKISNRDTVAWN 588
Query: 419 ALLGACKVH-VNAELGEIAARHLLELGP 445
A+L H + E ++ R L E P
Sbjct: 589 AMLAGYGQHGIGPEAVDLFKRMLKERVP 616
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 218/403 (54%), Gaps = 42/403 (10%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN----SVTW 182
Y K G + A+R+FD+M RN ++WSA++ G+ C M A + M + S T
Sbjct: 283 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 183 VA------------------------------------MIAGYGKCGEVREAKKVFDEIS 206
+A +++ Y K G + +A +FDE++
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
D ++A+ YVQNG A+ A ++K M+ NV MV I AC+ L ++
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462
Query: 267 LAKHVD-EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
V G T+ + NALI M++KCG +DL+ + F+ + ++D++S+++MI + HG
Sbjct: 463 SHGSVIIRGLASETS-ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 521
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+EA +FL+M N G P+ VTFI +L+ACSH GLV +G F +M +G+ P EH
Sbjct: 522 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHY 581
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
CMVDLL R G L++A+ I D W ALLGAC+V+ N +LG+ +R + ELGP
Sbjct: 582 ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGP 641
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E TGN LL+NIY++ G++ ++ V+++ KKSPGCSWI
Sbjct: 642 EGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWI 684
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 199/471 (42%), Gaps = 87/471 (18%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQS--ILLYAKMHRLGVLTSGFTFSS 108
+LS A +FDQIP + + LIR + + + + LY +M R V + +TF
Sbjct: 72 HLSRAHHLFDQIPSPDVR-TYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 109 VLNACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERN 147
L AC+ + + A++ Y K + DA +F +M R+
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMT------EKNSVTWVAMIA-------------- 187
+++W+AM+AGYA+ G A M N+ T VA++
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 188 -------------------------------GYGKCGEVREAKKVFDEISEPDASCWAAM 216
Y KCG + A++VFD + + W+A+
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENV-RISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
+V A ++K M + + +S ++ A+ AC L + M L + +
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
N+L+ M++K G +D A F + KD +SYS++++ + +G+++EA +F
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDG-CKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
KM+ +EP+ T + ++ ACSH ++ G C ++ R G+ T ++D+ +
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR--GLASETSICNALIDMYAK 488
Query: 395 SGQLEKAHSL--IMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
G+++ + + +M +D +W ++ +H LG+ A LE+
Sbjct: 489 CGRIDLSRQVFNMMPSRDIV---SWNTMIAGYGIH---GLGKEATALFLEM 533
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 14/243 (5%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA--IEMYKVMRQENVRISEVAMVG 250
G + A +FD+I PD + + Y + AA + +Y+ M + V +
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
A+ AC+ L D + +H +VS AL+ M+ KC L A F+ + +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNE--GIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
++++++M+ +A HG A+ L M+ + + PN T + +L + G + G
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 369 FELMTRVF------GIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
R LT+ + T ++D+ + G L A + D + TW A
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR-VFDAMPARNEVTWSA 309
Query: 420 LLG 422
L+G
Sbjct: 310 LIG 312
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 226/408 (55%), Gaps = 40/408 (9%)
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT----- 175
+ ++ Y K+G +DAQRLFD M R+++SW+++++G + G + A + RM
Sbjct: 178 DRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 237
Query: 176 EKNSVTWVAMIAG-----------------------------------YGKCGEVREAKK 200
+ N VT +++++ YGK G + A +
Sbjct: 238 QPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 297
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
+F+E+ W +M V + NGYA+ ++++ +M++ + + MV + ACT G
Sbjct: 298 LFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGL 357
Query: 261 VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
A + ++ + ++ AL+++++K G L+ + F IK++D I++++M+
Sbjct: 358 GRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAG 417
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
+A H +EA+ +F M EG+E + VTF +L+ACSH GLVE+G K FE+M+ V+ ++P
Sbjct: 418 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 477
Query: 381 LTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHL 440
+H +CMVDLLGRSG+LE A+ LI +G WGALLGAC+V+ N ELG+ A L
Sbjct: 478 RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQL 537
Query: 441 LELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L L P N +L+NIY++ G W+ + V+ ++ E ++PGCS+I
Sbjct: 538 LSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFI 585
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 62/269 (23%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH-RLGVLTSGFTFSSVLNAC 113
A+++FD++P + W SL+ + + + +M G + T SV++AC
Sbjct: 193 AQRLFDEMPN-RDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSAC 251
Query: 114 ARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
A + +L E ++I Y K+G +D A +LF+ M R+++SW+
Sbjct: 252 AXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWN 311
Query: 153 AMVA-----GYANCGN-----MKAAKEFYDRMT--------------------------- 175
+MV GYA G MK A D+ T
Sbjct: 312 SMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC 371
Query: 176 --EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ + A++ Y K G + ++ +F+EI + D W AM Y + + AI+++
Sbjct: 372 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLF 431
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVE 262
+M +E V + V +SAC+ G VE
Sbjct: 432 DLMVKEGVEVDHVTFTHLLSACSHSGLVE 460
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
++V AIS+CT V + + V + ++ + L+ M+ K GY + A R F +
Sbjct: 144 SLVFAISSCTS---VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSHGGLVEDG 365
N+D++S++S+++ + G L+ F +MR E G +PN+VT + V++AC+ G +++G
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
K + G+ + + ++++ G+ G L+ A L
Sbjct: 261 -KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 299
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 209/370 (56%), Gaps = 3/370 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I GY K G + A+++F+ M +R+V+SW+ ++AGY G++ AA E ++ + E+++V+
Sbjct: 178 SMIDGYVKNGEIGAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIPERDAVS 237
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEP--DASCWAAMTVCYVQ-NGYAKAAIEMYKVMRQ 238
W MI G + G V A K FD + + W ++ + + Y + + K++
Sbjct: 238 WNCMIDGCARVGNVSLAVKFFDRMPAAVRNVVSWNSVLALHARVKNYGECLMLFGKMVEG 297
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
+E +V ++AC LG + M + + + L+ M++KCG +DL
Sbjct: 298 REAVPNEATLVSVLTACANLGKLSMGMWVHSFIRSNNIKPDVLLLTCLLTMYAKCGAMDL 357
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A F + + V+S++SMI + HG +AL++FL+M G +PN TFI VL+AC+H
Sbjct: 358 AKGVFDEMPVRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLSACTH 417
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
G+V +G F+LM RV+ I+P EH CMVDLL R+G +E + LI + WG
Sbjct: 418 AGMVMEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWG 477
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALL C H+++ELGEI A+ +EL P+ G LL+N+YA+ G+W D E V++MI E
Sbjct: 478 ALLSGCSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVEHVRLMIKEKG 537
Query: 479 KKKSPGCSWI 488
+K S +
Sbjct: 538 LQKEAASSLV 547
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ A+ VFD++P ++ W S+I + LH +++ L+ +M + G + TF SVL+
Sbjct: 355 MDLAKGVFDEMP-VRSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLS 413
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
AC ++E G+ LM QR++ E V + MV A G ++ ++E
Sbjct: 414 ACTHAGMVME----GWWYFDLM---QRVYK--IEPKVEHYGCMVDLLARAGLVENSEELI 464
Query: 172 DRMTEK-NSVTWVAMIAG-----YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
+ K S W A+++G + GE+ K F E+ D + ++ Y G
Sbjct: 465 RMVPVKAGSAIWGALLSGCSNHLDSELGEI--VAKRFIELEPQDIGPYILLSNMYAAKG 521
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 248/439 (56%), Gaps = 25/439 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ AR VF+Q+P+ K WT++++++V + +++ L+ +M + + ++++++++
Sbjct: 209 IDQARSVFNQMPE-KNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNL----YSWNTMIS 263
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
C + EA +LF M RN +SW+ MV+G A G K A+E++
Sbjct: 264 GCLDGKRVNEAF--------------KLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYF 309
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D+M K+ W AMI Y + EA ++F+ ++E + W AM Y ++ A++
Sbjct: 310 DQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMK 369
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+M + +R +E M +++C + ++ A LA V C+ +SNALI M+S
Sbjct: 370 HLILMLRSCIRPNETTMTIILTSCWGMLELMQAHALAIVVG---CECETSLSNALITMYS 426
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
+ G + + F +K KDV+S+++M+ AF HG AL +F M G +P+++TF+G
Sbjct: 427 RIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVG 486
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+ACSH GLV+ G K F+ M+R +G++P EH +C+VD+LGR+GQ+ +A ++ +
Sbjct: 487 VLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPE- 545
Query: 412 C--DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
C D GALLGAC++H N E+ + + L+EL P +G LLAN++A+ G W +
Sbjct: 546 CERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAE 605
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ + + +K PG S I
Sbjct: 606 VRKKMKDRNVRKVPGFSQI 624
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 187/426 (43%), Gaps = 65/426 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ AR++FD++P +T++I ++ + R++ L+ M ++
Sbjct: 84 NVRGARKLFDEMPH-HDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAE-------- 134
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
A+I GY K GLMD AQ++FD+M + NV SW+++++GY G + A +
Sbjct: 135 ----------SAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQL 184
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+D+M KN V+W M+ GY + G + +A+ VF+++ E + W AM YV NG A+
Sbjct: 185 FDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEAL 244
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHM 289
+++ M Q N+ + IS C V A L N VS ++
Sbjct: 245 KLFHEMPQRNL----YSWNTMISGCLDGKRVNEAFKLFH-----LMPLRNAVSWTIMVSG 295
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD-------------------------- 323
++ G+ LA F ++ NKD+ ++++MITA+ D
Sbjct: 296 LARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMI 355
Query: 324 -----HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
H EA+ + M I PN+ T +LT+C G++E Q + V G
Sbjct: 356 DGYARHRPDGEAMKHLILMLRSCIRPNETTMTIILTSC--WGMLE--LMQAHALAIVVGC 411
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAAR 438
+ T ++ + R G + + K D +W A+L A H + +
Sbjct: 412 ECETSLSNALITMYSRIGDISSSRIAFESLKA-KDVVSWTAMLLAFTYHGHGDHALHVFG 470
Query: 439 HLLELG 444
H+L+ G
Sbjct: 471 HMLKSG 476
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 53/297 (17%)
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
+ G + A++LFD M + +S++AM+ Y ++ A++ + M ++ V AMI G
Sbjct: 81 RCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDG 140
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y K G + A+KVFD + + + W ++ Y ++G A +++ M +NV +S M
Sbjct: 141 YAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNV-VSWTTM 199
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V LG Y N LI D A F+++
Sbjct: 200 V--------LG---------------------YARNGLI---------DQARSVFNQMPE 221
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
K+ IS+++M+ ++ D+G++ EAL +F +M + N ++ +++ C G V + K
Sbjct: 222 KNTISWTAMMKSYVDNGRTDEALKLFHEMP----QRNLYSWNTMISGCLDGKRVNEAFKL 277
Query: 369 FELMTRVFGIKPLTEHL--TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
F LM PL + T MV L R+G + A D D W A++ A
Sbjct: 278 FHLM-------PLRNAVSWTIMVSGLARNGFTKLAREYF-DQMPNKDIAAWNAMITA 326
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 260/488 (53%), Gaps = 34/488 (6%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
T L+++H++LLKT H + L PG +++YA VF QI F W
Sbjct: 36 TMKDLQKIHAHLLKTGLAKHPLA--VSPVLAFCATSPGGDINYAYLVFTQI-HSPNLFSW 92
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
++IR F QS H + + SSV PS+ +A Y ++G
Sbjct: 93 NTIIRG------FSQS---STPHHAISLFIDMLIVSSVQPHRLTYPSVFKA----YAQLG 139
Query: 132 LMDDAQRL----------FDSMAERNVISWSAMVAGYANCGNMKAA-KEFYDRMTEKNSV 180
L +L FD RN I + YANCG + K FY+RM + + V
Sbjct: 140 LAHYGAQLHGRVIKLGLQFDPFI-RNTI-----IYMYANCGFLSEMWKAFYERM-DFDIV 192
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
W +MI G KCGEV E++K+FDE+ + W +M YV+NG + A++++ M++E
Sbjct: 193 AWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEER 252
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
++ SE MV ++A +LG ++ + ++ + + V+ ++I M+ KCG + A+
Sbjct: 253 IKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAF 312
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
+ F K + S+++MI A +G EA+ +F ++ + P+ VTF+GVLTAC++ G
Sbjct: 313 QVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSG 372
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LV+ + F LM++ + I+P +H +CMVD LGR+G LE+A LI + DA W +L
Sbjct: 373 LVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSL 432
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L AC+ H N EL + AA+H+++L + LL+NIYA+ +++++ ++ + E + +
Sbjct: 433 LSACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIE 492
Query: 481 KSPGCSWI 488
K PGCS I
Sbjct: 493 KEPGCSLI 500
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 243/429 (56%), Gaps = 16/429 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD I KT W S+I + +++++ LL+ KM G+ GFTF ++L+ C+
Sbjct: 142 ARKLFDDITD-KTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCS 200
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+ L + Y + ++ ++I +A+V YA CGN+ +A+ +DR
Sbjct: 201 QSRDL---DLGRYVHFCIEITGVKI-------DIIVRNALVDMYAKCGNLHSAQAIFDRT 250
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
EKN V+W +MI+ Y + G + A+++FD++ + W +M CY++ G + A++++
Sbjct: 251 QEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFN 310
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV--DEGCCDRTNYVSNALIHMHSK 292
MR V E +V ++AC+QLGD+ M + ++ ++G T Y N+LI M++K
Sbjct: 311 KMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLY--NSLIDMYAK 368
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG + A F + K+++S++ +I A A HG EA+ +F +M+ +G P+++T G+
Sbjct: 369 CGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGL 428
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+ACSH GLV+ G F+ M ++ + EH CMVDLLGR G L +A LI
Sbjct: 429 LSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKP 488
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SEIVK 471
D WGALLGAC++H N E+G+ + LLEL P G L++NIY +W+D +I K
Sbjct: 489 DVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRK 548
Query: 472 MMISETEKK 480
+MI KK
Sbjct: 549 LMIDRGIKK 557
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G+++ A+++FD+I +P+ + ++ Y + A+ +++ M + +E + +
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 95
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
AC A ++ + +V NALI ++ CG + A + F I +K ++
Sbjct: 96 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLV 155
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++SMI +A G +EA +F KMR G+EP+ TF+ +L+ CS ++ G +
Sbjct: 156 SWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLG-RYVHFC 214
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+ G+K +VD+ + G L A + I D + +W +++ A H + E+
Sbjct: 215 IEITGVKIDIIVRNALVDMYAKCGNLHSAQA-IFDRTQEKNVVSWTSMISAYAQHGSIEV 273
Query: 433 GEIAARHLLELGPEKT 448
AR + + P K
Sbjct: 274 ----ARQIFDQMPGKN 285
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 213/381 (55%), Gaps = 4/381 (1%)
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
V+N C L ++I G +G ++DA+ +F+ M E N +S++ M+ GYA G M +K
Sbjct: 333 VVNPCLNA---LNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSK 389
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAK 227
+++M + + MI+ Y + GE+ +A ++F+E +E D W +M Y+ +G +
Sbjct: 390 RLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPE 449
Query: 228 AAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
A+++Y M + +++ + AC+ LG ++ +L H+ + + YV +LI
Sbjct: 450 EALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLI 509
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+SKCG + A F I + +V +++++I A HG EA+ +F M +G+ PN
Sbjct: 510 DMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGA 569
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+GVL+ACS GLV +G K F M R + + P EH C+VDLLGRSG + +A I
Sbjct: 570 TFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKK 629
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
D WGALL AC ++ E+GE A + P+ + +L+NIYA +G+W++
Sbjct: 630 MPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREK 689
Query: 468 EIVKMMISETEKKKSPGCSWI 488
+V+ ++ + KK PGCSWI
Sbjct: 690 MMVRKILRGFKVKKDPGCSWI 710
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 175/394 (44%), Gaps = 66/394 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQ+FDQ+P+ +T W ++I ++ H F +++ L MHR + S TFSSVL+
Sbjct: 88 LDVARQLFDQMPQ-RTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLS 146
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
CAR+ L + A++ Y + +A+R+FD + RN +
Sbjct: 147 VCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVL 206
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
WS M+ GY C M A + +M ++ V W +I+G+ K G+
Sbjct: 207 WSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGD---------------- 250
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKV-MRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
G K A+EM+++ MR +E + AC +LG + + +
Sbjct: 251 -------------GCGK-ALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHG 296
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
+ + + + AL+ + +C +D A R + N + + +S+I G+ ++
Sbjct: 297 LLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIED 356
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT--RVFGIKPLTEHLTC 387
A +F N E N V++ ++ + GG ++D + FE M +F
Sbjct: 357 AELVF----NGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNT------- 405
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
M+ + R+G+++KA L + K+ D TW +++
Sbjct: 406 MISVYSRNGEIDKALELFEETKNEKDPVTWNSMI 439
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREA-------KK 200
+IS + ++ YA + A++ +D+M ++ V+W MI+ Y K G EA +
Sbjct: 72 IISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHR 131
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR--QENVRISEVAMVGAISACTQL 258
++SE S + ++VC + V++ E+ + A++ ++C ++
Sbjct: 132 SHMKLSESTFS--SVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 189
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
G+ A+ V + R + + ++ + C +D A F ++ +DV++++++I
Sbjct: 190 GE-------ARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLI 242
Query: 319 TAFADHGKS-QEALDMF-LKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ F+ +G +AL+MF L MR+ PN+ TF V+ AC G++ G
Sbjct: 243 SGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVG 291
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 246/483 (50%), Gaps = 48/483 (9%)
Query: 1 MTSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFD 60
M S+ L S QLK++H+ +++T + + L+ L L GD + YARQVFD
Sbjct: 12 MLSELLRASSSKPKQLKKIHAVVIRT---GFSEKNSLLTQLLENLVLVGD-MCYARQVFD 67
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
++PK + FLW +L + +V + +S+LLY KM LGV FT+ V+ A ++ L
Sbjct: 68 EMPKPRI-FLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQ----L 122
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+ CG + + + G+ G +
Sbjct: 123 GVLPCGVS--------------------LHAHVLKNGFECLG-----------------I 145
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
++ Y K GE+ A+ +F+ + D W A VQ G + A+E + M +
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADA 205
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V+ +V +SAC QLG +++ + + + V NA + MH KCG + A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGSTEAAR 265
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +K ++V+S+S+MI +A +G S EAL +F M+NEG+ PN VTF+GVL+ACSH G
Sbjct: 266 VLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 361 LVEDGCKQFELMTRVF--GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
LV +G + F LM R+ ++P EH CMVDLLGRSG LE+A+ I + D G WG
Sbjct: 326 LVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDTGIWG 385
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALLGAC VH + LG+ A L+E P+ LL+NIYA+ GKW + V+ + +
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 479 KKK 481
KK
Sbjct: 446 TKK 448
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 148/343 (43%), Gaps = 55/343 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
LS A +F+ + + K W + I V + ++ + KM V FT S+L+
Sbjct: 160 LSSAEFLFESM-QVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLS 218
Query: 112 ACARVPSL-----------LEAVICG----------YTKIGLMDDAQRLFDSMAERNVIS 150
AC ++ SL E + C + K G + A+ LFD M +RNV+S
Sbjct: 219 ACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVS 278
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVF---- 202
WS M+ GYA G+ A + M + N VT++ +++ G V E K+ F
Sbjct: 279 WSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMV 338
Query: 203 ---DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQL 258
D+ EP +A M ++G + A E K MR E + + GA + AC
Sbjct: 339 RLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVE----PDTGIWGALLGACAVH 394
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK---NKDVISYS 315
D+ + +A + E D +Y L ++++ G D + S+++ K V +YS
Sbjct: 395 RDMILGQKVADVLVETAPDIGSY-HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYS 453
Query: 316 SM-----ITAF----ADHGKSQ---EALDMFL-KMRNEGIEPN 345
S+ I F H +S+ E LD L K+RN G P+
Sbjct: 454 SVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPD 496
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 242/461 (52%), Gaps = 28/461 (6%)
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA 112
S AR +FD+ + K + +IR++V + + +++ ++ M +TF VL A
Sbjct: 88 SVARYIFDRSLE-KNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKA 146
Query: 113 CARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISW 151
C+ + +L A++ Y K G + +A+++ D M R+V+SW
Sbjct: 147 CSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSW 206
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKN------SVTWVAMIAGYGKCGEVREAKKVFDEI 205
++MVAGYA G A E M N ++ ++ + Y V+ +F+ +
Sbjct: 207 NSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERM 266
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
++ + W M YV N A+ ++ M + ++ V + + AC L + +
Sbjct: 267 TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGR 326
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
L K++++G + NAL+ M++KCG L+ A F +++ +DV+S++SM++A+ G
Sbjct: 327 RLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSG 386
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+ +A+ +F KM + G P+ + F+ VL+ACSH GL++ G F +MT +GI P EH
Sbjct: 387 QGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF 446
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
CMVDL GR+G++E+A+S I + WGALL AC+VH ++G +AA L +L P
Sbjct: 447 ACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAP 506
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
+++G LL+NIYA G WKD V+ + + KK PG S
Sbjct: 507 KQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 145/355 (40%), Gaps = 75/355 (21%)
Query: 109 VLNACARV-PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN------- 160
V+N R+ P+L ++ Y+ G A+ +FD E+NV+ ++ M+ Y N
Sbjct: 62 VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEA 121
Query: 161 ---------CG-------------------NMKAAKEFYDRMT----EKNSVTWVAMIAG 188
C N++ + +D + + N A++A
Sbjct: 122 LSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAM 181
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
YGKCG +REA+KV D++ D W +M Y Q+G A+E+ K M N+
Sbjct: 182 YGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN------ 235
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
D A L+ V + Y+ N F R+
Sbjct: 236 ----------HDAGTMASLSPVVCYTSLENVQYIHNM-----------------FERMTK 268
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
K++IS++ MI + ++ EA+ +FL+M G++P+ VT +L AC + G +
Sbjct: 269 KNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRL 328
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ + + ++P ++D+ + G LE+A + D D +W +++ A
Sbjct: 329 HKYIEK-GNLRPNLLLENALLDMYAKCGCLEEARD-VFDKMRLRDVVSWTSMMSA 381
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 253/514 (49%), Gaps = 82/514 (15%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSIL----LYAKMHRL---------- 97
L A +F +P + W +++ + H + ++ + +MHRL
Sbjct: 61 LPDAAHIFATMPA-RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 98 -------GVLTSGFTFSSVLNACARV---------PSLLEAVICG------YTKIGLMDD 135
G L G +SV C R L + V+ G Y K G +
Sbjct: 120 LPLLAQQGALAQG---TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY 176
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN----SVTWVA------- 184
A+R+FD+M RN ++WSA++ G+ C M A + M + S T +A
Sbjct: 177 ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA 236
Query: 185 -----------------------------MIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
+++ Y K G + +A +FDE++ D ++A
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD-EG 274
+ YVQNG A+ A ++K M+ NV MV I AC+ L ++ V G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
T+ + NALI M++KCG +DL+ + F+ + ++D++S+++MI + HG +EA +F
Sbjct: 357 LASETS-ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
L+M N G P+ VTFI +L+ACSH GLV +G F +M +G+ P EH CMVDLL R
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
G L++A+ I D W ALLGAC+V+ N +LG+ +R + ELGPE TGN LL
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 535
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+NIY++ G++ ++ V+++ KKSPGCSWI
Sbjct: 536 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWI 569
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 161/372 (43%), Gaps = 63/372 (16%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT------EKNSV 180
Y K + DA +F +M R++++W+AM+AGYA+ G A M N+
Sbjct: 55 YVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAS 114
Query: 181 TWVAMIA---------------------------------------------GYGKCGEV 195
T VA++ Y KCG +
Sbjct: 115 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 174
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV-RISEVAMVGAISA 254
A++VFD + + W+A+ +V A ++K M + + +S ++ A+ A
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 234
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C L + M L + + N+L+ M++K G +D A F + KD +SY
Sbjct: 235 CASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSY 294
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG-CKQFELMT 373
S++++ + +G+++EA +F KM+ +EP+ T + ++ ACSH ++ G C ++
Sbjct: 295 SALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVII 354
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--IMDYKDFCDAGTWGALLGACKVHVNAE 431
R G+ T ++D+ + G+++ + + +M +D +W ++ +H
Sbjct: 355 R--GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIV---SWNTMIAGYGIH---G 406
Query: 432 LGEIAARHLLEL 443
LG+ A LE+
Sbjct: 407 LGKEATALFLEM 418
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 113/272 (41%), Gaps = 62/272 (22%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSV 109
+L YAR+VFD +P + + W++LI VL + Q+ LL+ M G+ S + +S
Sbjct: 173 SLLYARRVFDAMPA-RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA 231
Query: 110 LNACARVPSL-----LEAVICG----------------YTKIGLMDDAQRLFDSMAERNV 148
L ACA + L L A++ Y K GL+D A LFD MA ++
Sbjct: 232 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 291
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG---------------- 188
+S+SA+V+GY G + A + +M E ++ T V++I
Sbjct: 292 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 351
Query: 189 -------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
Y KCG + +++VF+ + D W M Y +G K A
Sbjct: 352 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 411
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
++ M V + +SAC+ G V
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLV 443
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
A+ AC+ L D + +H +VS AL+ M+ KC L A F+ + +D
Sbjct: 16 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 75
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNE--GIEPNQVTFIGVLTACSHGGLVEDG--- 365
++++++M+ +A HG A+ L M+ + + PN T + +L + G + G
Sbjct: 76 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135
Query: 366 ---CKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
C + L LT+ + T ++D+ + G L A + D + TW A
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR-VFDAMPARNEVTWSA 194
Query: 420 LLG 422
L+G
Sbjct: 195 LIG 197
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 17/189 (8%)
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG-YAKAAIEMYKV-MRQENV 241
A++ Y KC + +A +F + D W AM Y +G Y A + + M+ +
Sbjct: 50 ALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRL 109
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN----------YVSNALIHMHS 291
R + +V + Q G + + + C + AL+ M++
Sbjct: 110 RPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYA 169
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG---IEPNQVT 348
KCG L A R F + ++ +++S++I F + +A +F M +G + P +
Sbjct: 170 KCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA 229
Query: 349 FIGVLTACS 357
L AC+
Sbjct: 230 --SALRACA 236
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 218/403 (54%), Gaps = 42/403 (10%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN----SVTW 182
Y K G + A+R+FD+M RN ++WSA++ G+ C M A + M + S T
Sbjct: 283 YAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTS 342
Query: 183 VA------------------------------------MIAGYGKCGEVREAKKVFDEIS 206
+A +++ Y K G + +A +FDE++
Sbjct: 343 IASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA 402
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
D ++A+ YVQNG A+ A ++K M+ NV MV I AC+ L ++
Sbjct: 403 VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRC 462
Query: 267 LAKHVD-EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
V G T+ + NALI M++KCG +DL+ + F+ + ++D++S+++MI + HG
Sbjct: 463 SHGSVIIRGLASETS-ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG 521
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+EA +FL+M N G P+ VTFI +L+ACSH GLV +G F +M +G+ P EH
Sbjct: 522 LGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY 581
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
CMVDLL R G L++A+ I D W ALLGAC+V+ N +LG+ +R + ELGP
Sbjct: 582 ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGP 641
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E TGN LL+NIY++ G++ ++ V+++ KKSPGCSWI
Sbjct: 642 EGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWI 684
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 199/471 (42%), Gaps = 87/471 (18%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQS--ILLYAKMHRLGVLTSGFTFSS 108
+LS A +FDQIP + + LIR + + + + LY +M R V + +TF
Sbjct: 72 HLSRAHHLFDQIPSPDVR-TYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 109 VLNACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERN 147
L AC+ + + A++ Y K + DA +F +M R+
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMT------EKNSVTWVAMIA-------------- 187
+++W+AM+AGYA+ G A M N+ T VA++
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 188 -------------------------------GYGKCGEVREAKKVFDEISEPDASCWAAM 216
Y KCG + A++VFD + + W+A+
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENV-RISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
+V A ++K M + + +S ++ A+ AC L + M L + +
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
N+L+ M++K G +D A F + KD +SYS++++ + +G+++EA +F
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDG-CKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
KM+ +EP+ T + ++ ACSH ++ G C ++ R G+ T ++D+ +
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR--GLASETSICNALIDMYAK 488
Query: 395 SGQLEKAHSL--IMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
G+++ + + +M +D +W ++ +H LG+ A LE+
Sbjct: 489 CGRIDLSRQVFNMMPSRDIV---SWNTMIAGYGIH---GLGKEATALFLEM 533
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 14/243 (5%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA--IEMYKVMRQENVRISEVAMVG 250
G + A +FD+I PD + + Y + AA + +Y+ M + V +
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
A+ AC+ L D + +H +VS AL+ M+ KC L A F+ + +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNE--GIEPNQVTFIGVLTACSHGGLVEDG--- 365
++++++M+ +A HG A+ L M+ + + PN T + +L + G + G
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 366 ---CKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
C + L LT+ + T ++D+ + G L A + D + TW A
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR-VFDAMPARNEVTWSA 309
Query: 420 LLG 422
L+G
Sbjct: 310 LIG 312
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 249/495 (50%), Gaps = 63/495 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD + + T LW +++ V ++ F ++IL++ M + G+ T ++VL A
Sbjct: 160 ARKVFDGMLERDT-VLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVA 218
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ L + + C Y+K G ++ A+ LF + + +++S++A
Sbjct: 219 ELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNA 278
Query: 154 MVAGYANCGN-----MKAAKEFYDRMTEKNSVTWVAMI---------------------- 186
M++GY C N ++ KE + NS + V +I
Sbjct: 279 MISGY-TCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKS 337
Query: 187 -------------AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
Y + E+ A+ +FDE SE + W AM Y QNG + AI ++
Sbjct: 338 GVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLF 397
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M++ VR + V + +SAC QLG + + + ++ + +VS ALI M++KC
Sbjct: 398 QEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKC 457
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A R FS + K+ +++++MI+ + HG EAL++F +M + + P VTF+ VL
Sbjct: 458 GSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVL 517
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
ACSH GLV +G + F M G +PL EH CMVDLLGR+G L+KA I
Sbjct: 518 YACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPG 577
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WGALLGAC +H +A L +A+ L EL P+ G LL+NIY++ + ++ V+ +
Sbjct: 578 PPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGV 637
Query: 474 ISETEKKKSPGCSWI 488
+ + K+PGC+ I
Sbjct: 638 VKRRKLAKTPGCTLI 652
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 205/485 (42%), Gaps = 75/485 (15%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ R T +QL Q H+ ++ L H+ + +L L + A +F IP
Sbjct: 16 LINRVSTLHQLNQTHAQII--LNGLHNDLVTVTKLTHKLSHLKA--IDQASLLFSTIPN- 70
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL-TSGFTFSSVL-------------- 110
FL+ LIR L+ ++ LY + + L FT++ V+
Sbjct: 71 PDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHA 130
Query: 111 -NACARVPSLL---EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
+ A S L A++ Y K + A+++FD M ER+ + W+ MV+G
Sbjct: 131 HSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDE 190
Query: 167 AKEFYDRMTEK----NSVTWVAMIAG---------------------------------- 188
A + M + +S T A++ G
Sbjct: 191 AILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLAC 250
Query: 189 -YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y KCGE+ A+ +F +I +PD + AM Y N ++++ ++K + +++ +
Sbjct: 251 LYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSS 310
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+VG I G + + + + + VS AL ++S+ ++ A F
Sbjct: 311 IVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESS 370
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
K + S+++MI+ +A +G +++A+ +F +M+ + PN VT +L+AC+ G + G
Sbjct: 371 EKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW 430
Query: 368 QFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSL--IMDYKDFCDAGTWGALLG 422
+L+ R + ++ T ++D+ + G + +A L +M K +A TW A++
Sbjct: 431 VHDLINR----ESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK---NAVTWNAMIS 483
Query: 423 ACKVH 427
+H
Sbjct: 484 GYGLH 488
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 31/220 (14%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + AR +FD+ + K+ W ++I + + ++I L+ +M + V + T +S+
Sbjct: 357 NEIESARLLFDESSE-KSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSI 415
Query: 110 LNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNV 148
L+ACA++ +L A+I Y K G + +AQRLF M E+N
Sbjct: 416 LSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNA 475
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVF-- 202
++W+AM++GY G A ++ M VT+++++ G VRE ++F
Sbjct: 476 VTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRS 535
Query: 203 ---DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
D EP +A M + G A++ + M E
Sbjct: 536 MVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVE 575
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ A+++F +P+ K W ++I + LH + +++ L+ +M V +G TF SVL
Sbjct: 459 SITEAQRLFSMMPE-KNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVL 517
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMK 165
AC+ GL+ + +F SM + ++ MV GN+
Sbjct: 518 YACSHA--------------GLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLD 563
Query: 166 AAKEFYDRM-TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
A +F +M E W A++ + A+ D++ E D
Sbjct: 564 KALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELD 608
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 150/501 (29%), Positives = 252/501 (50%), Gaps = 64/501 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+L A+ +F+ I + W ++I HA Q+I A+M + GV + T S+
Sbjct: 157 HLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSI 216
Query: 110 LNACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNV 148
L + +L + A++ Y K L+ A+++F+++ ++N
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND 276
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM---------------------------------- 174
+ WSAM+ GY ++ A YD M
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336
Query: 175 ------TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+ ++ ++I+ Y KCG + A DE+ D ++A+ VQNGYA+
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEK 396
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH-VDEGCCDRTNYVSNALI 287
A+ +++ M+ + M+ + AC+ L ++ + V G + T+ + NA+I
Sbjct: 397 ALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTS-ICNAII 455
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M+SKCG + ++ F R++N+D+IS+++MI + HG EAL +F +++ G++P+ V
Sbjct: 456 DMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDV 515
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
T I VL+ACSH GLV +G F M++ F IKP H CMVDLL R+G L++A++ I
Sbjct: 516 TLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQR 575
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
+ WGALL AC+ H N E+GE ++ + LGPE TGN L++NIY+S+G+W D+
Sbjct: 576 MPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDA 635
Query: 468 EIVKMMISETEKKKSPGCSWI 488
++ + KKSPGCSW+
Sbjct: 636 AYIRSIQRHHGYKKSPGCSWV 656
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 202/443 (45%), Gaps = 70/443 (15%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + AR VFDQIPK + LW +IR + F+QSI LY M +LGV + FTF +
Sbjct: 55 NEIQLARHVFDQIPK-PSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFL 113
Query: 110 LNACARVPSL-------LEAVICG--------------YTKIGLMDDAQRLFDSMA--ER 146
L AC+ + +L A I G Y K G + AQ LF+S++ +R
Sbjct: 114 LKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDR 173
Query: 147 NVISWSAMVAGYA----------------------NCGNM----------------KAAK 168
++++W+AM+A ++ N + KA
Sbjct: 174 DIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIH 233
Query: 169 EFYDR-MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+Y R N V A++ Y KC + A+K+F+ +++ + CW+AM YV +
Sbjct: 234 AYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSIS 293
Query: 228 AAIEMYKVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
A+ +Y M + + + + AC QL D++ L H+ + D V N+L
Sbjct: 294 DALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSL 353
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M++KCG +D A + KD +SYS++I+ +G +++AL +F +M++ GI P
Sbjct: 354 ISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYL 413
Query: 347 VTFIGVLTACSHGGLVEDG--CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
T I +L ACSH ++ G C + T V G T ++D+ + G++ +
Sbjct: 414 ETMIALLPACSHLAALQHGTCCHGY---TVVRGFTNDTSICNAIIDMYSKCGKITISRE- 469
Query: 405 IMDYKDFCDAGTWGALLGACKVH 427
I D D +W ++ +H
Sbjct: 470 IFDRMQNRDIISWNTMIIGYGIH 492
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 234/435 (53%), Gaps = 21/435 (4%)
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
Q+P+ L +LIR A ++ LYA + R G+L + T S+L + A P++
Sbjct: 32 QLPRSVE--LHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVP 89
Query: 121 EAVICGYT------KIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-CGNMKAAKEFYDR 173
A + T K+GL +R V+ +A++ +A G++
Sbjct: 90 GAAVLALTVHTHAVKLGL------------DRFVLVSNALIRVHAGFLGSLADGLLLLRT 137
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
++ T+ +I Y + G + +A+ +FDE+ +A W+AM YVQ G + A+ ++
Sbjct: 138 AAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIF 197
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M+ E+VR + +VG ++AC Q G +E + ++ + AL+ M+SKC
Sbjct: 198 ARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKC 257
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + LA F R++ K+V+++++MI A HG+ EA+ +F +M + GI P+ + FIGVL
Sbjct: 258 GEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVL 317
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC+H GLV+ G + F+ M R +GIKP EH CMVDLL R+G L +A +I D
Sbjct: 318 CACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPD 377
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
A WGAL+ C+ H N E E A+H + L P+K+G LL+NIYA+ G+ + ++ +
Sbjct: 378 ALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHL 437
Query: 474 ISETEKKKSPGCSWI 488
+ E K+PGCS +
Sbjct: 438 MREKGVDKTPGCSTV 452
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
Q K VH YL K + ++ L+ + G+ + A VF+++ + K W
Sbjct: 224 ALEQGKWVHGYLKAHGIKIN---LFFGTALVDMYSKCGE-VQLAMDVFERM-QYKNVLAW 278
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
T++I+ +H ++++L+A+M G+ F VL AC T G
Sbjct: 279 TTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCAC--------------THAG 324
Query: 132 LMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKEFYDRMT-EKNSVTWVAM 185
L+D + LFDSM + I + MV A G + AKE +M E +++ W A+
Sbjct: 325 LVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGAL 384
Query: 186 IAG--YGKCGEVREAKKVFDEISEPDAS-CWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
+AG + K E E + EPD S + ++ Y +G +A E+ +MR++ V
Sbjct: 385 MAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGV 443
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 145/481 (30%), Positives = 248/481 (51%), Gaps = 20/481 (4%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--DNLSYARQVFDQIPKCKTQ 68
KT QL Q+H+++L+ H Q L + + G D + YA VF Q
Sbjct: 20 KTRTQLPQIHAHILR------HHLHQSNQILSHFISVCGALDKMGYANLVFHQTQN-PNL 72
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT 128
L+ S+I+ + L S+LL+++M G+ FTF+ +L +C+ + + I
Sbjct: 73 LLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCS---GICDNRIGKGV 129
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
++ F S+ ++ Y +CG M+ AK+ +D M +++ + W MI G
Sbjct: 130 HGVVIVVGFERFSSIR-------IGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRG 182
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
+ K G++ ++F ++ + W +M Q+G A+E+++ M + +
Sbjct: 183 FCKVGDIEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATV 242
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSNALIHMHSKCGYLDLAWREFSRIK 307
V + C +LG V++ + + + R V N+L+ + KCG L+ AWR F+ +
Sbjct: 243 VTILPVCARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMP 302
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
K+V+S+++MI+ +GK + D+F +M N+G+ PN TF+GVL+ C+H GLVE G
Sbjct: 303 QKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRN 362
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F MT ++P EH CMVDLL R+G +E+A L+ +A WG+LL A +
Sbjct: 363 LFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTI 422
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+ + E A + L+EL P +GN LL+N+YA GKW + E V+ ++ E +K+PG S
Sbjct: 423 GDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSM 482
Query: 488 I 488
+
Sbjct: 483 V 483
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 241/470 (51%), Gaps = 44/470 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVL------------------------------- 80
++ AR++FD++PK + +F+WT+LI +V
Sbjct: 208 MASARKLFDEMPK-RNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLH 266
Query: 81 HAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLF 140
H F ++ L+ KM LGV T++SV++ACA G+ +G A L
Sbjct: 267 HGLFEDALTLFRKMRLLGVQVDESTYTSVISACAD---------GGFFLLGKQVHAYILK 317
Query: 141 DSM-AERNVI--SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVRE 197
+ + +R+ + + ++ Y G + A++ + M K+ +TW +++GY G + E
Sbjct: 318 NELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEE 377
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
AK F ++ E + W M QNG+ + A++++ M+ + ++ A GAI+AC+
Sbjct: 378 AKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSV 437
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
LG +E L + D T V NA+I M+++CG ++ A F + D +S++SM
Sbjct: 438 LGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSM 497
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
I A HG +A++++ +M EGI P++ TF+ VL+ACSH GLVE+G + F M +G
Sbjct: 498 IAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYG 557
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
I P +H M+DL R+G+ A ++I A W ALL C+ H N +LG AA
Sbjct: 558 IAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAA 617
Query: 438 RHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
L +L P+ G LL+N+YAS+G+W D + ++ + KK P CSW
Sbjct: 618 EKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSW 667
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 186/425 (43%), Gaps = 62/425 (14%)
Query: 51 NLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
NL AR++F++ P + + ++I + +I L+ M FTF+SV
Sbjct: 94 NLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASV 153
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN------ 163
L+A + + CG ++ +F ++ +A+++ Y C +
Sbjct: 154 LSASTLI--FYDERQCGQMHGTVVKFGIEIFPAVL-------NALLSVYVKCASSPLVSS 204
Query: 164 ---MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
M +A++ +D M ++N W +I GY + G++ A+++ D ++E W AM Y
Sbjct: 205 SSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGY 264
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ-----LGDVEMAAILAKHVDEGC 275
+ +G + A+ +++ MR V++ E ISAC LG A IL ++
Sbjct: 265 LHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNP-- 322
Query: 276 CDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSS----------------- 316
DR +S N LI ++ K G +D A + F + KD+I++++
Sbjct: 323 -DRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSF 381
Query: 317 --------------MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
MI+ A +G ++AL +F +M+ +G EPN F G +TACS G +
Sbjct: 382 FAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGAL 441
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G +Q G M+ + R G +E A ++ + F D +W +++
Sbjct: 442 ENG-RQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMP-FVDPVSWNSMIA 499
Query: 423 ACKVH 427
A H
Sbjct: 500 ALGQH 504
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 156/335 (46%), Gaps = 34/335 (10%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR--MTEKNSVTWVAMIAGYGKCG 193
A++LFD + + +VI+ + ++ Y+ GN+K A+E ++ + +++V + AMI GY
Sbjct: 67 ARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMN 126
Query: 194 EVREAKKVFDEIS----EPD----ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
+ A ++F + +PD AS +A T+ + + +M+ + + + I
Sbjct: 127 DGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDE---RQCGQMHGTVVKFGIEIFP 183
Query: 246 VAMVGAISA---CTQLGDVEMAAILA---KHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ +S C V ++++A K DE R ++ LI + + G L A
Sbjct: 184 AVLNALLSVYVKCASSPLVSSSSLMASARKLFDE-MPKRNEFIWTTLITGYVRNGDLTGA 242
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
+ + I++++MI+ + HG ++AL +F KMR G++ ++ T+ V++AC+ G
Sbjct: 243 REILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADG 302
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHL----TCMVDLLGRSGQLEKAHSLI--MDYKDFCD 413
G G KQ + P + L ++ L + G+++ A + M KD
Sbjct: 303 GFFLLG-KQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDII- 360
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKT 448
TW LL +VNA E A ++ PEK
Sbjct: 361 --TWNTLLSG---YVNAGRMEEAKSFFAQM-PEKN 389
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 160/403 (39%), Gaps = 67/403 (16%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQVH+Y+LK P + + L + AR++F ++P K W +L+
Sbjct: 309 KQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMP-VKDIITWNTLLS 367
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+V ++ +A+M +LT +I G + G + A
Sbjct: 368 GYVNAGRMEEAKSFFAQMPEKNLLT------------------WTVMISGLAQNGFGEQA 409
Query: 137 QRLFDSMA----ERNVISWSAMVAGYANCGNMKAAKEFYDRMTE--KNSVTWV--AMIAG 188
+LF+ M E N +++ + + G ++ ++ + ++ +S V AMI
Sbjct: 410 LKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITM 469
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y +CG V A+ +F + D W +M Q+G+ AIE+Y+ M +E +
Sbjct: 470 YARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTF 529
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+ +SAC+ G VE EG N N+++ + D
Sbjct: 530 LTVLSACSHAGLVE----------EG-----NRYFNSMLENYGIAPGED----------- 563
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC-SHGGL---VED 364
Y+ MI F GK +A ++ M E P + +L C +HG + +E
Sbjct: 564 ----HYARMIDLFCRAGKFSDAKNVIDSMPFEARAP---IWEALLAGCRTHGNMDLGIEA 616
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
K F+L+ + G L L+ M LGR + + L+ D
Sbjct: 617 AEKLFKLIPQHDGTYVL---LSNMYASLGRWNDVARTRKLMRD 656
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 246/456 (53%), Gaps = 22/456 (4%)
Query: 40 FLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHA--HFRQSILL--YAKMH 95
L+R+L +L YA ++ D ++ + N +LHA R +LL +A+ H
Sbjct: 22 LLLRVLA--AGDLRYAARLLDSYSSSSPP---SAPLHNRLLHALAAARHPLLLPCFARAH 76
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
RL +LT +F+ + ++ + + +K G + + + SA+V
Sbjct: 77 RLRLLTP-LSFTLLFSSPSSSTTTTRLAHALLSKSG---------HAASSGDPYLASALV 126
Query: 156 AGYANCGNMKAAKEFYDRMT-EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
A YA G++ ++ +D + ++ A+++ Y +CG V +A+ +F + + + W
Sbjct: 127 ASYARSGHLAESRRVFDELPPHSDAAARNALLSAYARCGRVDDAESLFAGMPDRNVISWT 186
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
AM Y QNG + A+ + M + VR +EV + + AC +G + + + ++
Sbjct: 187 AMVSGYAQNGRHEEAVRTFLEMWEGCGVRPNEVTVSSVLPACAAVGALALGRKVERYARG 246
Query: 274 GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI-KNKDVISYSSMITAFADHGKSQEALD 332
YV+NAL+ M++KCG + AW F I K +D+ S++SMI AFA HG +E L
Sbjct: 247 RGMLTNVYVANALVEMYAKCGSIRRAWMVFRGIGKQRDLCSWNSMIMAFAVHGLWREVLG 306
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F K+R G +P+ +TF+GV+ AC+HGGLV++G F M FG+KP EH CMVDLL
Sbjct: 307 LFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKLLFNSMREEFGLKPRIEHYGCMVDLL 366
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR+G L++A SLI DA WGALLGAC H N EL E+A L+ L P+ T N
Sbjct: 367 GRAGLLKEADSLIASMPMEPDAVIWGALLGACSFHGNLELAEVAVEKLMRLEPQNTANLV 426
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L+NIYAS GKW V ++ E + KKS G S+I
Sbjct: 427 ILSNIYASHGKWDGVAQVWKLLKEKDHKKSAGYSFI 462
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 43/221 (19%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
Y A L+ + G ++ A VF I K + W S+I +H +R+ + L+ K+
Sbjct: 254 YVANALVEMYAKCG-SIRRAWMVFRGIGKQRDLCSWNSMIMAFAVHGLWREVLGLFHKLR 312
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
G G TF V+ AC T GL+D+ + LF+SM E
Sbjct: 313 MTGAKPDGITFVGVILAC--------------THGGLVDEGKLLFNSMREEF-------- 350
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWA 214
+K E Y M+ G+ G ++EA + + EPDA W
Sbjct: 351 -------GLKPRIEHYG-----------CMVDLLGRAGLLKEADSLIASMPMEPDAVIWG 392
Query: 215 AMT-VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
A+ C A + + K+MR E + + ++ I A
Sbjct: 393 ALLGACSFHGNLELAEVAVEKLMRLEPQNTANLVILSNIYA 433
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 253/497 (50%), Gaps = 65/497 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++FD +P K WT+L+ + ++ ++++ L+ M + G+ F SS+L +CA
Sbjct: 303 AHKLFDGMPN-KNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCA 361
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L ++I Y K + +A+++FD A +V+ ++A
Sbjct: 362 SLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNA 421
Query: 154 MVAGYANCGNM----KAAKEFYD---RMTEKNSVTWV----------------------- 183
M+ GY+ G A F+D R+ + +T+V
Sbjct: 422 MIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 184 ------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
A+IA Y C +++++ VFDE+ D W +M YVQ + A+
Sbjct: 482 KFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALN 541
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ ++ R E V ++A L +++ + + + Y++NAL+ M++
Sbjct: 542 LFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYA 601
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG + A + F ++DV+ ++S+I+++A+HG+ ++AL M KM EGIEPN +TF+G
Sbjct: 602 KCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVG 661
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+ACSH GLVEDG KQFELM R FGI+P TEH CMV LLGR+G+L +A LI
Sbjct: 662 VLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTK 720
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
A W +LL C N EL E AA + P+ +G+ LL+NIYAS G W D++ V+
Sbjct: 721 PAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVR 780
Query: 472 MMISETEKKKSPGCSWI 488
+ K PG SWI
Sbjct: 781 ERMKFEGVVKEPGRSWI 797
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 200/450 (44%), Gaps = 73/450 (16%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+ S+L+K+ D+ Y LI G N+ YAR VFD +P+ K+ WT++I
Sbjct: 169 QLQSFLVKS---RFDRDVYVGTLLIDFYLKEG-NIDYARLVFDALPE-KSTVTWTTMISG 223
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP-------------------- 117
V S+ L+ ++ V+ G+ S+VL+AC+ +P
Sbjct: 224 CVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKD 283
Query: 118 -SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
SL+ +I Y K G + A +LFD M +N+ISW+ +++GY K A E + M +
Sbjct: 284 ASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPK 343
Query: 177 ---------------------------------------KNSVTWVAMIAGYGKCGEVRE 197
+S ++I Y KC + E
Sbjct: 344 FGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTE 403
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYA---KAAIEMYKVMRQENVRISEVAMVGAISA 254
A+KVFD + D + AM Y + G A+ ++ MR +R S + V + A
Sbjct: 404 ARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA 463
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
L + ++ + + + + + +ALI ++S C L + F +K KD++ +
Sbjct: 464 SASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF--ELM 372
+SM + + +++EAL++FL+++ P++ TF+ ++TA + ++ G ++F +L+
Sbjct: 524 NSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLG-QEFHCQLL 582
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
R P + ++D+ + G E AH
Sbjct: 583 KRGLECNPYITN--ALLDMYAKCGSPEDAH 610
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 169/390 (43%), Gaps = 72/390 (18%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR--NHVLHAHFRQSILLYAK 93
Y + L+ L G + YAR+VF+++P+ + W++++ NH H + +S++++
Sbjct: 80 YLSNILMNLYSRAG-GMVYARKVFEKMPE-RNLVTWSTMVSACNH--HGFYEESLVVFLD 135
Query: 94 MHRLGVLTSG-FTFSSVLNACA-----------RVPSLL------------EAVICGYTK 129
R + + SS + AC+ ++ S L +I Y K
Sbjct: 136 FWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLK 195
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT-------- 181
G +D A+ +FD++ E++ ++W+ M++G G + + + ++ E N V
Sbjct: 196 EGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTV 255
Query: 182 -------------------------------WVAMIAGYGKCGEVREAKKVFDEISEPDA 210
+I Y KCG VR A K+FD + +
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNI 315
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W + Y QN K A+E++ M + ++ A +++C L +E + +
Sbjct: 316 ISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAY 375
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE- 329
+ +YV+N+LI M++KC L A + F DV+ +++MI ++ G E
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWEL 435
Query: 330 --ALDMFLKMRNEGIEPNQVTFIGVLTACS 357
AL++F MR I P+ +TF+ +L A +
Sbjct: 436 HDALNIFHDMRFRLIRPSLLTFVSLLRASA 465
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 39/258 (15%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +R VFD++ K K +W S+ +V + +++ L+ ++ FTF ++
Sbjct: 505 LKDSRLVFDEM-KVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVT 563
Query: 112 ACARV---------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
A + P + A++ Y K G +DA + FDS A R+V+
Sbjct: 564 AAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI- 205
W+++++ YAN G + A + ++M E N +T+V +++ G V + K F+ +
Sbjct: 624 WNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 206 ---SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
EP+ + M + G A E+ + M + I ++ +S C + G+VE
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSL---LSGCAKAGNVE 740
Query: 263 MA------AILAKHVDEG 274
+A AIL+ D G
Sbjct: 741 LAEYAAEMAILSDPKDSG 758
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAM-TVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y + G + A+KVF+++ E + W+ M + C Y ++ + R +E
Sbjct: 89 YSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYI 148
Query: 248 MVGAISACTQLGDVE--MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+ I AC+ L M L + + DR YV LI + K G +D A F
Sbjct: 149 LSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDA 208
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ K +++++MI+ G+S +L +F ++ + P+ VL+ACS +E G
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGG 268
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGA 423
KQ +G + + ++D + G++ AH L M K+ +W LL
Sbjct: 269 -KQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNII---SWTTLLSG 324
Query: 424 CK 425
K
Sbjct: 325 YK 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-R 338
Y+SN L++++S+ G + A + F ++ ++++++S+M++A HG +E+L +FL R
Sbjct: 79 TYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWR 138
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQ---FELMTRVFGIKPLTEHL----TCMVDL 391
PN+ + ACS GL DG + F+L + F +K + T ++D
Sbjct: 139 TRKNSPNEYILSSFIQACS--GL--DGSGRWMVFQLQS--FLVKSRFDRDVYVGTLLIDF 192
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
+ G ++ A L+ D TW ++ C
Sbjct: 193 YLKEGNIDYAR-LVFDALPEKSTVTWTTMISGC 224
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 241/480 (50%), Gaps = 66/480 (13%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----------- 119
W +L+ VL+ H +++ L+ + + T+++V+ CA + L
Sbjct: 274 WNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVL 333
Query: 120 ----------LEAVICGYTKIGLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGNMKAAK 168
+ A++ Y+K G + +A +F M+ +NV+SW+AM+ G G++ A
Sbjct: 334 KRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAA 393
Query: 169 EFYDRMTEK-----------------------------------NSVTWVAMIAGYGKCG 193
+ RM E S+ A++A Y K
Sbjct: 394 ALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLC 453
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
EA +F I + D W+AM CY Q G + A ++ M ++ +E + I
Sbjct: 454 NTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVID 513
Query: 254 AC-TQLGDVEMA----AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
AC + V++ AI KH C VS+AL+ M+++ G ++ A F R +
Sbjct: 514 ACASPTAGVDLGRQFHAISIKHR----CHDALCVSSALVSMYARKGSIESAQCIFERQTD 569
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+D++S++SM++ +A HG SQ+ALD+F +M EGIE + VTF+ V+ C+H GLVE+G +
Sbjct: 570 RDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRY 629
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F+ M R +GI P EH CMVDL R+G+L++A SLI W LLGACKVH
Sbjct: 630 FDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHK 689
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N ELG++AA LL L P + LL+NIY++ GKWK+ + V+ ++ + KK GCSWI
Sbjct: 690 NVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWI 749
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 175/432 (40%), Gaps = 61/432 (14%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL-GVLTSGFTFSS 108
++ + ARQ FD+IP T + +H Q++ + +HR G G
Sbjct: 52 NDATGARQAFDEIPHRNT---LDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVG 108
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
VL C VP + G GL CG
Sbjct: 109 VLKVCGSVPDR----VLGKQLHGLC-------------------------IRCG------ 133
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+DR + V M Y K V + +KVF+ + + + W ++ Y+Q+G
Sbjct: 134 --HDRGDVGVGTSLVDM---YMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSD 188
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNALI 287
+E++ MR E V + V +S G V++ + A+ V GCC T +V N+L+
Sbjct: 189 VMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCS-TVFVCNSLM 247
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
+M++KCG ++ A F ++ +D++S+++++ +G EAL +F R+ Q
Sbjct: 248 NMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQS 307
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVF------GIKPLTEHLTCMVDLLGRSGQLEKA 401
T+ V+ C++ KQ L ++ G +T ++D ++GQL A
Sbjct: 308 TYATVIKLCAN-------IKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNA 360
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG--PEKTGNSALLANIYA 459
+ + + +W A++ C + + L + E G P S +L A
Sbjct: 361 LDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA 420
Query: 460 SMGKWKDSEIVK 471
S+ ++++K
Sbjct: 421 SLPPQIHAQVIK 432
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 65/311 (20%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVFDQIPKCKTQ 68
K +Q+HS +LK +H Y + L+ L A +F + +
Sbjct: 320 KQLGLARQLHSSVLKR------GFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNV 373
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA-CARVPSLLEA----- 122
WT++I + + + L+++M GV + FT+S++L A A +P + A
Sbjct: 374 VSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKT 433
Query: 123 -----------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
++ Y+K+ ++A +F + +++V+SWSAM+ YA G+ A +
Sbjct: 434 NYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIF 493
Query: 172 DRMT----EKNSVTW------------------------------------VAMIAGYGK 191
+MT + N T A+++ Y +
Sbjct: 494 IKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYAR 553
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
G + A+ +F+ ++ D W +M Y Q+GY++ A+++++ M E + + V +
Sbjct: 554 KGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSV 613
Query: 252 ISACTQLGDVE 262
I C G VE
Sbjct: 614 IMGCAHAGLVE 624
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N A +F I + K W++++ + + ++ KM G+ + FT SSV+
Sbjct: 454 NTEEALSIFKMIDQ-KDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVI 512
Query: 111 NACARVPSLLE----------------------AVICGYTKIGLMDDAQRLFDSMAERNV 148
+ACA + ++ A++ Y + G ++ AQ +F+ +R++
Sbjct: 513 DACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDL 572
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
+SW++M++GYA G + A + + +M E + VT++++I G G V E ++ FD
Sbjct: 573 VSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDS 632
Query: 205 ISE-----PDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
++ P +A M Y + G A+ + + M
Sbjct: 633 MARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGM 669
>gi|147861249|emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
Length = 932
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 248/439 (56%), Gaps = 25/439 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ AR VF+Q+P+ K WT++++++V + +++ L+ +M + + ++++++++
Sbjct: 115 IDQARSVFNQMPE-KNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNL----YSWNTMIS 169
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
C + EA +LF M RN +SW+ MV+G A G K A+E++
Sbjct: 170 GCLDGKRVNEAF--------------KLFHLMPLRNAVSWTIMVSGLARNGFTKLAREYF 215
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D+M K+ W AMI Y + EA ++F+ ++E + W AM Y ++ A++
Sbjct: 216 DQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMK 275
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+M + +R +E M +++C + ++ A LA V C+ +SNALI M+S
Sbjct: 276 HLILMLRSCIRPNETTMTIILTSCWGMLELMQAHALAIVVG---CECETSLSNALITMYS 332
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
+ G + + F +K KDV+S+++M+ AF HG AL +F M G +P+++TF+G
Sbjct: 333 RIGDISSSRIAFESLKAKDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVG 392
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+ACSH GLV+ G K F+ M+R +G++P EH +C+VD+LGR+GQ+ +A ++ +
Sbjct: 393 VLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVDILGRAGQVHEAMDVVWKMPE- 451
Query: 412 C--DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
C D GALLGAC++H N E+ + + L+EL P +G LLAN++A+ G W +
Sbjct: 452 CERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSGGYVLLANVFAARGNWDEFAE 511
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ + + +K PG S I
Sbjct: 512 VRKKMKDRNVRKVPGFSQI 530
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 46/355 (12%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A+I GY K GLMD AQ++FD+M + NV SW+++++GY G + A + +D+M KN V+
Sbjct: 42 AMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVS 101
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W M+ GY + G + +A+ VF+++ E + W AM YV NG A++++ M Q N+
Sbjct: 102 WTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNL 161
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAW 300
+ IS C V A L N VS ++ ++ G+ LA
Sbjct: 162 ----YSWNTMISGCLDGKRVNEAFKLFH-----LMPLRNAVSWTIMVSGLARNGFTKLAR 212
Query: 301 REFSRIKNKDVISYSSMITAFAD-------------------------------HGKSQE 329
F ++ NKD+ ++++MITA+ D H E
Sbjct: 213 EYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGE 272
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
A+ + M I PN+ T +LT+C G++E Q + V G + T ++
Sbjct: 273 AMKHLILMLRSCIRPNETTMTIILTSC--WGMLE--LMQAHALAIVVGCECETSLSNALI 328
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
+ R G + + K D +W A+L A H + + H+L+ G
Sbjct: 329 TMYSRIGDISSSRIAFESLKA-KDVVSWTAMLLAFTYHGHGDHALHVFGHMLKSG 382
>gi|224066751|ref|XP_002302197.1| predicted protein [Populus trichocarpa]
gi|222843923|gb|EEE81470.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 247/442 (55%), Gaps = 26/442 (5%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ +R++F+ +P+ + W ++I + + + + +L+ KM S
Sbjct: 7 DIPDSRKLFEYMPE-RNVVTWNAMISGYGKNGDMKSASVLFDKM-------------STR 52
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA--ERNVISWSAMVAGYANCGNMKAAK 168
NA + + +I G+ + G M A+R F+ + +NV++W+ M+ GYA+ G M+AA+
Sbjct: 53 NAVSWIE-----MIDGFARSGDMVAARRTFNEVPFELKNVVTWTVMIDGYASKGEMEAAR 107
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
++ M ++N W +MI+GY K G V+EA+ +FD + + W ++ Y QNG+ +
Sbjct: 108 LLFEDMPQRNFFVWSSMISGYCKIGNVKEARAIFDRVPVRNLVNWNSLICGYSQNGFCEE 167
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A++ + M+ E EV +VG +SAC QL +++ + K + +V NAL+
Sbjct: 168 ALDAFGKMQNEGYEPDEVTVVGVLSACAQLSLLDVGKDVHKMICAKGMKLNEFVVNALVD 227
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M++KCG L A F R+ NK+ ++SMI+ FA HGK++EAL+ F +M +P+++T
Sbjct: 228 MYAKCGDLTGARLIFERMTNKNNACWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEIT 287
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+ VL+AC HGG VE G + F M R +G+ +H C+VDLLGR+G+++ A+ LI
Sbjct: 288 FLSVLSACVHGGFVEVGLEIFSKMER-YGLSASIKHYGCLVDLLGRAGRIQDAYHLIKSM 346
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE-KTGNS---ALLANIYASMGKW 464
+ WGA LGAC++H++ ++ E + +GN ALL NIYA G W
Sbjct: 347 PMKPNDTVWGAFLGACRIHMDNDMVEQVVEDVCTSDSSVDSGNDPHYALLLNIYAGSGSW 406
Query: 465 KDSEIVKMMISETEKKKSPGCS 486
+ + V M++++ +K+ G S
Sbjct: 407 EKAGRVSMVMADRGLQKTSGRS 428
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 155/303 (51%), Gaps = 43/303 (14%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
Y K G + D+++LF+ M ERNV++W+AM++GY G+MK+A +D+M+ +N+V+W+ MI
Sbjct: 2 YAKCGDIPDSRKLFEYMPERNVVTWNAMISGYGKNGDMKSASVLFDKMSTRNAVSWIEMI 61
Query: 187 AGYGKCGEVREAKKVFDEI--SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
G+ + G++ A++ F+E+ + W M Y G +AA +++ M Q N
Sbjct: 62 DGFARSGDMVAARRTFNEVPFELKNVVTWTVMIDGYASKGEMEAARLLFEDMPQRNF--- 118
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+V +++I + K G + A F
Sbjct: 119 ------------------------------------FVWSSMISGYCKIGNVKEARAIFD 142
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
R+ +++++++S+I ++ +G +EALD F KM+NEG EP++VT +GVL+AC+ L++
Sbjct: 143 RVPVRNLVNWNSLICGYSQNGFCEEALDAFGKMQNEGYEPDEVTVVGVLSACAQLSLLDV 202
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G K M G+K + +VD+ + G L A LI + + W +++
Sbjct: 203 G-KDVHKMICAKGMKLNEFVVNALVDMYAKCGDLTGAR-LIFERMTNKNNACWNSMISGF 260
Query: 425 KVH 427
VH
Sbjct: 261 AVH 263
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 253/514 (49%), Gaps = 82/514 (15%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSIL----LYAKMHRL---------- 97
L A +F +P + W +++ + H + ++ + +MHRL
Sbjct: 61 LPDAAHIFATMPA-RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 98 -------GVLTSGFTFSSVLNACARV---------PSLLEAVICG------YTKIGLMDD 135
G L G +SV C R L + V+ G Y K G +
Sbjct: 120 LPLLAQQGALAQG---TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY 176
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN----SVTWVA------- 184
A+R+FD+M RN ++WSA++ G+ C M A + M + S T +A
Sbjct: 177 ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA 236
Query: 185 -----------------------------MIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
+++ Y K G + +A +FDE++ D ++A
Sbjct: 237 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 296
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD-EG 274
+ YVQNG A+ A ++K M+ NV MV I AC+ L ++ V G
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
T+ + NALI M++KCG +DL+ + F+ + ++D++S+++MI + HG +EA +F
Sbjct: 357 LASETS-ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
L+M N G P+ VTFI +L+ACSH GLV +G F +M +G+ P EH CMVDLL R
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
G L++A+ I D W ALLGAC+V+ N +LG+ +R + ELGPE TGN LL
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 535
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+NIY++ G++ ++ V+++ KKSPGCSWI
Sbjct: 536 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWI 569
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 161/372 (43%), Gaps = 63/372 (16%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT------EKNSV 180
Y K + DA +F +M R++++W+AM+AGYA+ G A M N+
Sbjct: 55 YVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAS 114
Query: 181 TWVAMIA---------------------------------------------GYGKCGEV 195
T VA++ Y KCG +
Sbjct: 115 TLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSL 174
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV-RISEVAMVGAISA 254
A++VFD + + W+A+ +V A ++K M + + +S ++ A+ A
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 234
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C L + M L + + N+L+ M++K G +D A F + KD +SY
Sbjct: 235 CASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSY 294
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG-CKQFELMT 373
S++++ + +G+++EA +F KM+ +EP+ T + ++ ACSH ++ G C ++
Sbjct: 295 SALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVII 354
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--IMDYKDFCDAGTWGALLGACKVHVNAE 431
R G+ T ++D+ + G+++ + + +M +D +W ++ +H
Sbjct: 355 R--GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIV---SWNTMIAGYGIH---G 406
Query: 432 LGEIAARHLLEL 443
LG+ A LE+
Sbjct: 407 LGKEATALFLEM 418
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 113/272 (41%), Gaps = 62/272 (22%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSV 109
+L YAR+VFD +P + + W++LI VL + Q+ LL+ M G+ S + +S
Sbjct: 173 SLLYARRVFDAMPA-RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA 231
Query: 110 LNACARVPSL-----LEAVICG----------------YTKIGLMDDAQRLFDSMAERNV 148
L ACA + L L A++ Y K GL+D A LFD MA ++
Sbjct: 232 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 291
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG---------------- 188
+S+SA+V+GY G + A + +M E ++ T V++I
Sbjct: 292 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 351
Query: 189 -------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
Y KCG + +++VF+ + D W M Y +G K A
Sbjct: 352 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 411
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
++ M V + +SAC+ G V
Sbjct: 412 TALFLEMNNLGFPPDGVTFICLLSACSHSGLV 443
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
A+ AC+ L D + +H +VS AL+ M+ KC L A F+ + +D
Sbjct: 16 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 75
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNE--GIEPNQVTFIGVLTACSHGGLVEDG--- 365
++++++M+ +A HG A+ L M+ + + PN T + +L + G + G
Sbjct: 76 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135
Query: 366 ---CKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
C + L LT+ + T ++D+ + G L A + D + TW A
Sbjct: 136 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR-VFDAMPARNEVTWSA 194
Query: 420 LLGA 423
L+G
Sbjct: 195 LIGG 198
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 17/189 (8%)
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG-YAKAAIEMYKV-MRQENV 241
A++ Y KC + +A +F + D W AM Y +G Y A + + M+ +
Sbjct: 50 ALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRL 109
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN----------YVSNALIHMHS 291
R + +V + Q G + + + C + AL+ M++
Sbjct: 110 RPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYA 169
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG---IEPNQVT 348
KCG L A R F + ++ +++S++I F + +A +F M +G + P +
Sbjct: 170 KCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA 229
Query: 349 FIGVLTACS 357
L AC+
Sbjct: 230 --SALRACA 236
>gi|326524926|dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 584
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 253/519 (48%), Gaps = 72/519 (13%)
Query: 40 FLIRLLQLPGD-NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQ------SILLYA 92
F RLL +L+YAR+VFD P+ + ++W +L+R H HA ++ LY
Sbjct: 57 FATRLLAAAAPCSLAYARRVFDAAPR-RDAYMWNTLLRAHA-HAQAPAGSTAGGALQLYK 114
Query: 93 KMHRLGVLTSGFTFS---------------------SVLNACARVPSLLEAVICGYTKIG 131
+M GV +T+ +V A A + A+I Y + G
Sbjct: 115 RMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAVRFALAEDGFVHSALIAMYCQEG 174
Query: 132 LMDDAQRLF---DSMAERNVISWSAMVAGYA-NCGNMKAAKEFYDRMTE---KNSVTWV- 183
+ DA+++F ++ R V+SW+AMVAGYA NC +A F + + N +T +
Sbjct: 175 DVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQAVTVFGAMVAQGMLPNEITLIS 234
Query: 184 ----------------------------------AMIAGYGKCGEVREAKKVFDEISEPD 209
A+IA YGKCG + AK++FD ++
Sbjct: 235 FLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVNALIAMYGKCGSIAAAKELFDGMAAHT 294
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
W M Y QNG AI+ + M E V V +V +SACT+ G +E + +
Sbjct: 295 VVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTLVSVLSACTRQGALETGKWVHE 354
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
D + N L+ M++KCG + A + F ++ V+S+S+MI+A+A+HG+ +E
Sbjct: 355 LARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGLREPGVVSWSAMISAYANHGEPEE 414
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL++F M+++G++PN T VL AC H GLV++G F + R + I P E+ CMV
Sbjct: 415 ALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLAIFNSIVRDYHISPTLENYACMV 474
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
D+LGR+G+L +A+ +I D WGA LG C++H N EL E A+ L + G
Sbjct: 475 DMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGGCRLHGNLELAEFVAKDLFQSGSNDVT 534
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L+AN+Y G +D+E + + E E KK+ G S +
Sbjct: 535 FYVLMANMYFEAGMLEDAERTRRAMKEMELKKTAGHSLV 573
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/534 (29%), Positives = 270/534 (50%), Gaps = 69/534 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYA--RQVFDQIPKCKTQFLWTSL 74
K VHS++L H+ L+++ G SY RQVF+++ + W ++
Sbjct: 365 KTVHSHILNA---GHESDLAVGTALVKMYAKCG---SYKDCRQVFEKLVN-RDLIAWNTM 417
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC-------------ARVP---- 117
I ++ ++ +Y +M R G++ + T+ +LNAC +RV
Sbjct: 418 IGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGF 477
Query: 118 ----SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
S+ A+I Y + G + DA+ LF+ M +++ISW+AM+ G A G A +
Sbjct: 478 MFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQD 537
Query: 174 MTE----KNSVTWVAMI---------------------AG--------------YGKCGE 194
M + N VT+ +++ AG Y CG
Sbjct: 538 MQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGS 597
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V++A++VFD +++ D + AM Y + K A++++ +++E ++ +V + ++A
Sbjct: 598 VKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNA 657
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C G +E A + V + + NAL+ ++KCG A F ++ ++VIS+
Sbjct: 658 CANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISW 717
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+++I A HG+ Q+ L +F +M+ EGI+P+ VTF+ +L+ACSH GL+E+G + F M+R
Sbjct: 718 NAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSR 777
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
FGI P EH CMVDLLGR+GQL++ +LI + WGALLGAC++H N + E
Sbjct: 778 DFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAE 837
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AA L+L P+ L+++YA+ G W + ++ ++ + K PG SWI
Sbjct: 838 RAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWI 891
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 207/434 (47%), Gaps = 65/434 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD++ + K+ WT +I + H + ++ KM + GV+ + T+ +VLNA +
Sbjct: 298 AREVFDKM-ETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356
Query: 115 RVPSLLE----------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
P+ L+ A++ Y K G D +++F+ + R++I+W+
Sbjct: 357 G-PAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWN 415
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEK----NSVTWV------------------------- 183
M+ G A GN + A E Y +M + N +T+V
Sbjct: 416 TMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD 475
Query: 184 ----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A+I+ Y +CG +++A+ +F+++ D W AM ++G A+ ++
Sbjct: 476 GFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVF 535
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M+Q ++ + V ++AC+ ++ + + V E +V+N L++M+S C
Sbjct: 536 QDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMC 595
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A + F R+ +D+++Y++MI +A H +EAL +F +++ EG++P++VT+I +L
Sbjct: 596 GSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 655
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
AC++ G +E K+ + G T +V + G A L+ D +
Sbjct: 656 NACANSGSLE-WAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDA-LLVFDKMMKRN 713
Query: 414 AGTWGALLGACKVH 427
+W A++G C H
Sbjct: 714 VISWNAIIGGCAQH 727
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 218/492 (44%), Gaps = 86/492 (17%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC-KTQFLWTSLI 75
++VH ++++ T DQY A LI + G ++ ARQV++++ +T W +++
Sbjct: 161 REVHEHIIQHCTVL-DQYTVNA--LINMYIQCG-SIEEARQVWNKLNHTERTVHSWNAMV 216
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDD 135
+V + + +++ L +M + G+ T +L++C + PS LE CG
Sbjct: 217 VGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSC-KSPSALE---CGREIHVEAMK 272
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A+ LFD ANC ++ Y KCG +
Sbjct: 273 ARLLFD--------------VNVANC-----------------------ILNMYAKCGSI 295
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
EA++VFD++ W + Y G+++ A E+++ M+QE V + + + ++A
Sbjct: 296 HEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAF 355
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
+ ++ + H+ + V AL+ M++KCG + F ++ N+D+I+++
Sbjct: 356 SGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWN 415
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS-----------HGGLVED 364
+MI A+ G +EA +++ +M+ EG+ PN++T++ +L AC H +V+D
Sbjct: 416 TMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD 475
Query: 365 G-----------------CKQFELMTRVFG--IKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
G C + +F ++ T M+ L +SG +A ++
Sbjct: 476 GFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAV- 534
Query: 406 MDYKDFCDAG------TWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA-LLANIY 458
++D AG T+ ++L AC + G + ++E G + A L N+Y
Sbjct: 535 --FQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMY 592
Query: 459 ASMGKWKDSEIV 470
+ G KD+ V
Sbjct: 593 SMCGSVKDARQV 604
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 126/234 (53%), Gaps = 12/234 (5%)
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV----TWVAMIAG 188
MD Q L A N + M+ ++ A +E ++ + + +V T A+I
Sbjct: 126 MDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINM 185
Query: 189 YGKCGEVREAKKVFDEI--SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
Y +CG + EA++V++++ +E W AM V YVQ GY + A+++ + M+Q + +
Sbjct: 186 YIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRA 245
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY---VSNALIHMHSKCGYLDLAWREF 303
+ +S+C +E + HV E R + V+N +++M++KCG + A F
Sbjct: 246 TTMRLLSSCKSPSALECGREI--HV-EAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
+++ K V+S++ +I +AD G S+ A ++F KM+ EG+ PN++T+I VL A S
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+++ + ++Q+ R++ + + C ++ D+ + +H+ + C Y NALI+
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 289 MHSKCGYLDLAWREFSRIKN--KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
M+ +CG ++ A + ++++ + + V S+++M+ + +G +EAL + +M+ G+ +
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL-------TCMVDLLGRSGQLE 399
T + +L++C +E G R ++ + L C++++ + G +
Sbjct: 245 ATTMRLLSSCKSPSALECG--------REIHVEAMKARLLFDVNVANCILNMYAKCGSIH 296
Query: 400 KAHSLIMDYKDFCDAGTWGALLGA 423
+A + D + +W ++G
Sbjct: 297 EARE-VFDKMETKSVVSWTIIIGG 319
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 251/512 (49%), Gaps = 65/512 (12%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
LI + +L A +VFD++P+ + WT +I R +I L+ M G +
Sbjct: 170 LIDMFVKGSGDLGSAYKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV 228
Query: 101 TSGFTFSSVLNAC-------------ARVPSL-LEAVIC-------GYTKI---GLMDDA 136
FT+SSVL+AC +RV L L +C Y K G +DD+
Sbjct: 229 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 288
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGN---------------------------MKAAKE 169
+++F+ M E NV+SW+A++ Y G +KA
Sbjct: 289 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348
Query: 170 FYDRMTEKNSVTWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
D T + ++ ++I+ Y + G + +A+K FD + E + + A+
Sbjct: 349 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 408
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y +N ++ A ++ + + IS +S +G + + + +G
Sbjct: 409 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 468
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+ NALI M+S+CG ++ A++ F+ +++++VIS++SMIT FA HG + AL+MF K
Sbjct: 469 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 528
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M G +PN++T++ VL+ACSH G++ +G K F M + GI P EH CMVDLLGRSG
Sbjct: 529 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 588
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L +A I DA W LLGAC+VH N ELG AA +LE P+ LL+N
Sbjct: 589 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 648
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
++AS G+WKD ++ + E K GCSWI
Sbjct: 649 LHASAGQWKDVVKIRKSMKERNLIKEAGCSWI 680
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 190/436 (43%), Gaps = 68/436 (15%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
LI L GD + AR +F+ + + W++++ ++ Q+I + M LG
Sbjct: 67 LISLYSKCGDTET-ARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 125
Query: 101 TSGFTFSSVLNACARV---------------PSLLEAVICGYTKI--------GLMDDAQ 137
+ + F++V+ AC+ LEA +C ++ G + A
Sbjct: 126 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 185
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY----------DRMTEKNSVT------ 181
++FD M ERN+++W+ M+ +A G + A + + DR T + ++
Sbjct: 186 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 245
Query: 182 -----------------------WVAMIAGYGKC---GEVREAKKVFDEISEPDASCWAA 215
+++ Y KC G V +++KVF+++ E + W A
Sbjct: 246 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 305
Query: 216 MTVCYVQNGYA-KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
+ YVQ+G K AIE++ M ++R + + + AC L D + + +
Sbjct: 306 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 365
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
N V N+LI M+++ G ++ A + F + K+++SY++++ +A + KS+EA +F
Sbjct: 366 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 425
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
++ + GI + TF +L+ + G + G +Q G K ++ + R
Sbjct: 426 NEIADTGIGISAFTFASLLSGAASIGAMGKG-EQIHGRLLKGGYKSNQCICNALISMYSR 484
Query: 395 SGQLEKAHSLIMDYKD 410
G +E A + + +D
Sbjct: 485 CGNIEAAFQVFNEMED 500
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 11/247 (4%)
Query: 130 IGLMDDAQRLFDSMAERN----VISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVT 181
+G + A D M ++N + ++S ++ N + K + ++ E +SV
Sbjct: 4 VGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 63
Query: 182 WVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+I+ Y KCG+ A+ +F+ + ++ D W+AM C+ N AI + M +
Sbjct: 64 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 123
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIHMHSK-CGYLDL 298
+E I AC+ + I+ V G + V LI M K G L
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A++ F ++ +++++++ MIT FA G +++A+D+FL M G P++ T+ VL+AC+
Sbjct: 184 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 243
Query: 359 GGLVEDG 365
GL+ G
Sbjct: 244 LGLLALG 250
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 262/534 (49%), Gaps = 73/534 (13%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
QVH+ ++K D+ + LI L L N+ AR +FD+ + K+ W S+I
Sbjct: 215 QVHTVVVKN---GLDKTIPVSNSLINLY-LKCGNVRKARILFDKT-EVKSVVTWNSMISG 269
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL----------------- 120
+ + +++ ++ M V S +F+SV+ CA + L
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 121 ----EAVICGYTKIGLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
A++ Y+K M DA RLF + NV+SW+AM++G+ + A + + M
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 176 -----------------------------------EKNSVTWVAMIAGYGKCGEVREAKK 200
E++S A++ Y K G+V EA K
Sbjct: 390 RKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL-- 258
VF I + D W+AM Y Q G +AAI+M+ + + ++ +E ++ C
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 259 ----GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
G + +D C VS+AL+ M++K G ++ A F R + KD++S+
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLC-----VSSALLTMYAKKGNIESAEEVFKRQREKDLVSW 564
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+SMI+ +A HG++ +ALD+F +M+ ++ + VTFIGV AC+H GLVE+G K F++M R
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
I P EH +CMVDL R+GQLEKA +I + + + W +L AC+VH ELG
Sbjct: 625 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGR 684
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+AA ++ + PE + LL+N+YA G W++ V+ +++E KK PG SWI
Sbjct: 685 LAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 201/449 (44%), Gaps = 75/449 (16%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
+ G N R+VFD++ K + WT+LI + ++ + + L+ +M G + FTF
Sbjct: 139 MKGSNFKDGRKVFDEM-KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF 197
Query: 107 SSVL---------------------NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE 145
++ L N + + ++I Y K G + A+ LFD
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 146 RNVISWSAMVAGYANCG-NMKAAKEFYD--------------------------RMTEKN 178
++V++W++M++GYA G +++A FY R TE+
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 179 SVTWV------------AMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGY 225
+ V A++ Y KC + +A ++F EI + W AM ++QN
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
+ A++++ M+++ VR +E ++A + E+ A + K E R++ V A
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYE----RSSTVGTA 433
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ + K G ++ A + FS I +KD++++S+M+ +A G+++ A+ MF ++ GI+PN
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC----MVDLLGRSGQLEKA 401
+ TF +L C+ KQF F IK + C ++ + + G +E A
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFH----GFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNA 430
+ ++ D +W +++ H A
Sbjct: 550 EEVFKRQRE-KDLVSWNSMISGYAQHGQA 577
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 157/365 (43%), Gaps = 62/365 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A +FD+ P + + + SL+ +++ L+ +HRLG+ FSSVL
Sbjct: 43 LYNAHNLFDKSPG-RDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 112 ACARVPSLL--EAVICGYTKIGLMDD-------------------AQRLFDSMAERNVIS 150
A + L + C K G +DD +++FD M ERNV++
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVA---------------------- 184
W+ +++GYA + RM T+ NS T+ A
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 185 -------------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+I Y KCG VR+A+ +FD+ W +M Y NG A+
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
M+ MR VR+SE + I C L ++ L V + + AL+ +S
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 292 KCGYLDLAWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
KC + A R F I +V+S+++MI+ F + +EA+D+F +M+ +G+ PN+ T+
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 401
Query: 351 GVLTA 355
+LTA
Sbjct: 402 VILTA 406
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/267 (17%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
G + + A +D+ ++ ++++++ G+ + G +EAK++F
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF-------------- 81
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
+ ++++ + + I + + + C +L ++ K G
Sbjct: 82 -------------LNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKF---GFL 125
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
D + V +L+ + K + F +K ++V++++++I+ +A + + E L +F++
Sbjct: 126 DDVS-VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMR 184
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF--GIKPLTEHLTCMVDLLGR 394
M+NEG +PN TF L + G+ G + ++ T V G+ +++L +
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGV---GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 241
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALL 421
G + KA ++ D + TW +++
Sbjct: 242 CGNVRKAR-ILFDKTEVKSVVTWNSMI 267
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 251/486 (51%), Gaps = 70/486 (14%)
Query: 57 QVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL--GVLTSGFTFSSVLNACA 114
+VFD++ + + Q W S+I HF +++L+ +M G+ FTF+++L CA
Sbjct: 231 KVFDEMGE-RNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCA 289
Query: 115 RVPSLLEAVICGYTKIGLMDDAQR-----LFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+ D+ R L + +N+I + +V Y+ CG + AKE
Sbjct: 290 NQRN---------------DNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKE 334
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASCWAAMTVCYVQNGY 225
++RM E+N+ +W +MI GY + GE +EA ++F ++ +PD ++M V
Sbjct: 335 IFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSD 394
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA------------------AIL 267
++ E++ + + + + V + + G ++ A +IL
Sbjct: 395 SQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSIL 454
Query: 268 AKHVDEGCCDRT-NY------------------------VSNALIHMHSKCGYLDLAWRE 302
A + ++G + N+ + AL+ M+SKCG + A
Sbjct: 455 AGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITKARTV 514
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + K+++S+++MI+ ++ HG S+EAL ++ +M +G+ PN+VTF+ +L+ACSH GLV
Sbjct: 515 FDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLV 574
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G + F M + I+ EH TCMVDLLGR+G+LE A + + TWGALLG
Sbjct: 575 EEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLG 634
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC+VH + ++G +AA+ L EL P+ G +++NIYA+ G+WK+ E ++ M+ KK
Sbjct: 635 ACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKD 694
Query: 483 PGCSWI 488
PG SWI
Sbjct: 695 PGVSWI 700
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 187/414 (45%), Gaps = 76/414 (18%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-----DNLSYARQVFDQIPK 64
S +F + K +H+ ++ P A + ++L L D+L YAR++F+++P+
Sbjct: 84 SNSFQRGKSIHTQMISNGYNPD------AYLMTKILMLYARSGCLDDLCYARKLFEEMPE 137
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----- 119
+ W ++I + + ++ ++ +M ++GV FTF+S L C + S
Sbjct: 138 -RNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQ 196
Query: 120 --LEAVICGY---TKIGLM--------DDAQ---RLFDSMAERNVISWSAMVAGYANCGN 163
+ + CG+ T +G DD + ++FD M ERN ++W+++++ A G+
Sbjct: 197 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 256
Query: 164 MKAAKEFYDRMTE-----------------------------------------KNSVTW 182
A + RM E KN +
Sbjct: 257 FNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 316
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
++ Y +CG + AK++F+ ++E +A W +M Y QNG + A+ ++K M+ ++
Sbjct: 317 TELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK 376
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
++ +S+C L D + L + + + L+ M++KCG +D AW+
Sbjct: 377 PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKV 436
Query: 303 FSRI--KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ + K+++ ++S++ +A+ G +E+ + FL+M IE + +T + ++
Sbjct: 437 YDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 490
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 163/374 (43%), Gaps = 57/374 (15%)
Query: 119 LLEAVICGYTKIGLMDD---AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
L+ ++ Y + G +DD A++LF+ M ERN+ +W+ M+ YA + A +DRM
Sbjct: 108 LMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRML 167
Query: 176 E----KNSVTWV-----------------------------------AMIAGYGKCGEVR 196
+ ++ T+ A+I Y KC +
Sbjct: 168 KIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEE 227
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ--ENVRISEVAMVGAISA 254
KVFDE+ E + W ++ Q G+ A+ ++ M++ + ++ + ++
Sbjct: 228 SCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTL 287
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
C + + H+ + V L+HM+S+CG L+ A F+R+ ++ S+
Sbjct: 288 CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSW 347
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+SMI + +G++QEAL +F +M+ GI+P+ + +L++C + D K EL
Sbjct: 348 NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS---LSDSQKGRELHN- 403
Query: 375 VFGIKPLTEH----LTCMVDLLGRSGQLEKAHSLI-MDYKDFCDAGTWGALLGACKVHVN 429
F ++ E +VD+ + G ++ A + K + W ++L + N
Sbjct: 404 -FIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG---YAN 459
Query: 430 AELGEIAARHLLEL 443
L + + H LE+
Sbjct: 460 KGLKKESFNHFLEM 473
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 32/204 (15%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR VFD + K W ++I + H +++++LY +M + G+ + TF ++L+
Sbjct: 508 ITKARTVFDNM-NGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 566
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKA 166
AC+ GL+++ R+F SM E I ++ MV G ++
Sbjct: 567 ACSHT--------------GLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLED 612
Query: 167 AKEFYDRMT-EKNSVTWVAMIAGYGKCGEVRE-------AKKVFDEISEPDASCWAAMTV 218
AKEF ++M E TW A++ G C ++ A+++F E+ + + M+
Sbjct: 613 AKEFVEKMPIEPEVSTWGALL---GACRVHKDMDMGRLAAQRLF-ELDPQNPGPYVIMSN 668
Query: 219 CYVQNGYAKAAIEMYKVMRQENVR 242
Y G K ++ ++M+ + V+
Sbjct: 669 IYAAAGRWKEVEDIRQMMKMKGVK 692
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/497 (30%), Positives = 246/497 (49%), Gaps = 61/497 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD +P+ W +I +V + ++ L+ M G+ TF+S L
Sbjct: 210 LQAARKLFDTLPQSDL-VSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLP 268
Query: 112 ACARVPSLLE------------AVICGYTKIGLMDDAQRLFD-SMAERNVISWSA----- 153
+ SL V+ + K L+D + D MA++N+ S+
Sbjct: 269 CVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVV 328
Query: 154 ---MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG------------------ 188
M++GY G K A E + + ++ SVT+ ++
Sbjct: 329 CTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSII 388
Query: 189 -----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
Y KCG + A +VF+ I+E DA CW +M QNG AI
Sbjct: 389 KTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAIN 448
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M E R V++ GA+SAC L + + + +G Y ++LI M++
Sbjct: 449 LFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYA 508
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG L+ + R F R++ K+ +S++S+I+A+ +HG +E L +F +M GI+P+ VTF+G
Sbjct: 509 KCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLG 568
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+++AC H G V++G + + LMT +GI EH C+ D+ GR+G+L +A I
Sbjct: 569 IISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFP 628
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
DAG WG LLGAC +H N EL E+A++HL +L P +G LLAN+ A GKW+ V+
Sbjct: 629 PDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVR 688
Query: 472 MMISETEKKKSPGCSWI 488
++ E +K PG SWI
Sbjct: 689 SIMKERGVRKVPGYSWI 705
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 46/301 (15%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
W +IR + F ++L Y KM GV +TF V+ AC CG +
Sbjct: 26 WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKAC-----------CGLKSV 74
Query: 131 GLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
+ + M + +V S+++ YA G++ A+ +D + +K+SV W M+ GY
Sbjct: 75 KMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGY 134
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
K G+ A K+F E MR ++ + V
Sbjct: 135 VKNGDSGNAIKIFLE-------------------------------MRHSEIKPNSVTFA 163
Query: 250 GAISACTQLGDVEMAAILAKHVDEGC-CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+S C +++ L + GC + + V+N L+ M+SKC L A + F +
Sbjct: 164 CVLSVCASEAMLDLGTQL-HGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQ 222
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
D++S++ +I+ + +G EA +F M + GI+P+ +TF L C + L CK+
Sbjct: 223 SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL-PCVNELLSLKHCKE 281
Query: 369 F 369
Sbjct: 282 I 282
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 142/315 (45%), Gaps = 46/315 (14%)
Query: 44 LLQLPGDN--LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT 101
L++L +N LS A+ +FD IP+ K LW ++ +V + +I ++ +M +
Sbjct: 99 LIKLYAENGHLSDAQYLFDNIPQ-KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKP 157
Query: 102 SGFTFSSVLNACARVPSLLEAVICGYTKI-GLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
+ TF+ VL+ CA EA++ T++ G+ DS + ++A Y+
Sbjct: 158 NSVTFACVLSVCAS-----EAMLDLGTQLHGIAVGCGLELDSPVA------NTLLAMYSK 206
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
C ++AA++ +D + + + V+W +I+G Y
Sbjct: 207 CQCLQAARKLFDTLPQSDLVSWNGIISG-------------------------------Y 235
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
VQNG A +++ M ++ + + +L ++ + ++
Sbjct: 236 VQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV 295
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
++ +ALI ++ KC +++A + + + D + ++MI+ + +GK++EAL+ F + E
Sbjct: 296 FLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQE 355
Query: 341 GIEPNQVTFIGVLTA 355
++P VTF + A
Sbjct: 356 RMKPTSVTFSSIFPA 370
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 232/446 (52%), Gaps = 20/446 (4%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAH-----FRQSILLYAKMHRLGVLTSGF 104
+++ AR++FD++ K + W+++I + + + L +M R GV +
Sbjct: 307 NSVQEAREIFDRMSK-RDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKV 365
Query: 105 TFSSVLNACARVPSLLEA--VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
TF S+L AC +L + + +K+G D R++ +A+ YA CG
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSKVGFELD----------RSL--QTAIFNMYAKCG 413
Query: 163 NMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
++ A++ + +M KN V W + ++ Y KCG++ A+KVF E+ + W M Y Q
Sbjct: 414 SIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQ 473
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
NG E+ M+ E + V ++ + AC L +E ++ + + V
Sbjct: 474 NGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVV 533
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
+ +LI M+SKCG + A F ++ N+D +++++M+ + HG EA+D+F +M E +
Sbjct: 534 ATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERV 593
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
PN++T V++ACS GLV++G + F +M F + P +H CMVDLLGR+G+L++A
Sbjct: 594 SPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAE 653
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMG 462
I D W ALLGACK H N +L E AA H+LEL P L+NIYA G
Sbjct: 654 EFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAG 713
Query: 463 KWKDSEIVKMMISETEKKKSPGCSWI 488
+W DS V+ ++ + KK G S I
Sbjct: 714 RWDDSTKVRRVMDDRGLKKDRGESSI 739
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 136/585 (23%), Positives = 249/585 (42%), Gaps = 122/585 (20%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQY------HYYAQFLIRLLQLPGDNLSYARQVFDQI 62
+++ F K VH L L D Y ++Y++F ++++ A QVF ++
Sbjct: 68 KARRFEDGKMVHKQL-DELGVEIDIYLGNSLINFYSKF---------EDVASAEQVFRRM 117
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE- 121
+ W+S+I + + H ++ + +M + + TF S+L AC S+LE
Sbjct: 118 T-LRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNY-SILEK 175
Query: 122 ---------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
A+I Y+K G + A +F M ERNV+SW+A++ A
Sbjct: 176 GRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQ 235
Query: 161 CGNMKAAKEFYDRMTE----KNSVTWV--------------------------------- 183
+ A E Y++M + N+VT+V
Sbjct: 236 HRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIV 295
Query: 184 --AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA-----KAAIEMYKVM 236
A+I Y KC V+EA+++FD +S+ D W+AM Y Q+GY ++ + M
Sbjct: 296 ANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERM 355
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
R+E V ++V + + ACT G +E + + + + + A+ +M++KCG +
Sbjct: 356 RREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSI 415
Query: 297 DLAWREFSRIKNKDVISYSS-------------------------------MITAFADHG 325
A + FS++ NK+V++++S MI +A +G
Sbjct: 416 YEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNG 475
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+ ++ M+ EG +P++VT I +L AC +E G K G++ T
Sbjct: 476 DIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLESDTVVA 534
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA-ELGEIAARHLLE-L 443
T ++ + + GQ+ +A + + D D W A+L H + E ++ R L E +
Sbjct: 535 TSLIGMYSKCGQVAEART-VFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERV 593
Query: 444 GPEKTGNSALLANIYASMGKWKDSEIVKMMISE---TEKKKSPGC 485
P + +A+++ + + EI +MM + T +K+ GC
Sbjct: 594 SPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGC 638
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 162/351 (46%), Gaps = 69/351 (19%)
Query: 82 AHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---------------------LL 120
R++I L + + G+L + T+ V+ CA+ L
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF--YDRMT--- 175
++I Y+K + A+++F M R+V++WS+M+A YA GN AK F ++RMT
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYA--GNNHPAKAFDTFERMTDAN 152
Query: 176 -EKNSVTWV-----------------------------------AMIAGYGKCGEVREAK 199
E N +T++ A+I Y KCGE+ A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+VF +++E + W A+ Q+ A E+Y+ M Q + + V V +++C
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+ + H+ E + V+NALI M+ KC + A F R+ +DVIS+S+MI
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332
Query: 320 AFADHG-KSQEALD----MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+A G K +E++D + +MR EG+ PN+VTF+ +L AC+ G +E G
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQG 383
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G + AI++ +++Q + ++ I C + E ++ K +DE + Y+
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
N+LI+ +SK + A + F R+ +DV+++SSMI A+A + +A D F +M + IE
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
PN++TF+ +L AC++ ++E G ++ + + G++ T ++ + + G++ A
Sbjct: 155 PNRITFLSILKACNNYSILEKG-RKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213
Query: 404 LIMDYKDFCDAGTWGALLGACKVH 427
+ + + +W A++ A H
Sbjct: 214 VFHKMTER-NVVSWTAIIQANAQH 236
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/478 (32%), Positives = 251/478 (52%), Gaps = 14/478 (2%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
KT LKQVH+ ++ P + A + L L+YA+ +F + L
Sbjct: 78 KTLRHLKQVHAQIITHHNSP---FQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPS-L 133
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
+ SLIR +++ LY M + G+ T+ V+ AC T
Sbjct: 134 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE---------SSVTWF 184
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYG 190
GL+ + S E + S+++ YAN ++ AAK+ ++ + ++ V+W AMI GY
Sbjct: 185 GLLVHTH-VVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYV 243
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
K E+ A+ VFD + D W M Y G A+ ++ MR V+ +E +V
Sbjct: 244 KHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVS 303
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+SAC LG ++ L ++++ + + V AL+ M++KCG + LA + F+ +++KD
Sbjct: 304 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKD 363
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
V++++++I A HG +EA +F +M+ G+EPN +TF+ +L+ACSH G+V++G K +
Sbjct: 364 VLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD 423
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
M+ +GI+P EH C++DLL R+G LE+A LI + GALLG C++H N
Sbjct: 424 CMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNF 483
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
ELGE+ + L+ L P +G LL+NIYA+ KW D+ V+ ++ K PG S I
Sbjct: 484 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVI 541
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 279/542 (51%), Gaps = 75/542 (13%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
FN Q+H++++K+ + + L+ L G + R+VFD + K WT
Sbjct: 75 FNHGLQIHAHVIKSGLEFD---RFVGNSLLTLYFKLGTDFPETRKVFDGL-FVKDVISWT 130
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-----LEAVICG- 126
S+I +V S+ L+ KM GV + FT S+V+ AC+ + L V+ G
Sbjct: 131 SMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGR 190
Query: 127 ---------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------------- 158
+ + +DDA++LFD + E + I W+++++
Sbjct: 191 GFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFF 250
Query: 159 -----------------------ANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGK 191
N G +K KE + ++ N V +++ YGK
Sbjct: 251 YSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGK 310
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG V E++++FD + ++ W+A+ Y QNG K+ I++++ M E V + +
Sbjct: 311 CGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM--EKVDLYCFGTI-- 366
Query: 252 ISACTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+ C L V + +++ +G R V +AL+ +++KCG ++ A F ++ ++
Sbjct: 367 LRTCAGLAAVRQGKEVHCQYIRKGGW-RDVIVESALVDLYAKCGCIEYAQTIFDQMPVRN 425
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+I+++SMI FA +G+ +EAL +F +M EGI+P+ ++FIG+L ACSH GLV++G + F
Sbjct: 426 LITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFI 485
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHV 428
MT+ +GIK EH +CMVDLLGR+G LE+A LI D++D D+ W ALLGAC
Sbjct: 486 SMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRD--DSSLWAALLGACTTCT 543
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N E+ E A+ ++EL P+ + LLAN+Y ++G+W D+ ++ ++ + K PG SWI
Sbjct: 544 NYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWI 603
Query: 489 SS 490
+
Sbjct: 604 ET 605
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
++G A+++ K + + V + CT++ + HV + + +
Sbjct: 36 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 95
Query: 282 VSNALIHMHSKCGYLDLAWRE-FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
V N+L+ ++ K G R+ F + KDVIS++SMI+ + GK +L++F KM
Sbjct: 96 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 155
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
G+EPN T V+ ACS G ++ G + F + G + ++D+ GR+ L+
Sbjct: 156 GVEPNAFTLSAVIKACSELGDLKLG-RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDD 214
Query: 401 AHSLIMDYKDFCDAGTWGALLGA 423
A L + + DA W +++ A
Sbjct: 215 ARQLFDELLE-PDAICWTSIISA 236
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 251/483 (51%), Gaps = 16/483 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ T +LKQ+H+ L+ + + QF+ + NL Y+ Q+ DQ K
Sbjct: 15 LIDSFITLKELKQIHTQLV--INGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAK- 71
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTS--GFTFSSVLNACARVPSLLEAV 123
T F S+IR + +S Y K+ + + S +TF+ ++ CA+ S EA
Sbjct: 72 PTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ--SACEA- 128
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
G G + +D E S ++ YA + + ++ + + + V
Sbjct: 129 --GPAVHGALIKHGFEYDPHVE------SGLIFMYAEMSCLSSCHRVFESVQKPDLVCQT 180
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
M++ KCG++ A+ +FD + + D W AM Y Q G ++ A+ ++K+M+ + V++
Sbjct: 181 TMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKV 240
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+EV+M+ ++ACT LG ++ ++++ T + AL+ M+ KCG +D A + F
Sbjct: 241 NEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVF 300
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ K+V ++S+ I A +G Q+ L++F M++EGI PN++TFI VL CS G V+
Sbjct: 301 WEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVD 360
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G F+ M R GI+P EH CMVDL GR+G+LE+A + I AG WGALL A
Sbjct: 361 EGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNA 420
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C+++ N ELGE A+R L+E+ + G L+NIYA G W V+ + K P
Sbjct: 421 CRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLP 480
Query: 484 GCS 486
GCS
Sbjct: 481 GCS 483
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 279/542 (51%), Gaps = 75/542 (13%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
FN Q+H++++K+ + + L+ L G + R+VFD + K WT
Sbjct: 134 FNHGLQIHAHVIKSGLEFD---RFVGNSLLTLYFKLGTDFPETRKVFDGL-FVKDVISWT 189
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-----LEAVICG- 126
S+I +V S+ L+ KM GV + FT S+V+ AC+ + L V+ G
Sbjct: 190 SMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGR 249
Query: 127 ---------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------------- 158
+ + +DDA++LFD + E + I W+++++
Sbjct: 250 GFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFF 309
Query: 159 -----------------------ANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGK 191
N G +K KE + ++ N V +++ YGK
Sbjct: 310 YSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGK 369
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG V E++++FD + ++ W+A+ Y QNG K+ I++++ M E V + +
Sbjct: 370 CGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM--EKVDLYCFGTI-- 425
Query: 252 ISACTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+ C L V + +++ +G R V +AL+ +++KCG ++ A F ++ ++
Sbjct: 426 LRTCAGLAAVRQGKEVHCQYIRKGGW-RDVIVESALVDLYAKCGCIEYAQTIFDQMPVRN 484
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+I+++SMI FA +G+ +EAL +F +M EGI+P+ ++FIG+L ACSH GLV++G + F
Sbjct: 485 LITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFI 544
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHV 428
MT+ +GIK EH +CMVDLLGR+G LE+A LI D++D D+ W ALLGAC
Sbjct: 545 SMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRD--DSSLWAALLGACTTCT 602
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N E+ E A+ ++EL P+ + LLAN+Y ++G+W D+ ++ ++ + K PG SWI
Sbjct: 603 NYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWI 662
Query: 489 SS 490
+
Sbjct: 663 ET 664
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
++G A+++ K + + V + CT++ + HV + + +
Sbjct: 95 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 154
Query: 282 VSNALIHMHSKCGYLDLAWRE-FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
V N+L+ ++ K G R+ F + KDVIS++SMI+ + GK +L++F KM
Sbjct: 155 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 214
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
G+EPN T V+ ACS G ++ G + F + G + ++D+ GR+ L+
Sbjct: 215 GVEPNAFTLSAVIKACSELGDLKLG-RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDD 273
Query: 401 AHSLIMDYKDFCDAGTWGALLGA 423
A L + + DA W +++ A
Sbjct: 274 ARQLFDELLE-PDAICWTSIISA 295
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 245/502 (48%), Gaps = 66/502 (13%)
Query: 48 PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL-GVLTSGFTF 106
PGD AR+VFD++P + + W +L+ + + ++ + +M G T
Sbjct: 276 PGD----ARRVFDRMP-ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTL 330
Query: 107 SSVLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAE 145
SVL ACA +L A++ Y K G +D A+++FD M +
Sbjct: 331 VSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQD 390
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMT------------------------------ 175
RN +SW+AM+ GYA G+ A + RM
Sbjct: 391 RNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRV 450
Query: 176 ---------EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
E N A+I Y KC A +VFDE+ W AM + QNG +
Sbjct: 451 HELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSS 510
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A+ ++ M+ ENV+ +V I A + D A + + D+ YV AL
Sbjct: 511 EDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTAL 570
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M++KCG + +A F+ +++ VI++++MI + HG + A+++F +M++ G PN+
Sbjct: 571 IDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNE 630
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
TF+ VL+ACSH GLV++G + F M +G++P EH MVDLLGR+G+L +A S I
Sbjct: 631 TTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQ 690
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+GA+LGACK+H N EL E +A+ + EL PE+ LLANIYA+ WKD
Sbjct: 691 KMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKD 750
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
V+ + + +K+PG S +
Sbjct: 751 VARVRTAMEKKGLQKTPGWSIV 772
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 171/371 (46%), Gaps = 58/371 (15%)
Query: 100 LTSGFTFSSVLNACARVPSLLEAVICG--YTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
L +G + L A P L A Y K DA+R+FD M R+ ++W+A+VAG
Sbjct: 241 LATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAG 300
Query: 158 YANCGNMKAAKEFYDRMTEK-----NSVTWVAMIAG------------------------ 188
YA G +AA RM E+ ++VT V+++
Sbjct: 301 YARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDE 360
Query: 189 -----------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
Y KCG V A+KVFD + + ++ W AM Y +NG A A+ ++K M
Sbjct: 361 QVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMV 420
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
E V +++V+++ A+ AC +LG ++ + + + + V NALI M+ KC D
Sbjct: 421 GEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTD 480
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
LA + F + K +S+++MI +G S++A+ +F +M+ E ++P+ T + ++ A +
Sbjct: 481 LAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALA 540
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEH-------LTCMVDLLGRSGQLEKAHSLIMDYKD 410
+ D L R + H LT ++D+ + G++ A SL +D
Sbjct: 541 D---ISD-----PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARD 592
Query: 411 FCDAGTWGALL 421
TW A++
Sbjct: 593 R-HVITWNAMI 602
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 141/288 (48%), Gaps = 4/288 (1%)
Query: 146 RNVISWSAMVAGYANCGNMKAA-KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDE 204
R S + A A+ +A + R ++ A+ Y KC +A++VFD
Sbjct: 226 RTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDR 285
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEM 263
+ D W A+ Y +NG A+AA+ M M++E+ R V +V + AC +
Sbjct: 286 MPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGA 345
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
+ G D VS A++ ++ KCG +D A + F +++++ +S+++MI +A+
Sbjct: 346 CREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAE 405
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
+G + EAL +F +M EG++ V+ + L AC G +++G + EL+ R+ G++
Sbjct: 406 NGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRI-GLESNVN 464
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
+ ++ + + + + A + + D + +W A++ C + ++E
Sbjct: 465 VMNALITMYCKCKRTDLA-AQVFDELGYKTRVSWNAMILGCTQNGSSE 511
>gi|345505226|gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 245/474 (51%), Gaps = 24/474 (5%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+H +L KT+ + Q + L + L YARQVFD++P+ + + S+I
Sbjct: 106 QIHGFLTKTVICSD----LFLQNCLIGLYIKCSCLGYARQVFDRMPQ-RDSVSYNSMIDG 160
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT-KIGLMDDA 136
+V + G++ S ++ + ++I GY + +D A
Sbjct: 161 YV----------------KCGLIESARELFDLMPKEKKNLISWNSMIGGYAQREDGVDIA 204
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
+LF M E+++ISW++++ GY G ++ AK +D M ++ VTW MI GY K G V
Sbjct: 205 SKLFAEMPEKDLISWNSLIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVH 264
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-VRISEVAMVGAISAC 255
+AK +FD + D + +M YVQN Y A+E++ M +E+ + E +V +SA
Sbjct: 265 KAKSLFDVMPHRDVVAYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAI 324
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
QLG + A + ++ E + ALI M+SKCG + A F I+NK + ++
Sbjct: 325 AQLGRLSKAVDIHLYIVEKRFLLDGKLGVALIDMYSKCGSIQQAMAVFEGIENKSIDHWN 384
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI A HG + A DM +++ I+P+ +TF+GVL ACSH GLV++G FELM R
Sbjct: 385 AMIGGLAVHGLGEAAFDMLMEIEKRFIKPDYITFVGVLNACSHSGLVKEGLLCFELMRRK 444
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE- 434
I+P +H CMVDLL RSG +E A LI + + W L AC H E E
Sbjct: 445 HKIEPRLQHYGCMVDLLARSGSIELAKHLISEMPIEPNDVIWRTFLNACSHHKEFETREL 504
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ A +L+ + LL+N+YAS W+D V+ M+ E + +K PGCSWI
Sbjct: 505 VVAENLILQAGYNPSSYVLLSNMYASFEMWEDVRRVRTMMKERKIEKVPGCSWI 558
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 251/512 (49%), Gaps = 65/512 (12%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
LI + +L A +VFD++P+ + WT +I R +I L+ M G +
Sbjct: 188 LIDMFVKGSGDLGSAYKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV 246
Query: 101 TSGFTFSSVLNAC-------------ARVPSL-LEAVIC-------GYTKI---GLMDDA 136
FT+SSVL+AC +RV L L +C Y K G +DD+
Sbjct: 247 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 306
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGN---------------------------MKAAKE 169
+++F+ M E NV+SW+A++ Y G +KA
Sbjct: 307 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 366
Query: 170 FYDRMTEKNSVTWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
D T + ++ ++I+ Y + G + +A+K FD + E + + A+
Sbjct: 367 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 426
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y +N ++ A ++ + + IS +S +G + + + +G
Sbjct: 427 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 486
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+ NALI M+S+CG ++ A++ F+ +++++VIS++SMIT FA HG + AL+MF K
Sbjct: 487 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 546
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M G +PN++T++ VL+ACSH G++ +G K F M + GI P EH CMVDLLGRSG
Sbjct: 547 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 606
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
L +A I DA W LLGAC+VH N ELG AA +LE P+ LL+N
Sbjct: 607 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 666
Query: 457 IYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
++AS G+WKD ++ + E K GCSWI
Sbjct: 667 LHASAGQWKDVVKIRKSMKERNLIKEAGCSWI 698
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 190/436 (43%), Gaps = 68/436 (15%)
Query: 41 LIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL 100
LI L GD + AR +F+ + + W++++ ++ Q+I + M LG
Sbjct: 85 LISLYSKCGDTET-ARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 143
Query: 101 TSGFTFSSVLNACARV---------------PSLLEAVICGYTKI--------GLMDDAQ 137
+ + F++V+ AC+ LEA +C ++ G + A
Sbjct: 144 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 203
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY----------DRMTEKNSVT------ 181
++FD M ERN+++W+ M+ +A G + A + + DR T + ++
Sbjct: 204 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 263
Query: 182 -----------------------WVAMIAGYGKC---GEVREAKKVFDEISEPDASCWAA 215
+++ Y KC G V +++KVF+++ E + W A
Sbjct: 264 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 323
Query: 216 MTVCYVQNGYA-KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
+ YVQ+G K AIE++ M ++R + + + AC L D + + +
Sbjct: 324 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 383
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
N V N+LI M+++ G ++ A + F + K+++SY++++ +A + KS+EA +F
Sbjct: 384 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 443
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
++ + GI + TF +L+ + G + G +Q G K ++ + R
Sbjct: 444 NEIADTGIGISAFTFASLLSGAASIGAMGKG-EQIHGRLLKGGYKSNQCICNALISMYSR 502
Query: 395 SGQLEKAHSLIMDYKD 410
G +E A + + +D
Sbjct: 503 CGNIEAAFQVFNEMED 518
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 11/247 (4%)
Query: 130 IGLMDDAQRLFDSMAERN----VISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVT 181
+G + A D M ++N + ++S ++ N + K + ++ E +SV
Sbjct: 22 VGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 81
Query: 182 WVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+I+ Y KCG+ A+ +F+ + ++ D W+AM C+ N AI + M +
Sbjct: 82 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 141
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIHMHSK-CGYLDL 298
+E I AC+ + I+ V G + V LI M K G L
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 201
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A++ F ++ +++++++ MIT FA G +++A+D+FL M G P++ T+ VL+AC+
Sbjct: 202 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 261
Query: 359 GGLVEDG 365
GL+ G
Sbjct: 262 LGLLALG 268
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 241/449 (53%), Gaps = 35/449 (7%)
Query: 54 YARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
++R VFD + + K FLW SLI + + + ++ L+ +M VL FT S++
Sbjct: 76 HSRLVFDSL-QHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTL---- 130
Query: 114 ARVPSLLEAVICGYT------KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
++V S L A+ G + +IG + D + +++++ Y CGN + +
Sbjct: 131 SKVSSELGALFSGKSIHGKSIRIGFVSDT------------VVANSIMSMYCKCGNFEES 178
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
++ +D MT +NS +W +IAGY G + ++VFD + + W AM YV+NG +
Sbjct: 179 RKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSD 238
Query: 228 AAIEMYKVMRQ-ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR---TNYVS 283
A+ +++ M+ + + + V++V + AC+ + +L+ G R N VS
Sbjct: 239 EALSLFRDMQVIDGIEPNRVSLVSVLPACSSF-----SGLLSGRQIHGFAVRKELNNEVS 293
Query: 284 --NALIHMHSKCGYLDLAWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
NALI M+SKCG LD A R F KD IS+SSMI+ + HGK QEA+ ++ KM
Sbjct: 294 LCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQA 353
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
GI P+ +T +G+L+ACS GLV +G + + +GI+P E C+VD+LGR+GQL+
Sbjct: 354 GIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDP 413
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
A I WGAL+ +H + E+ E+A R L++L PE N ++N+YAS
Sbjct: 414 ALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYAS 473
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWIS 489
+W V+ M+ + +K PGCSWIS
Sbjct: 474 SRRWDAVAEVRRMMKDKRLRKVPGCSWIS 502
>gi|308044597|ref|NP_001182884.1| uncharacterized protein LOC100501159 [Zea mays]
gi|238007964|gb|ACR35017.1| unknown [Zea mays]
Length = 580
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 242/453 (53%), Gaps = 26/453 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD +P+ + + WT++++ + + R++ ++ +M + V+ + ++ C
Sbjct: 78 ARELFDVMPE-RNDYSWTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVD-CG 135
Query: 115 RVPSLLE--------------AVICGYTKIGLMDDAQRLFDSMAER--NVISWSAMVAGY 158
++ E A+I G+ IG + +A +LF+ M R NV+SW+ MVAG
Sbjct: 136 QIQQAWELFDMMPERNSYSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGL 195
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
AN G A+EF+DRM K++ W A+I Y G++ EA+++FD + D W+ +
Sbjct: 196 ANNGLACRAREFFDRMPAKDTAAWNAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIE 255
Query: 219 CYVQNGYAKAAIEMYKVMRQENV--RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y +N A+ M+ +MR V I + + IS T VE+ I + G
Sbjct: 256 AYSKNERKHEALNMFLLMRHSAVSPNIRTLISILVISEST----VEVKQIHGLVIALGFL 311
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
T+ + NAL+ M+S+ G L AW F R++ KD I+++S++ AFADHG AL F +
Sbjct: 312 SETS-LGNALLTMYSRSGDLMSAWFAFKRLEQKDAITWTSIVQAFADHGCGYHALLGFAQ 370
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M G +P+ TF VL+AC H GLV G K F+ + V+G++P EH +C+VDLLGR+G
Sbjct: 371 MLRHGYKPSSTTFTAVLSACRHVGLVGKGRKMFKSIYHVYGLEPTIEHYSCLVDLLGRAG 430
Query: 397 QLEKAHSLIMDYKD-FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLA 455
+ +A L+ + D LLGAC VH E+ L+ P TG LLA
Sbjct: 431 YVREAKELVDGMQQGMRDEAILATLLGACVVHNEVEVAREVGEDLVRFDPSGTGGYRLLA 490
Query: 456 NIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N++AS G W ++ V ++ ++ K++PG S I
Sbjct: 491 NVFASHGMWDETANVWKVMRGSKAKRTPGFSQI 523
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 164/331 (49%), Gaps = 30/331 (9%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A++ GY K G +D A+ LFD+M +NV++W++MV+GY G ++ A+E +D M E+N +
Sbjct: 33 AMLDGYAKAGRVDRARELFDAMPVKNVVTWTSMVSGYFRAGRVQEARELFDVMPERNDYS 92
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-- 239
W ++ GY + G +REA+++FD + + + W AM YV G + A E++ +M +
Sbjct: 93 WTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMMPERNS 152
Query: 240 ---NVRISEVAMVGAISACTQLGD---------VEMAAILAKHVDEG-CCDRTNYVS--- 283
N IS +G ++ QL + V ++A + G C +
Sbjct: 153 YSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGLANNGLACRAREFFDRMP 212
Query: 284 -------NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
NA+I +++ G L+ A R F + KD++++S++I A++ + + EAL+MFL
Sbjct: 213 AKDTAAWNAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFLL 272
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
MR+ + PN T I +L VE KQ + G T ++ + RSG
Sbjct: 273 MRHSAVSPNIRTLISILVISE--STVE--VKQIHGLVIALGFLSETSLGNALLTMYSRSG 328
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
L A + DA TW +++ A H
Sbjct: 329 DLMSAW-FAFKRLEQKDAITWTSIVQAFADH 358
>gi|449446173|ref|XP_004140846.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 488
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 210/356 (58%), Gaps = 3/356 (0%)
Query: 113 CARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
C R + +I YT G + AQ+LF++M +R+ +SW+ M++GY G + A+E ++
Sbjct: 103 CVRSVEVWNRMILRYTSTGDVSGAQKLFNTMEDRDTVSWNTMISGYIKVGEVMKARELFE 162
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
+M EKN V+W +MI+ Y K G++ A+ F+++ + + W +M YVQ+G + A+++
Sbjct: 163 KMPEKNVVSWTSMISAYAKAGDLATARMFFNKMPQRNVVSWNSMISSYVQHGDFQEALDL 222
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M E + V SAC+ LG++ + + +D+ + ALI M++K
Sbjct: 223 FNQMLSEGITPDGYTFVSVFSACSHLGNLMLGTKIHYAIDD-FSQLGVIAATALIEMYAK 281
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG ++ A+ F +I KDV ++ M+ + A HG++Q+AL +F M+ +G++PN TF+G
Sbjct: 282 CGDINRAFNLFIKIGKKDVFFWNVMLKSLALHGQAQDALKLFSLMQKQGLKPNDFTFLGA 341
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L ACSHGG+VE+G F++M + + I+P EH C+VDLL R+G+LE+A ++
Sbjct: 342 LFACSHGGMVEEGQTIFDMMEKEYKIRPRIEHFGCIVDLLSRNGRLEEALDVVDKMPFEA 401
Query: 413 DAGTWGALLGACKVHVN-AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
D WGALLG CK+ + GEI R +L ++ G +N+YAS+ +W ++
Sbjct: 402 DVAIWGALLGGCKLRGDFKRAGEIVER-ARKLRSKEGGIHVSFSNMYASVEQWAEA 456
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 99/212 (46%), Gaps = 43/212 (20%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L+ AR F+++P+ + W S+I ++V H F++++ L+ +M G+ G+TF SV
Sbjct: 184 DLATARMFFNKMPQ-RNVVSWNSMISSYVQHGDFQEALDLFNQMLSEGITPDGYTFVSVF 242
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+AC+ + +L+ Y D ++ VI+ +A++ YA CG++ A
Sbjct: 243 SACSHLGNLMLGTKIHYA-----------IDDFSQLGVIAATALIEMYAKCGDINRAFNL 291
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+ ++ +K+ W M+ G+ ++A K+F
Sbjct: 292 FIKIGKKDVFFWNVMLKSLALHGQAQDALKLF---------------------------- 323
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+M+++ ++ ++ +GA+ AC+ G VE
Sbjct: 324 ---SLMQKQGLKPNDFTFLGALFACSHGGMVE 352
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 1 MTSKYLVPRSKTFNQLKQVHSYL--LKTLTKPHDQYHYYAQF-------LIRLLQLPGDN 51
M S+ + P TF + S+L L TK H ++Q LI + GD
Sbjct: 226 MLSEGITPDGYTFVSVFSACSHLGNLMLGTKIHYAIDDFSQLGVIAATALIEMYAKCGD- 284
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ A +F +I K K F W ++++ LH + ++ L++ M + G+ + FTF L
Sbjct: 285 INRAFNLFIKIGK-KDVFFWNVMLKSLALHGQAQDALKLFSLMQKQGLKPNDFTFLGALF 343
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKA 166
AC+ G++++ Q +FD M + I + +V + G ++
Sbjct: 344 ACSHG--------------GMVEEGQTIFDMMEKEYKIRPRIEHFGCIVDLLSRNGRLEE 389
Query: 167 AKEFYDRMT-EKNSVTWVAMIAGYGKCGEVREAKKVFD 203
A + D+M E + W A++ G G+ + A ++ +
Sbjct: 390 ALDVVDKMPFEADVAIWGALLGGCKLRGDFKRAGEIVE 427
>gi|326520249|dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 204/348 (58%), Gaps = 11/348 (3%)
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEP 208
I +AMV Y+ G M+ A+ +++M+ +++V+W +MIAGY + + EA +VF + E
Sbjct: 208 IMANAMVDAYSKAGRMEDARTLFNQMSIQDTVSWTSMIAGYCRAKRLDEAIRVFHMMPEQ 267
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA--- 265
D W A+ + QNG AA+++++ M E + + A+V ++ AC +LG V
Sbjct: 268 DTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSLGACAKLGLVTRGREVH 327
Query: 266 --ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
IL + + G ++ NALI M+SKCG + A F+R+ +D IS++SM+T F+
Sbjct: 328 GFILRRRI--GLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSERDFISWNSMVTGFSH 385
Query: 324 HGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
+G+ +++L MF +M + ++P VTF+ VLTACSH GLV DG + E M + G++P E
Sbjct: 386 NGQGKQSLAMFKRMLDAEVQPTYVTFLAVLTACSHAGLVTDGRRILESM-QYHGVEPRAE 444
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT---WGALLGACKVHVNAELGEIAARHL 440
H +D LGR+ QLE+A I GT WGALLGAC+VH N E+ E A L
Sbjct: 445 HYASFIDALGRNHQLEEASEFIKGLSSRIGPGTTGSWGALLGACRVHGNTEIAEKVAESL 504
Query: 441 LELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L P +G +L+NIYA+ G+W D+ ++ ++ E +K CSWI
Sbjct: 505 FQLEPGNSGRYVMLSNIYAAAGQWDDARRIRAIMKEKGLRKDQACSWI 552
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 252/502 (50%), Gaps = 71/502 (14%)
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-----HRLGVLTSGFTFS 107
S +R VFD++ + K F W +++ + + F ++ +++++ H+ FT
Sbjct: 158 SDSRMVFDKLRR-KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHK----PDNFTLP 212
Query: 108 SVLNACARVPSLL---------------------EAVICGYTKIGLMDDA-QRLFDSMAE 145
V+ ACA + L A+I Y K GL+++A +R+FD M
Sbjct: 213 CVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDT 272
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEK---------------------------- 177
+ V SW+A++ GYA + + A + Y +MT+
Sbjct: 273 KTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEI 332
Query: 178 -----------NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
+ +++++ Y CG+ A+ +FD + W M Y QNG
Sbjct: 333 HGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLP 392
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
AI +++ M + ++ E+A++ AC+QL + + L + +VS+++
Sbjct: 393 DEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSI 452
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M++K G + L+ R F R++ KDV S++ +I + HG+ +EAL++F KM G++P+
Sbjct: 453 IDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDD 512
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
TF G+L ACSH GLVEDG + F M + I+P EH TC+VD+LGR+G+++ A LI
Sbjct: 513 FTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIE 572
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ D+ W +LL +C++H N LGE A LLEL PEK N L++N++A GKW D
Sbjct: 573 EMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDD 632
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
V+ + + +K GCSWI
Sbjct: 633 VRRVRGRMKDIGLQKDAGCSWI 654
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY-KVMRQENVRI 243
+I Y CG +++ VFD++ + W A+ Y +N + A+ ++ +++ +
Sbjct: 147 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP 206
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW-RE 302
+ I AC L D+ + I+ + +V NALI M+ KCG ++ A R
Sbjct: 207 DNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRV 266
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
F + K V S+++++ +A + ++ALD++L+M + G++P+ T +L ACS
Sbjct: 267 FDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 321
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H + LK H + I + G + ++++FD++ + K W +I
Sbjct: 431 KELHCFALKA----HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLRE-KDVASWNVIIA 485
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA-------------------RVP 117
+ +H ++++ L+ KM RLG+ FTF+ +L AC+ +
Sbjct: 486 GYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIE 545
Query: 118 SLLEAVICGYT---KIGLMDDAQRLFDSM-AERNVISWSAMVAGYANCGNMKAAKEFYDR 173
LE C + G +DDA RL + M + + WS++++ GN+ ++ ++
Sbjct: 546 PKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANK 605
Query: 174 MTE------KNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASC 212
+ E +N V + AG GK +VR + +I + DA C
Sbjct: 606 LLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGC 651
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 19/185 (10%)
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA-LIHMHSKCGYLDLAWREFSR 305
AM + AC Q D+E+ L + V ++V N +I M+S CG + F +
Sbjct: 107 AMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDK 166
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVED 364
++ K++ ++++++A+ + ++A+ +F ++ + +P+ T V+ AC+ GL++
Sbjct: 167 LRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDL 224
Query: 365 GCKQF--------ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
G Q +L++ VF L + + G+ G +E+A + D D +
Sbjct: 225 GLGQIIHGMATKMDLVSDVFVGNAL-------IAMYGKCGLVEEAVKRVFDLMDTKTVSS 277
Query: 417 WGALL 421
W ALL
Sbjct: 278 WNALL 282
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 247/498 (49%), Gaps = 65/498 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC- 113
A +VFD++P+ + WT +I R +I L+ M G + FT+SSVL+AC
Sbjct: 9 AYKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 67
Query: 114 ------------ARVPSL-LEAVIC-------GYTKI---GLMDDAQRLFDSMAERNVIS 150
+RV L L +C Y K G +DD++++F+ M E NV+S
Sbjct: 68 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127
Query: 151 WSAMVAGYANCGN---------------------------MKAAKEFYDRMTEKNSVTWV 183
W+A++ YA G +KA D T + ++
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187
Query: 184 -------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++I+ Y + G + +A+K FD + E + + A+ Y +N ++ A
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++ + + IS +S +G + + + +G + NALI M+
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
S+CG ++ A++ F+ +++++VIS++SMIT FA HG + AL+MF KM G +PN++T++
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
VL+ACSH G++ +G K F M + GI P EH CMVDLLGRSG L +A I
Sbjct: 368 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
DA W LLGAC+VH N ELG AA +LE P+ LL+N++AS G+WKD +
Sbjct: 428 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 487
Query: 471 KMMISETEKKKSPGCSWI 488
+ + E K GCSWI
Sbjct: 488 RKSMKERNLIKEAGCSWI 505
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 237/479 (49%), Gaps = 60/479 (12%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL---------- 119
LW ++ + +S ++ +M G++ + FT+ S+L C V +L
Sbjct: 382 LWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQV 441
Query: 120 ------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN----CGNM 164
+C Y K G +D A + ++ E +V+SW+A+++GYA +
Sbjct: 442 IKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEAL 501
Query: 165 KAAKEFYDRMTEKNSVTWV-----------------------------------AMIAGY 189
K KE +R + +++ + A+++ Y
Sbjct: 502 KHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLY 561
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
+CG ++EA F++I D+ W + + Q+GY + A++++ M + + S
Sbjct: 562 ARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFG 621
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
A+SA + +++ + + + D VSNALI ++KCG ++ A REF + K
Sbjct: 622 SAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEK 681
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+ +S+++MIT ++ HG EA+++F KM+ G PN VTF+GVL+ACSH GLV G F
Sbjct: 682 NDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYF 741
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
E M++ G+ P H C+VDL+ R+G L +A I + DA W LL AC VH N
Sbjct: 742 ESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKN 801
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+GE AA+HLLEL PE + LL+N+YA GKW + + M+ KK PG SWI
Sbjct: 802 VEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWI 860
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 184/427 (43%), Gaps = 63/427 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD + K W ++I + + ++I L+ +MH G+ + + FSSVL+ C
Sbjct: 166 ARKVFDNLCT-KDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCT 224
Query: 115 RVP----------------SLLEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSA 153
++ S LE +C Y+++ A+++F M ++ +S+++
Sbjct: 225 KIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNS 284
Query: 154 MVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG--------------------- 188
+++G A G A E + +M + + VT ++++
Sbjct: 285 LISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAG 344
Query: 189 --------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y C +++ A ++F + W M V + + + +++
Sbjct: 345 ISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFR 404
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ + + ++ + CT +G +++ + V + YV + LI M++K G
Sbjct: 405 QMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHG 464
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
LD A + DV+S++++I+ +A H EAL F +M N GI+ + + F ++
Sbjct: 465 KLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAIS 524
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC+ + G +Q + V G +V L R G++++A+ L + D D+
Sbjct: 525 ACAGIQALNQG-RQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAY-LEFEKIDAKDS 582
Query: 415 GTWGALL 421
+W L+
Sbjct: 583 ISWNGLI 589
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 149/333 (44%), Gaps = 50/333 (15%)
Query: 121 EAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
E+V+C Y +G +D ++F+ M R+V SW +++G+ + + M
Sbjct: 44 ESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMI 103
Query: 176 EKN-SVTWVA---------------------------------------MIAGYGKCGEV 195
E+N S T ++ +I Y K G +
Sbjct: 104 EENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLI 163
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A+KVFD + D+ W AM + QNGY + AI ++ M + + +S C
Sbjct: 164 ISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGC 223
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
T++ ++ L V + YV NAL+ ++S+ A + FS++++KD +S++
Sbjct: 224 TKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFN 283
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
S+I+ A G S AL++F KM+ + ++P+ VT +L+AC+ G + CK +L + V
Sbjct: 284 SLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGAL---CKGEQLHSYV 340
Query: 376 F--GIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
GI ++DL ++ AH + +
Sbjct: 341 IKAGISSDMIVEGALLDLYVNCSDIKTAHEMFL 373
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 115/242 (47%), Gaps = 10/242 (4%)
Query: 160 NCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
N G++ K+ + ++ + SV ++ Y G++ KVF+++ W
Sbjct: 22 NSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDK 81
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT--QLGDVEMAAILAKHVDE 273
+ +++ + ++++ M +ENV +E++ + AC+ ++G I A+ +
Sbjct: 82 IISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICH 141
Query: 274 GC-CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
G C + +SN LI +++K G + A + F + KD +S+ +MI+ F+ +G +EA+
Sbjct: 142 GLLC--SPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIH 199
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F +M GI P F VL+ C+ L + G +Q + +G T +V L
Sbjct: 200 LFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVG-EQLHALVFKYGSSLETYVCNALVTLY 258
Query: 393 GR 394
R
Sbjct: 259 SR 260
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 34/245 (13%)
Query: 59 FDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
F++I K W LI + ++ ++A+M+R + S FTF S ++A A + +
Sbjct: 574 FEKI-DAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIAN 632
Query: 119 LLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
+ + A+I Y K G ++DA+R F M E+N +SW+AM+ G
Sbjct: 633 IKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITG 692
Query: 158 YANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFDEISE-----P 208
Y+ G A +++M + N VT+V +++ G V + F+ +S+ P
Sbjct: 693 YSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVP 752
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
+ +A + + G+ A K + + + +SACT +VE+ A
Sbjct: 753 KPAHYACVVDLISRAGFLSRA---RKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAA 809
Query: 269 KHVDE 273
+H+ E
Sbjct: 810 QHLLE 814
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/489 (30%), Positives = 262/489 (53%), Gaps = 22/489 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + NQLKQ H+ +LK+ H+ ++ L + +LS+A ++F I
Sbjct: 11 LLHKCINMNQLKQAHAQVLKS--GLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQH- 67
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--LLEAV 123
T ++ ++I+ +L F +I +++ + R G+ +T VL A AR+ + L E++
Sbjct: 68 PTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESI 127
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
K+G + N ++++ Y + NM++A++ +D M E ++V+W
Sbjct: 128 HACTIKLG------------SAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWT 175
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
MI GY G+V A+++FD + D W AM YVQN K + M+++M+ V
Sbjct: 176 VMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEP 235
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
E +V +SAC +G ++ + +++ T VS LI M++KCG+LDLA F
Sbjct: 236 DEAIIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLF 295
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ + +D + +++MI+ A G + A+ +F++M GI+P+ +TFI VL ACS+ G+V+
Sbjct: 296 NEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVD 355
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC----DAGTWGA 419
+G + + M+ V I+P +EH C++DLL R G+ E+A +I +A W A
Sbjct: 356 EGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRA 415
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
L AC H + E+AA L +L +G LL+N+YA++GK +D++ V+ M+
Sbjct: 416 FLSACCKHGQTQQAEVAAERLFQL-ERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGV 474
Query: 480 KKSPGCSWI 488
+K PGCS I
Sbjct: 475 EKVPGCSSI 483
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 260/486 (53%), Gaps = 18/486 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFL-IRLLQLPGDNLSYARQVFDQIPK 64
L+ + K+ +LKQ+H+ ++ D + ++ L L GD ++Y+ +VF Q+
Sbjct: 20 LLDKCKSILELKQLHAVVISCGLSQDDPF--ISKILCFSALSNSGD-INYSYRVFSQLSS 76
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI 124
T F W ++IR + + QS+ ++ KM RLGV T+ ++ A AR+ + V
Sbjct: 77 -PTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQETGVS 135
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
I ++ R + +++ YA CGN A++ +D + +KN V+W +
Sbjct: 136 VHAHIIKTGHESDRFIQN----------SLIHMYAACGNSMWAQKVFDSIQQKNVVSWNS 185
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
M+ GY KCGE+ A+K F+ +SE D W+++ YV+ G A+ +++ M+ + +
Sbjct: 186 MLDGYAKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKAN 245
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
EV MV AC +G +E ++ K++ + T + +L+ M++KCG ++ A F
Sbjct: 246 EVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFR 305
Query: 305 RIKNK--DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
R+ DV+ ++++I A HG +E+L +F +M+ GI P++VT++ +L AC+HGGLV
Sbjct: 306 RVSKSQTDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLV 365
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
++ FE +++ G+ P +EH CMVD+L R+GQL A+ I A GALL
Sbjct: 366 KEAWFFFESLSKC-GMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALLS 424
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
C H N L EI R L+EL P G L+N+YA +W D+ ++ + KKS
Sbjct: 425 GCINHRNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVKKS 484
Query: 483 PGCSWI 488
PG S++
Sbjct: 485 PGFSFV 490
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/493 (33%), Positives = 259/493 (52%), Gaps = 51/493 (10%)
Query: 13 FNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLPGD-NLSYARQVFDQI--PKCKT 67
LKQ+H+ ++KT + P A L+R + +L YAR++F + P C
Sbjct: 1 MQDLKQLHAQMIKTAQIRDP-----LAAAELLRFSAVSDHRDLDYARKIFRSMHRPNC-- 53
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSLLEA---- 122
F + +LIR ++L++ +M V + FTF SV AC R L E
Sbjct: 54 -FSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVH 112
Query: 123 -----------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
V+ Y G+M+DA RLF R V V G C ++
Sbjct: 113 GLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLF----YRRVF-----VDG---CDGIR 160
Query: 166 AAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
K R + + V W MI GY + GE+ A+ +FDE+ + W M Y Q+G+
Sbjct: 161 DKK----RRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGH 216
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
K A+E+++ M+ V + V +V + A ++LG +E+ + + + + +A
Sbjct: 217 FKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSA 276
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
LI M++KCG ++ A + F + ++V+++S++I A HG++++ LD F M G+ P+
Sbjct: 277 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 336
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
VT+IG+L+ACSH GLV +G F+ M RV G++P EH CMVDLLGR+G LE++ LI
Sbjct: 337 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 396
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
++ D W ALLGACK+H N E+G+ A HL+EL P +G+ L+NIYAS+G W+
Sbjct: 397 LNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWE 456
Query: 466 DSEIVKMMISETE 478
V++M+ E +
Sbjct: 457 GVAKVRLMMKEMD 469
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 247/498 (49%), Gaps = 65/498 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC- 113
A +VFD++P+ + WT +I R +I L+ M G + FT+SSVL+AC
Sbjct: 4 AYKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 62
Query: 114 ------------ARVPSL-LEAVIC-------GYTKI---GLMDDAQRLFDSMAERNVIS 150
+RV L L +C Y K G +DD++++F+ M E NV+S
Sbjct: 63 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122
Query: 151 WSAMVAGYANCGN---------------------------MKAAKEFYDRMTEKNSVTWV 183
W+A++ YA G +KA D T + ++
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182
Query: 184 -------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++I+ Y + G + +A+K FD + E + + A+ Y +N ++ A
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++ + + IS +S +G + + + +G + NALI M+
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
S+CG ++ A++ F+ +++++VIS++SMIT FA HG + AL+MF KM G +PN++T++
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
VL+ACSH G++ +G K F M + GI P EH CMVDLLGRSG L +A I
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
DA W LLGAC+VH N ELG AA +LE P+ LL+N++AS G+WKD +
Sbjct: 423 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 482
Query: 471 KMMISETEKKKSPGCSWI 488
+ + E K GCSWI
Sbjct: 483 RKSMKERNLIKEAGCSWI 500
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 159/498 (31%), Positives = 250/498 (50%), Gaps = 61/498 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
NL YAR++F+ +P+ T W LI +V + ++ L+ M GV TF+S L
Sbjct: 263 NLLYARKLFNTMPQTDT-VTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFL 321
Query: 111 NACA------------------RVP---SLLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ RVP L A+I Y K G ++ A+++F +V
Sbjct: 322 PSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVA 381
Query: 150 SWSAMVAGYANCG-NMKAAKEFYDRMTE---KNSVTWVAMIAG----------------- 188
+AM++GY G N+ A F + E NS+T +++
Sbjct: 382 VCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHI 441
Query: 189 ------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
Y KCG + A + F +S+ D+ CW +M + QNG + AI
Sbjct: 442 LKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAI 501
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++++ M + V++ A+SA L + + +V +V++ LI M+
Sbjct: 502 DLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMY 561
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
SKCG L LAW F+ + K+ +S++S+I A+ +HG +E LD++ +M GI P+ VTF+
Sbjct: 562 SKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFL 621
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
+++AC H GLV++G F MTR +GI EH CMVDL GR+G++ +A I
Sbjct: 622 VIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPF 681
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
DAG WG LLGAC++H N EL ++A+RHLLEL P+ +G LL+N++A G+W V
Sbjct: 682 TPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKV 741
Query: 471 KMMISETEKKKSPGCSWI 488
+ ++ E +K PG SWI
Sbjct: 742 RSLMKEKGVQKIPGYSWI 759
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 169/383 (44%), Gaps = 48/383 (12%)
Query: 44 LLQLPGDN--LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT 101
L++L DN + AR+VFD++P + LW ++R +V F +I + +M +
Sbjct: 153 LIKLYADNGYIRDARRVFDELP-LRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMV 211
Query: 102 SGFTFSSVLNACARVPSLLEAVICGYTKI-GLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
+ T++ +L+ CA C T++ GL+ + FD + +VA Y+
Sbjct: 212 NSVTYTCILSICAT-----RGNFCAGTQLHGLVIGSGFEFDPQVA------NTLVAMYSK 260
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
CGN+ A++ ++ M + ++VTW +IAGY
Sbjct: 261 CGNLLYARKLFNTMPQTDTVTWNGLIAGY------------------------------- 289
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
VQNG+ A ++ M V+ V + + + G + + ++
Sbjct: 290 VQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDV 349
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
Y+ +ALI ++ K G +++A + F + DV ++MI+ + HG + +A++ F + E
Sbjct: 350 YLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQE 409
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
G+ N +T VL AC+ ++ G K+ ++ + + + D+ + G+L+
Sbjct: 410 GMVTNSLTMASVLPACAAVAALKPG-KELHCHILKKRLENIVNVGSAITDMYAKCGRLDL 468
Query: 401 AHSLIMDYKDFCDAGTWGALLGA 423
A+ D D+ W +++ +
Sbjct: 469 AYEFFRRMSDR-DSVCWNSMISS 490
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 132/322 (40%), Gaps = 48/322 (14%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM------TEKNSV 180
Y G DA LF + R + W+ M+ G G A FY +M +K +
Sbjct: 56 YVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTF 115
Query: 181 TWV---------------------------------AMIAGYGKCGEVREAKKVFDEISE 207
+V A+I Y G +R+A++VFDE+
Sbjct: 116 PYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPL 175
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W M YV++G AI + MR ++ V +S C G+ L
Sbjct: 176 RDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQL 235
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
V + V+N L+ M+SKCG L A + F+ + D ++++ +I + +G +
Sbjct: 236 HGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFT 295
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ---FELMTRVFGIKPLTEH 384
EA +F M + G++P+ VTF L + G + CK+ + + RV P +
Sbjct: 296 DEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRH-CKEVHSYIVRHRV----PFDVY 350
Query: 385 L-TCMVDLLGRSGQLEKAHSLI 405
L + ++D+ + G +E A +
Sbjct: 351 LKSALIDVYFKGGDVEMARKIF 372
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 228/426 (53%), Gaps = 17/426 (3%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
T +TS I H H ++ L + M G+L + T S+ L AC + +
Sbjct: 352 PTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGLSP--GRALH 409
Query: 126 GYT-KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM-TEKNSVTWV 183
GY K+ L D+ +A++ YA G+ AA+ +D M + + V+
Sbjct: 410 GYAFKLALAGDSY------------VATALLGMYARAGDATAARALFDDMLPDPHVVSVT 457
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
AM+ Y G + +A+ +FD + D CW AM Y Q+G A+ +++ M V
Sbjct: 458 AMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEP 517
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
EV +V +SA QLG VE L +V + + V ALI M+ KCG L A
Sbjct: 518 DEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDV 577
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F I +KD++ +++MI +A HG S++AL+MF++ R +G+ P +TFIG+L ACSH G+V
Sbjct: 578 FHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMV 637
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E+G + F+ M R +GI P EH CMVDLLGR+G +++A L+ K DA W +LL
Sbjct: 638 EEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLA 697
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC++H N LG+ A +L+ G +G LL+NIYA++G W + V+ M+ + +K
Sbjct: 698 ACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKE 757
Query: 483 PGCSWI 488
PGCS I
Sbjct: 758 PGCSSI 763
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 208/377 (55%), Gaps = 3/377 (0%)
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+ C R L +I Y IG + A+ LFD M ER+++SW++M+ GYA G + A+
Sbjct: 125 DMCVRPVELWNQMIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVANARGL 184
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+++M EKN ++W +MI Y ++ A+ F+ + + + W +M Y ++G ++
Sbjct: 185 FEKMPEKNVISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESL 244
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-VSNALIHM 289
++ M+ E V V +SAC+ LGD+E + H G ++ V AL M
Sbjct: 245 NLFVQMQSEGVTPDGYTFVSVLSACSNLGDLEFGKYI--HYLSGDLSQSEVMVGTALTEM 302
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+++CG +D A+ F +I +DV ++ +I A A HG+S+EA+ +FL MR G++PN TF
Sbjct: 303 YAQCGDVDKAFAVFIKIGKRDVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPNDFTF 362
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
L ACSHGGLVE+G F M + + I P H C++D+L R+GQLE+A L+ D
Sbjct: 363 TSALFACSHGGLVEEGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLVEDMP 422
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D WGALLG C+V + +L E E+ ++G LL+NI+AS G+W ++
Sbjct: 423 FQPDVAIWGALLGGCRVTGDLKLAEKVVEKATEMETNESGVYVLLSNIHASAGQWIEAAD 482
Query: 470 VKMMISETEKKKSPGCS 486
+ + E + K G S
Sbjct: 483 ARKKMDEKKISKKTGSS 499
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 43/218 (19%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D+L AR F+ +P+ + W S+I ++ H F +S+ L+ +M GV G+TF SV
Sbjct: 207 DDLETARSFFETMPQ-RNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGVTPDGYTFVSV 265
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L+AC+ + L Y L +++ V+ +A+ YA C
Sbjct: 266 LSACSNLGDLEFGKYIHY-----------LSGDLSQSEVMVGTALTEMYAQC-------- 306
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
G+V +A VF +I + D CW + +G ++ A
Sbjct: 307 -----------------------GDVDKAFAVFIKIGKRDVFCWNVIIKALALHGRSEEA 343
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
I+++ +MR+ ++ ++ A+ AC+ G VE I+
Sbjct: 344 IKIFLLMRKTGLKPNDFTFTSALFACSHGGLVEEGHII 381
>gi|414873978|tpg|DAA52535.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea mays]
gi|414873979|tpg|DAA52536.1| TPA: hypothetical protein ZEAMMB73_896450 [Zea mays]
Length = 701
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 242/453 (53%), Gaps = 26/453 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++FD +P+ + + WT++++ + + R++ ++ +M + V+ + ++ C
Sbjct: 199 ARELFDVMPE-RNDYSWTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVD-CG 256
Query: 115 RVPSLLE--------------AVICGYTKIGLMDDAQRLFDSMAER--NVISWSAMVAGY 158
++ E A+I G+ IG + +A +LF+ M R NV+SW+ MVAG
Sbjct: 257 QIQQAWELFDMMPERNSYSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGL 316
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
AN G A+EF+DRM K++ W A+I Y G++ EA+++FD + D W+ +
Sbjct: 317 ANNGLACRAREFFDRMPAKDTAAWNAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIE 376
Query: 219 CYVQNGYAKAAIEMYKVMRQENV--RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
Y +N A+ M+ +MR V I + + IS T VE+ I + G
Sbjct: 377 AYSKNERKHEALNMFLLMRHSAVSPNIRTLISILVISEST----VEVKQIHGLVIALGFL 432
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
T+ + NAL+ M+S+ G L AW F R++ KD I+++S++ AFADHG AL F +
Sbjct: 433 SETS-LGNALLTMYSRSGDLMSAWFAFKRLEQKDAITWTSIVQAFADHGCGYHALLGFAQ 491
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M G +P+ TF VL+AC H GLV G K F+ + V+G++P EH +C+VDLLGR+G
Sbjct: 492 MLRHGYKPSSTTFTAVLSACRHVGLVGKGRKMFKSIYHVYGLEPTIEHYSCLVDLLGRAG 551
Query: 397 QLEKAHSLIMDYKD-FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLA 455
+ +A L+ + D LLGAC VH E+ L+ P TG LLA
Sbjct: 552 YVREAKELVDGMQQGMRDEAILATLLGACVVHNEVEVAREVGEDLVRFDPSGTGGYRLLA 611
Query: 456 NIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N++AS G W ++ V ++ ++ K++PG S I
Sbjct: 612 NVFASHGMWDETANVWKVMRGSKAKRTPGFSQI 644
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 164/331 (49%), Gaps = 30/331 (9%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
A++ GY K G +D A+ LFD+M +NV++W++MV+GY G ++ A+E +D M E+N +
Sbjct: 154 AMLDGYAKAGRVDRARELFDAMPVKNVVTWTSMVSGYFRAGRVQEARELFDVMPERNDYS 213
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-- 239
W ++ GY + G +REA+++FD + + + W AM YV G + A E++ +M +
Sbjct: 214 WTTVVQGYARNGMLREAREMFDRMPQRNVVAWTAMVKAYVDCGQIQQAWELFDMMPERNS 273
Query: 240 ---NVRISEVAMVGAISACTQLGD---------VEMAAILAKHVDEG-CCDRTNYVS--- 283
N IS +G ++ QL + V ++A + G C +
Sbjct: 274 YSWNAMISGFLSIGKVAEAVQLFERMPHRHKNVVSWTTMVAGLANNGLACRAREFFDRMP 333
Query: 284 -------NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
NA+I +++ G L+ A R F + KD++++S++I A++ + + EAL+MFL
Sbjct: 334 AKDTAAWNAIITVYANNGQLNEAQRLFDSMLAKDLVTWSTIIEAYSKNERKHEALNMFLL 393
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
MR+ + PN T I +L VE KQ + G T ++ + RSG
Sbjct: 394 MRHSAVSPNIRTLISILVISE--STVE--VKQIHGLVIALGFLSETSLGNALLTMYSRSG 449
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
L A + DA TW +++ A H
Sbjct: 450 DLMSAW-FAFKRLEQKDAITWTSIVQAFADH 479
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/500 (30%), Positives = 256/500 (51%), Gaps = 65/500 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQ+F+ + + W ++I +V + ++ L+ +M+ G+++ G +S L
Sbjct: 479 LEDARQIFEHMCD-RDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLK 537
Query: 112 ACARVPSLLE-------AVICG--------------YTKIGLMDDAQRLFDSMAERNVIS 150
AC V L + +V CG Y+K G+++DA+++F SM E +V+S
Sbjct: 538 ACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVS 597
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIA------------------- 187
+A++AGY+ N++ A + M K + +T+ ++
Sbjct: 598 MNALIAGYSQ-NNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQII 656
Query: 188 --GYGKCGE---------------VREAKKVFDEISEPDA-SCWAAMTVCYVQNGYAKAA 229
G+ GE + EA +F E+S P + W M + QNG+ + A
Sbjct: 657 KWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++ YK MR + + V + C+ L + + + D SN LI M
Sbjct: 717 LKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDM 776
Query: 290 HSKCGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
++KCG + + + F ++ + +V+S++S+I +A +G +++AL +F MR I P+++T
Sbjct: 777 YAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEIT 836
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+GVLTACSH G V DG K FE+M +GI+ +H+ CMVDLLGR G L++A I
Sbjct: 837 FLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQ 896
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
DA W +LLGAC++H + GEIAA L+EL P+ + LL+NIYAS G+W+++
Sbjct: 897 NLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEAN 956
Query: 469 IVKMMISETEKKKSPGCSWI 488
++ + + KK PG SWI
Sbjct: 957 ALRKAMRDRGVKKVPGYSWI 976
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 169/395 (42%), Gaps = 55/395 (13%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D L A++VFD I T WT L +V ++++++ +M G F +V
Sbjct: 209 DRLGDAQRVFDGIVDPNT-VCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV 267
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG------- 162
+N Y +G + DA+ LF M +V++W+ M++G+ G
Sbjct: 268 INT--------------YISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIE 313
Query: 163 ---NMKAAKEFYDRMTEKNSVTWVAMIAG-----------------------------YG 190
NM+ + R T + ++ + ++A Y
Sbjct: 314 YFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
KC ++ A KVF+ + E + W AM Y NG + +E++ M+ I +
Sbjct: 374 KCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+S C D+EM + + + + +V NAL+ M++KCG L+ A + F + ++D
Sbjct: 434 LLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRD 493
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+S++++I + EA D+F++M + GI + L AC++ + G KQ
Sbjct: 494 NVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQG-KQVH 552
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
++ G+ + + ++D+ + G +E A +
Sbjct: 553 CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVF 587
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 160/366 (43%), Gaps = 64/366 (17%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR +F ++P W +I H +I + M + V ++ T SVL+
Sbjct: 277 LKDARLLFGEMPSPDV-VAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLS 335
Query: 112 ACARVPSL-------LEAVICG--------------YTKIGLMDDAQRLFDSMAERNVIS 150
A V +L EA+ G Y+K M+ A ++F+++ ERN +
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVL 395
Query: 151 WSAMVAGYANCG----------NMKAAKEFYDRMT------------------------- 175
W+AM+ GYA+ G +MK++ D T
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIII 455
Query: 176 ----EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
KN A++ Y KCG + +A+++F+ + + D W + YVQ+ A +
Sbjct: 456 KKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFD 515
Query: 232 MYKVMRQENVRISEVAMVGAISACTQL-GDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++ M + + + ACT + G + + V G DR + ++LI M+
Sbjct: 516 LFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCG-LDRVLHTGSSLIDMY 574
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
SKCG ++ A + FS + V+S +++I ++ + +EA+ +F +M +G+ P+++TF
Sbjct: 575 SKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFA 633
Query: 351 GVLTAC 356
++ AC
Sbjct: 634 TIVEAC 639
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 213/523 (40%), Gaps = 120/523 (22%)
Query: 6 LVPRSKTFNQL-KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPK 64
LV R + +L ++V+ ++L HDQ H Q L+ + L L +R+VFD++P
Sbjct: 19 LVRRLSSSTELGRRVYGHVLPN----HDQIH---QGLLEIC-LEQCKLFKSRKVFDEMP- 69
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN---ACARVP---- 117
H L R +++K LG+ + G +++++ CA+V
Sbjct: 70 -------------HRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 118 ---------SLLEAVICGYTKIGLMDDAQRLFDSMAER----NVISWSAMVAGYANCGNM 164
+ +++ Y+ IG R F S+ E N ++S +++ A N+
Sbjct: 117 QFNSLEKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNV 176
Query: 165 KAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
+ ++ + M E+NS A++ Y KC + +A++VFD I +P+ CW + Y
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGY 236
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
V+ G + A+ +++ MR E R +A V I+ LG ++ A +L
Sbjct: 237 VKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLL------------- 283
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
F + + DV++++ MI+ G A++ FL MR
Sbjct: 284 ----------------------FGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKS 321
Query: 341 GIEPNQVTFIGVLTACS-----------HGGLVEDG-----------------CKQFELM 372
++ + T VL+A H ++ G C++ E
Sbjct: 322 SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 373 TRVF-GIKPLTEHL-TCMVDLLGRSGQLEKAHSLIMDYKDF---CDAGTWGALLGACKVH 427
+VF ++ + L M+ +G+ K L MD K D T+ +LL C V
Sbjct: 382 AKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVS 441
Query: 428 VNAELGEIAARHLLELGPEKTGN---SALLANIYASMGKWKDS 467
+ E+G + H + + + T N L ++YA G +D+
Sbjct: 442 HDLEMG--SQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDA 482
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
D + NA++ +++KC + A ++F+ ++ KDV +++SM++ ++ G+ + L F+
Sbjct: 92 DSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSMYSSIGQPGKVLRSFVS 150
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG--- 393
+ I PN+ TF VL+ + VE G +Q G++ + +VD+
Sbjct: 151 LFENLIFPNKFTFSIVLSTSARETNVEFG-RQIHCSMIKMGLERNSYCGGALVDMYAKCD 209
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL 453
R G ++ I+D C W L +V A L E A + E L
Sbjct: 210 RLGDAQRVFDGIVDPNTVC----WTCLFSG---YVKAGLPEEAVIVFERMRGEGHRPDHL 262
Query: 454 ----LANIYASMGKWKDSEIV 470
+ N Y S+GK KD+ ++
Sbjct: 263 AFVTVINTYISLGKLKDARLL 283
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 98/242 (40%), Gaps = 31/242 (12%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
+ + + +HS + HD + LI + GD + + QVFD++ + W
Sbjct: 747 SLREGRAIHSLIFHL---AHDLDELTSNTLIDMYAKCGD-MKSSSQVFDEMRRRSNVVSW 802
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
SLI + + + ++ ++ M + ++ TF VL AC+ G
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA--------------G 848
Query: 132 LMDDAQRLFDSM-----AERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK-NSVTWVAM 185
+ D +++F+ M E V + MV G ++ A +F + K ++ W ++
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSL 908
Query: 186 -----IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
I G GE+ + + E+ ++S + ++ Y G + A + K MR
Sbjct: 909 LGACRIHGDDMRGEIAAERLI--ELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRG 966
Query: 241 VR 242
V+
Sbjct: 967 VK 968
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 250/450 (55%), Gaps = 20/450 (4%)
Query: 47 LPGDNLSYARQVFDQIPKC---KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG 103
L N+ A+++F Q+ + + + W +I HV + F +++L+ + G+
Sbjct: 347 LENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDS 406
Query: 104 FTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
FT S+L A + + + +I + + L + N A+V Y C +
Sbjct: 407 FTLGSILTGFADMTCIRQG-----KEIHSIAIVKGL-----QSNSFVGGALVEMYCKCND 456
Query: 164 MKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASCWAAMTVC 219
+ AA+ +D ++E+++ TW A+I+GY +C ++ + +++ + + EP+ W ++
Sbjct: 457 IIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAG 516
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI-SACTQLGDVEMAAILAKHVDEGCCDR 278
V+N A++++ M+ ++R ++ VG I +AC++L + + + D
Sbjct: 517 LVENKQYDLAMQLFNEMQVSSLR-PDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDS 575
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
++ L+ M++KCG + ++ +++I N +++ +++M+TA+A HG +E + +F +M
Sbjct: 576 DAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRML 635
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
+ + P+ VTF+ VL++C H G ++ G + F LM + I P +H TCMVDLL R+G+L
Sbjct: 636 DSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKL 694
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
++A+ LI + D+ TW ALLG C +H LGEIAA L+EL P TGN LLAN+Y
Sbjct: 695 DEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLY 754
Query: 459 ASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
AS G+W D + ++++ +KSPGCSWI
Sbjct: 755 ASAGRWHDLAKTRELMNDKGMQKSPGCSWI 784
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 182/389 (46%), Gaps = 30/389 (7%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSY--ARQVF 59
T ++ S + KQ+HS+ +KT H+ + Q +LLQ+ N S+ A +F
Sbjct: 36 TYSTILQSSNSLTLGKQLHSHSIKTGFYNHN----FVQ--TKLLQMYSINSSFEDAWHMF 89
Query: 60 DQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM--HRLGVLTSGFTFSSVLNACARVP 117
D++ K WT+++R H+ F + +L+ + LG F F VLN C
Sbjct: 90 DKM-TLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNIC---- 144
Query: 118 SLLEAVICGYTKIGLMDDAQRL-FDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
CG + L + NV +A++ Y CG++ AK+ + MT+
Sbjct: 145 -------CGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQ 197
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASCWAAMTVCYVQNGYAKAAIEM 232
K+ V+W ++I G V EA + + + EP+ W+A+ + N Y ++E+
Sbjct: 198 KDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVEL 257
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M V + + AC+++ + + L ++ +V+NAL+ M+ +
Sbjct: 258 FARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRR 317
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG + A++ FS+ K SY++MI + ++G +A ++F +M EG+E +++++ +
Sbjct: 318 CGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCM 377
Query: 353 LTACSHGGLVEDGCKQF-ELMTRVFGIKP 380
++ + +D F +L+ GI+P
Sbjct: 378 ISGHVDNFMFDDALMLFRDLLME--GIEP 404
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 6/239 (2%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV--RISEV 246
Y +A +FD+++ + W A+ ++ G +++ + + ++
Sbjct: 76 YSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFF 135
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
++ C LGD+E+ + V + YV NALI M+ KCG LD A + +
Sbjct: 136 VFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGM 195
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
KD +S++S+ITA +G EALD+ M +EPN VT+ V+ S +
Sbjct: 196 TQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESV 255
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL---EKAHSLIMDYKDFCDAGTWGALLG 422
+ F M G+ P L ++ R L ++ H I+ ++ F + AL+G
Sbjct: 256 ELFARMVGA-GVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVG 313
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/315 (38%), Positives = 196/315 (62%), Gaps = 2/315 (0%)
Query: 176 EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC--WAAMTVCYVQNGYAKAAIEMY 233
+ N+V +++ Y KC + +A +VF+E++E DA+ W A+ Y + G A+E +
Sbjct: 194 KSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFF 253
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M+ + E+++V + C QLG +E+ + + D+ R V NALI M++KC
Sbjct: 254 RRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKC 313
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G +D R F ++K +DVIS+S+MI A+HG+++EA+++F +M+ IEP+ +TF+G+L
Sbjct: 314 GSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLL 373
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
TAC+H GL+ +G + FE M R + I+P EH C+V+LLG SG+L++A L+ D
Sbjct: 374 TACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPD 433
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
+ WG+LL +C+ H N ++ IA HLLEL P TGN LL+N+YA +GKW ++ +
Sbjct: 434 SPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKL 493
Query: 474 ISETEKKKSPGCSWI 488
+ KK+PGCS I
Sbjct: 494 MRSKSMKKTPGCSSI 508
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 47/320 (14%)
Query: 50 DNLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
D+L A +VF+++ + T F WT+++ + + ++ + +M +G+ + S
Sbjct: 211 DSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVS 270
Query: 109 VLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERN 147
VL CA++ +L A+I Y K G +D +RLFD M ER+
Sbjct: 271 VLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERD 330
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFD 203
VISWS M+ G AN G + A E + M E + +T+V ++ G + E + F+
Sbjct: 331 VISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFE 390
Query: 204 EIS-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQ 257
+ EP + + +G A+E+ K M R + + G+ +S+C
Sbjct: 391 SMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMP----RKPDSPIWGSLLSSCRS 446
Query: 258 LGDVEMAAILAKHVDE-GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV----- 311
G++++A I +H+ E D NYV L ++++ G D R +++K +
Sbjct: 447 HGNLKIAVIAMEHLLELEPADTGNYV--LLSNLYADLGKWDGVSRMRKLMRSKSMKKTPG 504
Query: 312 ---ISYSSMITAFADHGKSQ 328
I +M+ FA S+
Sbjct: 505 CSSIEVDNMVQEFASGDDSK 524
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 160 NCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
+C N+ K+ + + + ++S M+ GE A +F +++P+A + A
Sbjct: 68 DCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNA 127
Query: 216 MTVCYVQNGYAKAAIEMYKVMR-----QENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
M Y N AI +YK M + + + + +C L ++ + H
Sbjct: 128 MIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGH 187
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD--VISYSSMITAFADHGKSQ 328
V + V N+L+ M+ KC LD A R F + +D + S++++++ +A G
Sbjct: 188 VFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYA 247
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+AL+ F +M+ GIEP++++ + VL C+ G +E G
Sbjct: 248 DALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELG 284
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/483 (31%), Positives = 244/483 (50%), Gaps = 71/483 (14%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV-ICGYT- 128
W S++ V + + +++ Y +M G S++ A AR + L + I Y
Sbjct: 387 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAM 446
Query: 129 KIGLMDDAQR-------------------LFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
K GL D Q +FD M +++V+SW+ ++AG+A G+ A E
Sbjct: 447 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALE 506
Query: 170 FYDRMTEKNSVTWVAMIAG--------------------------------------YGK 191
+ + + V MI+ YG+
Sbjct: 507 LFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGE 566
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG V A ++F+ I D W +M CYV NG A A+E++ +M++ V +++V
Sbjct: 567 CGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 626
Query: 252 ISACTQLG------DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+SA L ++ I V EG +++ L+ M+++CG L+ + F+
Sbjct: 627 LSAAASLSALKKGKEIHGFLIRKGFVLEGS------LASTLVDMYARCGTLEKSRNVFNF 680
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
I+NKD++ ++SMI A+ HG + A+D+F +M +E I P+ + F+ VL ACSH GL+ +G
Sbjct: 681 IRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEG 740
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ E M + ++P EH C+VDLLGR+ LE+A+ + + A W ALLGAC+
Sbjct: 741 RRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQ 800
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
+H N ELGEIAA+ LLE+ PE GN L++N+YA+ +WKD E V+M + + KK+PGC
Sbjct: 801 IHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGC 860
Query: 486 SWI 488
SWI
Sbjct: 861 SWI 863
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 221/484 (45%), Gaps = 81/484 (16%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFL-IRLLQLPGDN--LSYARQVFDQIPKCKT 67
K ++ +QVH++++ + + + FL RL+ + G L A ++FD +P KT
Sbjct: 128 KALSEGQQVHAHMITS------NALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPH-KT 180
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--------- 118
F W ++I +V + S+ LY +M G+ TF +L AC +
Sbjct: 181 IFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHG 240
Query: 119 ------------LLEAVICGYTKIGLMDDAQRLFDSMAER-NVISWSAMVAGYANCGNMK 165
+ +++ YTK ++ A++LFD M E+ +V+SW++M++ Y++ G
Sbjct: 241 LAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSI 300
Query: 166 AAKEFYDRMTE----KNSVTWVA-----------------------------------MI 186
A + M + N+ T+VA +I
Sbjct: 301 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 360
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
A Y + G++ EA +F + + D W +M +VQNG A++ Y MR + V
Sbjct: 361 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 420
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK-CG--YLDLAWREF 303
A++ I+A + G+ + + + D V N+L+ M++K C Y+D F
Sbjct: 421 AVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI---F 477
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
++ +KDV+S++++I A +G AL++F +++ EGI+ + + +L ACS L+
Sbjct: 478 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLIS 537
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ + R G+ L +VD+ G G ++ A + + + +F D +W +++ +
Sbjct: 538 SVKEIHSYIIRK-GLSDLVLQ-NGIVDVYGECGNVDYA-ARMFELIEFKDVVSWTSMI-S 593
Query: 424 CKVH 427
C VH
Sbjct: 594 CYVH 597
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 161/321 (50%), Gaps = 26/321 (8%)
Query: 117 PSLLEAVICGYTKIGLMDDA-QRLFDSMAERNVISWSAMVAGYAN----CGNMKA---AK 168
PSL E IC K G +++A Q L D A ++ +S + Y++ CG+ KA +
Sbjct: 81 PSLRE--IC---KRGSVNEAFQSLTDLFANQSPSQFS-LDEAYSSVLELCGSKKALSEGQ 134
Query: 169 EFYDRMTEKNSV-----TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+ + M N++ ++ YGKCG + +A+K+FD + W AM YV N
Sbjct: 135 QVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTN 194
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA-ILAKHVDEGCCDRTNYV 282
G ++E+Y+ MR + + + AC L D A + + EG +V
Sbjct: 195 GEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIV-FV 253
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
+N+++ M++KC L+ A + F R+ K DV+S++SMI+A++ +G+S EAL +F +M+
Sbjct: 254 ANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS 313
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGC-KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
+ PN TF+ L AC ++ G ++ + I + ++ + R G++ +
Sbjct: 314 LAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGE 371
Query: 401 AHSLIMDYKDFCDAGTWGALL 421
A ++ + D+ D +W ++L
Sbjct: 372 AANIFYNMDDW-DTISWNSML 391
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 127/306 (41%), Gaps = 74/306 (24%)
Query: 18 QVHSYLLKT-----LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
Q+H+Y +K L + YA+F ++ Y +FD++P K WT
Sbjct: 440 QIHAYAMKNGLDSDLQVGNSLVDMYAKFC---------SMKYMDCIFDKMPD-KDVVSWT 489
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP--------------- 117
++I H + +++ L+ ++ G+ SS+L AC+ +
Sbjct: 490 TIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRK 549
Query: 118 -----SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
L ++ Y + G +D A R+F+ + ++V+SW++M++ Y + G A E +
Sbjct: 550 GLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 609
Query: 173 RM----TEKNSVTWVA-----------------------------------MIAGYGKCG 193
M E +S++ V+ ++ Y +CG
Sbjct: 610 LMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCG 669
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
+ +++ VF+ I D W +M Y +G +AAI++++ M E++ +A V +
Sbjct: 670 TLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLY 729
Query: 254 ACTQLG 259
AC+ G
Sbjct: 730 ACSHSG 735
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 125/294 (42%), Gaps = 41/294 (13%)
Query: 11 KTFNQLKQVHSYLLKT----LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
K + +K++HSY+++ L + Y + N+ YA ++F+ I + K
Sbjct: 534 KLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGE---------CGNVDYAARMFELI-EFK 583
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP--------- 117
WTS+I +V + +++ L+ M GV + S+L+A A +
Sbjct: 584 DVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIH 643
Query: 118 ------------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
SL ++ Y + G ++ ++ +F+ + ++++ W++M+ Y G +
Sbjct: 644 GFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGR 703
Query: 166 AAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCY 220
AA + + RM ++ + + +VA++ G + E ++ + + E W VC
Sbjct: 704 AAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCL 763
Query: 221 VQ-NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
V G A E Y+ ++ V + + AC + E+ I A+ + E
Sbjct: 764 VDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLE 817
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 245/494 (49%), Gaps = 62/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD +P+ T LW ++I +++F SI ++ M +G+ T ++VL A A
Sbjct: 167 ARKVFDVMPERDT-VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVA 225
Query: 115 RVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L +I Y+K G + LFD + + ++IS++A
Sbjct: 226 ELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNA 285
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMI----------------------- 186
M++GY ++A + + NS T V +I
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 187 ------------AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y + EV+ A+++FDE E + W AM Y QNG AI +++
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M + + + V + +SAC QLG + + + + + YVS AL+ M++KCG
Sbjct: 406 EMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCG 464
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A + F + +K+V+++++MIT + HG +EAL +F +M GI P VTF+ +L
Sbjct: 465 SIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILY 524
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV +G + F M +G +P++EH CMVD+LGR+GQL A I
Sbjct: 525 ACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGP 584
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
WGALLGAC +H N E+ +A++ L +L PE G LL+NIY++ + + V+ ++
Sbjct: 585 AVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVV 644
Query: 475 SETEKKKSPGCSWI 488
+ + K+PGC+ I
Sbjct: 645 KKRKLAKTPGCTLI 658
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 12/156 (7%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + +ARQ+FD+ P+ K+ W ++I + + ++I L+ +M + + T +S+
Sbjct: 364 NEVQFARQLFDESPE-KSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSI 421
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L+ACA+ L A+ G GL+ ++RL E NV +A+V YA CG++ A++
Sbjct: 422 LSACAQ----LGALSIGKWVHGLIK-SERL-----ESNVYVSTALVDMYAKCGSIVEARQ 471
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+D M +KN VTW AMI GYG G +EA K+F E+
Sbjct: 472 LFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEM 507
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 149/349 (42%), Gaps = 47/349 (13%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + T +QL Q+ + L+ L H + + L +++ RQ+F+++ K
Sbjct: 20 LLNNATTLSQLLQIQAQLI--LHGIHYDLSSITKLTHKFFDLGA--VAHVRQLFNKVSKP 75
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHR-LGVLTSGFTFSSVLNACARVPSLLEAVI 124
FL+ LIR + + SI LY + + + FT++ ++A +R+
Sbjct: 76 DL-FLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLED------ 128
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
++G++ A + D +A N+ SA+V Y + A++ +D M E+++V W
Sbjct: 129 ---ERVGVLLHAHSIVDGVAS-NLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNT 184
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
MI+G+ + N Y + +I ++ M +
Sbjct: 185 MISGFSR-------------------------------NSYFEDSIRVFVDMLDVGLSFD 213
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ ++A +L + + + + YV LI ++SKCG F
Sbjct: 214 STTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFD 273
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
+I D+ISY++MI+ + + +++ A+ +F ++ G N T +G++
Sbjct: 274 QIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 254/514 (49%), Gaps = 40/514 (7%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + K+ QLKQ+HS+ +K + + + N++YA QVFD IP
Sbjct: 13 LLEKCKSMYQLKQIHSHTIKMGLSSDPLFR--NRVIAFCCAHESGNMNYAHQVFDTIPH- 69
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL----- 120
+ F+W ++I+ + +H + +Y M + FTF L R +L
Sbjct: 70 PSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKEL 129
Query: 121 ----------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
+A I ++ G++D A ++FD V++W+ M++GY
Sbjct: 130 LNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQF 189
Query: 165 KAAKEFY--DRMTEKNSVTWVAMIAGY----------GKCGEVREAKKVFDEISEPDASC 212
K +K ++ + W I Y CGE+ EA+ VFD + D
Sbjct: 190 KISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTRDVVS 249
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
W AM Y++ + A+ +++ M+ NV+ E MV + AC LG +E+ + +D
Sbjct: 250 WTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCID 309
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+ ++V NAL+ M+ KCG + A + F + KD ++++MI A +G +EAL
Sbjct: 310 KNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALA 369
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
MF M + P+++T+IGVL AC +V+ G F MT GIKP H CMVDLL
Sbjct: 370 MFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLL 425
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
G G LE+A +I++ ++ WG+ LGAC+VH N +L ++AA+ +LEL PE
Sbjct: 426 GCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENGAVYV 485
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
LL NIYA+ KW++ V+ ++ E KK+PGCS
Sbjct: 486 LLCNIYAASKKWENLCQVRKLMMERGIKKTPGCS 519
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 246/492 (50%), Gaps = 62/492 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL----PGDNLSYARQVFDQ 61
L+ + +L+++H++++ + H++ +LL +L+YA+ +F Q
Sbjct: 10 LLQGCNSLKRLRKIHAHVIVS------GLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQ 63
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSVLNACARVPSLL 120
+ +C W S+IR + +I+ Y +M + FTFS VL AC R+
Sbjct: 64 M-ECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIK--- 119
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNV--ISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
AER + S + GY + +
Sbjct: 120 -----------------------AERKCKEVHGSVIRCGY-----------------DAD 139
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
+ ++ Y G V A++VFD++ D W AM C+ Q G + A++ Y MR
Sbjct: 140 VIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRS 199
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
ENV I +VG IS+C LG + + + + E D++ YV NALI M++KCG LD
Sbjct: 200 ENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQ 259
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A F R++ KD+ +++SMI + HG+ EA+ F +M I+PN VTF+G+L CSH
Sbjct: 260 AILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSH 319
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GLV++G K F LM+ F +KP +H C+VDL GR+G+L+KA ++ + D+ W
Sbjct: 320 QGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSN-SSHNDSVLWR 378
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM--MISE 476
LLG+CK+H N +GEIA L ELG G+ LLA IYA G+ + + +M MI
Sbjct: 379 ILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYA--GEKDKAGVARMRKMIKS 436
Query: 477 TEKKKSPGCSWI 488
KK +PG SWI
Sbjct: 437 QGKKTTPGWSWI 448
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 245/494 (49%), Gaps = 62/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD +P+ T LW ++I +++F SI ++ M +G+ T ++VL A A
Sbjct: 167 ARKVFDVMPERDT-VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVA 225
Query: 115 RVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L +I Y+K G + LFD + + ++IS++A
Sbjct: 226 ELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNA 285
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMI----------------------- 186
M++GY ++A + + NS T V +I
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345
Query: 187 ------------AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y + EV+ A+++FDE E + W AM Y QNG AI +++
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQ 405
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M + + + V + +SAC QLG + + + + + YVS AL+ M++KCG
Sbjct: 406 EMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCG 464
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A + F + +K+V+++++MIT + HG +EAL +F +M GI P VTF+ +L
Sbjct: 465 SIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILY 524
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV +G + F M +G +P++EH CMVD+LGR+GQL A I
Sbjct: 525 ACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGP 584
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
WGALLGAC +H N E+ +A++ L +L PE G LL+NIY++ + + V+ ++
Sbjct: 585 AVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVV 644
Query: 475 SETEKKKSPGCSWI 488
+ + K+PGC+ I
Sbjct: 645 KKRKLAKTPGCTLI 658
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 149/349 (42%), Gaps = 47/349 (13%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + T +QL Q+ + L+ L H + + L +++ RQ+F+++ K
Sbjct: 20 LLNNATTLSQLLQIQAQLI--LHGIHYDLSSITKLTHKFFDLGA--VAHVRQLFNKVSKP 75
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL-TSGFTFSSVLNACARVPSLLEAVI 124
FL+ LIR + + SI LY + + L FT++ ++A +R+
Sbjct: 76 DL-FLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLED------ 128
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
++G++ A + D +A N+ SA+V Y + A++ +D M E+++V W
Sbjct: 129 ---ERVGVLLHAHSIVDGVAS-NLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNT 184
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
MI+G+ + N Y + +I ++ M +
Sbjct: 185 MISGFSR-------------------------------NSYFEDSIRVFVDMLDVGLSFD 213
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ ++A +L + + + + YV LI ++SKCG F
Sbjct: 214 STTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFD 273
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
+I D+ISY++MI+ + + +++ A+ +F ++ G N T +G++
Sbjct: 274 QIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 12/156 (7%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + +ARQ+FD+ P+ K+ W ++I + + ++I L+ +M + + T +S+
Sbjct: 364 NEVQFARQLFDESPE-KSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVTSI 421
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L+ACA+ L A+ G GL+ ++RL E NV +A+V YA CG++ A++
Sbjct: 422 LSACAQ----LGALSIGKWVHGLIK-SERL-----ESNVYVSTALVDMYAKCGSIVEARQ 471
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+D M +KN VTW AMI GYG G +EA K+F E+
Sbjct: 472 LFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEM 507
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 236/439 (53%), Gaps = 11/439 (2%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + ARQ+FD++ + ++ WT+++ +V ++ +S+ L+ +M V+ +V
Sbjct: 316 NKIDKARQLFDKMNE-RSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTV 374
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L+AC LE G + + L D +A++ YA CG + A
Sbjct: 375 LSACVH----LEDFDLGRSVHAFIVTYGMLVDGFLG------NALLDLYAKCGKLDEALR 424
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
++++ K++ +W +M+ G+ + G V +A+ F++I E D W M YV++ +
Sbjct: 425 TFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNES 484
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
E++ M+ NV+ + ++ +S+C ++G + + ++++ + ALI M
Sbjct: 485 FEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDM 544
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KCG +++A+ F++I K+V +++M+ A+A G++ EA+D++L+M G++P+ VTF
Sbjct: 545 YGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTF 604
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
I +L ACSHGGLV++G K F + + I P H CMVDLLGR G LE+ I
Sbjct: 605 IALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMP 664
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D W +L+ AC+ H N EL E A + L+E+ P G LL+NIYA G+W D
Sbjct: 665 IEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSK 724
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ + ET K PG + I
Sbjct: 725 VRTKLHETGVPKQPGFTMI 743
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 187/387 (48%), Gaps = 47/387 (12%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
W ++I +VL +R+++ L+ +M GVL T S+++ CA++ L + +
Sbjct: 202 WNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDL---EMGKRLHL 258
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM--TEKNSVTWVAMIAG 188
++D+ + S+ + +V Y+ CG M A R +E + V W +++G
Sbjct: 259 YIVDNKLWIRGSLL-------NCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSG 311
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y K ++ +A+++FD+++E W M YVQ GY ++E+++ MR ENV EVA+
Sbjct: 312 YVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVAL 371
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE------ 302
V +SAC L D ++ + + ++ NAL+ +++KCG LD A R
Sbjct: 372 VTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPC 431
Query: 303 -------------------------FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
F++I KD++S+++M+ A+ H E+ ++F KM
Sbjct: 432 KSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKM 491
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGC-KQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
++ ++P++ T I +L++C+ G + G + GI + T ++D+ G+ G
Sbjct: 492 QSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLG--TALIDMYGKCG 549
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGA 423
+E A+ + + + W A++ A
Sbjct: 550 CVEMAYEIFTQIIEK-NVFVWTAMMAA 575
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 119/524 (22%), Positives = 212/524 (40%), Gaps = 94/524 (17%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + +H++L+ T HD +Q L LL + +NL A Q+ +
Sbjct: 41 LLKSCSNIREFSPIHAHLI-TANLIHDP-EITSQVLAFLLSV--NNLDCAHQILSYSHEP 96
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
++ +W +L+ N + ++ + Y M GVL TF +++AC C
Sbjct: 97 ES-IIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHAC-----------C 144
Query: 126 GYTKIGLMDDAQ-RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
+ L + R+ RN + ++ Y+ CG +K + +++MT ++ ++W
Sbjct: 145 KNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNT 204
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
MI+ Y G REA +FDE M V
Sbjct: 205 MISCYVLKGMYREALDLFDE-------------------------------MLVSGVLPD 233
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA----- 299
E+ MV +S C +L D+EM L ++ + + N L+ M+SKCG +D A
Sbjct: 234 EITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLS 293
Query: 300 -----------W-----------------REFSRIKNKDVISYSSMITAFADHGKSQEAL 331
W + F ++ + ++S+++M++ + G E+L
Sbjct: 294 RCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESL 353
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
++F +MR E + P++V + VL+AC H + G + +G+ ++DL
Sbjct: 354 ELFQQMRFENVIPDEVALVTVLSACVHLEDFDLG-RSVHAFIVTYGMLVDGFLGNALLDL 412
Query: 392 LGRSGQLEKAHSLIMDYKDFC-DAGTWGALL-GACKVHVNAELGEIAARHLLELGPEKTG 449
+ G+L++A C A +W ++L G C+ G AR PEK
Sbjct: 413 YAKCGKLDEALRTFEQLP--CKSAASWNSMLDGFCR-----SGGVDKARDFFNKIPEKDI 465
Query: 450 NS-ALLANIYASMGKWKDS-EIV-KMMISETEKKKSPGCSWISS 490
S + N Y + +S EI KM S + K+ S +SS
Sbjct: 466 VSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSS 509
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 233/424 (54%), Gaps = 19/424 (4%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYT-- 128
WTS I H + ++ +++M GV + TF ++L+AC P LE + G +
Sbjct: 57 WTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFP--LEGLRFGGSIH 114
Query: 129 ----KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
K+GL D + NV+ +A+V Y+ CG + A +D M +NSV+W
Sbjct: 115 AYVRKLGL--DTE---------NVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNT 163
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
MI G + GEV EA +FD++SE DA W +M +V+ G + A+E ++ M+ V
Sbjct: 164 MIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPD 223
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
V ++ ++AC LG + + + + V + +SN+LI M+S+CG + LA + F
Sbjct: 224 YVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFE 283
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
++ + ++S++SMI FA +G ++EAL+ F MR EG P+ V+F G LTACSH GLV++
Sbjct: 284 QMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDE 343
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G + F++M R I P EH C+VDL R+G+LE A ++I + + G+LL AC
Sbjct: 344 GLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAAC 403
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
+ H + L E ++L E+ P N LL+NIYA++G+W + V+ + K PG
Sbjct: 404 RTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPG 463
Query: 485 CSWI 488
S I
Sbjct: 464 FSSI 467
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
ARQVF+Q+PK ++ W S+I L+ H +++ + M + G G +F+ L AC+
Sbjct: 278 ARQVFEQMPK-RSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACS 336
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKE 169
GL+D+ + FD M IS + +V Y+ G ++ A
Sbjct: 337 HS--------------GLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALN 382
Query: 170 FYDRMTEK-NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA---SCWAAMTVCYVQNGY 225
M K N V +++A G+V A+++ + E D S + ++ Y G
Sbjct: 383 VIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGR 442
Query: 226 AKAAIEMYKVMRQENVR----ISEVAMVGAI 252
A ++ K M+ + S + M G+I
Sbjct: 443 WDGASKVRKKMKALGIHKKPGFSSIEMDGSI 473
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK--- 367
++S++S I +G+ EA F +M+ G+ PN +TF+ +L+AC+ L +G +
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPL--EGLRFGG 111
Query: 368 QFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
R G+ TE++ T +VD+ + GQL+ A L+ D ++ +W ++ C
Sbjct: 112 SIHAYVRKLGLD--TENVMVGTALVDMYSKCGQLDLAW-LMFDEMHVRNSVSWNTMIDGC 168
Query: 425 KVHVNAELGE 434
N E+GE
Sbjct: 169 M--RNGEVGE 176
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 233/442 (52%), Gaps = 13/442 (2%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D+L+ AR+VF+ + + W ++I +V F++++ L KM LG+ T++++
Sbjct: 237 DDLNGAREVFEAMVE-NLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTI 295
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS---AMVAGYANCGNMKA 166
++ACA V S ++G A L + + + S A++ Y +
Sbjct: 296 ISACANVGSF---------QMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A++ + M +N +TW A+++GY G + EAK F+E+ + M QNG+
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
++++K MR + + A GA++AC+ LG +E L + + + V NA+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M++KCG ++ A F + + D++S++SMI A HG +A+++F +M EG+ P++
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDR 526
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TF+ VLTACSH GLVE G F M +GI P +H MVDL R+G A +I
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
A W ALL C++H N +LG AA L +L P+ G LL+NIYA +G+W D
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWND 646
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
V+ ++ + +K P CSWI
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWI 668
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 208/488 (42%), Gaps = 83/488 (17%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVFDQIPK----- 64
+F+ + VH++++ + KP FL RLL++ N+ YARQ+F++IP
Sbjct: 28 SFSLARAVHAHMIASGFKPR------GHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIA 81
Query: 65 ---------------------------CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL 97
+ + ++I + + ++ L+ M R
Sbjct: 82 RTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRD 141
Query: 98 GVLTSGFTFSSVLNACARVPSLLEA---VICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
FTF+SVL+A + + C K G+ + + +++ V S +
Sbjct: 142 DFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
C M +A++ +D M +++ +TW MI GY + ++ A++VF+ + E + W
Sbjct: 202 GIP---CSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWN 258
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
AM YV G + A+ + + MR ++ ++ ISAC +G +M + ++ +
Sbjct: 259 AMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKN 318
Query: 275 CCDRTN----YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ + VSNALI ++ K +D A + F + +++I+++++++ + + G+ +EA
Sbjct: 319 ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEA 378
Query: 331 -------------------------------LDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
L +F +MR +G EP F G LTACS
Sbjct: 379 KSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVL 438
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
G +E+G +Q G + M+ + + G +E A S+ + D +W +
Sbjct: 439 GALENG-RQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS-VDLVSWNS 496
Query: 420 LLGACKVH 427
++ A H
Sbjct: 497 MIAALGQH 504
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 27/259 (10%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
+F KQ+H+Y+LK P+ + + L + + AR++F +P + W
Sbjct: 304 SFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMP-VRNIITW 362
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
+++ +V ++ + +M +LT L +I G + G
Sbjct: 363 NAILSGYVNAGRMEEAKSFFEEMPVKNLLT------------------LTVMISGLAQNG 404
Query: 132 LMDDAQRLFDSMA----ERNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWV 183
D+ +LF M E +++ + + G ++ ++ + ++ E +
Sbjct: 405 FGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGN 464
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
AMI+ Y KCG V A+ VF + D W +M Q+G+ AIE++ M +E V
Sbjct: 465 AMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFP 524
Query: 244 SEVAMVGAISACTQLGDVE 262
+ + ++AC+ G VE
Sbjct: 525 DRITFLTVLTACSHAGLVE 543
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 147/369 (39%), Gaps = 102/369 (27%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD--RMTEKNSVTWVAMIAGYGKCG 193
A++LF+ + + I+ + ++ Y GN++ +E ++ + ++SV + AMI GY
Sbjct: 67 ARQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYA--- 123
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
NG +A+E+++ MR+++ R + +S
Sbjct: 124 ----------------------------HNGDGHSALELFRAMRRDDFRPDDFTFTSVLS 155
Query: 254 ACT-------QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK--------CGYLDL 298
A Q G + A + GC + V NAL+ ++ K C +
Sbjct: 156 ALVLFVGNEQQCGQMHCAVV---KTGMGCVSSS--VLNALLSVYVKRASELGIPCSAMVS 210
Query: 299 AWREFSRIKNKDVISYSSMITAFADH-------------------------------GKS 327
A + F + +D +++++MIT + + G
Sbjct: 211 ARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCF 270
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
QEAL + KMR GI+ + +T+ +++AC++ G + G KQ + P H C
Sbjct: 271 QEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMG-KQMHAYILKNELNP--NHSFC 327
Query: 388 ------MVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
++ L ++ ++++A + M ++ TW A+L +VNA E A+
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVRNII---TWNAILSG---YVNAGRME-EAKS 380
Query: 440 LLELGPEKT 448
E P K
Sbjct: 381 FFEEMPVKN 389
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 247/479 (51%), Gaps = 24/479 (5%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
R+K+ +++Q H+++LKT HD + +SYA + ++I
Sbjct: 48 RAKSLTEIQQAHAFMLKT-GLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRI-GSPNG 105
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA------ 122
F S+IR + + ++ ++ +M V ++F+ VL ACA E
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 123 ---------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
++ Y + G + A+++ D M R+ +SW+++++ Y G + A
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEA 225
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK 227
+ +D M E+N +W MI+GY G V+EAK+VFD + D W AM Y G
Sbjct: 226 RALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYN 285
Query: 228 AAIEMYKVMRQENVRISE-VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+E++ M ++ + +V +SAC LG + + ++D+ + +++ AL
Sbjct: 286 EVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATAL 345
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M+SKCG +D A F +DV +++S+I+ + HG ++AL++F +M EG +PN
Sbjct: 346 VDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNG 405
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TFIGVL+AC+H G+++ K FE+M+ V+ ++P EH CMVDLLGR G++E+A L+
Sbjct: 406 ITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVN 465
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
+ + +LLGACK E E A LLEL + A ++N+YAS G+W+
Sbjct: 466 EIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWE 524
>gi|224141025|ref|XP_002323875.1| predicted protein [Populus trichocarpa]
gi|222866877|gb|EEF04008.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 242/443 (54%), Gaps = 25/443 (5%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
+ ++LKQ+H++ L L HD A+ L P +L+YA+++FDQ+P T F
Sbjct: 6 NSMSRLKQIHAHSL--LAGLHDHSIILAKMLRFAAVSPSGDLAYAQRLFDQLPHPNT-FF 62
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV--------PSLLE- 121
+ +LIR + + S+ L +M + GV FTF+ ++ A +RV P ++E
Sbjct: 63 YNTLIRGYAKSSIPSYSLHLVNQMRQNGVDPDEFTFNFLIKARSRVRVNINRNLPLVVEC 122
Query: 122 -AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
+ K+G + LF RN A++ YA GN A +D + V
Sbjct: 123 DEIHGAVLKLGF---SSHLF----VRN-----ALIHLYAARGNPVVAWRVFDETVGVDVV 170
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
+W ++ + + GE+ A+ VFD++ E D W M Y Q Y++ A+E+Y M +
Sbjct: 171 SWSGLVLAHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTMLDKG 230
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
VR EV +V ISACT LGD++M + ++DE + NALI M++KCG +D AW
Sbjct: 231 VRPDEVTLVSVISACTNLGDLQMGYSVHSYIDENGFRWMVSLCNALIDMYAKCGCMDRAW 290
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
+ F+ + K +++++SMI+A A++ ++A +F +M N G+ P+ VTF+ VLTA +H G
Sbjct: 291 QVFNSMSRKSLVTWNSMISACANNRNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHVG 350
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LV++G + FE M R GI+ EH C+V++LG++G LE+A LI + WG L
Sbjct: 351 LVDEGYRLFESMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFELITSMPLPSNDVVWGVL 410
Query: 421 LGACKVHVNAELGEIAARHLLEL 443
L AC+ H + +GE + LLEL
Sbjct: 411 LAACRKHGDVYMGERVVKKLLEL 433
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 267/541 (49%), Gaps = 67/541 (12%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S+ ++VH+ +++T +D+ + A L+ + GD + A VF ++PK
Sbjct: 215 SRDLEAGRKVHAMVVRT---GYDKDVFTANALVDMYSKLGD-IHMAALVFGKVPKTDV-V 269
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN------------------ 111
W + I VLH H + ++ L +M G++ + FT SS+L
Sbjct: 270 SWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHG 329
Query: 112 ----ACARVPSLLE-AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
ACA + A++ Y K GL+DDA+++F+ + ++++ W+A+++G ++ G
Sbjct: 330 FMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGE 389
Query: 167 AKEFYDRM----TEKNSVTWVA-----------------------------------MIA 187
+ + RM ++ N T A +I
Sbjct: 390 SLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLID 449
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
Y KC +R A KVF+E S + + +M Q + + AI+++ M ++ +
Sbjct: 450 SYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFV 509
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ ++AC L E + H+ + + NAL++ ++KCG ++ A FS +
Sbjct: 510 LSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP 569
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+K V+S+S+MI A HG + ALD+F +M +E I PN +T VL AC+H GLV++
Sbjct: 570 DKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKG 629
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F M +FGI EH +CM+DLLGR+G+L+ A L+ +A WGALL A +VH
Sbjct: 630 YFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVH 689
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
+ ELG++AA L L PEK+G LLAN YAS G W + V+ ++ +++ KK P SW
Sbjct: 690 RDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSW 749
Query: 488 I 488
+
Sbjct: 750 V 750
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 37/264 (14%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK--------- 177
Y+K L A+R+FD + +SWS++V Y+N + A + M +
Sbjct: 47 YSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFAL 106
Query: 178 ---------------------------NSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPD 209
+ A++A YG G V EA++VFDE + + +
Sbjct: 107 PIVLKCAPDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRN 166
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
A W M +V+N A+E++ M VR +E ++ACT D+E +
Sbjct: 167 AVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHA 226
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
V D+ + +NAL+ M+SK G + +A F ++ DV+S+++ I+ HG Q
Sbjct: 227 MVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQH 286
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVL 353
AL++ L+M++ G+ PN T +L
Sbjct: 287 ALELLLQMKSSGLVPNVFTLSSIL 310
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 175/422 (41%), Gaps = 75/422 (17%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLL---QLPGDNLSYARQVFDQIPKCKTQFLWTSL 74
+H++LLK+ H + L+ +LPG AR+VFD+ P W+SL
Sbjct: 25 HIHAHLLKS-----GLLHAFRNHLLSFYSKCRLPGS----ARRVFDETPD-PCHVSWSSL 74
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL--------------- 119
+ + +A R+++ + M GV + F VL CA L
Sbjct: 75 VTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGLGVQVHAVAVSTGLSG 133
Query: 120 ----LEAVICGYTKIGLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
A++ Y G +D+A+R+FD A +RN +SW+ M++ + A E + M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEM 193
Query: 175 T---------------------------------------EKNSVTWVAMIAGYGKCGEV 195
+K+ T A++ Y K G++
Sbjct: 194 VWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDI 253
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A VF ++ + D W A V +G+ + A+E+ M+ + + + + AC
Sbjct: 254 HMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKAC 313
Query: 256 TQLGDVEMAAILAKH--VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
G A H + + C D +Y+ AL+ M++K G LD A + F I KD++
Sbjct: 314 AGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLL 373
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++++I+ + G E+L +F +MR EG + N+ T VL + + + D + L
Sbjct: 374 WNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAE 433
Query: 374 RV 375
++
Sbjct: 434 KI 435
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 134/276 (48%), Gaps = 16/276 (5%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+++ Y KC A++VFDE +P W+++ Y N + A+ ++ MR VR +
Sbjct: 43 LLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCN 102
Query: 245 EVAMVGAISACTQLG-DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
E A+ + G V++ A+ V G +V+NAL+ M+ G++D A R F
Sbjct: 103 EFALPIVLKCAPDAGLGVQVHAVA---VSTGLSGDI-FVANALVAMYGGFGFVDEARRVF 158
Query: 304 SR-IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
++++ +S++ M++AF + + +A+++F +M G+ PN+ F V+ AC+ +
Sbjct: 159 DEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDL 218
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
E G K ++ R G +VD+ + G + A +L+ D +W A +
Sbjct: 219 EAGRKVHAMVVRT-GYDKDVFTANALVDMYSKLGDIHMA-ALVFGKVPKTDVVSWNAFIS 276
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
C +H + + H LEL + +S L+ N++
Sbjct: 277 GCVLHGHDQ-------HALEL-LLQMKSSGLVPNVF 304
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/496 (31%), Positives = 255/496 (51%), Gaps = 64/496 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD +P + W ++I + + + Q++ + +M G+ T +S+L CA
Sbjct: 226 ARSLFDDMP-FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCA 284
Query: 115 RVPSL--------------LE-------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
++ + LE A+I Y K G + DAQ++F M R+V+SW++
Sbjct: 285 QLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNS 344
Query: 154 MVAGYANCGNMKAAKEFYDRMT-----------------------EKNSVT--------- 181
++A Y + A+ F+ +M KNS +
Sbjct: 345 IIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRG 404
Query: 182 WV--AMIAG------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
W+ A++ G Y K G + A KVF+ I D W + Y QNG A AIE+Y
Sbjct: 405 WLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVY 464
Query: 234 KVMRQ-ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
++M + +++++ V ++A +G ++ + H+ + +V LI ++ K
Sbjct: 465 RMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGK 524
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG L A F ++ + + ++++I+ HG ++AL +F +M++EG++P+ VTFI +
Sbjct: 525 CGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISL 584
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+ACSH GLV++G F LM +GIKP +H CMVDLLGR+G LE A+ I D
Sbjct: 585 LSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHP 643
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
DA WGALLGAC++H N ELG+ A+ L E+ E G LL+NIYA++GKW+ + V+
Sbjct: 644 DASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRS 703
Query: 473 MISETEKKKSPGCSWI 488
+ E KK+PG S I
Sbjct: 704 LARERGLKKTPGWSSI 719
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 199/458 (43%), Gaps = 77/458 (16%)
Query: 42 IRLLQLPGD--NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV 99
IRL+ L ++S +R FDQI + K + W S+I +V + HFR++I + ++ +
Sbjct: 112 IRLVNLYASLGDVSLSRGTFDQIQR-KDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTK 170
Query: 100 LTSGF-TFSSVLNACARVPS------------------LLEAVICGYTKIGLMDDAQRLF 140
+ F TF VL AC + + ++I Y++ G + A+ LF
Sbjct: 171 FQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLF 230
Query: 141 DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV------------- 183
D M R++ SW+AM++G GN A + D M +SVT
Sbjct: 231 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDIS 290
Query: 184 ----------------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
A+I Y K G + +A+KVF ++ D W ++ Y
Sbjct: 291 TATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYE 350
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV-DEGCCDRTN 280
QN A + M+ + + +V S Q D + + + + G
Sbjct: 351 QNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAV 410
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN- 339
+ NA++ M++K G +D A + F+ I KDV+S++++I+ + +G + EA++++ M
Sbjct: 411 VIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEEC 470
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG-IKPLTEHL-----TCMVDLLG 393
I+ NQ T++ +L A +H G ++ G R+ G + HL TC++DL G
Sbjct: 471 REIKLNQGTWVSILAAYAHVGALQQG-------MRIHGHLIKTNLHLDVFVGTCLIDLYG 523
Query: 394 RSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
+ G+L A L W A++ +H + E
Sbjct: 524 KCGRLVDAMCLFYQVPRESSV-PWNAIISCHGIHGHGE 560
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 50/234 (21%)
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK- 336
++N++S L+++++ G + L+ F +I+ KDV +++SMI+A+ +G +EA+D F +
Sbjct: 106 QSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQL 165
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDG----CKQFELMTRVFGIKPLTEHLTCMVDLL 392
+ + + TF VL AC + DG C F+L G + ++ +
Sbjct: 166 LLVTKFQADFYTFPPVLKACQ---TLVDGRKIHCWVFKL-----GFQWDVFVAASLIHMY 217
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLG------------------------------ 422
R G + A SL D F D G+W A++
Sbjct: 218 SRFGFVGIARSLFDDMP-FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTV 276
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTG------NSALLANIYASMGKWKDSEIV 470
A + V A+LG+I+ L+ L K G S L N+YA G D++ V
Sbjct: 277 ASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKV 330
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 236/438 (53%), Gaps = 11/438 (2%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ ARQ+FD+ K ++ +++ N+V H +++ +M + G T S +
Sbjct: 281 DICAARQIFDECAN-KNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTI 339
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
ACA++ G +G A L + + + IS +A++ Y CG +AA +
Sbjct: 340 AACAQL---------GDLSVGKSSHAYVLRNGLEGWDNIS-NAIIDMYMKCGKREAACKV 389
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++ M K VTW ++IAG + G++ A ++FDE+ E D W M VQ + AI
Sbjct: 390 FEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAI 449
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
E+++ M+ + + V MVG SAC LG +++A + ++++ + AL+ M
Sbjct: 450 ELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMF 509
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
S+CG A F R++ +DV ++++ I A G ++ A+++F +M + ++P+ V F+
Sbjct: 510 SRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFV 569
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
+LTACSHGG V+ G + F M + GI+P H CMVDLLGR+G LE+A LI
Sbjct: 570 ALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPI 629
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
+ WG+LL AC+ H N EL AA L +L PE+ G LL+NIYAS GKW D V
Sbjct: 630 EPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARV 689
Query: 471 KMMISETEKKKSPGCSWI 488
++ + E +K PG S I
Sbjct: 690 RLQMKEKGVQKVPGSSSI 707
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 228/523 (43%), Gaps = 95/523 (18%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVF- 59
+S L+ KT +LKQ+H ++K H + + +Q+ ++L YAR F
Sbjct: 27 SSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFG 86
Query: 60 DQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL 119
D + F++ LIR + Q+ILLY +M +G++ +TF +L+AC+++ +L
Sbjct: 87 DDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILAL 146
Query: 120 LEAV---------------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
E V I Y + G +D ++LFD M ERNV+SW++++ GY
Sbjct: 147 SEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGY 206
Query: 159 ANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG-------------------------- 188
+ K A + +M E N VT V +I+
Sbjct: 207 SGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELST 266
Query: 189 ---------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
Y KCG++ A+++FDE + + + + YV + +A + + M Q+
Sbjct: 267 IMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQK 326
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY---- 295
R +V M+ I+AC QLGD+ + +V + + +SNA+I M+ KCG
Sbjct: 327 GPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAA 386
Query: 296 ---------------------------LDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
++LAWR F + +D++S+++MI A +
Sbjct: 387 CKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFE 446
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
EA+++F +M+N+GI ++VT +G+ +AC + G + D K I + T +
Sbjct: 447 EAIELFREMQNQGIPGDRVTMVGIASACGYLGAL-DLAKWVCTYIEKNDIHVDLQLGTAL 505
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
VD+ R G A + + D W A +G + N E
Sbjct: 506 VDMFSRCGDPSSAMHVFKRMEKR-DVSAWTAAIGVMAMEGNTE 547
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 131/277 (47%), Gaps = 18/277 (6%)
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK---------NSVTWVAMIAGYGKC 192
S+ E N I+ ++ NC +K K+ + M +K N +A G
Sbjct: 16 SLKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTL 75
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA-----AIEMYKVMRQENVRISEVA 247
+ A+ F + AS + M C ++ GYA A AI +Y M + +
Sbjct: 76 ESLDYARNAFGDDDGNMASLF--MYNCLIR-GYASAGLGDQAILLYVQMLVMGIVPDKYT 132
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+SAC+++ + + V + + +VSN+LIH +++CG +DL + F +
Sbjct: 133 FPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGML 192
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
++V+S++S+I ++ S+EA+ +F +M G+EPN VT + V++AC+ +E G K
Sbjct: 193 ERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKK 252
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
++ G++ T + +VD+ + G + A +
Sbjct: 253 VCSYISE-LGMELSTIMVNALVDMYMKCGDICAARQI 288
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 274/547 (50%), Gaps = 74/547 (13%)
Query: 10 SKTFNQLK------QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
SK+F+ L+ Q+H ++LK+ + + L+ L + AR+VFD++
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKS---GFGERNSVGNSLVAFY-LKNQRVDSARKVFDEMT 257
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVPSLLE 121
+ + W S+I +V + + + ++ +M G+ T SV CA R+ SL
Sbjct: 258 E-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 122 AV--------------ICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
AV C Y+K G +D A+ +F M++R+V+S+++M+AGYA G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 163 NMKAAKEFYDRMTEKN------SVT--------------------WV------------- 183
A + ++ M E+ +VT W+
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
A++ Y KCG ++EA+ VF E+ D W + Y +N YA A+ ++ ++ +E R
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK-RF 495
Query: 244 S--EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
S E + + AC L + + ++ +V+N+L+ M++KCG L LA
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F I +KD++S++ MI + HG +EA+ +F +MR GIE ++++F+ +L ACSH GL
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + F +M I+P EH C+VD+L R+G L KA+ I + DA WGALL
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
C++H + +L E A + EL PE TG L+ANIYA KW+ + ++ I + +K
Sbjct: 676 CGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK 735
Query: 482 SPGCSWI 488
+PGCSWI
Sbjct: 736 NPGCSWI 742
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 192/440 (43%), Gaps = 68/440 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A +VFD++ K + W L+ F SI L+ KM GV +TFS V
Sbjct: 144 DLKEASRVFDEV-KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 111 NACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ + + S+ +++ Y K +D A+++FD M ER+VI
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG----------------- 188
SW++++ GY + G + + +M E + T V++ AG
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 189 ------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
Y KCG++ AK VF E+S+ + +M Y + G A A+
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++++ M +E + + ++ C + ++ + + + E +VSNAL+ M+
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF-LKMRNEGIEPNQVTF 349
+KCG + A FS ++ KD+IS++++I ++ + + EAL +F L + + P++ T
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 350 IGVLTACSHGGLVEDGCKQFELMTR--VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
VL AC+ + G + + R F + + L VD+ + G L AH L D
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL---VDMYAKCGALLLAHMLFDD 559
Query: 408 YKDFCDAGTWGALLGACKVH 427
D +W ++ +H
Sbjct: 560 IASK-DLVSWTVMIAGYGMH 578
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 9/226 (3%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y CG+++EA +VFDE+ A W + ++G +I ++K M V +
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+ + L V L + + N V N+L+ + K +D A + F +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+DVIS++S+I + +G +++ L +F++M GIE + T + V C+ L+ G
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG--- 315
Query: 369 FELMTRVFGIKPL--TEHLTC--MVDLLGRSGQLEKAHSLIMDYKD 410
G+K E C ++D+ + G L+ A ++ + D
Sbjct: 316 --RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/497 (30%), Positives = 244/497 (49%), Gaps = 61/497 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD P+ W +I +V + ++ L+ M G+ TF+S L
Sbjct: 210 LQAARKLFDTSPQSDL-VSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLP 268
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
+ SL A+I Y K ++ AQ++ + + +
Sbjct: 269 CVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVV 328
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG------------------ 188
+ M++GY G K A E + + ++ SVT+ ++
Sbjct: 329 CTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSII 388
Query: 189 -----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
Y KCG + A +VF+ I+E DA CW +M QNG AI
Sbjct: 389 KTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAIN 448
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M E R V++ GA+SAC L + + + +G Y ++LI M++
Sbjct: 449 LFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYA 508
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG L+ + R F R++ ++ +S++S+I+A+ +HG +E L +F +M GI+P+ VTF+G
Sbjct: 509 KCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLG 568
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+++AC H G V++G + + LMT +GI EH C+ D+ GR+G+L++A I
Sbjct: 569 IISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFP 628
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
DAG WG LLGAC +H N EL E+A++HL +L P +G LLAN+ A GKW+ V+
Sbjct: 629 PDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVR 688
Query: 472 MMISETEKKKSPGCSWI 488
++ E +K PG SWI
Sbjct: 689 SIMKERGVRKVPGYSWI 705
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 44/300 (14%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
W +IR + F ++L Y KM GV +TF V+ AC CG +
Sbjct: 26 WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKAC-----------CGLKSV 74
Query: 131 GLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
+ + M + +V S+++ YA G++ A+ +D + +K+SV W M+ GY
Sbjct: 75 KMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGY 134
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
K G+ A K+F E MR ++ + V
Sbjct: 135 VKNGDSGNAIKIFLE-------------------------------MRHSEIKPNSVTFA 163
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+S C +++ L + + V+N L+ M+SKC L A + F
Sbjct: 164 CVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQS 223
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
D++S++ +I+ + +G EA +F M + GI+P+ +TF L C + L CK+
Sbjct: 224 DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL-PCVNELLSLKHCKEI 282
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 141/315 (44%), Gaps = 46/315 (14%)
Query: 44 LLQLPGDN--LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT 101
L++L +N LS A+ +FD IP+ K LW ++ +V + +I ++ +M +
Sbjct: 99 LIKLYAENGHLSDAQYLFDNIPQ-KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKP 157
Query: 102 SGFTFSSVLNACARVPSLLEAVICGYTKI-GLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
+ TF+ VL+ CA EA++ T++ G+ DS + ++A Y+
Sbjct: 158 NSVTFACVLSVCAS-----EAMLDLGTQLHGIAVSCGLELDSPVA------NTLLAMYSK 206
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
C ++AA++ +D + + V+W +I+G Y
Sbjct: 207 CQCLQAARKLFDTSPQSDLVSWNGIISG-------------------------------Y 235
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
VQNG A +++ M ++ + + +L ++ + ++
Sbjct: 236 VQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDV 295
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
++ +ALI ++ KC +++A + + + D + ++MI+ + +GK++EAL+ F + E
Sbjct: 296 FLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQE 355
Query: 341 GIEPNQVTFIGVLTA 355
++P VTF + A
Sbjct: 356 RMKPTSVTFSSIFPA 370
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 236/438 (53%), Gaps = 11/438 (2%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L +R+ FD++ + W S+I + R+ L+ +M R G L FT S+L
Sbjct: 162 SLGDSRRFFDEMVD-RNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLL 220
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
AC++ G +IG + R+ S + ++I SA+V Y CG++ A+
Sbjct: 221 IACSQE---------GNLEIGRLVHC-RMLVSGSRVDLILESALVDMYGKCGDLWMARRC 270
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++ M K+ V+W +M+ K G V A+ FD + E + W AM CYVQ G A+
Sbjct: 271 FEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEAL 330
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++Y M+ + + E+ +V +SA ++GD+ + ++ ++ + + + N+L+ M+
Sbjct: 331 DLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMY 390
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG +D A FS + N++V+S++ +I A HG++ + + F M + P+ +TF+
Sbjct: 391 AKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFV 450
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
+L+ACSHGGL+E G FE M V+ +K EH CMVDLLGR G LEKA LI +
Sbjct: 451 ALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPM 510
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D WGALLGAC++H N ++G + LLEL G L++N+ +W+D + +
Sbjct: 511 KPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKRL 570
Query: 471 KMMISETEKKKSPGCSWI 488
+ ++ E +K G S I
Sbjct: 571 RKLMKEWGTRKDMGVSSI 588
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 208/466 (44%), Gaps = 96/466 (20%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIR----LLQLPGDNLSYARQVFDQ 61
L+ + ++ +L Q+H++LL H + L+ L + L +AR++FD
Sbjct: 17 LLRQCRSIQRLNQLHAHLL-----VHGSLSAASDLLLASYCALAKAGHGVLCHARRLFDG 71
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC----ARVP 117
IP + ++ ++IR + + R+++ L+ M R G+L + FT V+ AC AR
Sbjct: 72 IPG-PDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREH 130
Query: 118 SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
+L AV ++GL+ V +A++ YA+ G++ ++ F+D M ++
Sbjct: 131 AL--AVHGVALRLGLVG------------QVFVGNALLHSYASAGSLGDSRRFFDEMVDR 176
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
N V+W +MI GY + G+ RE +F E MR
Sbjct: 177 NVVSWNSMIGGYAQAGDTREVCSLFGE-------------------------------MR 205
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
++ E +V + AC+Q G++E+ ++ + + +AL+ M+ KCG L
Sbjct: 206 RQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLW 265
Query: 298 LAWREFSRIKNKDVISYSSMITAFADH-------------------------------GK 326
+A R F + K V+S++SM+ A H G+
Sbjct: 266 MARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQ 325
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
EALD++ +M+++G+ P+++T + VL+A G + G K L R P +
Sbjct: 326 CHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVG-KMVHLYIRDNIYNPDVSLVN 384
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAG--TWGALLGACKVHVNA 430
++D+ + GQ++ A SL + + C+ +W ++G +H A
Sbjct: 385 SLLDMYAKCGQVDTAISL---FSEMCNRNVVSWNVIIGGLAMHGRA 427
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 244/482 (50%), Gaps = 69/482 (14%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV-ICGYT- 128
W S++ V + + +++ Y +M G S++ A AR + L + I Y
Sbjct: 351 WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAM 410
Query: 129 KIGLMDDAQR-------------------LFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
K GL D Q +FD M +++V+SW+ ++AG+A G+ A E
Sbjct: 411 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALE 470
Query: 170 FYDRMTEKNSVTWVAMIAG--------------------------------------YGK 191
+ + + V MI+ YG+
Sbjct: 471 LFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGE 530
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG V A ++F+ I D W +M CYV NG A A+E++ +M++ V +++V
Sbjct: 531 CGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSI 590
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYV-----SNALIHMHSKCGYLDLAWREFSRI 306
+SA L ++ + G R +V ++ L+ M+++CG L+ + F+ I
Sbjct: 591 LSAAASLSALKKGKEI-----HGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFI 645
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
+NKD++ ++SMI A+ HG + A+D+F +M +E I P+ + F+ VL ACSH GL+ +G
Sbjct: 646 RNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGR 705
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
+ E M + ++P EH C+VDLLGR+ LE+A+ + + A W ALLGAC++
Sbjct: 706 RFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQI 765
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H N ELGEIAA+ LLE+ PE GN L++N+Y++ +WKD E V+M + + KK+PGCS
Sbjct: 766 HSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCS 825
Query: 487 WI 488
WI
Sbjct: 826 WI 827
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 221/484 (45%), Gaps = 81/484 (16%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFL-IRLLQLPGDN--LSYARQVFDQIPKCKT 67
K ++ +QVH++++ + + + FL RL+ + G L A ++FD +P KT
Sbjct: 92 KALSEGQQVHAHMITS------NALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPH-KT 144
Query: 68 QFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--------- 118
F W ++I +V + S+ LY +M G+ TF +L AC +
Sbjct: 145 IFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHG 204
Query: 119 ------------LLEAVICGYTKIGLMDDAQRLFDSMAER-NVISWSAMVAGYANCGNMK 165
+ +++ YTK ++ A++LFD M E+ +V+SW++M++ Y++ G
Sbjct: 205 LAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSI 264
Query: 166 AAKEFYDRMTE----KNSVTWVA-----------------------------------MI 186
A + M + N+ T+VA +I
Sbjct: 265 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 324
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
A Y + G++ EA +F + + D W +M +VQNG A++ Y MR + V
Sbjct: 325 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 384
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK-CG--YLDLAWREF 303
A++ I+A + G+ + + + D V N+L+ M++K C Y+D F
Sbjct: 385 AVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI---F 441
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
++ +KDV+S++++I A +G AL++F +++ EGI+ + + +L ACS L+
Sbjct: 442 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLIS 501
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ + R G+ L +VD+ G G ++ A + + + +F D +W +++ +
Sbjct: 502 SVKEIHSYIIRK-GLSDLVLQ-NGIVDVYGECGNVDYA-ARMFELIEFKDVVSWTSMI-S 557
Query: 424 CKVH 427
C VH
Sbjct: 558 CYVH 561
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 161/321 (50%), Gaps = 26/321 (8%)
Query: 117 PSLLEAVICGYTKIGLMDDA-QRLFDSMAERNVISWSAMVAGYAN----CGNMKA---AK 168
PSL E IC K G +++A Q L D A ++ +S + Y++ CG+ KA +
Sbjct: 45 PSLRE--IC---KRGSVNEAFQSLTDLFANQSPSQFS-LDEAYSSVLELCGSKKALSEGQ 98
Query: 169 EFYDRMTEKNSV-----TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+ + M N++ ++ YGKCG + +A+K+FD + W AM YV N
Sbjct: 99 QVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTN 158
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA-ILAKHVDEGCCDRTNYV 282
G ++E+Y+ MR + + + AC L D A + + EG +V
Sbjct: 159 GEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIV-FV 217
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
+N+++ M++KC L+ A + F R+ K DV+S++SMI+A++ +G+S EAL +F +M+
Sbjct: 218 ANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKAS 277
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGC-KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
+ PN TF+ L AC ++ G ++ + I + ++ + R G++ +
Sbjct: 278 LAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGE 335
Query: 401 AHSLIMDYKDFCDAGTWGALL 421
A ++ + D+ D +W ++L
Sbjct: 336 AANIFYNMDDW-DTISWNSML 355
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 127/306 (41%), Gaps = 74/306 (24%)
Query: 18 QVHSYLLKT-----LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
Q+H+Y +K L + YA+F ++ Y +FD++P K WT
Sbjct: 404 QIHAYAMKNGLDSDLQVGNSLVDMYAKFC---------SMKYMDCIFDKMPD-KDVVSWT 453
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP--------------- 117
++I H + +++ L+ ++ G+ SS+L AC+ +
Sbjct: 454 TIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRK 513
Query: 118 -----SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
L ++ Y + G +D A R+F+ + ++V+SW++M++ Y + G A E +
Sbjct: 514 GLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 573
Query: 173 RM----TEKNSVTWVA-----------------------------------MIAGYGKCG 193
M E +S++ V+ ++ Y +CG
Sbjct: 574 LMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCG 633
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
+ +++ VF+ I D W +M Y +G +AAI++++ M E++ +A V +
Sbjct: 634 TLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLY 693
Query: 254 ACTQLG 259
AC+ G
Sbjct: 694 ACSHSG 699
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 124/294 (42%), Gaps = 41/294 (13%)
Query: 11 KTFNQLKQVHSYLLKT----LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCK 66
K + +K++HSY+++ L + Y + N+ YA ++F+ I + K
Sbjct: 498 KLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGE---------CGNVDYAARMFELI-EFK 547
Query: 67 TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP--------- 117
WTS+I +V + +++ L+ M GV + S+L+A A +
Sbjct: 548 DVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIH 607
Query: 118 ------------SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMK 165
SL ++ Y + G ++ ++ +F+ + ++++ W++M+ Y G +
Sbjct: 608 GFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGR 667
Query: 166 AAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCY 220
AA + + RM ++ + + +VA++ G + E ++ + + E W C
Sbjct: 668 AAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACL 727
Query: 221 VQ-NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE 273
V G A E Y+ ++ V + + AC + E+ I A+ + E
Sbjct: 728 VDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLE 781
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 235/438 (53%), Gaps = 11/438 (2%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD++ + WT+LI + ++ ++ +M V S + L
Sbjct: 182 LPDARKLFDEMAD-RDVVSWTTLIDGYARGGLPDEAWRVFCRMV---VAESVWPNEVTLV 237
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A A + + G T Q + +S +V +A+V + CG + AAKE +
Sbjct: 238 AAASAAGQMGLLGLGRTV------HQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVF 291
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D M K+ +W +M++ Y KCG++ A K+F EI + W+ M Y AI
Sbjct: 292 DGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIR 351
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL-AKHVDEGCCDRTNYVSNALIHMH 290
++ M V + +V +SAC QL +++ L ++ + T +SNA I M
Sbjct: 352 IFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMF 411
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG + A R FS +++K+V+S+++MI A HG+ +EAL +F + + GI P++ T+I
Sbjct: 412 AKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYI 471
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
GVL+ACSHGGLV +G F+ M V+GI+P EH CM+DLLG+ G L++A +
Sbjct: 472 GVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPV 531
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D WGALL AC++H N E+G+ AA L L P +G L++ IYAS KW +++
Sbjct: 532 GADEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKML 591
Query: 471 KMMISETEKKKSPGCSWI 488
+ ++ + KK+PGCS I
Sbjct: 592 RTVMRDRRVKKNPGCSSI 609
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 212/409 (51%), Gaps = 40/409 (9%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT--- 175
L ++ Y K G +DDA+R+FD M +++++W+A++AG++ + A + +M
Sbjct: 125 LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLG 184
Query: 176 -EKNSVTWV-----------------------------------AMIAGYGKCGEVREAK 199
+ N T A++ Y +CG + A+
Sbjct: 185 FQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ 244
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
FD + W A+ + + G + A+ + M+++N + + +SAC +G
Sbjct: 245 LAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIG 304
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+E + H+ + ++ N L+ M++K G +D A R F R+ DV+S+++M+T
Sbjct: 305 ALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLT 364
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK 379
A HG +E LD F +M GIEPN+++F+ VLTACSH GL+++G FELM + + ++
Sbjct: 365 GCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVE 423
Query: 380 PLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
P H VDLLGR G L++A I + A WGALLGAC++H N ELG AA
Sbjct: 424 PDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAER 483
Query: 440 LLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL P +G LL+NIYAS G+W+D V+ M+ E+ KK P CSW+
Sbjct: 484 AFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWV 532
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 135/314 (42%), Gaps = 69/314 (21%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD++P K WT+LI + R ++LL+ +M RLG + FT SS+L
Sbjct: 139 LDDARRMFDEMP-TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 112 ACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
A L A++ Y + G MD AQ FD M ++ +S
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKN---------SV-------------TWV----- 183
W+A+++G+A G + A +M KN SV WV
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317
Query: 184 ------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
++ Y K G + +AK+VFD + +PD W M Q+G K ++
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMA----AILAKHVDEGCCDRTNYVSNALI 287
++ M + + +E++ + ++AC+ G ++ ++ K+ E D +YV+ +
Sbjct: 378 RFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVE--PDVPHYVT--FV 433
Query: 288 HMHSKCGYLDLAWR 301
+ + G LD A R
Sbjct: 434 DLLGRVGLLDRAER 447
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 252 ISACTQLGDVEMAAILAKH-VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+ CT+LG VE I+ H VD D + N +++M++KCG LD A R F + KD
Sbjct: 94 LKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKD 153
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC-SHGGLVEDGCKQF 369
+++++++I F+ + + ++AL +F +M G +PN T +L A S GL D Q
Sbjct: 154 MVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGL--DPGTQL 211
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
+G + + +VD+ R G ++ A L D +W AL+ H
Sbjct: 212 HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ-LAFDGMPTKSEVSWNALISG---HAR 267
Query: 430 AELGEIAARHLL------ELGPEKTGNSALL---ANIYA-SMGKWKDSEIVK 471
GE A HLL P S++L A+I A GKW + ++K
Sbjct: 268 KGEGE-HALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIK 318
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 33/252 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ A+ FD +P K++ W +LI H ++ L KM R + FT+SSVL
Sbjct: 239 HMDAAQLAFDGMP-TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVL 297
Query: 111 NACARVPSLLEA---------------------VICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA + +L + ++ Y K G +DDA+R+FD + + +V+
Sbjct: 298 SACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVV 357
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
SW+ M+ G A G K + +++M E N ++++ ++ G + E F+ +
Sbjct: 358 SWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM 417
Query: 206 S----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
EPD + + G A + M E A++G AC ++
Sbjct: 418 KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLG---ACRMHKNM 474
Query: 262 EMAAILAKHVDE 273
E+ A+ E
Sbjct: 475 ELGVYAAERAFE 486
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 235/459 (51%), Gaps = 28/459 (6%)
Query: 57 QVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGF-TFSSVLNACA- 114
+F +PK + WT++I + + ++LL+ +M R +T TF S+ ACA
Sbjct: 186 HLFRTMPK-RNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAG 244
Query: 115 ----RVPSLLEA-------------------VICGYTKIGLMDDAQRLFDSMAERNVI-S 150
R+ L A +IC Y+ IG MD A +F+ + V+ S
Sbjct: 245 LGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQS 304
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
+ M+ GY G + A+ +D M ++ +TW +MI GY G V EA +F + E DA
Sbjct: 305 CNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMPEKDA 364
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
W M +V+N A ++ M + VR A + ++ L
Sbjct: 365 VAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQLHAM 424
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ + D + N+LI M++KCG + A+R FS++ + D+IS++SMI F+ HG + EA
Sbjct: 425 LTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHDLISWNSMIMGFSHHGLANEA 484
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVD 390
L++F M + G PN VTF+GVL+ACSH GL+ G + F M+ VF ++P EH CMV+
Sbjct: 485 LEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFNAMSDVFAVQPGLEHYICMVN 544
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV-HVNAELGEIAARHLLELGPEKTG 449
LLGR+G+L++A LI+ + WGALLG C NA++ + AA +LEL P
Sbjct: 545 LLGRAGKLKEAEELILGLPLERNHAIWGALLGVCSFSEKNADIAKRAATRILELDPLNAP 604
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL NIYA+ G+ + ++ + KK PGCSWI
Sbjct: 605 AHVLLCNIYAASGQHIEEHKLRKEMGLKGVKKVPGCSWI 643
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 174/418 (41%), Gaps = 93/418 (22%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------- 121
WTSL+ + ++ L+ M ++ S +L C R+ ++
Sbjct: 13 WTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQ-CGRLSEAMKLFEEMPERN 71
Query: 122 -----AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
+++CG G + +A+ LF+ M +RNV+SW+AM+ G G+++AA+ +D
Sbjct: 72 VVSWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLIRNGDLEAARMVFDESPV 131
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
KN+ +W MIAGY + G + EA+ +FDE+ + + W +M Y + G + +++ M
Sbjct: 132 KNAASWNGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGYHLFRTM 191
Query: 237 RQENVRISEVAMVGAIS---------------------------------ACTQLGDVEM 263
+ N+ +S AM+G + AC LG +
Sbjct: 192 PKRNI-VSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRL 250
Query: 264 AAIL-AKHVDEGCCDRTNY---VSNALIHMHSKCGYLDLAWREFSRIKN----------- 308
L A+ + EG D +Y +S LI M+S G++D A F++ N
Sbjct: 251 GKQLHARLITEG-LDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMI 309
Query: 309 ---------------------KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
+D I+++SMI + G EA +FL M E + V
Sbjct: 310 NGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIGNVSEACSLFLYMP----EKDAV 365
Query: 348 TFIGVLTACSHGGLVEDGCKQF-ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
+ +++ L + F E++T+ G++PL+ + G L++ L
Sbjct: 366 AWTTMISGHVRNELFAEATYLFSEMLTQ--GVRPLSSTYAILFGAAGAVASLDQGRQL 421
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 49/285 (17%)
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
++ W+++++ Y+ G + A+ +D M E+N+V++ A+++G +CG + EA K+F+E+ E
Sbjct: 10 IVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPE 69
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA--- 264
+ W +M G A +++ M NV +VG I + GD+E A
Sbjct: 70 RNVVSWTSMLCGLADAGKICEAKSLFEEMPDRNVVSWNAMIVGLI----RNGDLEAARMV 125
Query: 265 -------------AILAKHVDEGCC-----------DRTNYVSNALIHMHSKCGYLDLAW 300
++A + + G DR +++ + + G ++ +
Sbjct: 126 FDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNVITWTSMVSGYCRAGEVEEGY 185
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTFIGVLTACS-- 357
F + ++++S+++MI F +G ++AL +FL+M R I PN TFI + AC+
Sbjct: 186 HLFRTMPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGL 245
Query: 358 ---------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG 393
H L+ +G + R L++ L CM +G
Sbjct: 246 GFHRLGKQLHARLITEGLDNDDYDGR------LSKGLICMYSSIG 284
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 247/494 (50%), Gaps = 61/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++FD++P+ + W ++I + ++++ L +M G T +VL A A
Sbjct: 201 AYKMFDRMPE-RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAA 259
Query: 115 RVPSLL-------EAVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSA 153
V L+ A+ G Y+K G ++ A+ +FD M ++ V+SW++
Sbjct: 260 DVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNS 319
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWV-------------------------- 183
M+ GY G + A +++M E+ VT +
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
++I+ Y KC V A +F+ ++ W AM + Y QNG A+ +
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFS 439
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ ++ MV I A +L A + + C D+ +V+ AL+ M+SKCG
Sbjct: 440 EMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCG 499
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ +A + F I ++ VI++++MI + HG + ALD+F KM+ +EPN +T++ V++
Sbjct: 500 AIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVIS 559
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV++G + F+ M + +G++P +H MVDLLGR+G++++A I +
Sbjct: 560 ACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGI 619
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
+GA GACK+H N E+GE AA+ L EL P++ G LLANIYAS KW V+ +
Sbjct: 620 TVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTM 679
Query: 475 SETEKKKSPGCSWI 488
+ KK+PGCS +
Sbjct: 680 EKKGLKKTPGCSVV 693
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 39/278 (14%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN-------------------------- 160
++K G +++A R+F+ + ++ + M+ GYA
Sbjct: 91 FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150
Query: 161 ------CGN---MKAAKEFYDRMTEKNSVTWVAMIAG----YGKCGEVREAKKVFDEISE 207
CG+ +K KE + ++ + V + G Y KC ++ +A K+FD + E
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W + + QNG+AK A+E+ M+ E R + +V + A +G + + +
Sbjct: 211 RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSI 270
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+ + +S AL M+SKCG ++ A F + K V+S++SM+ + +G+
Sbjct: 271 HGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEP 330
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
++A+ +F KM EGI+P VT + L AC+ G +E G
Sbjct: 331 EKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG 368
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 125/265 (47%), Gaps = 2/265 (0%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+++ + K G + EA +VF+ I + + + M Y +N + A+ MR ++V+
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ C D++ + + + +++M++KC +D A++ F
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
R+ +D++S++++I F+ +G +++AL++ L+M++EG P+ +T + VL A + GL+
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G R G L T + D+ + G +E A LI D D +W +++
Sbjct: 267 GKSIHGYAIRA-GFAKLVNISTALADMYSKCGSVETAR-LIFDGMDQKTVVSWNSMMDGY 324
Query: 425 KVHVNAELGEIAARHLLELGPEKTG 449
+ E +LE G + TG
Sbjct: 325 VQNGEPEKAIAVFEKMLEEGIDPTG 349
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 241/503 (47%), Gaps = 65/503 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIR--NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
+L+YAR+VFD P + ++W +L+R +H +H ++ LY +M GV +T+
Sbjct: 67 SLAYARRVFDATP-VRDAYMWNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPI 125
Query: 109 VLNACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSM--AE 145
VL ACA L A+I Y + G + DA+ +F +
Sbjct: 126 VLPACAAARELWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSS 185
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWV------------------ 183
R V+SW++MVAGY A + M + N +T +
Sbjct: 186 RTVVSWTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMV 245
Query: 184 -----------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A+IA YGKCG + A+ +F+ + + W M Y Q+
Sbjct: 246 HGFVIRLGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADV 305
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
AI+ ++ M E V V +V +SAC + G ++ + + D + N L
Sbjct: 306 VEAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVL 365
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M++KCG + A F ++ + V+S+S+MI+A+A+HG S+EAL +F M+NEG+ PN
Sbjct: 366 VDMYAKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNS 425
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
TF VL AC H GLVE+G K F + + + P EH CMVD+LGR+G+L +A+ +I
Sbjct: 426 FTFTAVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIR 485
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
D WGA L CK+H N EL E AR L + G L++N+Y G KD
Sbjct: 486 GMSLCPDKCVWGAFLAGCKLHGNLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAGMLKD 545
Query: 467 SEIVKMMISETEKKKSPGCSWIS 489
+E ++ + E E K+ G S I+
Sbjct: 546 AERMRWAMKEMELNKTAGRSAIN 568
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 276/554 (49%), Gaps = 74/554 (13%)
Query: 1 MTSKYLVPRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQLP-GDNLSYARQ 57
++ +L + ++ KQ H+ LL+T L P ++ LI L L +L+YAR+
Sbjct: 12 ISVDFLKTHCTSISKTKQAHALLLRTHLLHNP-----LFSSKLISFLALSHSGDLNYARK 66
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
+F Q+ F+ ++IR + + +++ LY M GV +T+ VL ACAR+
Sbjct: 67 LFTQMQN-PDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLG 125
Query: 118 SL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
++ + A+I Y G A +FD R+V++W+ M+
Sbjct: 126 AVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMIN 185
Query: 157 GYANCGNMKAAKEFYDRMTE-----KNSVTWVAMIAG----------------------- 188
+ N G + A + D MT+ + VT V+++
Sbjct: 186 AHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLD 245
Query: 189 ------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
Y KC ++ A++VF+ I E D W +M ++GY + A+ +++ M
Sbjct: 246 ENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKM 305
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD--EGCCDRTNYVSNALIHMHSKCG 294
+ + + E+ +VG +SAC Q G ++ + +D E CD + AL+ M++KCG
Sbjct: 306 QLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLV--LETALVDMYAKCG 363
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+DLA + F R++ ++V +++++I A HG ++A+ +F +M ++ + P+ VTFI +L
Sbjct: 364 SIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLC 423
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLV++G F+ M F I+P EH C+VDLL R+ +++ A + I + ++
Sbjct: 424 ACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANS 483
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
W LLGAC+ + +L E R ++EL P+ G +L+N+YA + +W + ++ +
Sbjct: 484 VLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQM 543
Query: 475 SETEKKKSPGCSWI 488
+K+PGCSWI
Sbjct: 544 KNKGIEKTPGCSWI 557
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 257/497 (51%), Gaps = 40/497 (8%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQ------YHYYAQFLIRLLQLPGDNLSYARQV 58
+L+ + KT +L+++H+ L P+ Q + YA+F P D A ++
Sbjct: 25 HLLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSYAEF-----GRPAD----AGRL 75
Query: 59 FDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA---- 114
FD+IP +TSL+ H+ H ++I +++ G GF L+A
Sbjct: 76 FDEIPHPDI-ISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGD 134
Query: 115 -RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
R+ S++ +I F + ++ +A+V Y CG + A+ +DR
Sbjct: 135 QRIGSVVHGLI---------------FRCGLDSELVVCNALVDMYCRCGKFEPARTVFDR 179
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M K+ VTW +M+ GY KC V A F ++ W A+ +VQ+ A+E++
Sbjct: 180 MLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELF 239
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M E R + + +VG +SAC +G +++ + + + V+NAL+ M++K
Sbjct: 240 GKMLLEGHRPNHITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKS 299
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A+ F ++ KD ++++MI++F G ++A+++F M GI PN VTF+ VL
Sbjct: 300 GSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVL 359
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF-C 412
+ACSH GL+++G + F+ M V+ I P EH CMVDLLGR G LE+A +LI D+ D
Sbjct: 360 SACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALI-DHMDVEP 418
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS-EIVK 471
D W +LL AC H N L EIA + +++ P G LL N+YA +WK++ ++ K
Sbjct: 419 DIVIWRSLLSACLAHGNDRLAEIAGKEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRK 478
Query: 472 MMISETEKKKSPGCSWI 488
M+S KK PGCSWI
Sbjct: 479 QMLSRKIYKK-PGCSWI 494
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 266/514 (51%), Gaps = 41/514 (7%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN-----LSYARQVFD 60
L+ SKT QL Q+H+ ++ H + + QL + ++++ VF+
Sbjct: 87 LIHGSKTILQLHQIHAQII---------IHNLSSSSLITTQLISSSSLRKSINHSLAVFN 137
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL- 119
K K F + +LIR ++HF +I + M R G+ T+ VL + A + S
Sbjct: 138 H-HKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTE 196
Query: 120 ----LEAVI--CG--------------YTKIGLMDDAQRLFDSMAER-----NVISWSAM 154
+ +I CG Y K+ + A ++FD ER + + W+ +
Sbjct: 197 LGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVL 256
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+ G G+MK A + + M +K +V+W +I G+ K G++ A ++FD++ E + W
Sbjct: 257 IKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWT 316
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
M + +NG ++ A+ M+ M +E VR + +V A+SAC ++G +E + K++ +
Sbjct: 317 TMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDN 376
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
T + AL+ M++KCG ++ A F + K + +++ MI +A HG S++A+ F
Sbjct: 377 GLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACF 436
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
+M GI+P++V F+ +LTAC H G V+ G F+ M + I+P +H T +VD+LGR
Sbjct: 437 KQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGR 496
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
SGQL++A I D WGAL AC+ H ++ + A LL+L P TGN L
Sbjct: 497 SGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFL 556
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+N YA++G+W+D+E V++++ K+ G S I
Sbjct: 557 SNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCI 590
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 235/438 (53%), Gaps = 11/438 (2%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD++ + WT+LI + ++ ++ +M V S + L
Sbjct: 182 LPDARKLFDEMAD-RDVVSWTTLIDGYARGGLPDEAWRVFCRMV---VAESVWPNEVTLV 237
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A A + + G T Q + +S +V +A+V + CG + AAKE +
Sbjct: 238 AAASAAGQMGLLGLGRTV------HQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVF 291
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D M K+ +W +M++ Y KCG++ A K+F EI + W+ M Y AI
Sbjct: 292 DGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIR 351
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL-AKHVDEGCCDRTNYVSNALIHMH 290
++ M V + +V +SAC QL +++ L ++ + T +SNA I M
Sbjct: 352 IFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMF 411
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG + A R FS +++K+V+S+++MI A HG+ +EAL +F + + GI P++ T+I
Sbjct: 412 AKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYI 471
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
GVL+ACSHGGLV +G F+ M V+GI+P EH CM+DLLG+ G L++A +
Sbjct: 472 GVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPV 531
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D WGALL AC++H N E+G+ AA L L P +G L++ IYAS KW +++
Sbjct: 532 GADEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKML 591
Query: 471 KMMISETEKKKSPGCSWI 488
+ ++ + KK+PGCS I
Sbjct: 592 RTVMRDRRVKKNPGCSSI 609
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 142/459 (30%), Positives = 236/459 (51%), Gaps = 31/459 (6%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG--VLTSGFTFSSVLNACAR 115
V D P +T + L+R + R ++LL+A M G +T+ L +CA
Sbjct: 76 VLDASPD-RTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAA 134
Query: 116 VPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
L+ + I Y + G DDA ++F+ M R+V+SW+AM
Sbjct: 135 TDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAM 194
Query: 155 VAGYANCGNMKAAKEFYDRMT-----EKNSVTWVAMIAGYGKCG--EVREAKKVFDEISE 207
++G+A+ G A + + + + ++ T +++ GK ++ K VFDE+
Sbjct: 195 ISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRF 254
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
W AM Y N A+E++ M+++ + V + + +C ++ + + +
Sbjct: 255 KGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRI 314
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+ + + + NAL+ M++ CG L A F + +DV+S++S+I+A+ HG
Sbjct: 315 HEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHG 374
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+EA+D+F KM +G+EP+ + F+ +L ACSH GL++ G F MT F I P EH C
Sbjct: 375 REAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYAC 434
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
MVDLLGR+G + +A+ IM + WGALLGAC++H N ++G +AA LL L P++
Sbjct: 435 MVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQ 494
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
TG LL+NIYA G+W D +V+ ++ KK PG S
Sbjct: 495 TGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVS 533
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 234/480 (48%), Gaps = 62/480 (12%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL---------- 119
LW ++ + + +S ++ +M G++ + +T+ S+L C + +L
Sbjct: 382 LWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQV 441
Query: 120 ------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA--------- 159
+C Y K G +D A+ + + E +V+SW+AM+AGY
Sbjct: 442 IKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEAL 501
Query: 160 -------------------------------NCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
N G A+ + +E S+ A+++
Sbjct: 502 KLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG-NALVSL 560
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y +CG ++A F++I D W A+ + Q+G+ + A++++ M Q V +
Sbjct: 561 YARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTF 620
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
A+SA +++ + + + D SN LI ++SKCG ++ A REF +
Sbjct: 621 GSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPE 680
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
K+V+S+++MIT ++ HG EA+ +F +M+ G+ PN VTF+GVL+ACSH GLV +G
Sbjct: 681 KNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSY 740
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F M++ G+ P EH C+VDLLGR+ L A I + DA W LL AC VH
Sbjct: 741 FRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHK 800
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N E+GE AARHLLEL PE + LL+N+YA GKW + + M+ + KK PG SWI
Sbjct: 801 NIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWI 860
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 185/427 (43%), Gaps = 63/427 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A+ VF+++ K W ++I + ++ILL+ +MH+ V+ + + FSSVL+AC
Sbjct: 166 AKLVFERL-FLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACT 224
Query: 115 RVPSL----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSA 153
++ E +C Y++ G + A+++F M R+ IS+++
Sbjct: 225 KIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNS 284
Query: 154 MVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAG--------------------- 188
+++G A G A + +++M + + VT ++++
Sbjct: 285 LISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMG 344
Query: 189 --------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
Y KC ++ A + F + W M V Y Q G + ++
Sbjct: 345 MSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFL 404
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ E + ++ + CT LG +++ + V + YV + LI M++K G
Sbjct: 405 QMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHG 464
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
LD A R++ +DV+S+++MI + H EAL +F +M N+GI + + F ++
Sbjct: 465 ELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAIS 524
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC+ + G +Q + + G +V L R G+ + A+ L + D D
Sbjct: 525 ACAGIQALNQG-QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAY-LAFEKIDAKDN 582
Query: 415 GTWGALL 421
+W AL+
Sbjct: 583 ISWNALI 589
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 185/434 (42%), Gaps = 64/434 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++FD IP F W +I + Q + L++ M V TF+SVL AC+
Sbjct: 64 AIKLFDDIPSSNVSF-WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122
Query: 115 ----------------------RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
P + +I Y+K G +D A+ +F+ + ++ +SW
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWV 182
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEK----------------------------------- 177
AM++G + G A + +M +
Sbjct: 183 AMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKW 242
Query: 178 --NSVTWV--AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+S T+V A++ Y + G + A+++F ++ D + ++ Q G++ A++++
Sbjct: 243 GLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLF 302
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M+ + ++ V + +SAC +G L +V + + +L+ ++ KC
Sbjct: 303 EKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKC 362
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
++ A F + ++V+ ++ M+ A+ G E+ +FL+M+ EG+ PNQ T+ +L
Sbjct: 363 FDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSIL 422
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
C+ G ++ G +Q G + + ++D+ + G+L+ A ++ ++ D
Sbjct: 423 RTCTSLGALDLG-EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREE-D 480
Query: 414 AGTWGALLGACKVH 427
+W A++ H
Sbjct: 481 VVSWTAMIAGYTQH 494
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 75/310 (24%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYA-QFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
+Q+H+ ++K+ Q++ Y LI + G+ L AR + ++ + + WT++I
Sbjct: 435 EQIHTQVIKS----GFQFNVYVCSVLIDMYAKHGE-LDTARGILQRLRE-EDVVSWTAMI 488
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------------- 121
+ H F +++ L+ +M G+ + FSS ++ACA + +L +
Sbjct: 489 AGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYS 548
Query: 122 -------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY---------------- 158
A++ Y + G DA F+ + ++ ISW+A+++G+
Sbjct: 549 EDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQM 608
Query: 159 -------------------ANCGNMKAAKEF--------YDRMTEKNSVTWVAMIAGYGK 191
AN N+K K+ YD TE ++V +I Y K
Sbjct: 609 NQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNV----LITLYSK 664
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
CG + +AK+ F E+ E + W AM Y Q+GY A+ +++ M+Q + + V VG
Sbjct: 665 CGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGV 724
Query: 252 ISACTQLGDV 261
+SAC+ +G V
Sbjct: 725 LSACSHVGLV 734
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 153/363 (42%), Gaps = 50/363 (13%)
Query: 84 FRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSM 143
F LL AK + SGF VL + +I Y G +D+A +LFD +
Sbjct: 21 FNSGSLLDAKKLHARIFKSGFDGEDVLGS---------RLIDIYLAHGEVDNAIKLFDDI 71
Query: 144 AERNVISWSAMVAG----------------------------YAN----CGNMKAAKEFY 171
NV W+ +++G +A+ C KA +
Sbjct: 72 PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVT 131
Query: 172 DRMTEK--------NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQN 223
+++ K + + +I Y K G V AK VF+ + D+ W AM QN
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191
Query: 224 GYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
G AI ++ M + V + +SACT++ ++ L + + +V
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC 251
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
NAL+ ++S+ G L A + FS++ +D ISY+S+I+ A G S AL +F KM+ + ++
Sbjct: 252 NALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMK 311
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
P+ VT +L+AC+ G G KQ G+ ++DL + +E AH
Sbjct: 312 PDCVTVASLLSACASVGAGYKG-KQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHE 370
Query: 404 LIM 406
+
Sbjct: 371 YFL 373
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 14/274 (5%)
Query: 143 MAER----NVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGE 194
M ER NV ++ + G N G++ AK+ + R+ + V +I Y GE
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V A K+FD+I + S W + + A + ++ +M ENV E + A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 255 CTQLGDVEMAA---ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
C+ G I AK + G + V N LI ++SK G++DLA F R+ KD
Sbjct: 121 CSG-GKAPFQVTEQIHAKIIHHG-FGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDS 178
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S+ +MI+ + +G+ EA+ +F +M + P F VL+AC+ L + G +Q
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG-EQLHG 237
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+G+ T +V L R G L A +
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIF 271
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/532 (28%), Positives = 256/532 (48%), Gaps = 94/532 (17%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ L YA VF+ I + +W ++ R H L ++ LY M LG+L + +TF +
Sbjct: 11 EGLPYAISVFETIQE-PNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69
Query: 110 LNACARVPSLLE------------------------------------------------ 121
L +CA++ + E
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129
Query: 122 ----AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
A++ GY G ++ A+ +FD + ++V+SW+AM++GY GN K A E + M +
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 178 N-------------------SV-------TWVA-------------MIAGYGKCGEVREA 198
N S+ +W+A +I Y KCGE+ A
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
+F +S D W + Y K A+ +++ M + ++V M+ + AC L
Sbjct: 250 CGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHL 309
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
G +++ + ++D+ TN S +LI M+SKCG ++ A + F+ + +K + ++++
Sbjct: 310 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNA 369
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI FA HG++ A D+F +MR I+P+ +TF+G+L+ACSH G+++ G F MT +
Sbjct: 370 MIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNY 429
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
I P EH CM+DLLG SG ++A +I D W +LL ACK+H N ELGE
Sbjct: 430 KITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKF 489
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A++L ++ P G+ LL+NIYA+ G+W + ++ ++++ KK PGCS I
Sbjct: 490 AQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSI 541
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 128/307 (41%), Gaps = 57/307 (18%)
Query: 49 GDNLSYARQVFDQIPKC---------------KTQFLWTSLIRNHVLHAHFRQSILLYAK 93
G NL + D KC K W LI + +++++LL+ +
Sbjct: 227 GSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQE 286
Query: 94 MHRLGVLTSGFTFSSVLNACARV-----------------------PSLLEAVICGYTKI 130
M R G + T S+L+ACA + SL ++I Y+K
Sbjct: 287 MLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKC 346
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMI 186
G ++ A ++F+SM +++ +W+AM+ G+A G AA + + RM + + +T+V ++
Sbjct: 347 GDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLL 406
Query: 187 AGYGKCGEVREAKKVFDEISE-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
+ G + + +F ++ P + M +G K A EM M E
Sbjct: 407 SACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEP- 465
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI-HMHSKCGYLDLAW 300
V + AC G+VE+ A+++ + + N S L+ ++++ G W
Sbjct: 466 --DGVIWCSLLKACKMHGNVELGEKFAQNLFK--IEPNNPGSYVLLSNIYATAG----RW 517
Query: 301 REFSRIK 307
E +RI+
Sbjct: 518 NEVARIR 524
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 274/547 (50%), Gaps = 74/547 (13%)
Query: 10 SKTFNQLK------QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
SK+F+ L+ Q+H ++LK+ + + L+ L + AR+VFD++
Sbjct: 51 SKSFSSLRSVHGGEQLHGFILKS---GFGERNSVGNSLVAFY-LKNQRVDSARKVFDEMT 106
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVPSLLE 121
+ + W S+I +V + + + ++ +M G+ T SV CA R+ SL
Sbjct: 107 E-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 165
Query: 122 AV--------------ICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
AV C Y+K G +D A+ +F M++R+V+S+++M+AGYA G
Sbjct: 166 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 225
Query: 163 NMKAAKEFYDRMTEKN------SVT--------------------WV------------- 183
A + ++ M E+ +VT W+
Sbjct: 226 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 285
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
A++ Y KCG ++EA+ VF E+ D W + Y +N YA A+ ++ ++ +E R
Sbjct: 286 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK-RF 344
Query: 244 S--EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
S E + + AC L + + ++ +V+N+L+ M++KCG L LA
Sbjct: 345 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 404
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F I +KD++S++ MI + HG +EA+ +F +MR GIE ++++F+ +L ACSH GL
Sbjct: 405 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 464
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + F +M I+P EH C+VD+L R+G L KA+ I + DA WGALL
Sbjct: 465 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 524
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
C++H + +L E A + EL PE TG L+ANIYA KW+ + ++ I + +K
Sbjct: 525 CGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK 584
Query: 482 SPGCSWI 488
+PGCSWI
Sbjct: 585 NPGCSWI 591
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 187/432 (43%), Gaps = 68/432 (15%)
Query: 59 FDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS 118
FD++ K + W L+ F SI L+ KM GV +TFS V + + + S
Sbjct: 1 FDEV-KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 59
Query: 119 LL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
+ +++ Y K +D A+++FD M ER+VISW++++ G
Sbjct: 60 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119
Query: 158 YANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG------------------------- 188
Y + G + + +M E + T V++ AG
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 189 ----------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
Y KCG++ AK VF E+S+ + +M Y + G A A+++++ M +
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
E + + ++ C + ++ + + + E +VSNAL+ M++KCG +
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF-LKMRNEGIEPNQVTFIGVLTACS 357
A FS ++ KD+IS++++I ++ + + EAL +F L + + P++ T VL AC+
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359
Query: 358 HGGLVEDGCKQFELMTR--VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
+ G + + R F + + L VD+ + G L AH L D D
Sbjct: 360 SLSAFDKGREIHGYIMRNGYFSDRHVANSL---VDMYAKCGALLLAHMLFDDIAS-KDLV 415
Query: 416 TWGALLGACKVH 427
+W ++ +H
Sbjct: 416 SWTVMIAGYGMH 427
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 244/498 (48%), Gaps = 62/498 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++YA + F ++ + LW ++I+ + I +Y M V + FTF VL
Sbjct: 34 DVNYAHKAFREVSEPDI-LLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 111 NACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC + +++ Y K G + A+ +FD + +R V+
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKN-SVTWVAMIA--------------------- 187
SW+++++GY G+ A + M + N W+A+++
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212
Query: 188 -----------------GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
Y K G V A+ F+ + +P+ W AM Y NGY + AI
Sbjct: 213 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 272
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++++ M +N+R+ + M A+ A Q+G +E+A L ++ + +V+ LI M+
Sbjct: 273 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 332
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG + LA F R+ +KDV+ +S MI + HG QEA+ ++ +M+ G+ PN TFI
Sbjct: 333 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 392
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
G+LTAC + GLV++G + F LM GI+P +H +C+VDLLGR+G L +A+ IM
Sbjct: 393 GLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 451
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
WGALL ACK+H LGEIAA L L P TG+ L+N+YAS W V
Sbjct: 452 KPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANV 511
Query: 471 KMMISETEKKKSPGCSWI 488
++M+++ K G S I
Sbjct: 512 RLMMTQKGLNKDLGHSSI 529
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 131/288 (45%), Gaps = 14/288 (4%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G+V A K F E+SEPD W A+ Y Q A I MY M+ V + + +
Sbjct: 33 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 92
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
AC + + + +V N+L+ M++K G + A F ++ ++ V+
Sbjct: 93 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 152
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++S+I+ + +G EAL++F +MR ++P+ + + V+TA ++ + G L+
Sbjct: 153 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 212
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
T++ G++ + + + + + G +E A + + + W A++ + N
Sbjct: 213 TKL-GLEFEPDIVISLTTMYAKRGLVEVA-RFFFNRMEKPNLILWNAMISG---YANNGY 267
Query: 433 GEIAARHLLELGPEK------TGNSALLANIYAS---MGKWKDSEIVK 471
GE A + E+ + T SA+LA+ + +W D I K
Sbjct: 268 GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK 315
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 246/459 (53%), Gaps = 28/459 (6%)
Query: 35 HYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM 94
H+YA +L A +VFD++P+ + WT+L+ + ++ L+ +M
Sbjct: 186 HFYANH---------KSLDDAGKVFDEMPE-RDVVSWTTLVDGYARAGLADEAWRLFCRM 235
Query: 95 HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE----RNVIS 150
V+ G ++V L A + ++GL+ L + E R+V
Sbjct: 236 ----VVVGGMRPNAVT---------LVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNL 282
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
+A+V + CG ++ A+E +D M K+ +W +M+ Y KCG++ A+++F ++ +
Sbjct: 283 DNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNV 342
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA-ILAK 269
W+ M Y Q + A+ +++ M V + +V +SAC QLG +++ I
Sbjct: 343 VSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYEN 402
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
++ T + NALI M +KCG + A + F + ++V+S+++MI A A HG+S+E
Sbjct: 403 YIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEE 462
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
A+ +F +++ E I P+Q+TF+G+L +CSH GLV +G + F+ M + I+P EH CM+
Sbjct: 463 AIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMI 522
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLG+ G LE+A + D WGALL AC++H N E+G A L+EL P +G
Sbjct: 523 DLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSG 582
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L++ IYAS KW ++++M + + KK+PGCS I
Sbjct: 583 IYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSI 621
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNE 340
V NAL+H ++ LD A + F + +DV+S+++++ +A G + EA +F +M
Sbjct: 180 VGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVG 239
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
G+ PN VT + ++A GL+ G + +T G+ +VD+ G+ G +
Sbjct: 240 GMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTE-GGVARSVNLDNALVDMFGKCGCVRY 298
Query: 401 AHSLIMDYKDFCDAGTWGALLGA 423
A + D + D +W +++ A
Sbjct: 299 ARE-VFDGMEVKDVYSWTSMVNA 320
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 238/436 (54%), Gaps = 13/436 (2%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++F+++P K W ++I ++L +++++Y M R G+ + ++++AC
Sbjct: 486 ARELFERVPD-KDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACG 544
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
R L A+ G+ G++ ++ FD N I + ++ YA CG M A ++
Sbjct: 545 R----LNAIGDGWQLHGMV--VKKGFDCY---NFIQ-TTIIHFYAACGMMDLACLQFEVG 594
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+ + +W A+++G+ K V +A+K+FD++ E D W+ M Y Q ++ A+E++
Sbjct: 595 AKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFH 654
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M ++ +EV MV SA LG ++ +++ + + ALI M++KCG
Sbjct: 655 KMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCG 714
Query: 295 YLDLAWREFSRIKNK--DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
++ A + F++I++K V ++++I A HG + LD+F M+ I+PN +TFIGV
Sbjct: 715 SINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGV 774
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+AC H GLVE G + F +M + ++P +H CMVDLLGR+G LE+A +I
Sbjct: 775 LSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKA 834
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
D WG LL AC+ H + +GE AA L L P G LL+NIYA G+W+D +V+
Sbjct: 835 DIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRR 894
Query: 473 MISETEKKKSPGCSWI 488
I ++ PGCS +
Sbjct: 895 AIQNQRMERMPGCSGV 910
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 190/414 (45%), Gaps = 46/414 (11%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD +P K +T++I V + FR+++ ++ M GV+ + T +V+
Sbjct: 351 LDNARKLFDIMPD-KGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIY 409
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
AC+ +L + I L E V+ + ++ Y C + A+ +
Sbjct: 410 ACSHFGEILNCRMIHAIAIKLF----------VEGLVLVSTNLMRAYCLCSGVGEARRLF 459
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
DRM E N V+W M+ GY K G V A+++F+ + + D W M Y+ A+
Sbjct: 460 DRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALV 519
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
MY+ M + + ++E+ +V +SAC +L + L V + D N++ +IH ++
Sbjct: 520 MYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYA 579
Query: 292 KCGYLDLAWREFSR----------------IKN---------------KDVISYSSMITA 320
CG +DLA +F IKN +DV S+S+MI+
Sbjct: 580 ACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISG 639
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
+A +S+ AL++F KM GI+PN+VT + V +A + G +++G E + P
Sbjct: 640 YAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICN--ESIP 697
Query: 381 LTEHL-TCMVDLLGRSGQLEKAHSLIMDYKDFC-DAGTWGALLGACKVHVNAEL 432
L ++L ++D+ + G + A +D W A++ H +A +
Sbjct: 698 LNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASM 751
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 76/311 (24%)
Query: 86 QSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE 145
Q L++ + +LG+ ++ F +S++N Y K G + DAQ LFD+
Sbjct: 287 QGRQLHSLVLKLGLHSNTFIQNSLINM--------------YAKRGSIKDAQLLFDACPT 332
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
N IS + MV GYA G + A++ +D M +K V++ MI G
Sbjct: 333 LNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMG----------------- 375
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV---- 261
VQN + A+E++K MR + V +++ +V I AC+ G++
Sbjct: 376 --------------LVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCR 421
Query: 262 EMAAILAKHVDEGCC-----------------------DR---TNYVS-NALIHMHSKCG 294
+ AI K EG DR N VS N +++ ++K G
Sbjct: 422 MIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAG 481
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+D+A F R+ +KDVIS+ +MI + + EAL M+ M G+ N++ + +++
Sbjct: 482 LVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVS 541
Query: 355 ACSHGGLVEDG 365
AC + DG
Sbjct: 542 ACGRLNAIGDG 552
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 17/178 (9%)
Query: 276 CDRTNYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
C N +S N ++ ++K G LD A + F + +K +SY++MI + +EAL++F
Sbjct: 330 CPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVF 389
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
MR++G+ PN +T + V+ ACSH G + + C+ M IK E L + L R
Sbjct: 390 KDMRSDGVVPNDLTLVNVIYACSHFGEILN-CR----MIHAIAIKLFVEGLVLVSTNLMR 444
Query: 395 -----SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
SG E + D + +W +L + A L ++ AR L E P+K
Sbjct: 445 AYCLCSGVGEARR--LFDRMPEVNLVSWNVMLNG---YAKAGLVDM-ARELFERVPDK 496
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 148/498 (29%), Positives = 244/498 (48%), Gaps = 63/498 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
NL +RQVFD+ ++ W S+I + +++ L+ +M G + TF S+L
Sbjct: 103 NLRASRQVFDET-STRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLL 161
Query: 111 NACARVP--SLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERN 147
+ A SL + +++ Y G +D A +F +++E+
Sbjct: 162 SGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKT 221
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV----TWVAMIAG--------------- 188
VISW+ M+ GY G + E + +M + N V +V +I+
Sbjct: 222 VISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHS 281
Query: 189 --------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
Y KCG++ A+ VFD +SE W +M Y GY +
Sbjct: 282 LLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPRE 341
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+ ++ + Q NVR + + AISAC LG + M + + + + VS +LIH
Sbjct: 342 ALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIH 401
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
++ K G ++ A + F+ + ++D+ ++SSM+ +A HG ++ +++F +M+ GI+P+
Sbjct: 402 LYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSV 461
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
+ +L ACSH GLVEDG + F+ M +GI P H TC+VD+L R+G LE A + I +
Sbjct: 462 YASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEM 521
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+ W L AC+ + + ELGE+A R LL P N L+AN+Y SMGKWK++
Sbjct: 522 PTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAA 581
Query: 469 IVKMMISETEKKKSPGCS 486
V+ +I + K PGCS
Sbjct: 582 KVRSLIDDKGLVKEPGCS 599
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 185/426 (43%), Gaps = 68/426 (15%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---- 121
K +LW IR+ V F QS+ Y+ M G+ + FTF +L ACA + S+ +
Sbjct: 16 KPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTML 75
Query: 122 -----------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
+++ Y+K + ++++FD + R+VISW++M+A Y+ +
Sbjct: 76 HAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRV 135
Query: 165 KAAKEFYDRMT----EKNSVTWVAMIAG-------------------------------- 188
A + + M E NS T+V++++G
Sbjct: 136 NEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVEN 195
Query: 189 -----YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
Y G++ A VF ISE W M Y++ G E + MRQ NV +
Sbjct: 196 SLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVL 255
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+ V IS+C QLG++ + + L + + + + LI M+SKCG L A F
Sbjct: 256 DKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVF 315
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ K + S++SMI+ +A+ G +EAL +F + PN ++AC+ G +
Sbjct: 316 DLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLS 375
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALL 421
++ E + G+ ++ T ++ L + G +EKA + M ++D W +++
Sbjct: 376 MR-REIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDL---AAWSSMM 431
Query: 422 GACKVH 427
VH
Sbjct: 432 NGYAVH 437
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 50/219 (22%)
Query: 40 FLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV 99
LI + GD LS AR VFD + + K+ + WTS+I + + R+++ L++ + V
Sbjct: 297 LLISMYSKCGDLLS-ARAVFDLLSE-KSIYSWTSMISGYANAGYPREALSLFSMATQNNV 354
Query: 100 LTSGFTFSSVLNACARVPSL-----LEAVICG----------------YTKIGLMDDAQR 138
+G ++ ++ACA + SL +EA I Y K G ++ A++
Sbjct: 355 RPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEK 414
Query: 139 LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREA 198
+F+SM R++ +WS+M+ GYA G + + M +++ +
Sbjct: 415 VFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEM-QRSGI------------------ 455
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
+PD S +A++ + +G + +E +K M+
Sbjct: 456 --------KPDGSVYASILLACSHSGLVEDGLEHFKNMQ 486
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 159/545 (29%), Positives = 264/545 (48%), Gaps = 71/545 (13%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
K+ + LKQ+H +KT + FL D L Y R + QF
Sbjct: 17 KSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPD-LFYIRSIL-LTHSHDAQFC 74
Query: 71 WTSLIRNHVLHAHFRQSILLYA-----KMHRLGVLTSGFTFSSVLNACARVPSLLEA--- 122
+ + N ++ + R SI L +M +G+ GFT VL A A + + E
Sbjct: 75 LS--LCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQI 132
Query: 123 -------------------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG- 162
++ Y+ G + D Q++FD R+++SW+ ++ + G
Sbjct: 133 HARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGL 192
Query: 163 ---NMKAAKEFYDRMTEKNSVTWVAMIAG------------------------------- 188
++A E D + T V +++
Sbjct: 193 YSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGN 252
Query: 189 -----YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
Y KC ++ A KVFDE+ + W AM G + A++ +++M+ + V+
Sbjct: 253 ALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKP 312
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
EV +VG +++C LG +E+ + ++ +V NAL+ M++KCG +D A+R F
Sbjct: 313 DEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVF 372
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+K +DV SY++MI A HG++ A +F +M GIEPN+VTF+G+L ACSHGGLV
Sbjct: 373 ESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVA 432
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G K F M+ + ++P EH CM+DLLGR+G +++A +I + D GALLGA
Sbjct: 433 EGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGA 492
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
C++H N ++GE + L EL P++ G L+ N+Y+S+ +WKD+ ++ + + +K+P
Sbjct: 493 CRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTP 552
Query: 484 GCSWI 488
GCS I
Sbjct: 553 GCSLI 557
>gi|356576967|ref|XP_003556601.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Glycine max]
Length = 453
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 222/370 (60%), Gaps = 4/370 (1%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++ G K G ++DA+ LFD M RNV+SW+AM+ G+A + A E + M E++ +
Sbjct: 51 TMVAGLLKNGRVEDARALFDRMPVRNVVSWNAMIMGHAQNRRLHEALELFQGMPERDMHS 110
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY-KVMRQEN 240
W MI G+ + G++ A+K+F E+ E +A W AM + YVQ+G ++ A++++ K++ +
Sbjct: 111 WNTMITGFIQNGKLNYAEKLFGEMREKNAITWTAMMMGYVQHGLSEEALKVFNKMLANDG 170
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
++ + V + AC+ L + + + + + + + + LI+M+ KCG L A
Sbjct: 171 LKPNTGTFVTVLRACSDLAGLTEGQQIHQMISKTVF-QDSXICGTLINMYPKCGELHTAK 229
Query: 301 REFSR--IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
F + +D+IS++ MI +A HG +EA+++F +M+ G+ N VTF+G+L ACSH
Sbjct: 230 XMFDDGLLSQRDLISWNGMIAGYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLRACSH 289
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
G+VE+G K F+ + + I +H C+VDL R+G+L++A ++I WG
Sbjct: 290 TGVVEEGLKYFDEILKNRSIXLREDHYACLVDLCDRTGRLKEAFNIIEGLGKESPLTVWG 349
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
LL C VH N ++G++ A+ +L++ P+ G +LL+N+YAS+GKWK++ ++M +++
Sbjct: 350 VLLARCNVHGNVDIGKLVAKKILKIEPQNAGTHSLLSNMYASVGKWKEAANIRMKMNDKG 409
Query: 479 KKKSPGCSWI 488
KK PG SWI
Sbjct: 410 LKKQPGYSWI 419
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 237/440 (53%), Gaps = 15/440 (3%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D L + P T F +TS I H ++ L ++M G++ + T SS
Sbjct: 81 DRLDLTVTLLRLTPDPTTVF-YTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSS 139
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L AC + +L A+ K+ L D+ +A++ YA G+ AA+
Sbjct: 140 LPACHGL-ALGRALHAYAFKLALAGDS------------YVATALLGMYARGGDADAARA 186
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D M + + V AM+ Y K G + +A+++FD + D CW AM Y Q+G A
Sbjct: 187 LFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEA 246
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIH 288
+ +++ M + V EVA++ A+SA QLG E L +V + N V ALI
Sbjct: 247 LRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALID 306
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG L+ A F+ I +KD++ +++MI +A HG S++AL+MF ++R++G+ P +T
Sbjct: 307 MYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDIT 366
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
FIG+L ACSH GLV++G + F+ M + I P EH CMVDLLGR+G +E+A L+
Sbjct: 367 FIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSM 426
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
D W +LL AC++H N LG+ A +L+ G +G LL+NIYA++G W++
Sbjct: 427 TIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVA 486
Query: 469 IVKMMISETEKKKSPGCSWI 488
V+ M+ + +K PGCS I
Sbjct: 487 RVRSMMKASGIQKEPGCSAI 506
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 237/440 (53%), Gaps = 15/440 (3%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D L + P T F +TS I H ++ L ++M G++ + T SS
Sbjct: 80 DRLDLTVTLLRLTPDPTTVF-YTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSS 138
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
L AC + +L A+ K+ L D+ +A++ YA G+ AA+
Sbjct: 139 LPACHGL-ALGRALHAYAFKLALAGDS------------YVATALLGMYARGGDADAARA 185
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D M + + V AM+ Y K G + +A+++FD + D CW AM Y Q+G A
Sbjct: 186 LFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEA 245
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN-YVSNALIH 288
+ +++ M + V EVA++ A+SA QLG E L +V + N V ALI
Sbjct: 246 LRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALID 305
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG L+ A F+ I +KD++ +++MI +A HG S++AL+MF ++R++G+ P +T
Sbjct: 306 MYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDIT 365
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
FIG+L ACSH GLV++G + F+ M + I P EH CMVDLLGR+G +E+A L+
Sbjct: 366 FIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSM 425
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
D W +LL AC++H N LG+ A +L+ G +G LL+NIYA++G W++
Sbjct: 426 TIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVA 485
Query: 469 IVKMMISETEKKKSPGCSWI 488
V+ M+ + +K PGCS I
Sbjct: 486 RVRSMMKASGIQKEPGCSAI 505
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 204/368 (55%), Gaps = 1/368 (0%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I G G +++A+ +F + E N +S++ M+ GYA G + +K +++M+ +N +
Sbjct: 313 SLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPENLTS 372
Query: 182 WVAMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
MI+ Y K GE+ EA K+FD+ E + W +M Y+ NG K A+ +Y MR+ +
Sbjct: 373 LNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLS 432
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V S AC+ L +L H+ + YV AL+ +SKCG+L A
Sbjct: 433 VDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQ 492
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
R F I + +V +++++I +A HG EA+ +F M ++GI PN TF+GVL+AC+H G
Sbjct: 493 RSFISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAG 552
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LV +G + F M R +G+ P EH TC+VDLLGRSG L++A I+ D WGAL
Sbjct: 553 LVCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGAL 612
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L A + E+GE AA L L P +L+N+YA +G+W ++ + E +
Sbjct: 613 LNASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSNMYAILGRWGQKTKLRKRLQSLELR 672
Query: 481 KSPGCSWI 488
K PGCSWI
Sbjct: 673 KDPGCSWI 680
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 33/378 (8%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR +FDQ+P +T W ++I + L + +++ L + MHR V + +FS+VL+
Sbjct: 57 LEEARHLFDQMPN-RTVSSWNTMISGYSLLGRYPEALTLVSFMHRSCVALNEVSFSAVLS 115
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
ACAR S L L S ER + SA++ +C ++ A+ +
Sbjct: 116 ACARSGSFLLG----------KQVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVF 165
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAK---- 227
+ + + N V W M+AGY K + +A +F+++ D W + +GYAK
Sbjct: 166 EELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLI-----SGYAKREDG 220
Query: 228 --AAIEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN 284
A++++ MR+ + V +E + + C +LG + ++ +G D N +
Sbjct: 221 CERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSIGG 280
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYS-SMITAFADHGKSQEALDMFLKMRNEGIE 343
A+ + C +D A R + + + ++ + S+I G+ +EA +F ++R E
Sbjct: 281 AVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYELR----E 336
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
N V++ ++ + G E + FE M+ + LT L M+ + ++G+L++A
Sbjct: 337 TNPVSYNLMIKGYAMSGQFEKSKRLFEKMSP----ENLTS-LNTMISVYSKNGELDEAVK 391
Query: 404 LIMDYKDFCDAGTWGALL 421
L K + +W +++
Sbjct: 392 LFDKTKGERNYVSWNSMM 409
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A ++FD+ + W S++ ++++ +++++ LY M RL V S TFS +
Sbjct: 386 LDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLSVDYSRSTFSVLFR 445
Query: 112 ACA-----RVPSLLE----------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
AC+ R LL A++ Y+K G + +AQR F S+ NV +
Sbjct: 446 ACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAA 505
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVF 202
W+A++ GYA G A + M + N+ T+V +++ G V E ++F
Sbjct: 506 WTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIF 561
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 127/301 (42%), Gaps = 20/301 (6%)
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
IA K G++ EA+ +FD++ S W M Y G A+ + M + V ++E
Sbjct: 48 IAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMHRSCVALNE 107
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
V+ +SAC + G + + + + +R V +AL++ C + A F
Sbjct: 108 VSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEE 167
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+++ + + +S M+ + +A+DMF KM + + T S EDG
Sbjct: 168 LRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDV-------VAWTTLISGYAKREDG 220
Query: 366 CKQ----FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA---HSL-IMDYKDFCDAGTW 417
C++ F M R + P L C+V + R G L H L I DF D
Sbjct: 221 CERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDF-DNSIG 279
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSA-LLANIYASMGKWKDSEIVKMMISE 476
GA+ + + E + A R +G + + N A L S G+ +++E+V + E
Sbjct: 280 GAV---TEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYELRE 336
Query: 477 T 477
T
Sbjct: 337 T 337
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
+N I K G L+ A F ++ N+ V S+++MI+ ++ G+ EAL + M +
Sbjct: 44 TNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMHRSCV 103
Query: 343 EPNQVTFIGVLTACSHGG 360
N+V+F VL+AC+ G
Sbjct: 104 ALNEVSFSAVLSACARSG 121
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 239/438 (54%), Gaps = 15/438 (3%)
Query: 54 YARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
YA +F + FL+ ++IR L SI L+ ++ + ++F L A
Sbjct: 61 YAYSLFTSLTHPPNIFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAV 120
Query: 114 ARVPSLLEAVICGYTKIGLMDDAQRL-FDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
R+ + TK GL +Q + F + +V+ +++ Y++ ++ A++ +D
Sbjct: 121 IRLSA---------TKTGLQFHSQAIRFGLHSHLHVLV--SLIRMYSS-SHISDARKLFD 168
Query: 173 --RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+T +N W AM+ Y K ++ A+ +FD + + + W A+ Y AI
Sbjct: 169 GIPLTARNVALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAI 228
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+++ M+ +NV E+ ++ +SAC QLG +E+ + ++D R + NALI M+
Sbjct: 229 AIFRTMQLQNVVPDEITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMY 288
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+K G + A F +K+K ++++++MI A HG +AL+MF +M + ++PN++TFI
Sbjct: 289 AKSGNIKRALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFI 348
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
VL+ACSH GLV+ F M + I+P EH CM+DLLGR+G L++A L+
Sbjct: 349 AVLSACSHVGLVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPF 408
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
+A WG+LL A H +A LGE +HL+EL P +GN ALL+NIYAS+G+WK S IV
Sbjct: 409 EPNAAIWGSLLAASYTHGDAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIV 468
Query: 471 KMMISETEKKKSPGCSWI 488
+ M+ + KK PG S+I
Sbjct: 469 RKMMRDRGVKKIPGGSFI 486
>gi|147846621|emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
Length = 496
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 207/362 (57%), Gaps = 5/362 (1%)
Query: 88 ILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERN 147
I LYA LG F S R A+I GY K G M A+ +FD M R+
Sbjct: 41 IHLYANGKDLGAAKQLFNLCS-----DRDLVSWNAMIDGYVKRGEMGHARMVFDRMVCRD 95
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
VISW+ M+ GYA G + AK +D M E+N V+ +M+ G+ KCG V +A +F E+
Sbjct: 96 VISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSXNSMLXGFVKCGNVEDAFGLFSEMPC 155
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W +M CY Q G A+ ++ M V+ SE +V +SAC LG ++ L
Sbjct: 156 RDVVSWNSMLACYAQCGKPNEALALFDQMXAVGVKPSEATVVSLLSACAHLGALDKGLHL 215
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
++++ + + V AL+ M++KCG + LA + F+ +++KDV++++++I A G
Sbjct: 216 HTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAILGHV 275
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+EA +F +M+ G+EPN +TF+ +L+ACSH G+V++G K + M+ +GI+P EH C
Sbjct: 276 KEAQQLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGC 335
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
++DLL R+G LE+A LI + GALLG C++H N ELGE+ + L+ L P +
Sbjct: 336 VIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCQ 395
Query: 448 TG 449
+G
Sbjct: 396 SG 397
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 119/251 (47%), Gaps = 34/251 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ A +F ++P C+ W S++ + +++ L+ +M +GV S T S+L
Sbjct: 142 NVEDAFGLFSEMP-CRDVVSWNSMLACYAQCGKPNEALALFDQMXAVGVKPSEATVVSLL 200
Query: 111 NACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA + +L + A++ Y K G + A ++F++M ++V+
Sbjct: 201 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVL 260
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+W+ ++AG A G++K A++ + M E N +T+VAM++ G V E +K+ D +
Sbjct: 261 AWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCM 320
Query: 206 S-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
S EP + + + G + A+E+ M E + A++G C G+
Sbjct: 321 SSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLG---GCRIHGN 377
Query: 261 VEMAAILAKHV 271
E+ ++ K +
Sbjct: 378 FELGEMVGKRL 388
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 237/436 (54%), Gaps = 11/436 (2%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++F+++ + K W++LI + + + ++++++ +M+ G+ SVL+ACA
Sbjct: 257 AWKLFNEMDE-KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACA 315
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
L V G GL + E V +A++ Y+ G + A++ ++
Sbjct: 316 H----LSIVKTGKMIHGL------VIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGS 365
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+ ++W +MI+G KCG V +A+ +FD + E D W+A+ Y Q+ + ++
Sbjct: 366 HNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFH 425
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ +R E +V ISACT L ++ + ++ + + L+ M+ KCG
Sbjct: 426 EMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCG 485
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
++ A F+ ++ K V S++++I A +G + +LDMF +M+N G+ PN++TF+GVL
Sbjct: 486 CVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLG 545
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
AC H GLV++G F M GI+P +H CMVDLLGR+G L +A LI D
Sbjct: 546 ACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDV 605
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
TWGALLGACK H + E+GE R L+EL P+ G LL+NI+AS G W+D V+ M+
Sbjct: 606 ATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMM 665
Query: 475 SETEKKKSPGCSWISS 490
+ K+PGCS I +
Sbjct: 666 KQQGVVKTPGCSLIEA 681
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 207/437 (47%), Gaps = 63/437 (14%)
Query: 43 RLLQLPGDN----LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG 98
RLL+ D+ L Y+ Q+FD+I F+W +++R ++ +++LLY M +
Sbjct: 78 RLLKFSTDSPFIGLDYSLQIFDRIEN-SNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNN 136
Query: 99 VLTSGFTFSSVLNACARVPSLLE-----------------------AVICGYTKIGLMDD 135
V +T+ V+ ACA LLE +I Y G M D
Sbjct: 137 VGPDNYTYPLVVQACA--VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRD 194
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A++LFD + +SW++++AGY G+++ AK +D+M ++N V +MI GK G+V
Sbjct: 195 ARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQV 254
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
EA K+F+E+ E D W+A+ Y QNG + A+ M+ M +R+ EV +V +SAC
Sbjct: 255 MEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC 314
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS------------------------ 291
L V+ ++ V + + NALIHM+S
Sbjct: 315 AHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWN 374
Query: 292 -------KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
KCG ++ A F + KD++S+S++I+ +A H E L +F +M+ I P
Sbjct: 375 SMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRP 434
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
++ + V++AC+H ++ G K R G+K T ++D+ + G +E A +
Sbjct: 435 DETILVSVISACTHLAALDQG-KWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEV 493
Query: 405 IMDYKDFCDAGTWGALL 421
++ +W AL+
Sbjct: 494 FNGMEE-KGVSSWNALI 509
>gi|255560453|ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539509|gb|EEF41097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 662
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 253/499 (50%), Gaps = 70/499 (14%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR-----LGVLTSGFTFSSVLNA 112
+F+ +P+ K W +++ + + ++I + +M L L SG +S L+
Sbjct: 165 LFNTMPE-KNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQNSELDQ 223
Query: 113 CARVPSLLE----------------AVICGYTKIGLMDDAQRLFDSMA------------ 144
R+ LL+ +I GY + G +D+AQ LFD +
Sbjct: 224 AERI--LLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGR 281
Query: 145 -ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFD 203
ERNV+SW+ M+ Y G++ +A++ +D+M +++S +W MI+GY ++ EA +F
Sbjct: 282 FERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFH 341
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM---------VGAISA 254
++ PD W M Y Q+G + A + ++ M Q+N+ + +GAI+
Sbjct: 342 KMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAINL 401
Query: 255 CTQLG----------------------DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
Q+ D+++ + + V + ++NALI M+S+
Sbjct: 402 FIQMQVEGEKSDRHTLSSLLSVSSGIVDLQLGMQIHQLVSKTVIPDVP-LNNALITMYSR 460
Query: 293 CGYLDLAWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
CG + A F +K K+VIS+++MI +A HG + EAL++F MR+ ++P +TFI
Sbjct: 461 CGAIFEARTIFYEMKLQKEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYITFIS 520
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL AC+H GLVE+G + FE M +G++P EH +VD++GR GQLE+A LI
Sbjct: 521 VLNACAHAGLVEEGRRIFESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSMTIE 580
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D WGALLGA +VH N E+ +AA L++L P+ + LL N+Y +G+W ++ ++
Sbjct: 581 PDKAVWGALLGASRVHNNVEMARVAAEALMKLEPDSSVPYILLYNMYVDVGQWDNAAEIR 640
Query: 472 MMISETEKKKSPGCSWISS 490
M+ KK SW+ S
Sbjct: 641 SMMERNNIKKEAAISWVDS 659
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 74/376 (19%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS---- 179
I +T+ G +++A+ LFD + RN ++W++M++GY G M A++ +D M E++
Sbjct: 54 ISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWN 113
Query: 180 ------------------------------VTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
V+W MI+GY K G + EA +F+ + E +
Sbjct: 114 LIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLFNTMPEKN 173
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
+ W AM ++QNG AIE +K M + +V S A+V + ++L E +L
Sbjct: 174 SVSWNAMVSGFLQNGDVVRAIEFFKRMPERDV-TSLSALVSGLIQNSELDQAE-RILLDY 231
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK-------------NKDVISYSS 316
+ G + + N LI + + G +D A F +I ++V+S+++
Sbjct: 232 GNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNT 291
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI + G A +F +M + + ++ +++ H +E+ F M
Sbjct: 292 MIMCYVKAGDVISARKLFDQMPDR----DSFSWNTMISGYVHVLDMEEASNLFHKMP--- 344
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTW----------GALLGAC 424
P T M+ +SG LE AH M K+ +W G +GA
Sbjct: 345 --SPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLV---SWNSVIAGYEKNGDYIGAI 399
Query: 425 KVHVNAEL-GEIAARH 439
+ + ++ GE + RH
Sbjct: 400 NLFIQMQVEGEKSDRH 415
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 37/337 (10%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
++ AR +FD++ + T W S+I +V ++ L+ +M V++ S ++
Sbjct: 63 INEARALFDKLERRNT-VTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNLIISGYVS 121
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
+ +++ + LFD M ER +SW+ M++GYA G M A +
Sbjct: 122 CRGK---------------RFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLF 166
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+ M EKNSV+W AM++G+ + G+V A + F + E D + +A+ +QN A
Sbjct: 167 NTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSGLIQNSELDQAER 226
Query: 232 MYKVMRQENVRISEVAMVGA----ISACTQLGDVEMAAILAKHV----DEGCCDRT---- 279
+ ++ N S+ +V A I+ Q G V+ A L + D+G RT
Sbjct: 227 I--LLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKG-RTGRFE 283
Query: 280 -NYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
N VS N +I + K G + A + F ++ ++D S+++MI+ + +EA ++F KM
Sbjct: 284 RNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKM 343
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+ P+ +++ +++ + G +E FE M +
Sbjct: 344 PS----PDTLSWNLMISGYAQSGSLELAHDFFERMPQ 376
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 135/324 (41%), Gaps = 67/324 (20%)
Query: 142 SMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKV 201
S+ + N+ S + ++ + G + A+ +D++ +N+VTW +MI+GY K GE+ +A+K+
Sbjct: 41 SVEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKL 100
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
FDE+ E D W + YV +C +
Sbjct: 101 FDEMPERDVVSWNLIISGYV--------------------------------SCRGKRFI 128
Query: 262 EMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
E L + E CC VS N +I ++K G +D A F+ + K+ +S+++M++
Sbjct: 129 EEGRNLFDKMPERCC-----VSWNTMISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSG 183
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG--- 377
F +G A++ F +M + L+A G + Q E + +G
Sbjct: 184 FLQNGDVVRAIEFFKRMPERDVTS--------LSALVSGLIQNSELDQAERILLDYGNNG 235
Query: 378 --IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG------------TWGALLGA 423
+ L ++ G+ G++++A +L + D G +W ++
Sbjct: 236 GSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMI-M 294
Query: 424 CKVHVNAELGEIAARHLLELGPEK 447
C V I+AR L + P++
Sbjct: 295 CYVKAG---DVISARKLFDQMPDR 315
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +F ++ K W ++I + H + +++ L+ M V + TF SVLNACA
Sbjct: 467 ARTIFYEMKLQKEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYITFISVLNACA 526
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSM-----AERNVISWSAMVAGYANCGNMKAAKE 169
GL+++ +R+F+SM E V ++++V G ++ A +
Sbjct: 527 HA--------------GLVEEGRRIFESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALD 572
Query: 170 FYDRMT-EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS--EPDASC-WAAMTVCYVQNGY 225
+ MT E + W A++ V A+ + + EPD+S + + YV G
Sbjct: 573 LINSMTIEPDKAVWGALLGASRVHNNVEMARVAAEALMKLEPDSSVPYILLYNMYVDVGQ 632
Query: 226 AKAAIEMYKVMRQENVR 242
A E+ +M + N++
Sbjct: 633 WDNAAEIRSMMERNNIK 649
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 262/513 (51%), Gaps = 37/513 (7%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S++ Q K++H+ L T + +++ A LI L G LS AR++FD+IP+
Sbjct: 42 SRSLQQGKKLHALLT---TNGYVRFNLIASNLITLYTTCG-QLSIARKLFDKIPQTNIH- 96
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG--FTFSSVLNACARVPSLL------- 120
W +LI ++ ++++M L S F SVL AC V +
Sbjct: 97 RWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHC 156
Query: 121 --------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
A+I Y+K G + DA+++FD M +++++ +A+V+GYA G
Sbjct: 157 LVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNE 216
Query: 167 AKEFYDRM----TEKNSVTWVAMIAGYG-KCGE--VREAKKVFDEIS-EPDASCWAAMTV 218
A + M N VTW A+I+G+ KC V E ++ +E EPD W ++
Sbjct: 217 ALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLS 276
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
+VQN + A + +K M + + + AC V + + +
Sbjct: 277 GFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVED 336
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
YV +AL+ M++KCG++ A F ++ K+ ++ +SMI +A+HG +EA+++F +M
Sbjct: 337 DLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQME 396
Query: 339 NEGIEP-NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
EG+ + +TF LTACSH G +E G + F++M + I+P EH CMVDL GR+G+
Sbjct: 397 MEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGK 456
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
LE+A+ +I D WGALL AC+ H + EL E+AA+HL EL PE GN LL+++
Sbjct: 457 LEEAYGIIKSMPVKPDLFVWGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSL 516
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
YA G W E +K I + + +K G SWI +
Sbjct: 517 YADAGTWGKVERIKRRIKKGKLRKLQGLSWIDN 549
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 164/573 (28%), Positives = 276/573 (48%), Gaps = 101/573 (17%)
Query: 14 NQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPKCKTQFLWT 72
+ ++ +H+ ++KT H+ + ++ L + P D YA VFD I + +W
Sbjct: 2 SSVRXIHAQMIKT--GLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQE-PNLLIWN 58
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLG------------------------------VLTS 102
++ R H L + ++ LY M LG VL
Sbjct: 59 TMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKL 118
Query: 103 GFTF-----SSVLNACARVPSLLEA-----------------VICGYTKIGLMDDAQRLF 140
GF +S+++ A+ L +A +I GY G ++ AQ+LF
Sbjct: 119 GFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLF 178
Query: 141 DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV-------------------- 180
D + ++V+SW+AM++GY GN K A E + M +V
Sbjct: 179 DEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSI 238
Query: 181 -------TWV-------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
+W+ A+I Y K GEV A ++FD + D W + Y
Sbjct: 239 ELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGY 298
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE---GCCD 277
K A+ +++ M + ++V M+ + AC LG +++ + ++++ G
Sbjct: 299 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVT 358
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREF-SRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+ + +LI M++KCG +D A + F S + N+ + ++++MI+ FA HG++ A D+F +
Sbjct: 359 NVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSR 418
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
MR GIEP+ +TF+G+L+ACSH G+++ G F MTR + I P EH CM+DLLG SG
Sbjct: 419 MRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSG 478
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLAN 456
++A +I D W +LL ACK+H N ELGE A+ L+++ P +G+ LL+N
Sbjct: 479 LFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSN 538
Query: 457 IYASMGKWKDSEIVKMMISETE-KKKSPGCSWI 488
IYA+ G+W + ++ ++++ KKK PGCS I
Sbjct: 539 IYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSI 571
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 234/424 (55%), Gaps = 18/424 (4%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---LLEAVICGY 127
WTS I A ++ +A M GV + TF ++L+ C PS L ++ GY
Sbjct: 14 WTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGSETLGDLLHGY 73
Query: 128 T-KIGLMDDAQRLFDSMAERN-VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
K+GL +RN V+ +A++ Y+ G +K A+ +D M +KNSVTW M
Sbjct: 74 ACKLGL------------DRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTM 121
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I GY + G+V A K+FD++ EPD W AM +V+ G+ + A+ ++ M+ V+
Sbjct: 122 IDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDY 181
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
VA++ A++ACT LG + + + ++V VSN+LI ++ +CG ++ A F +
Sbjct: 182 VAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDK 241
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
++ + V+S++S+I FA +G + E+L F KM+ EG +PN VTF G LTACSH GLV++G
Sbjct: 242 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEG 301
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F+ M R + I P EH C+VDL R+G+LE A ++ + G+LL AC+
Sbjct: 302 LRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACR 361
Query: 426 VH-VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
H N L E +HL +L + N +L+N+YA+ KW+ + ++ + KK PG
Sbjct: 362 NHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLKKQPG 421
Query: 485 CSWI 488
S I
Sbjct: 422 FSSI 425
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ +AR+VFD++ K +T W S+I + + +S++ + KM G + TF+ L
Sbjct: 232 VEFAREVFDKMEK-RTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALT 290
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKA 166
AC+ V GL+D+ R F SM IS + +V Y+ G ++
Sbjct: 291 ACSHV--------------GLVDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLED 336
Query: 167 AKEFYDRMTEK-NSVTWVAMIA 187
A + M K N V +++A
Sbjct: 337 ALKVVQSMPMKPNEVVIGSLLA 358
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
++S++S IT EA F MR G+EP +TFI +L+ C G G +
Sbjct: 11 IVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGC---GDFPSGSETLG 67
Query: 371 LMTRVFGIKPLTE--HLTCMVDLLG---RSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ + K + H+ +LG + G+++KA L+ DY D ++ TW ++
Sbjct: 68 DLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKAR-LVFDYMDDKNSVTWNTMI 122
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 164/496 (33%), Positives = 250/496 (50%), Gaps = 63/496 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNAC 113
A +VF++ + T LWTS++ + + +++ L+++M + V+ T SV++AC
Sbjct: 158 ALKVFEEFQRPDT-VLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSAC 216
Query: 114 ARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
A++ + L+ +++ Y K G A LF M E++VISWS
Sbjct: 217 AQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWS 276
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEK----NSVTWV------------------------- 183
M+A YAN A + M EK NSVT V
Sbjct: 277 TMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWK 336
Query: 184 ----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A+I Y KC EA +F + + D W A+ Y QNG A ++ ++
Sbjct: 337 GFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVF 396
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M + ++ VA+V ++A ++LG + A L +V + +V +LI ++SKC
Sbjct: 397 RNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKC 456
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTFIGV 352
G L A + F + +DV+ +SSMI A+ HG+ EAL++F +M +N + PN VTF+ +
Sbjct: 457 GSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSI 516
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+ACSH GLVE+G K F+ M + ++P +EH MVDLLGR GQL KA +I
Sbjct: 517 LSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPA 576
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
WGALLGAC++H N E+GE AA++L L P G LL+NIYA GKW + ++
Sbjct: 577 GPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRT 636
Query: 473 MISETEKKKSPGCSWI 488
I E KK G S +
Sbjct: 637 RIKERGLKKMFGQSMV 652
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 198/401 (49%), Gaps = 39/401 (9%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK--------- 177
Y +D A +F+ + W+ M+ G+A G ++ E Y +M EK
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821
Query: 178 ------------------------------NSVTWVAMIAGYGKCGEVREAKKVFDEISE 207
+ A++ Y KCG++ A+ VFD+++
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV 881
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D W +M Y NGY + + +MR V + V+++ + AC LG +
Sbjct: 882 RDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWF 941
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
+V + + V+ A++ M+SKCG LDLA F KD++ +S+MI ++ HG
Sbjct: 942 HSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHG 1001
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
++A+D+F +M G+ P+ VTF VL+ACSH GL+E+G F+LMT F I + C
Sbjct: 1002 RKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYAC 1061
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
MVDLLGR+GQL +A LI + DA WG+LLGAC++H N +L E A HL L P
Sbjct: 1062 MVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVH 1121
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
G LL+NIYA+ +W + E V+ M++ K G S +
Sbjct: 1122 AGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLV 1162
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 164/357 (45%), Gaps = 53/357 (14%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGD--NLSYARQVFDQIPKCKTQFLWTS 73
+ Q+HS + KT HD + F +L L +L AR+VFD+ P LW S
Sbjct: 20 VSQLHSQVFKT-GILHDTF-----FATKLNSLYAKCASLQAARKVFDETPHPNVH-LWNS 72
Query: 74 LIRNHVLHAHFRQSILLYAKMH-RLGVLTSGFTFSSVLNACARVPSL-LEAVICGYTKIG 131
+R++ + +++ L+ M G FT L ACA + L L VI G+ K
Sbjct: 73 TLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAK-- 130
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
+N S M G A ++ Y K
Sbjct: 131 --------------KNDEIGSDMFVGSA-------------------------LVELYSK 151
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM-RQENVRISEVAMVG 250
CG++ EA KVF+E PD W +M Y QN + A+ ++ M + V + V +V
Sbjct: 152 CGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVS 211
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+SAC QL +V+ + + V D + N+L+++++K G +A FS++ KD
Sbjct: 212 VVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKD 271
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
VIS+S+MI +A++ + EAL++F +M + EPN VT + L AC+ +E+G K
Sbjct: 272 VISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK 328
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 145/367 (39%), Gaps = 94/367 (25%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+ + A VF+ IP FLW +IR F S+ LY+KM G+ F F
Sbjct: 766 NRIDAASIVFEDIPN-PCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFA 824
Query: 110 LNACARVPSLLEA-------VICG--------------YTKIGLMDDAQRLFDSMAERNV 148
L +CA + L V CG Y K G ++ A+ +FD MA R++
Sbjct: 825 LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT----------------------W---- 182
+SW++M++GYA+ G F+D M + W
Sbjct: 885 VSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSY 944
Query: 183 -------------VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
A++ Y KCG + A+ +FDE + D CW+AM Y +G+ + A
Sbjct: 945 VIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKA 1004
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
I+++ M + VR S V +SAC+ G +E +
Sbjct: 1005 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKM----------------------- 1041
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
Y L EF + + + +Y+ M+ G+ EA+D+ + N +EP+ +
Sbjct: 1042 -----YFQLMTEEF--VIARKLSNYACMVDLLGRAGQLSEAVDL---IENMPVEPDASIW 1091
Query: 350 IGVLTAC 356
+L AC
Sbjct: 1092 GSLLGAC 1098
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM------RQENVR 242
Y KC ++ A+KVFDE P+ W + Y + + + ++ +M +N
Sbjct: 46 YAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFT 105
Query: 243 ISEVAMVGAISACTQLGDVEMAAIL---AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
I A+ AC L +E+ ++ AK DE D +V +AL+ ++SKCG + A
Sbjct: 106 IPI-----ALKACAGLRMLELGKVIHGFAKKNDEIGSDM--FVGSALVELYSKCGQMGEA 158
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTFIGVLTACSH 358
+ F + D + ++SM+T + + +EAL +F +M + + + VT + V++AC+
Sbjct: 159 LKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQ 218
Query: 359 GGLVEDG-CKQFELMTRVF-GIKPLTEHLTCMVDLLGRSG 396
V+ G C ++ R F G PL L ++L ++G
Sbjct: 219 LLNVKAGSCVHGLVIRREFDGDLPLVNSL---LNLYAKTG 255
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 43/175 (24%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L AR +FD+ K W+++I ++ +H H R++I L+ +M + GV S TF+ VL
Sbjct: 969 SLDLARCLFDETAG-KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVL 1027
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+AC+ GL+++ + F M E VI+
Sbjct: 1028 SACSHS--------------GLLEEGKMYFQLMTEEFVIA-------------------- 1053
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMT-VCYVQN 223
+ + M+ G+ G++ EA + + + EPDAS W ++ C + N
Sbjct: 1054 ------RKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHN 1102
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 252/497 (50%), Gaps = 65/497 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++F+ +P K WT+L+ + +A ++++ L+ M + G+ + SS+L +CA
Sbjct: 303 AHKLFNGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L ++I Y K + DA+++FD A +V+ ++A
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNA 421
Query: 154 MVAGYANCGNM----KAAKEFYD---RMTEKNSVTWV----------------------- 183
M+ GY+ G +A F D R+ + +T+V
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 184 ------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
A+I Y C +++++ VFDE+ D W +M YVQ + A+
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALN 541
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ ++ R E ++A L V++ + + + Y++NAL+ M++
Sbjct: 542 LFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYA 601
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG + A + F ++DV+ ++S+I+++A+HG+ ++AL M KM +EGIEPN +TF+G
Sbjct: 602 KCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVG 661
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+ACSH GLVEDG KQFELM R FGI+P TEH CMV LLGR+G+L KA LI
Sbjct: 662 VLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTK 720
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
A W +LL C N EL E AA + P+ +G+ +L+NIYAS G W +++ V+
Sbjct: 721 PAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVR 780
Query: 472 MMISETEKKKSPGCSWI 488
+ K PG SWI
Sbjct: 781 ERMKVEGVVKEPGRSWI 797
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 59/348 (16%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+ S+L+K+ D+ Y LI L N+ YAR VFD +P+ K+ WT++I
Sbjct: 169 QLQSFLVKS---GFDRDVYVGTLLIDFY-LKDGNIDYARLVFDALPE-KSTVTWTTMISG 223
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-----LEAVICGYTKIGL 132
V S+ L+ ++ V+ G+ S+VL+AC+ +P L + A I Y GL
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY---GL 280
Query: 133 MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKC 192
DA + + ++ Y CG + AA + ++ M KN ++W +++GY
Sbjct: 281 EMDASLM------------NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK-- 326
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
QN K A+E++ M + ++ A +
Sbjct: 327 -----------------------------QNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
++C L + + + + +YV+N+LI M++KC L A + F DV+
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 313 SYSSMITAFADHGKS---QEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
+++MI ++ G EAL++F MR I P+ +TF+ +L A +
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +R VFD++ K K +W S+ +V + +++ L+ ++ FTF++++
Sbjct: 505 LKDSRLVFDEM-KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 112 ACARV---------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
A + P + A++ Y K G +DA + FDS A R+V+
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI- 205
W+++++ YAN G K A + ++M E N +T+V +++ G V + K F+ +
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 206 ---SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
EP+ + M + G A E+ + M + I ++ +S C + G+VE
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL---LSGCAKAGNVE 740
Query: 263 MA------AILAKHVDEG 274
+A AIL+ D G
Sbjct: 741 LAEHAAEMAILSDPKDSG 758
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 9/246 (3%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAM-TVCYVQNGYAKAAIEMYKVMRQENVRI 243
+I Y + G + A+KVF+++ E + W+ M + C Y ++ + + R
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 244 SEVAMVGAISACTQLGDVE--MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+E + I AC+ L M L + + DR YV LI + K G +D A
Sbjct: 145 NEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARL 204
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F + K +++++MI+ G+S +L +F ++ + + P+ VL+ACS
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPF 264
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGA 419
+E G KQ +G++ + ++D + G++ AH L M K+ +W
Sbjct: 265 LEGG-KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII---SWTT 320
Query: 420 LLGACK 425
LL K
Sbjct: 321 LLSGYK 326
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RN 339
Y+SN LI+++S+ G + A + F ++ ++++S+S+M++A HG +E+L +FL+ R
Sbjct: 80 YLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRT 139
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQ---FELMTRVF--GIKPLTEHLTCMVDLLGR 394
PN+ + ACS GL DG + F+L + + G T ++D +
Sbjct: 140 RKDSPNEYILSSFIQACS--GL--DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G ++ A L+ D TW ++ C
Sbjct: 196 DGNIDYAR-LVFDALPEKSTVTWTTMISGC 224
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 244/498 (48%), Gaps = 62/498 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++YA + F ++ + LW ++I+ + I +Y M V + FTF VL
Sbjct: 49 DVNYAHKAFREVSEPDI-LLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 111 NACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC + +++ Y K G + A+ +FD + +R V+
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKN-SVTWVAMIA--------------------- 187
SW+++++GY G+ A + M + N W+A+++
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227
Query: 188 -----------------GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
Y K G V A+ F+ + +P+ W AM Y NGY + AI
Sbjct: 228 TKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAI 287
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++++ M +N+R+ + M A+ A Q+G +E+A L ++ + +V+ LI M+
Sbjct: 288 KLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMY 347
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG + LA F R+ +KDV+ +S MI + HG QEA+ ++ +M+ G+ PN TFI
Sbjct: 348 AKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFI 407
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
G+LTAC + GLV++G + F LM GI+P +H +C+VDLLGR+G L +A+ IM
Sbjct: 408 GLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPI 466
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
WGALL ACK+H LGEIAA L L P TG+ L+N+YAS W V
Sbjct: 467 KPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANV 526
Query: 471 KMMISETEKKKSPGCSWI 488
++M+++ K G S I
Sbjct: 527 RLMMTQKGLNKDLGHSSI 544
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 131/288 (45%), Gaps = 14/288 (4%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G+V A K F E+SEPD W A+ Y Q A I MY M+ V + + +
Sbjct: 48 GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVL 107
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
AC + + + +V N+L+ M++K G + A F ++ ++ V+
Sbjct: 108 KACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVV 167
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++S+I+ + +G EAL++F +MR ++P+ + + V+TA ++ + G L+
Sbjct: 168 SWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLV 227
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
T++ G++ + + + + + G +E A + + + W A++ + N
Sbjct: 228 TKL-GLEFEPDIVISLTTMYAKRGLVEVA-RFFFNRMEKPNLILWNAMISG---YANNGY 282
Query: 433 GEIAARHLLELGPEK------TGNSALLANIYAS---MGKWKDSEIVK 471
GE A + E+ + T SA+LA+ + +W D I K
Sbjct: 283 GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK 330
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 228/421 (54%), Gaps = 5/421 (1%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
++ L +LIR H + ++ LYA + R G+ + T S+L + A P+ +
Sbjct: 51 RSAELHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPA-----VP 105
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
G ++ L A + +A +++ + + G + A ++ T+ +
Sbjct: 106 GARRLALAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTL 165
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I + + G V +A+ +FDE+ E +A W+AM YVQ G + A+ ++ M+ + VR +
Sbjct: 166 ITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDD 225
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+VG ++AC QLG +E + ++ T ++ AL+ M++KCG + L F
Sbjct: 226 TVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEG 285
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+K+K+V+++++MI A HG+ ++L +F +M + G++P+ + FIG L AC+H GLV+ G
Sbjct: 286 MKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKG 345
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F M +GIKP EH CMVDLL R+G L +A ++ DA WGAL+ C+
Sbjct: 346 RELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCR 405
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
H N EL E +H +EL P+K+G LL NIY++ G+ + ++ ++ E +K+PGC
Sbjct: 406 FHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGC 465
Query: 486 S 486
S
Sbjct: 466 S 466
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 247/492 (50%), Gaps = 62/492 (12%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
+F+++P+ K W ++I + +F++++ + M R G + T ++ +++CAR+
Sbjct: 163 LFNEMPE-KDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLL 221
Query: 118 SL----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
L L++ I Y K G ++ A +F+ M ++ V++W++M++
Sbjct: 222 DLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMIS 281
Query: 157 GYANCGNMKAAKEFYDRM----------------------------------TEKNSVTW 182
GY G+ + + + RM T +N +
Sbjct: 282 GYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQS 341
Query: 183 VAMIAG-----YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
I Y KCG+V A+ +F I + W M YV G A+ ++ MR
Sbjct: 342 DVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMR 401
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
+ V + ++AC+QL +E + + E D V AL+ M++KCG +D
Sbjct: 402 KSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVD 461
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A+ F + +D++S++SMITA+ HG++ AL++F +M ++P++VTF+ +L+AC
Sbjct: 462 EAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACG 521
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF-CDAGT 416
H GLV++GC F M V+GI P EH +C++DLLGR+G+L +A+ ++ + D
Sbjct: 522 HAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVEL 581
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
L AC++H N +LG AR L++ P+ + LL+N+YAS KW + +V+ + E
Sbjct: 582 LSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKE 641
Query: 477 TEKKKSPGCSWI 488
KK+PGCSWI
Sbjct: 642 LGLKKNPGCSWI 653
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 181/408 (44%), Gaps = 59/408 (14%)
Query: 105 TFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
F ++ N C SL ++ GYTK + +A LF+ + + + Y +
Sbjct: 60 VFDNMENPCE--ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDS----YTYPSVL 113
Query: 165 KAAKEFYDRMTEK-------------NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
KA Y + K + V +++ Y KC +A +F+E+ E D +
Sbjct: 114 KACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVA 173
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
CW + CY Q+G K A+E + +MR+ + V + AIS+C +L D+ + + +
Sbjct: 174 CWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEEL 233
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+++S+AL+ M+ KCG+L++A F ++ K V++++SMI+ + G S +
Sbjct: 234 INSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCI 293
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG-------------------------- 365
+F +M NEG++P T ++ CS + +G
Sbjct: 294 QLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLY 353
Query: 366 --CKQFELMTRVFGIKPLTEHLTCMVDLLGR--SGQLEKAHSLIMDYKDF---CDAGTWG 418
C + EL +F + P ++ ++ V + G G+L +A L + + DA T+
Sbjct: 354 FKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFT 413
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSAL----LANIYASMG 462
++L AC E GE ++E +K N+ + L ++YA G
Sbjct: 414 SVLTACSQLAALEKGEEIHNLIIE---KKLDNNEVVMGALLDMYAKCG 458
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 148/366 (40%), Gaps = 93/366 (25%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A +VF+Q+PK KT W S+I + L I L+ +M+ GV + T SS++
Sbjct: 257 HLEMAIEVFEQMPK-KTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLI 315
Query: 111 NACARVPSLLEA-VICGYT--------------------KIGLMDDAQRLFDSMAERNVI 149
C+R LLE + GYT K G ++ A+ +F + + V+
Sbjct: 316 MVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVV 375
Query: 150 SWSAMVAGYANCGNMKAA-----------------------------------KEFYDRM 174
SW+ M++GY G + A +E ++ +
Sbjct: 376 SWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLI 435
Query: 175 TEK----NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
EK N V A++ Y KCG V EA VF + + D W +M Y +G A A+
Sbjct: 436 IEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVAL 495
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
E++ M Q N++ V + +SAC G VDEGC Y N +++++
Sbjct: 496 ELFAEMLQSNMKPDRVTFLAILSACGHAG----------LVDEGC-----YYFNQMVNVY 540
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
R+++ YS +I G+ EA ++ +N I +
Sbjct: 541 GI----------IPRVEH-----YSCLIDLLGRAGRLHEAYEIL--QQNPEIRDDVELLS 583
Query: 351 GVLTAC 356
+ +AC
Sbjct: 584 TLFSAC 589
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 36/260 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +F IPK K W +I +V +++ L+++M + V TF+SVL AC+
Sbjct: 362 AENIFKLIPKSKV-VSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACS 420
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
++ +L + A++ Y K G +D+A +F + +R+++SW++
Sbjct: 421 QLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTS 480
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKN----SVTWVAMIAGYGKCGEVREAKKVFDEISE-- 207
M+ Y + G A E + M + N VT++A+++ G G V E F+++
Sbjct: 481 MITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVY 540
Query: 208 ---PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI-SACTQLGDVEM 263
P ++ + G A E Y++++Q +V ++ + SAC ++++
Sbjct: 541 GIIPRVEHYSCLIDLL---GRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDL 597
Query: 264 AAILAKH-VDEGCCDRTNYV 282
A +A+ +D+ D + Y+
Sbjct: 598 GAEIARTLIDKDPDDSSTYI 617
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 249/492 (50%), Gaps = 62/492 (12%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
+F+++P+ K W ++I + +F+ ++ + M R G + T ++ +++CAR+
Sbjct: 163 LFNEMPE-KDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLL 221
Query: 118 SL----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
L L++ I Y K G ++ A +F+ M ++ V++W++M++
Sbjct: 222 DLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMIS 281
Query: 157 GYANCGNMKAAKEFYDRM---------TEKNSVTWV------------------------ 183
GY G++ + + + RM T +S+ V
Sbjct: 282 GYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQP 341
Query: 184 ------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
+++ Y KCG+V A+K+F I + W M YV G A+ ++ MR
Sbjct: 342 DVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMR 401
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
+ V + ++AC+QL +E + + E D V AL+ M++KCG +D
Sbjct: 402 KSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVD 461
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A+ F + +D++S++SMITA+ HG + AL++F +M ++P++V F+ +L+AC
Sbjct: 462 EAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACG 521
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF-CDAGT 416
H GLV++GC F M V+GI P EH +C++DLLGR+G+L +A+ ++ + D
Sbjct: 522 HAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVEL 581
Query: 417 WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISE 476
L AC++H N +LG AR L++ P+ + LL+N+YAS KW + +V+ + E
Sbjct: 582 LSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKE 641
Query: 477 TEKKKSPGCSWI 488
KK+PGCSWI
Sbjct: 642 LGLKKNPGCSWI 653
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 60/365 (16%)
Query: 84 FRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSM 143
+Q L++ K+ LG+ F +++N Y L D A+ +FD+M
Sbjct: 19 LKQGKLIHQKVVTLGLQNDIFLCKTLINQ--------------YLSCHLYDHAKCVFDNM 64
Query: 144 AERNVIS-WSAMVAGYANCGNMKAAKEFYDRMT-----EKNSVTWVA------------- 184
IS W+ ++AGY A E ++++ + +S T+ +
Sbjct: 65 ENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVL 124
Query: 185 ----------------------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
++ YGKC +A +F+E+ E D +CW + CY Q
Sbjct: 125 GKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQ 184
Query: 223 NGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
+G K A+E + +MR+ + V + AIS+C +L D+ + + + +++
Sbjct: 185 SGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
S+AL+ M+ KCG+L++A F ++ K V++++SMI+ + G + +F +M NEG+
Sbjct: 245 SSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGV 304
Query: 343 EPNQVTFIGVLTACSHGGLVEDG--CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
+P T ++ CS + +G + + R I+P + ++DL + G++E
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNR---IQPDVFVNSSLMDLYFKCGKVEL 361
Query: 401 AHSLI 405
A +
Sbjct: 362 AEKIF 366
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 151/366 (41%), Gaps = 93/366 (25%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A ++F+Q+PK KT W S+I + L I L+ +M+ GV + T SS++
Sbjct: 257 HLEMAIEIFEQMPK-KTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLI 315
Query: 111 NACARVPSLLEA-VICGYT--------------------KIGLMDDAQRLFDSMAERNVI 149
C+R LLE + GYT K G ++ A+++F + + V+
Sbjct: 316 MVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVV 375
Query: 150 SWSAMVAGYANCGNMKAA-----------------------------------KEFYDRM 174
SW+ M++GY G + A KE ++ +
Sbjct: 376 SWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLI 435
Query: 175 TEK----NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
EK N V A++ Y KCG V EA VF + + D W +M Y +G+A A+
Sbjct: 436 IEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGAL 495
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
E++ M Q NV+ VA + +SAC G VDEGC Y N +I+++
Sbjct: 496 ELFAEMLQSNVKPDRVAFLAILSACGHAG----------LVDEGC-----YYFNQMINVY 540
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
R+++ YS +I G+ EA ++ +N I +
Sbjct: 541 GI----------IPRVEH-----YSCLIDLLGRAGRLHEAYEIL--QQNPEIRDDVELLS 583
Query: 351 GVLTAC 356
+ +AC
Sbjct: 584 TLFSAC 589
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 138/306 (45%), Gaps = 40/306 (13%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
RS + K VH Y ++ +P + + L + A ++F IPK K
Sbjct: 320 RSARLLEGKFVHGYTIRNRIQPD----VFVNSSLMDLYFKCGKVELAEKIFKLIPKSKV- 374
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL--------- 119
W +I +V +++ L+++M + V + TF+SVL AC+++ +L
Sbjct: 375 VSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNL 434
Query: 120 ------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
+ A++ Y K G +D+A +F + +R+++SW++M+ Y + G+ A
Sbjct: 435 IIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGA 494
Query: 168 KEFYDRMTEKN----SVTWVAMIAGYGKCGEVREAKKVFDEISE-----PDASCWAAMTV 218
E + M + N V ++A+++ G G V E F+++ P ++ +
Sbjct: 495 LELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLID 554
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI-SACTQLGDVEMAAILAKH-VDEGCC 276
G A E Y++++Q +V ++ + SAC ++++ A +A+ +D+
Sbjct: 555 LL---GRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPD 611
Query: 277 DRTNYV 282
D + Y+
Sbjct: 612 DSSTYI 617
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 243/479 (50%), Gaps = 60/479 (12%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--RVPSLLEAV---- 123
LW ++ + L + +S ++ +M G+ + FT+ S+L C+ R L E +
Sbjct: 440 LWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQV 499
Query: 124 ---------------ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA- 167
I Y K+G +D A ++F + E++V+SW+AM+AGYA A
Sbjct: 500 LKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEAL 559
Query: 168 ---KEFYDRMTEKNSVTWV-----------------------------------AMIAGY 189
KE D+ +++ + A+++ Y
Sbjct: 560 NLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLY 619
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
+CG+VR+A FD+I D W ++ + Q+G+ + A+ ++ M + I+
Sbjct: 620 ARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFG 679
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
A+SA + +V++ + + + D VSN LI +++KCG +D A R+F + K
Sbjct: 680 PAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEK 739
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+ IS+++M+T ++ HG +AL +F M+ G+ PN VTF+GVL+ACSH GLV++G K F
Sbjct: 740 NEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYF 799
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
+ M V G+ P EH C+VDLLGRSG L +A + + DA LL AC VH N
Sbjct: 800 QSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKN 859
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
++GE AA HLLEL P+ + LL+N+YA GKW + + M+ + KK PG SWI
Sbjct: 860 IDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWI 918
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 204/450 (45%), Gaps = 66/450 (14%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
F+ ++++H+ +T+T ++ + LI L G L+ A++VFD + K + W
Sbjct: 186 FHCVEKIHA---RTITHGYENSLFVCNPLIDLYFKNG-FLNSAKKVFDGLQK-RDSVSWV 240
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL------------- 119
+++ +++LL+ +MH GV + + FSSVL+AC +V
Sbjct: 241 AMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQ 300
Query: 120 ---LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
LE +C Y+++G A+++F++M +R+ +S++++++G + G A E +
Sbjct: 301 GFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELF 360
Query: 172 DRM----TEKNSVTWVAMIAG-----------------------------------YGKC 192
+M + + VT ++++ Y KC
Sbjct: 361 KKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKC 420
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
+++ A + F + W M V Y + +++ M+ E + ++ +
Sbjct: 421 SDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSIL 480
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
C+ L V++ + V + YVS+ LI M++K G LD A + F R+K KDV+
Sbjct: 481 RTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVV 540
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S+++MI +A H K EAL++F +M+++GI + + F ++AC+ + G +Q
Sbjct: 541 SWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQG-QQIHAQ 599
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
V G +V L R G++ A+
Sbjct: 600 ACVSGYSDDLSVGNALVSLYARCGKVRDAY 629
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 140/306 (45%), Gaps = 65/306 (21%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+Q+H+ +LKT Q++ Y ++ + L +A ++F ++ K K WT++I
Sbjct: 493 EQIHTQVLKTGF----QFNVYVSSVLIDMYAKLGKLDHALKIFRRL-KEKDVVSWTAMIA 547
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------------- 121
+ H F +++ L+ +M G+ + F+S ++ACA + +L +
Sbjct: 548 GYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSD 607
Query: 122 ------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
A++ Y + G + DA FD + ++ ISW+++++G+A G+ + A + +M+
Sbjct: 608 DLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMS 667
Query: 176 ----EKNSVTW-----------------------------------VAMIAGYGKCGEVR 196
E NS T+ +I Y KCG +
Sbjct: 668 KAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNID 727
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
+A++ F E+ E + W AM Y Q+G+ A+ +++ M+Q V + V VG +SAC+
Sbjct: 728 DAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACS 787
Query: 257 QLGDVE 262
+G V+
Sbjct: 788 HVGLVD 793
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 185/438 (42%), Gaps = 64/438 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A VFD++P + W ++ V + + L+ +M + V T++ VL
Sbjct: 118 DLDGAVTVFDEMP-VRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVL 176
Query: 111 NACA--RVP------------------SLL--EAVICGYTKIGLMDDAQRLFDSMAERNV 148
C VP SL +I Y K G ++ A+++FD + +R+
Sbjct: 177 RGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDS 236
Query: 149 ISWSAMVAGYANCGNMKAAK----------------------------EFYDRMTEKNSV 180
+SW AM++G + G + A EFY + + +
Sbjct: 237 VSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGL 296
Query: 181 ---------TWV--AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
T+V A++ Y + G A++VF+ + + D + ++ Q GY+ A
Sbjct: 297 VLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKA 356
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+E++K M + ++ V + +SAC+ +G + + + + + AL+ +
Sbjct: 357 LELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDL 416
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+ KC + A F + ++V+ ++ M+ A+ E+ +F +M+ EGIEPNQ T+
Sbjct: 417 YVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTY 476
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+L CS V+ G +Q G + + ++D+ + G+L+ A + K
Sbjct: 477 PSILRTCSSLRAVDLG-EQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK 535
Query: 410 DFCDAGTWGALLGACKVH 427
+ D +W A++ H
Sbjct: 536 E-KDVVSWTAMIAGYAQH 552
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G++ A VFDE+ SCW + +V A + +++ M QE V+ E G +
Sbjct: 117 GDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVL 176
Query: 253 SACTQLGDVE---MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
C GDV + I A+ + G + + +V N LI ++ K G+L+ A + F ++ +
Sbjct: 177 RGCGG-GDVPFHCVEKIHARTITHGY-ENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR 234
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
D +S+ +M++ + G +EA+ +F +M G+ P F VL+AC+
Sbjct: 235 DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACT 282
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQ+H+ ++KT HD + LI L G N+ A + F ++P+ K + W +++
Sbjct: 695 KQIHAMIIKT---GHDSETEVSNVLITLYAKCG-NIDDAERQFFEMPE-KNEISWNAMLT 749
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ H H +++ L+ M +LGVL + TF VL+AC+ V GL+D+
Sbjct: 750 GYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHV--------------GLVDEG 795
Query: 137 QRLFDSMAERNVI-----SWSAMVAGYANCGNMKAAKEFYDRM 174
+ F SM E + + ++ +V G + A+ F + M
Sbjct: 796 IKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEM 838
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 226/421 (53%), Gaps = 13/421 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR VF+++ K W SLI + H ++ + L+ M V T V++
Sbjct: 991 LACARSVFNEM-LVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVIS 1049
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFD-SMAERNVISWSAMVAGYANCGNMKAAKEF 170
AC + + D R + + E +V + ++ Y G +++A++
Sbjct: 1050 ACTHL-----------GDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKV 1098
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+ +M +KN+VT AMI Y K G + AKK+FD+I D W++M Y Q + ++
Sbjct: 1099 FSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSL 1158
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
E+++ M++ V+ V + +SAC LG +++ + +V + N+LI M
Sbjct: 1159 ELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMF 1218
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG + A + F+ ++ KD +S++S+I A++G EALD+F M EG PN+VTF+
Sbjct: 1219 AKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFL 1278
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
GVL AC++ LVE+G FE M V ++P +H C+VD+L R+GQLEKA S I +
Sbjct: 1279 GVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFISEMPL 1338
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D W LLGAC+ H N + E+A + L EL P + +S LL+NIYAS +W D+ V
Sbjct: 1339 APDPVVWRILLGACRTHGNVAVAEMATKKLSELDPGNSADSMLLSNIYASADRWSDAMNV 1398
Query: 471 K 471
+
Sbjct: 1399 R 1399
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 218/428 (50%), Gaps = 27/428 (6%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +VFDQ P W + ++ + H F L K R + F F+ VL ACA
Sbjct: 437 ALKVFDQSPAP-----WRAFLKAYS-HGPFPLEALHLFKHARQHLADDTFVFTFVLKACA 490
Query: 115 -----RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
R + L A++ Q+ F+ A + +A++ Y + A++
Sbjct: 491 GLGWHRAGAQLHALV-----------VQKGFEFHAYVH----TALINVYVMSRCLVEARK 535
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D M KN V+W MI G+ GEV A+ +FD++ + W + Y + A
Sbjct: 536 VFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEA 595
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ + + M + SE+ ++ I A + LG + M +L + ++ V N+LI +
Sbjct: 596 LTLLRHMMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDL 655
Query: 290 HSKCGYLDLAWREFSR-IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
++K G + + + F + ++++S++S+I+ FA HG S EAL++F +MR GI+PN++T
Sbjct: 656 YAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRIT 715
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+ V+ ACSHGGLVE G F+ M + I P +H C++D+LGR+G+L +A +I
Sbjct: 716 FLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGL 775
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+ W LLG C + +GE A + + +L E G+ A+L+N+ +G++ D+E
Sbjct: 776 PMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAE 835
Query: 469 IVKMMISE 476
+ ++ +
Sbjct: 836 QARKLLDQ 843
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 200/439 (45%), Gaps = 82/439 (18%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
+K++H++L+ ++ H+ Y +IRL L +L A +VF QI + T FLW +L+
Sbjct: 857 VKKLHAHLV--VSGLHN-CQYAMSKVIRLYALHQSDLVSAHKVFKQI-ESPTTFLWNTLL 912
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV--PSLLEAVICGYTKIGLM 133
R + +I+ Y K G+ TF VL ACA+ P E + K+G +
Sbjct: 913 RGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFL 972
Query: 134 DDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCG 193
D +F S ++++ YA CG + A+ ++ M K+ V+W ++I GY
Sbjct: 973 LD---IFVS---------NSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYS--- 1017
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
Q+ K + ++K+M+ E V+ +V MV IS
Sbjct: 1018 ----------------------------QHNRLKEVLTLFKLMQAEEVQADKVTMVKVIS 1049
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK------ 307
ACT LGD MA + ++++ + Y+ N LI + + G L A + FS++K
Sbjct: 1050 ACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVT 1109
Query: 308 -------------------------NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI 342
NKD+IS+SSMI A++ ++L++F +M+ +
Sbjct: 1110 LNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKV 1169
Query: 343 EPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
+P+ V VL+AC+H G ++ G K R IK T ++D+ + G +++A
Sbjct: 1170 KPDAVVIASVLSACAHLGALDLG-KWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEAL 1228
Query: 403 SLIMDYKDFCDAGTWGALL 421
+ D ++ D +W +++
Sbjct: 1229 QVFTDMEE-KDTLSWNSII 1246
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/441 (18%), Positives = 171/441 (38%), Gaps = 116/441 (26%)
Query: 33 QYHYYAQFLIRLLQLPGDNLSYARQVFDQIP----------------------------- 63
++H Y + + + L AR+VFD++P
Sbjct: 511 EFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQ 570
Query: 64 -KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL-- 120
C+ WT LI + + +++ L M G+ S T +V+ A + + +L
Sbjct: 571 MPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISNLGGILMG 630
Query: 121 -------------------EAVICGYTKIGLMDDAQRLFDSMAE-RNVISWSAMVAGYAN 160
++I Y KIG + ++ ++FD M + RN++SW+++++G+A
Sbjct: 631 EMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAM 690
Query: 161 CGNMKAAKEFYDRM----TEKNSVTWVAMIAG---------------------------- 188
G A E + M + N +T++++I
Sbjct: 691 HGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIK 750
Query: 189 --------YGKCGEVREAKKVFDEIS-EPDASCWAAMTVC---YVQNGYAKAAIEMYKVM 236
G+ G + EA+++ + + E + + W + C Y + + AI+M +
Sbjct: 751 HFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDL 810
Query: 237 RQEN-----VRISEVAMVGAISACTQ------------LGDVEMAAI--LAKHVDEGCCD 277
+E+ V + + +G S Q L + M A+ L H+
Sbjct: 811 ERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQEAVMEAVKKLHAHLVVSGLH 870
Query: 278 RTNYVSNALIHMHS-KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
Y + +I +++ L A + F +I++ +++++ A ++A+ + K
Sbjct: 871 NCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKK 930
Query: 337 MRNEGIEPNQVTFIGVLTACS 357
+ +G++P+ +TF VL AC+
Sbjct: 931 AQEKGMKPDNLTFPFVLKACA 951
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 234/428 (54%), Gaps = 16/428 (3%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS---LLEA 122
+T WTS I + ++ ++ M GV + TF ++L+ C PS L
Sbjct: 25 ETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGSETLSN 84
Query: 123 VICGYT-KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++ GY K+GL +V+ +A++ Y+ G++K A+ +D M + NSVT
Sbjct: 85 LLHGYACKLGL-----------DRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVT 133
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W MI GY + G+V A K+FD++ E D W AM +V+ G+ + A+ ++ M+ V
Sbjct: 134 WNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGV 193
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
R VA++ A++ACT LG + + ++V VSN+LI ++ +CG ++ A
Sbjct: 194 RPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFARE 253
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F +++ + V+S++S+I FA +G + E+L F KM+ EG +P+ VTF G LTACSH GL
Sbjct: 254 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGL 313
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
VE+G + F+ M R +GI P EH C+VDL R+G+LE A +I + G+LL
Sbjct: 314 VEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLL 373
Query: 422 GACKVH-VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
AC+ H N L E +HL +L + N +L+N+YA+ GKW+ + ++ + K
Sbjct: 374 AACRTHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLK 433
Query: 481 KSPGCSWI 488
K PG S I
Sbjct: 434 KQPGFSSI 441
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 154/517 (29%), Positives = 263/517 (50%), Gaps = 50/517 (9%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
++VH L+K D Y FLI + G + A +VFD++P + W S++
Sbjct: 144 QKVHGKLIKI---GFDLDVYVCNFLIDMYLKIG-FIELAEKVFDEMP-VRDLVSWNSMVS 198
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--------------RVPSLLE- 121
+ + S++ + +M RLG F S L AC+ + S LE
Sbjct: 199 GYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELEL 258
Query: 122 ------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY----------------- 158
++I Y K G +D A+R+F+ + +N+++W+AM+ G
Sbjct: 259 DIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDVITMINLL 318
Query: 159 ---ANCGNMKAAKEFYDRMTEKNSVTWV----AMIAGYGKCGEVREAKKVFDEISEPDAS 211
+ G + K + K + ++ A++ YGKCGE++ A+ VF++++E +
Sbjct: 319 PSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMV 378
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
W M YVQN K A++M++ + E ++ + + + A +L + ++
Sbjct: 379 SWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYI 438
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+ ++SNA+++M++KCG L A F + KDV+S+++MI A+A HG + ++
Sbjct: 439 MKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSI 498
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
F +MR +G +PN TF+ +LTACS GL+++G F M +GI P EH CM+DL
Sbjct: 499 QFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDL 558
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
LGR+G L++A I + A WG+LL A + H + L E+AARH+L L + TG
Sbjct: 559 LGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCY 618
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LL+N+YA G+W+D + +K ++ E K+ GCS +
Sbjct: 619 VLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMV 655
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 194/439 (44%), Gaps = 90/439 (20%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +F+++ T F+W +IR + + F+++I Y +M G+ + FTF V+ AC
Sbjct: 77 ALDMFEKMNHSDT-FIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACG 135
Query: 115 RVPSL----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L L+ +C Y KIG ++ A+++FD M R+++SW++
Sbjct: 136 ELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNS 195
Query: 154 MVAGYANCGN-----------------------------------MKAAKEFYDRMT--- 175
MV+GY G+ +++ E + ++
Sbjct: 196 MVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSE 255
Query: 176 -EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E + + ++I YGKCG+V A++VF+ I + W AM
Sbjct: 256 LELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMI----------------G 299
Query: 235 VMRQENVRISEV-AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY-----VSNALIH 288
M++++ I +V M+ + +C+Q G A+L G R + + AL+
Sbjct: 300 GMQEDDKVIPDVITMINLLPSCSQSG-----ALLEGKSIHGFAIRKMFLPYLVLETALVD 354
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG L LA F+++ K+++S+++M+ A+ + + +EAL MF + NE ++P+ +T
Sbjct: 355 MYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAIT 414
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
VL A + +G KQ G+ T +V + + G L+ A D
Sbjct: 415 IASVLPAVAELASRSEG-KQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREF-FDG 472
Query: 409 KDFCDAGTWGALLGACKVH 427
D +W ++ A +H
Sbjct: 473 MVCKDVVSWNTMIMAYAIH 491
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 150/341 (43%), Gaps = 60/341 (17%)
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNS 179
+CG+ + GLM +A +F+ M + W+ ++ GY N G + A +FY RM ++
Sbjct: 65 LCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDN 124
Query: 180 VTW----------VAMIAG-------------------------YGKCGEVREAKKVFDE 204
T+ +A++ G Y K G + A+KVFDE
Sbjct: 125 FTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDE 184
Query: 205 ISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
+ D W +M Y +G +++ +K M + + M+ A+ AC+ +
Sbjct: 185 MPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSG 244
Query: 265 AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADH 324
+ V + V +LI M+ KCG +D A R F+RI +K+++++++MI
Sbjct: 245 MEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMI------ 298
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
G QE ++ + P+ +T I +L +CS G + +G R + P
Sbjct: 299 GGMQE---------DDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFL-PYLVL 348
Query: 385 LTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGA 423
T +VD+ G+ G+L+ A + M+ K+ +W ++ A
Sbjct: 349 ETALVDMYGKCGELKLAEHVFNQMNEKNMV---SWNTMVAA 386
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
+K + + N + + G+ + G + A +F++++ D W + Y NG
Sbjct: 46 SKTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLF 105
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ AI+ Y M E +R I AC +L + + + + + D YV N L
Sbjct: 106 QEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFL 165
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M+ K G+++LA + F + +D++S++SM++ + G +L F +M G + ++
Sbjct: 166 IDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADR 225
Query: 347 VTFIGVLTACSHGGLVEDGCK-QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
I L ACS + G + +++ + + + T ++D+ G+ G+++ A +
Sbjct: 226 FGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQ--TSLIDMYGKCGKVDYAERVF 283
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A F ++ + D ++ +I + ++G QEA+D + +M EGI + TF V+
Sbjct: 72 GLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVI 131
Query: 354 TACS-----------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAH 402
AC HG L++ G F+L V ++D+ + G +E A
Sbjct: 132 KACGELLALMVGQKVHGKLIKIG---FDLDVYVCNF---------LIDMYLKIGFIELAE 179
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
+ D D +W +++ ++ + + + +L LG
Sbjct: 180 K-VFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLG 220
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 244/457 (53%), Gaps = 25/457 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLG-VLTSGFTFSSVLNAC 113
AR +FD++P+ + WT++I + F L+ +M + G V + T + + AC
Sbjct: 227 ARSLFDRMPE-RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRAC 285
Query: 114 ----------------ARVP-----SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
+R+P L ++I Y+K+G M +A+ +F M ++ +SW+
Sbjct: 286 RDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWN 345
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASC 212
+++ G + A E +++M K+ V+W MI G+ GE+ + ++F + E D
Sbjct: 346 SLITGLVQREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDIT 405
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD-VEMAAILAKHV 271
W AM +V NGY + A+ + M ++ V + +SA L D +E I + V
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 272 DEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEAL 331
+ + V N+L+ M+ KCG + A++ FS I +++SY++MI+ F+ +G +EA+
Sbjct: 466 KMNMANDLS-VQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAV 524
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDL 391
+F + + G EPN VTF+ +L+AC H G V+ G K F+ M +GI+P +H CMVDL
Sbjct: 525 KLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDL 584
Query: 392 LGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
GRSG L++A++LI +G WG+LL A K H+ +L E+AA+ L+EL P+
Sbjct: 585 FGRSGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPY 644
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+L+ +Y+ +GK D + + + KK PG SWI
Sbjct: 645 VVLSQLYSMVGKNSDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 159/354 (44%), Gaps = 62/354 (17%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A ++F IP+ K + ++I V F ++ LYA+ + F
Sbjct: 128 DLGKAYELFCDIPE-KNAVSYATMITGFVRAGRFDEAECLYAE--------TPVKF---- 174
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
R P ++ GY ++G ++A R+F+ MA + V+S+S+MV GY G + A+
Sbjct: 175 ----RDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSL 230
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+DRM E+N +TW AMI GY K G + ++G+
Sbjct: 231 FDRMPERNVITWTAMIDGYFKAG--------------------------FFEDGFG---- 260
Query: 231 EMYKVMRQE-NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++ MRQE +VR++ + AC + + + + ++ N+LI M
Sbjct: 261 -LFLRMRQEGDVRVNSNTLAVMFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISM 319
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+SK GY+ A F +K KD +S++S+IT + EA ++F KM + + V++
Sbjct: 320 YSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPGK----DMVSW 375
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSGQLEKA 401
++ S G + K EL FG+ P + + T M+ +G E+A
Sbjct: 376 TDMIKGFSGKGEIS---KCVEL----FGMMPEKDDITWTAMISAFVSNGYYEEA 422
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 34/305 (11%)
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY- 189
G + +A+ +F M+ R+++SW+AM++ YA G M A + +D M + + ++ AMI
Sbjct: 64 GNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATTSYNAMITAMI 123
Query: 190 -GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG--------YAKAAIEMYKVMRQEN 240
KC ++ +A ++F +I E +A +A M +V+ G YA+ ++ ++ N
Sbjct: 124 KNKC-DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECLYAETPVK-FRDPVASN 181
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V +S VG + A V EG + ++++ + K G + A
Sbjct: 182 VLLSGYLRVGKWNE-------------AVRVFEGMAVKEVVSYSSMVDGYCKMGRILDAR 228
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHG 359
F R+ ++VI++++MI + G ++ +FL+MR EG + N T + AC
Sbjct: 229 SLFDRMPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDF 288
Query: 360 GLVEDGCKQFELMTRV---FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
+G + L++R+ F + L L M LG G+ KA +M YK D+ +
Sbjct: 289 FRYREGSQIHGLLSRMPLEFDLF-LGNSLISMYSKLGYMGE-AKAVFGVMKYK---DSVS 343
Query: 417 WGALL 421
W +L+
Sbjct: 344 WNSLI 348
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 114/238 (47%), Gaps = 11/238 (4%)
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
++ ++ A GN++ A+ + +M+ ++ V+W AMI+ Y + G++ +A +VFDE+ +
Sbjct: 54 NSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATT 113
Query: 212 CWAAMTVCYVQNG-YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
+ AM ++N A E++ + ++N V+ I+ + G + A L +
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNA----VSYATMITGFVRAGRFDEAECL--Y 167
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ R SN L+ + + G + A R F + K+V+SYSSM+ + G+ +A
Sbjct: 168 AETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDA 227
Query: 331 LDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCM 388
+F +M E N +T+ ++ G EDG F M + ++ + L M
Sbjct: 228 RSLFDRMP----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVM 281
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 262/532 (49%), Gaps = 68/532 (12%)
Query: 18 QVHSYLLKTLTKPHDQY--HYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
Q+H+ +LK+ + D Y + +R ++P A +F + K W S++
Sbjct: 181 QIHAAILKS-GRVLDVYVANALVAMYVRFGKMP-----EAAVIFGNLEG-KDIVTWNSML 233
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA------------- 122
+ + + +++ + + + + S++ A R+ LL
Sbjct: 234 TGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFD 293
Query: 123 --VICG------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA--------------- 159
++ G Y K M R FD MA +++ISW+ AGYA
Sbjct: 294 SNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQL 353
Query: 160 ----------------------NC-GNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVR 196
NC G +K + R + V +I YG+CG +
Sbjct: 354 QMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIID 413
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
A ++F+ I D W +M CYV NG A A+E++ M++ + V +V +SA
Sbjct: 414 YAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVC 473
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L ++ + + +SN L+ M+++CG ++ A++ F+ KN+++I +++
Sbjct: 474 SLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTA 533
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI+A+ HG + A+++F++M++E I P+ +TF+ +L ACSH GLV +G E+M +
Sbjct: 534 MISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEY 593
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
++P EH TC+VDLLGR LE+A+ ++ ++ W ALLGAC++H N E+GE+A
Sbjct: 594 QLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVA 653
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
A LLEL + GN L++N++A+ G+WKD E V+M + + K+PGCSWI
Sbjct: 654 AEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWI 705
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 218/474 (45%), Gaps = 72/474 (15%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
++++ AR++FD++ W S+I + + +++ L+++M + GV+T+ +TF++
Sbjct: 107 NDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAA 166
Query: 110 LNAC-------------------ARVPSLL--EAVICGYTKIGLMDDAQRLFDSMAERNV 148
L AC RV + A++ Y + G M +A +F ++ +++
Sbjct: 167 LQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDI 226
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKV--- 201
++W++M+ G+ G A EF+ + + + V+ +++I G+ G + K++
Sbjct: 227 VTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAY 286
Query: 202 --------------------------------FDEISEPDASCWAAMTVCYVQNGYAKAA 229
FD ++ D W Y QN A
Sbjct: 287 AIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQA 346
Query: 230 IEMYKVMRQENVRISEVAMVGAI-SACTQLGDV-EMAAILAKHVDEGCCDRTNYVSNALI 287
+E+ + ++ E + + + M+G+I AC L + ++ I + G D + N +I
Sbjct: 347 LELLRQLQMEGMDV-DATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV--LQNTII 403
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
++ +CG +D A R F I+ KDV+S++SMI+ + +G + +AL++F M+ G+EP+ V
Sbjct: 404 DVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYV 463
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
T + +L+A ++ G + + R I + T +VD+ R G +E A+ +
Sbjct: 464 TLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNT-LVDMYARCGSVEDAYKIFTC 522
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKT--GNSALLANIYA 459
K+ + W A++ A +H GE A + + EK + LA +YA
Sbjct: 523 TKNR-NLILWTAMISAYGMH---GYGEAAVELFMRMKDEKIIPDHITFLALLYA 572
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 40/279 (14%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK--------- 177
Y K G + DA+ +FD M+ER++ +W+AM+ GY + G A E Y M
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 178 ----------------------------NSVTWV--AMIAGYGKCGEVREAKKVFDEI-S 206
+S +V +++A Y KC ++ A+K+FD +
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
D W ++ Y NG A+ ++ M + V + A+ AC +++
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ + + YV+NAL+ M+ + G + A F ++ KD+++++SM+T F +G
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGL 241
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
EAL+ F ++N ++P+QV+ I ++ A G + +G
Sbjct: 242 YSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNG 280
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 159/363 (43%), Gaps = 62/363 (17%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +FD++ + ++ F W +++ +V + ++ +Y +M LGV +TF +L AC
Sbjct: 11 AEMIFDKMSE-RSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACG 69
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERN-VISWS 152
V L + +++ Y K ++ A++LFD M RN V+SW+
Sbjct: 70 IVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWN 129
Query: 153 AMVAGYANCGNMKAAKEFYDRMTEKNSVTWV----------------------------- 183
++++ Y+ G A + M + VT
Sbjct: 130 SIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKS 189
Query: 184 ----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A++A Y + G++ EA +F + D W +M ++QNG A+E +
Sbjct: 190 GRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFF 249
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
++ +++ +V+++ I A +LG + + + + D V N LI M++KC
Sbjct: 250 YDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKC 309
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
+ R F + +KD+IS+++ +A + +AL++ +++ EG++ + +L
Sbjct: 310 CCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSIL 369
Query: 354 TAC 356
AC
Sbjct: 370 LAC 372
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG + A F ++ + + ++++M+ + +G++ AL+M+ +MR+ G+ + T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 349 FIGVLTACSHGGLVED---GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
F +L AC G+VED G + L + +G + +V L + + A L
Sbjct: 61 FPVLLKAC---GIVEDLFCGAEIHGLAIK-YGCDSFVFVVNSLVALYAKCNDINGARKLF 116
Query: 406 MDYKDFCDAGTWGALLGA 423
D +W +++ A
Sbjct: 117 DRMYVRNDVVSWNSIISA 134
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 154/495 (31%), Positives = 239/495 (48%), Gaps = 61/495 (12%)
Query: 54 YARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC 113
YAR+VFD +P+ + LW ++I V + F SI L+ +M GV T ++VL A
Sbjct: 161 YARKVFDGMPE-RDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAA 219
Query: 114 ARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWS 152
A + L L +I Y+K G ++ A+ LF + ++I+++
Sbjct: 220 AELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYN 279
Query: 153 AMVAGY-ANCGNMKAAKEFYD------RMTEK---------------------------- 177
AM++G+ AN G + K F + R++
Sbjct: 280 AMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKS 339
Query: 178 ----NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
N A A Y K E+ A+ +FDE E W AM Y QNG + AI ++
Sbjct: 340 GIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLF 399
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
K M + + V + +SAC QLG + + + + YVS AL+ M++KC
Sbjct: 400 KEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKC 459
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + AW+ F + K+ +++++MI + HG EAL ++ +M + G P+ VTF+ VL
Sbjct: 460 GNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVL 519
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
ACSH GLV +G + F M + I+PL EH CMVD+LGRSGQLEKA I
Sbjct: 520 YACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPG 579
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WG LLGAC +H + ++ +A+ L EL P G LL+NIY+ + + ++ +
Sbjct: 580 PAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQV 639
Query: 474 ISETEKKKSPGCSWI 488
+ + + KSPGC+ I
Sbjct: 640 VKKRKLAKSPGCTLI 654
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 216/521 (41%), Gaps = 108/521 (20%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGD--NLSYARQVFDQIP 63
L+ ++ TF L Q H+ + + Y + L +L Q D +AR +F +P
Sbjct: 18 LINKASTFPHLAQTHAQFIL------NGYRFDLATLTKLTQKLFDFSATRHARALFFSVP 71
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTS-GFTFSSVLNACARVPSLLEA 122
K FL+ L+R L+ SI LY + R L+ FT++ + AC+ L+
Sbjct: 72 KPDI-FLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM-- 128
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
++ +++ GY + N
Sbjct: 129 -------------------------LLHAHSIIDGYGS-----------------NVFVG 146
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A++ Y K V A+KVFD + E D W M V+N +I++++ M + VR
Sbjct: 147 SALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206
Query: 243 ISEVAMVGAISACTQLGDVEMA---AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+ + + A +L ++++ LA + G CD YV LI ++SKCG ++ A
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCD---YVLTGLISLYSKCGDVNTA 263
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT----- 354
F RI D+I+Y++MI+ F +G ++ ++ +F ++ G + T +G++
Sbjct: 264 RLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPF 323
Query: 355 -----ACS-HGGLVEDGC-----------------KQFELMTRVFGIKPLTEHL--TCMV 389
ACS HG V+ G + +L +F P + M+
Sbjct: 324 GHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMI 383
Query: 390 DLLGRSGQLEKAHSL---IMDYKDFCDAGTWGALLGACKVHVNAELGEIA----ARHLLE 442
++G E A SL +M + +A T +L AC A+LG ++ HL++
Sbjct: 384 SGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSAC-----AQLGSLSFGKWVHHLIK 438
Query: 443 ---LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L P ++AL+ ++YA G SE ++ S +EK
Sbjct: 439 SENLEPNIYVSTALV-DMYAKCGNI--SEAWQLFDSMSEKN 476
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 25/189 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+S A Q+FD + + K W ++I + LH + +++ LY +M LG S TF SVL
Sbjct: 461 NISEAWQLFDSMSE-KNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVL 519
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMK 165
AC+ GL+ + + +F +M + I ++ MV G ++
Sbjct: 520 YACSHA--------------GLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLE 565
Query: 166 AAKEFYDRM-TEKNSVTWVAMIAG---YGKCGEVREAKKVFDEISEPDASCWAAMTVCY- 220
A EF +M E W ++ + R A + E+ + ++ Y
Sbjct: 566 KALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYS 625
Query: 221 VQNGYAKAA 229
V+ + KAA
Sbjct: 626 VERNFPKAA 634
>gi|357501421|ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365545|gb|ABN09779.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496014|gb|AES77217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 601
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 163/544 (29%), Positives = 266/544 (48%), Gaps = 67/544 (12%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL----PGDN-----LSYARQVF 59
++KTF L ++H+++L+ H+ H +F+ L P N + +AR F
Sbjct: 20 KTKTFKTLLEIHAFILRN--SLHNNLHLLTKFISSSTSLALSTPRRNDAVSIVQHARLFF 77
Query: 60 DQIPKCK-TQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVL-TSGFTFSSVLNACA--- 114
+ P K +FL ++I H F LY + + S +TF+ +L C+
Sbjct: 78 NHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTFTLILKGCSVSD 137
Query: 115 -----------------------------------------------RVPSLLE--AVIC 125
V SL+ AVI
Sbjct: 138 AKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIV 197
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
GY + G M +A++LFD M +R+V +++ M+ GY G M A++ +D+M KN ++W +M
Sbjct: 198 GYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSM 257
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRIS 244
+ GY + G+V EA+ +FD + E + W AM Y QNG + A++++ MR +V ++
Sbjct: 258 VHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMN 317
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
EV +V + A L +++ + V D + +V NAL+ M++KCG + A F
Sbjct: 318 EVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFE 377
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+ KD S++++I + +G ++EAL++F M EG EPNQ+T VL+AC+H GLVE+
Sbjct: 378 EMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEE 437
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G + FE M R FGI P EH CM+DLLGR+G+L++A LI + + L AC
Sbjct: 438 GRRCFEAMER-FGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFLFAC 496
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
+ E + +++ E G+ +L N+YA+ +W D E VK M+ + K
Sbjct: 497 CYFEDVSRAERILKVAVKMEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNKEVA 556
Query: 485 CSWI 488
S I
Sbjct: 557 WSVI 560
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 135/408 (33%), Positives = 223/408 (54%), Gaps = 41/408 (10%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN--- 178
A+I GY G ++ AQ++FD + ++V+SW+A+++GYA+ GN K A + + M + N
Sbjct: 174 ALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKP 233
Query: 179 ----------------SV-------TWV-------------AMIAGYGKCGEVREAKKVF 202
S+ +W+ A+I Y KCGEV A +F
Sbjct: 234 DESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLF 293
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+S D W M Y K A+ +++ M + ++V M+ + AC QLG ++
Sbjct: 294 QGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAID 353
Query: 263 MAAILAKHVDEGCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
+ ++D+ TN S +LI M++KCG ++ A + F+ + ++ + + ++MI
Sbjct: 354 FGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFG 413
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
FA HG++ A D+F +MR GIEP+ +TF+G+L+ACSH G+++ G + F MT+ + I P
Sbjct: 414 FAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITP 473
Query: 381 LTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHL 440
EH CM+DLLG G ++A +I D W +LL ACK+H N ELGE A+ L
Sbjct: 474 KLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKL 533
Query: 441 LELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+++ PE G+ LL+NIYA+ G+W + ++ ++++ KK PGCS I
Sbjct: 534 IKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSI 581
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 212/421 (50%), Gaps = 23/421 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG-DNLSYARQVFDQIPK 64
L+ KT L+ +H+ ++KT H+ + ++ L + P D L YA VF+ I +
Sbjct: 8 LLHNCKTLQSLRIIHAQMIKT--GLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQE 65
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV- 123
+W ++ R H L + +I LY M LG+L + +TF +L +CA++ E
Sbjct: 66 -PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQ 124
Query: 124 ICGYT-KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
I G+ K+G E ++ +++++ Y G K A + +D + ++ V++
Sbjct: 125 IHGHVLKLGY------------ELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSY 172
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A+I GY G + A+K+FDEI D W A+ Y G K A++++K M + NV+
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
E MV +SAC Q G +++ + +D+ + NALI ++SKCG ++ A
Sbjct: 233 PDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGL 292
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F + NKDVIS+++MI + +EAL +F +M G PN VT + +L AC+ G +
Sbjct: 293 FQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAI 352
Query: 363 EDG-CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDF--CDAGTW 417
+ G + R+ G+ + T ++D+ + G +E AH + M ++ C+A +
Sbjct: 353 DFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIF 412
Query: 418 G 418
G
Sbjct: 413 G 413
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 50/268 (18%)
Query: 49 GDNLSYARQVFDQIPKC---------------KTQFLWTSLIRNHVLHAHFRQSILLYAK 93
G NL + D KC K W ++I + +++++LL+ +
Sbjct: 267 GSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQE 326
Query: 94 MHRLGVLTSGFTFSSVLNACARV-----------------------PSLLEAVICGYTKI 130
M R G + T S+L ACA++ SL ++I Y K
Sbjct: 327 MLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKC 386
Query: 131 GLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMI 186
G ++ A ++F+SM R + + +AM+ G+A G AA + + RM E + +T+V ++
Sbjct: 387 GDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 446
Query: 187 AGYGKCGEVREAKKVFDEISE-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
+ G + +++F +++ P + M G K A EM M E
Sbjct: 447 SACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEP- 505
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAK 269
V + AC G+VE+ A+
Sbjct: 506 --DGVIWCSLLKACKMHGNVELGESFAQ 531
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/540 (28%), Positives = 272/540 (50%), Gaps = 77/540 (14%)
Query: 17 KQVHSYLLKTLTKPHDQYHY------YAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
+ H+ +LKTL P + Y YA+ D+L+ A+ + + P C++
Sbjct: 26 RAAHAQILKTLKTPFPAFLYNHLVNMYAKL---------DHLNSAKLILELAP-CRSVVT 75
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL---------------NACAR 115
WT+LI V + F ++L ++ M V + FTF VL +A A
Sbjct: 76 WTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAV 135
Query: 116 VPSLLEAVICG------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG----NMK 165
L+ V G Y+K+G ++DA ++FD M RN+ +W+A ++ G ++
Sbjct: 136 KEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVI 195
Query: 166 AAKEFYDRMTEKNSVTWVA-----------------------------------MIAGYG 190
A E + +S+T+ A +I YG
Sbjct: 196 AFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYG 255
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
KCGEV ++ VFD + E ++ W+++ YVQN + A ++ R+E++ ++ +
Sbjct: 256 KCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSS 315
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+ AC L ++E + + C ++ +V++AL+ M+ KCG +D A + F+ + ++
Sbjct: 316 VLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERN 375
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
++S+++++ +A G + +A+ + +M + GI P+ V+ I L+ACS G ++ G K F
Sbjct: 376 LVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIF 435
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
E M +G++P EH C+VDLLGR+G +E A+ I WGALLGAC++H
Sbjct: 436 ESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGK 495
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
ELG++AA L EL P+ +GN +L+N++A+ G+W++ +V+ + E KK G SWI+
Sbjct: 496 PELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWIT 555
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 148/335 (44%), Gaps = 60/335 (17%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
+ VFD++ + + W+SLI +V + ++ L+ + + + + F SSVL ACA
Sbjct: 263 SEMVFDRMGE-RNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACA 321
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ + A++ Y K G +D+A++ F++M ERN++SW+A
Sbjct: 322 GLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNA 381
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSV--TWVAMIAGYGKC---GEVREAKKVFDEIS-- 206
++ GYA+ G+ A + MT + ++V++I C G+++ K+F+ +
Sbjct: 382 LLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKER 441
Query: 207 ---EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQLGDVE 262
EP +A + + G + A + K M +++ GA + AC G E
Sbjct: 442 YGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFP----PTISIWGALLGACRMHGKPE 497
Query: 263 MAAILAKHVDE-GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN--KDV-------- 311
+ + A+ + E D N+V L +M + G W E + ++N K+V
Sbjct: 498 LGKLAAEKLFELDPKDSGNHV--VLSNMFAATGR----WEEVTVVRNEMKEVGIKKGAGF 551
Query: 312 --ISYSSMITAF----ADHGKSQEALDMFLKMRNE 340
I+ S I F H K E D+ K+R E
Sbjct: 552 SWITVDSRIHMFQAKDKSHEKDPEIQDILGKLRKE 586
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 224/419 (53%), Gaps = 5/419 (1%)
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTK 129
L +LIR A ++ LYA + R G + T S+L + A P+ + G
Sbjct: 173 LHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPA-----VPGARG 227
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
+ L A + +A ++S + + G + A ++ T+ +I Y
Sbjct: 228 LALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAY 287
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
+ G V +A+ +FDE+ +A W+AM YVQ G + A+ ++ M+ + VR + +V
Sbjct: 288 ARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLV 347
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
G ++AC QLG +E + ++ T ++ AL+ M++KCG + LA F +K K
Sbjct: 348 GVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEK 407
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+V+++++MI A HG+ EAL++F +M G++P+ + FIG L AC+H GLV+ G + F
Sbjct: 408 NVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELF 467
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
+ M R +GIKP EH CMVDLL R+G L +A ++ DA WGAL+ C+ H N
Sbjct: 468 DSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKN 527
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL E +H +EL P+K+G LL NIYA+ G+ + ++ ++ E K+PGCS +
Sbjct: 528 VELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTV 586
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+ A +VF ++ K K WT++I+ +H +++ L+++M RLGV F L
Sbjct: 393 EMQLAMEVF-KVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGAL 451
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMK 165
AC T GL+D + LFDSM + I + MV A G +
Sbjct: 452 CAC--------------THTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLN 497
Query: 166 AAKEFYDRMTEK-NSVTWVAMIAG--YGKCGEVRE-AKKVFDEISEPDAS-CWAAMTVCY 220
A+E ++M K +++ W A++AG + K E+ E K + E+ EPD S + + Y
Sbjct: 498 EAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIEL-EPDKSGAYVLLGNIY 556
Query: 221 VQNGYAKAAIEMYKVMRQENV 241
+G +A E+ +MR++ V
Sbjct: 557 AASGRHASAREIRHLMREKGV 577
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 252/500 (50%), Gaps = 61/500 (12%)
Query: 49 GDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSS 108
G L AR++FD +P+ +W +I +V + + +L+ +M G+ TF+S
Sbjct: 159 GRQLGDARKLFDMMPQIDL-VVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTS 217
Query: 109 VLNACARVPSLLE------------AVICGYTKIGLMD---------DAQRLFDSMAERN 147
L + A SL + ++ Y L+D A ++F+ + +
Sbjct: 218 FLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFD 277
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG--------------- 188
++ ++AM++GY G K A E + + +K N++T+ +++
Sbjct: 278 IVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHG 337
Query: 189 --------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
Y KCG + A +F IS DA CW ++ + Q+G +
Sbjct: 338 YIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEE 397
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
AI +++ M E V+ V + A+SAC + + + + +G + + +ALI+
Sbjct: 398 AIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALIN 457
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M++KCG L++A F+ ++ K+ ++++S+I A+ HG ++L +F M EGI+P+ +T
Sbjct: 458 MYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHIT 517
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+ +L++C H G VEDG + F MT +GI EH CM DL GR+G L++A +I
Sbjct: 518 FLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSM 577
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
A WG LLGAC+VH N EL E+A+R+LL+L P+ +G LL ++ A GKW+
Sbjct: 578 PFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVH 637
Query: 469 IVKMMISETEKKKSPGCSWI 488
++ ++ E +K PGCSWI
Sbjct: 638 KIQHLMKERGVQKVPGCSWI 657
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 137/331 (41%), Gaps = 44/331 (13%)
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
++I Y G + +A++ FD++ + D W M YVQ G + +AI+++K M +
Sbjct: 50 SLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKP 109
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
V +S VE L V D V N L+ ++SK L A + F
Sbjct: 110 DSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLF 169
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS------ 357
+ D++ ++ MI + +G +A +F +M + GI+P+ +TF L + +
Sbjct: 170 DMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLK 229
Query: 358 -----HGGLVEDG------------------------CKQFELMTRVFGIKPLTEHLTCM 388
HG +V G CK F L T+ F I T ++
Sbjct: 230 QIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTK-FDIVIYTAMISGY 288
Query: 389 VDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC----KVHVNAELGEIAARHLLELG 444
V L G + + ++ K +A T+ ++L AC + + EL ++ LE
Sbjct: 289 V-LNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELE-- 345
Query: 445 PEKTGNSALLANIYASMGKWKDSEIVKMMIS 475
EK + + N+YA G+ + ++ IS
Sbjct: 346 -EKCPVGSAIMNMYAKCGRLDLAHLIFGRIS 375
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
I CT L +V + ++ + E D +V+++LI +++ G ++ A R F ++ +KD
Sbjct: 17 IKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDC 76
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+ ++ MI + G+S A+ +F M + +P+ VTF VL+ +VE G + L
Sbjct: 77 VLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGL 136
Query: 372 MTRV-FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+ R PL + V GR QL A L D D W ++G
Sbjct: 137 VVRSGLDFVPLVGNTLVTVYSKGR--QLGDARKL-FDMMPQIDLVVWNRMIGG 186
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 248/467 (53%), Gaps = 36/467 (7%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ AR+VFD+IP+ + + +IR++V + + + + ++ M V +TF VL
Sbjct: 89 DVASARKVFDEIPE-RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 111 NACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC+ +++ ++ Y K G + +A+ + D M+ R+V+
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 150 SWSAMVAGYAN----------CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAK 199
SW+++V GYA C M++ K +D T + + V+ V K
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT----TENVMYVK 263
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+F ++ + W M Y++N A+E+Y M + V++ + AC
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+ + + +++ + NALI M++KCG L+ A F +K++DV+S+++MI+
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK 379
A+ G+ +A+ +F K+++ G+ P+ + F+ L ACSH GL+E+G F+LMT + I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 380 PLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
P EHL CMVDLLGR+G++++A+ I D + WGALLGAC+VH + ++G +AA
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 440 LLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
L +L PE++G LL+NIYA G+W++ ++ ++ KK+PG S
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 134/340 (39%), Gaps = 80/340 (23%)
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN------- 178
Y + + A+++FD + ERNVI + M+ Y N G + + M N
Sbjct: 83 AYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYT 142
Query: 179 ----------------------SVTWV----------AMIAGYGKCGEVREAKKVFDEIS 206
S T V +++ YGKCG + EA+ V DE+S
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 202
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
D W ++ V Y QN A+E+ + M E+V+IS D A
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCREM--ESVKISH--------------DAGTMAS 246
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
L V + YV + F ++ K ++S++ MI + +
Sbjct: 247 LLPAVSNTTTENVMYVKDM-----------------FFKMGKKSLVSWNVMIGVYMKNAM 289
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL- 385
EA++++ +M +G EP+ V+ VL AC + G K + R K L +L
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER----KKLIPNLL 345
Query: 386 --TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
++D+ + G LEKA + + K D +W A++ A
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%)
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
NS V ++ Y +V A+KVFDEI E + M YV NG+ ++++ M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
NVR + AC+ G + + + + T +V N L+ M+ KCG+L
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A + +DV+S++S++ +A + + +AL++ +M + I + T +L A S
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 252
Query: 358 H 358
+
Sbjct: 253 N 253
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/544 (30%), Positives = 259/544 (47%), Gaps = 71/544 (13%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
+ N+ KQ+HS ++ P LI + G + A VF + F
Sbjct: 25 QNLNKGKQLHSLMITYGFSPSPPS---ITSLINMYSKCG-QMGEAILVFYDPCHERNVFA 80
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----------- 119
+ ++I V + + Y KM GV+ +TF V+ C V +
Sbjct: 81 YNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHGCLLKMG 140
Query: 120 LE-------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
LE A++ Y K G M+DAQ++F ++ R+V+ W+AM+ GYA G + A E +
Sbjct: 141 LELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFR 200
Query: 173 RMTEKN------SVTWV---------------------------------AMIAGYGKCG 193
RM K ++T + A+I YGKC
Sbjct: 201 RMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCK 260
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
+ +A +F+ I+E D W ++ + Q G + ++ M + V + +
Sbjct: 261 HIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLP 320
Query: 254 ACTQLG------DVEMAAI---LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
AC+ L ++ I L K + G D VSNA++ M++KCG ++ A + F
Sbjct: 321 ACSHLAALMHGREIHGYMIINGLGKDDENGAVDNL-LVSNAVMDMYAKCGSMNNALKIFD 379
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+ KDV S++ MI + HG + EAL MF +M +PN+VT +GVL+AC+H G V
Sbjct: 380 SMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSH 439
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G M FG+ P EH TC++D+LGR+G LE A+ ++ + W ALLGAC
Sbjct: 440 GRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGAC 499
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
++H NAEL EIAAR +L+L PE G+ L++N+Y +G++++ V+ + E KK+PG
Sbjct: 500 RLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPG 559
Query: 485 CSWI 488
CSWI
Sbjct: 560 CSWI 563
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 130/286 (45%), Gaps = 20/286 (6%)
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKV 201
NV A + A+ N+ K+ + M + + ++I Y KCG++ EA V
Sbjct: 9 NNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILV 68
Query: 202 F-DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
F D E + + A+ +V NG A + YK MR E V + + C ++ +
Sbjct: 69 FYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVME 128
Query: 261 VEMAAILAKHVDEGCCDRTN-----YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
V+ GC + +V +AL++ + K G ++ A + F + +DV+ ++
Sbjct: 129 VKKI--------HGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWN 180
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
+MI +A G EAL++F +M +G+ P++ T G+L+ + G +++G K +
Sbjct: 181 AMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNG-KTVHGIVMK 239
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G ++D+ G+ + A +I + + D +W +++
Sbjct: 240 MGYDSGVSVSNALIDMYGKCKHIGDA-LIIFEMINEKDIFSWNSII 284
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 230/424 (54%), Gaps = 7/424 (1%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
++ L +LIR A ++ LYA + R G + T S+L + A P+ +
Sbjct: 169 RSADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPA-----VP 223
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANC-GNMKAAKEFYDRMTEKNSVTWVA 184
G + L A + +A ++S +A++ +A G + A ++ T+
Sbjct: 224 GARGLALAVHAHAVKLGLAGFLLVS-NALIRVHAGILGRLSDALVLLRTAASVDASTFNT 282
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I Y + G V +A+ +FDE+ +A W+AM YVQ G + A+ ++ M+ + VR
Sbjct: 283 LITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPD 342
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ +VG ++AC QLG +E + ++ T ++ AL+ M++KCG + LA F
Sbjct: 343 DTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFK 402
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
+K K+V+++++MI A HG+ EAL++F +M G++P+ + FIG L AC+H GLV+
Sbjct: 403 VMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDK 462
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G + F+ M R +GIKP EH CMVDLL R+G L +A ++ DA WGAL+ C
Sbjct: 463 GRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGC 522
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
+ H N EL E +H +EL P+K+G LL NIYA+ G+ + ++ ++ E K+PG
Sbjct: 523 RFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPG 582
Query: 485 CSWI 488
CS +
Sbjct: 583 CSTV 586
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+ A +VF ++ K K WT++I+ +H +++ L+++M RLGV F L
Sbjct: 393 EMQLAMEVF-KVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGAL 451
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMK 165
AC T GL+D + LFDSM + I + MV A G +
Sbjct: 452 CAC--------------THTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLN 497
Query: 166 AAKEFYDRMTEK-NSVTWVAMIAG--YGKCGEVRE-AKKVFDEISEPDAS-CWAAMTVCY 220
A+E ++M K +++ W A++AG + K E+ E K + E+ EPD S + + Y
Sbjct: 498 EAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIEL-EPDKSGAYVLLGNIY 556
Query: 221 VQNGYAKAAIEMYKVMRQENV 241
+G +A E+ +MR++ V
Sbjct: 557 AASGRHASAREIRHLMREKGV 577
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 233/423 (55%), Gaps = 16/423 (3%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG-FTFSSVLNACARVPSL-LEAVICGYT 128
W S+I H +++ ++ + + L F+ +S L+ACA + L I GY
Sbjct: 207 WNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYI 266
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR--MTEKNSVTWVAMI 186
+ +FD+ +A+++ YA G ++ A+ ++ +++ + + + A++
Sbjct: 267 -------VRTMFDASGAVG----NALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALL 315
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
GY K G++ A+++F+ + +PD W AM V YVQNG AIE++K M E R +
Sbjct: 316 NGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSF 375
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
+ +SA + + + + + V NAL M++K G ++ A + F+ +
Sbjct: 376 TLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLL 435
Query: 307 K-NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ N+D +S++SMI A A HG +EA+++F +M GI+P+ +T++GVL+AC+HGGLVE G
Sbjct: 436 RQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQG 495
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
F+LM V I P H CMVDL GR+G L++A+ + + D WG+LL +CK
Sbjct: 496 RSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCK 555
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
V+ N +L ++AA LL + P +G + LAN+Y+S GKW D+ ++ ++ KK G
Sbjct: 556 VYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGL 615
Query: 486 SWI 488
SW+
Sbjct: 616 SWV 618
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 162/340 (47%), Gaps = 45/340 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A QVFD IP + WT++I + F +I ++ M + VL + FT ++VL
Sbjct: 57 LEKAHQVFDLIP-VRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLA 115
Query: 112 ACARVPS---------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
+CA S + +++ Y K G + A+ +FD M RN S
Sbjct: 116 SCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSS 175
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI----- 205
W+AM++ + NCG + A ++ ++E++ V+W +MIAG + G EA + F I
Sbjct: 176 WNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTS 235
Query: 206 SEPDA-SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV-----AMVGA--ISACTQ 257
+PD S +A++ C A +E +Q + I VG IS +
Sbjct: 236 LKPDRFSLASALSAC--------ANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAK 287
Query: 258 LGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSM 317
G VE+A + + G D AL++ + K G + A + F+ +K+ DV+++++M
Sbjct: 288 SGGVEIARRIIEQ--SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAM 345
Query: 318 ITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
I + +G + +A+++F M +EG PN T +L+A S
Sbjct: 346 IVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASS 385
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 174/376 (46%), Gaps = 25/376 (6%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
L+ ++ Y K G DA LF+ M + SW+ +++GYA G ++ A + +D + ++
Sbjct: 12 LMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRD 71
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
SV+W +I GY + G +A K+F ++ + + + A + + K +
Sbjct: 72 SVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHS 131
Query: 239 ENVRISEVAMVGAISACTQL----GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
V++ A V ++ + GD++MA ++ + R NA+I +H CG
Sbjct: 132 FVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKL----RNTSSWNAMISLHMNCG 187
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK-MRNEGIEPNQVTFIGVL 353
+DLA +F + +D++S++SMI HG EAL F +++ ++P++ + L
Sbjct: 188 RVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASAL 247
Query: 354 TACSHGGLVEDGCKQFELMTR-VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD--YKD 410
+AC++ + G + + R +F + ++ + +SG +E A +I D
Sbjct: 248 SACANLEKLSFGKQIHGYIVRTMFDASGAVGN--ALISMYAKSGGVEIARRIIEQSGISD 305
Query: 411 FCDAGTWGALLGACKVHVNAELGEIA-ARHLLE--LGPEKTGNSALLANIYASMGKWKDS 467
D + ALL +LG+I AR + P+ +A++ Y G D+
Sbjct: 306 L-DVIAFTALLNGY-----VKLGDITPARQIFNSLKDPDVVAWTAMIVG-YVQNGLNNDA 358
Query: 468 -EIVKMMISETEKKKS 482
E+ K M+SE + S
Sbjct: 359 IEVFKTMVSEGPRPNS 374
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 35/219 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VF+ + + + WTS+I H ++I L+ +M LG+ T+ VL+AC
Sbjct: 428 ARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACT 487
Query: 115 -------------------RVPSLLEAVICG---YTKIGLMDDAQRLFDSMA-ERNVISW 151
++ L C + + GL+ +A + ++M E +VI+W
Sbjct: 488 HGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAW 547
Query: 152 SAMVAG---YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFD----- 203
++++ Y N K A E + NS + A+ Y CG+ +A K+
Sbjct: 548 GSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKAR 607
Query: 204 EISEPDASCWAAMT----VCYVQNGYAKAAIEMYKVMRQ 238
+ + W + V V++G E+YK+M +
Sbjct: 608 GVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDK 646
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 256/497 (51%), Gaps = 40/497 (8%)
Query: 5 YLVPRSKTFNQLKQVHSYLLKTLTKPHDQ------YHYYAQFLIRLLQLPGDNLSYARQV 58
+L+ + KT +L+++H+ L P+ Q + YA+F P D A ++
Sbjct: 25 HLLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSYAEF-----GRPAD----AGRL 75
Query: 59 FDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA---- 114
FD+IP +TSL+ H+ H ++I +++ G GF L+A
Sbjct: 76 FDEIPHPDI-ISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGD 134
Query: 115 -RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
R+ S++ +I F + ++ +A+V Y CG + A+ +DR
Sbjct: 135 QRIGSVVHGLI---------------FRCGLDSELVVCNALVDMYCRCGKFEPARTVFDR 179
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M K+ VTW +M+ GY KC V A F ++ W A+ +VQ+ A+E++
Sbjct: 180 MLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELF 239
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
M E R + + +VG +SAC +G +++ + + + V+NAL+ M++K
Sbjct: 240 GKMLLEGHRPNHITIVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKS 299
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G + A+ F ++ KD ++++MI++F G ++A+++F M GI PN VTF+ VL
Sbjct: 300 GSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVL 359
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF-C 412
+ACSH GL+++G + F+ M V+ I P EH CMVDLLGR G LE+A +LI D+ D
Sbjct: 360 SACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALI-DHMDVEP 418
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS-EIVK 471
D W +LL AC H N L EIA +++ P G LL N+YA +WK++ ++ K
Sbjct: 419 DIVIWRSLLSACLAHGNDRLAEIAGMEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRK 478
Query: 472 MMISETEKKKSPGCSWI 488
M+S KK PGCSWI
Sbjct: 479 QMLSRKIYKK-PGCSWI 494
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 233/442 (52%), Gaps = 13/442 (2%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D+L+ AR+VF+ + + W ++I +V F++++ L KM LG+ T++++
Sbjct: 237 DDLNGAREVFEAMVE-NLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTI 295
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS---AMVAGYANCGNMKA 166
++ACA V S ++G A L + + + S A++ Y +
Sbjct: 296 ISACANVGSF---------QMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A++ + M +N +TW A+++GY G + EAK F+E+ + M QNG+
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
++++K MR + + A GA++AC+ LG +E L + + + V NA+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M++KCG ++ A F + + D++S++SMI A HG +A+++F +M EG+ P++
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDR 526
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+TF+ VLTACSH GLVE G F M +GI P +H MVDL R+G A +I
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
A W ALL C++H N +LG AA L +L P+ G LL+NIYA +G+W +
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNE 646
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
V+ ++ + +K P CSWI
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWI 668
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 209/488 (42%), Gaps = 83/488 (17%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVFDQIPK----- 64
+F+ + VH++++ + KP FL RLL++ NL YARQ+F++IP
Sbjct: 28 SFSLARAVHAHMIASGFKPR------GHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIA 81
Query: 65 ---------------------------CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL 97
+ + ++I + + ++ L+ M R
Sbjct: 82 RTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRD 141
Query: 98 GVLTSGFTFSSVLNACARVPSLLEA---VICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
FTF+SVL+A + + C K G+ + + +++ V S +
Sbjct: 142 DFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+C M +A++ +D M +++ +TW MI GY + ++ A++VF+ + E + W
Sbjct: 202 GI---SCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWN 258
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
AM YV G + A+ + + MR ++ ++ ISAC +G +M + ++ +
Sbjct: 259 AMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKN 318
Query: 275 CCDRTN----YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ + VSNALI ++ K +D A + F + +++I+++++++ + + G+ +EA
Sbjct: 319 ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEA 378
Query: 331 -------------------------------LDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
L +F +MR +G EP F G LTACS
Sbjct: 379 KSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVL 438
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
G +E+G +Q G + M+ + + G +E A S+ + D +W +
Sbjct: 439 GALENG-RQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS-VDLVSWNS 496
Query: 420 LLGACKVH 427
++ A H
Sbjct: 497 MIAALGQH 504
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 27/259 (10%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
+F KQVH+Y+LK P+ + + L + + AR++F +P + W
Sbjct: 304 SFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMP-VRNIITW 362
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
+++ +V ++ + +M +LT L +I G + G
Sbjct: 363 NAILSGYVNAGRMEEAKSFFEEMPVKNLLT------------------LTVMISGLAQNG 404
Query: 132 LMDDAQRLFDSMA----ERNVISWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWV 183
D+ +LF M E +++ + + G ++ ++ + ++ E +
Sbjct: 405 FGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGN 464
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
AMI+ Y KCG V A+ VF + D W +M Q+G+ AIE++ M +E V
Sbjct: 465 AMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFP 524
Query: 244 SEVAMVGAISACTQLGDVE 262
+ + ++AC+ G VE
Sbjct: 525 DRITFLTVLTACSHAGLVE 543
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/492 (32%), Positives = 246/492 (50%), Gaps = 62/492 (12%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL----PGDNLSYARQVFDQ 61
L+ + +L+++H++++ + H++ +LL +L+YA+ +F Q
Sbjct: 10 LLQGCNSLKRLRKIHAHVIVS------GLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQ 63
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV-LTSGFTFSSVLNACARVPSLL 120
+ +C W S+IR + +I+ Y +M + FTFS VL AC R+
Sbjct: 64 M-ECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIK--- 119
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNV--ISWSAMVAGYANCGNMKAAKEFYDRMTEKN 178
AER + S + GY + +
Sbjct: 120 -----------------------AERKCKEVHGSVIRCGY-----------------DAD 139
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
+ ++ Y G V A++VFD++ D W AM C+ Q G + A++ Y MR
Sbjct: 140 VIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRS 199
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL 298
ENV + +VG IS+C LG + + + + E D++ YV NALI M++KCG LD
Sbjct: 200 ENVDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQ 259
Query: 299 AWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH 358
A F R++ KD+ +++SMI + HG+ EA+ F +M I+PN VTF+G+L CSH
Sbjct: 260 AILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSH 319
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GLV++G K F LM+ F +KP +H C+VDL GR+G+L+KA ++ + D+ W
Sbjct: 320 QGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSN-SSHNDSVLWR 378
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM--MISE 476
LLG+CK+H N +GEIA L ELG G+ LLA IYA G+ + + +M MI
Sbjct: 379 ILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYA--GEKDKAGVARMRKMIKS 436
Query: 477 TEKKKSPGCSWI 488
KK +PG SWI
Sbjct: 437 QGKKTTPGWSWI 448
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 211/409 (51%), Gaps = 40/409 (9%)
Query: 119 LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT--- 175
L ++ Y K G +DDA+R+FD M +++++W+A++AG++ + A + +M
Sbjct: 125 LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLG 184
Query: 176 -EKNSVTWV-----------------------------------AMIAGYGKCGEVREAK 199
+ N T A++ Y +CG + A+
Sbjct: 185 LQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ 244
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
FD + W A+ + + G + A+ + M+++N + + SAC +G
Sbjct: 245 LAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIG 304
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+E + H+ + ++ N L+ M++K G +D A R F R+ DV+S+++M+T
Sbjct: 305 ALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLT 364
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK 379
A HG +E LD F +M GIEPN+++F+ VLTACSH GL+++G FELM + + ++
Sbjct: 365 GCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVE 423
Query: 380 PLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
P H VDLLGR G L++A I + A WGALLGAC++H N ELG AA
Sbjct: 424 PDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAER 483
Query: 440 LLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL P +G LL+NIYAS G+W+D V+ M+ E+ KK P CSW+
Sbjct: 484 AFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWV 532
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 136/314 (43%), Gaps = 69/314 (21%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD++P K WT+LI + R ++LL+ +M RLG+ + FT SS+L
Sbjct: 139 LDDARRMFDEMP-TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
A L A++ Y + G MD AQ FD M ++ +S
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKN---------SV-------------TWV----- 183
W+A+++G+A G + A +M KN SV WV
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMI 317
Query: 184 ------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
++ Y K G + +AK+VFD + +PD W M Q+G K ++
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMA----AILAKHVDEGCCDRTNYVSNALI 287
++ M + + +E++ + ++AC+ G ++ ++ K+ E D +YV+ +
Sbjct: 378 RFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEP--DVPHYVT--FV 433
Query: 288 HMHSKCGYLDLAWR 301
+ + G LD A R
Sbjct: 434 DLLGRVGLLDRAER 447
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 252 ISACTQLGDVEMAAILAKH-VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+ CT+LG VE I+ H VD D + N +++M++KCG LD A R F + KD
Sbjct: 94 LKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKD 153
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC-SHGGLVEDGCKQF 369
+++++++I F+ + + ++AL +F +M G++PN T +L A S GL D Q
Sbjct: 154 MVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGL--DPGTQL 211
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
+G + + +VD+ R G ++ A L D +W AL+ H
Sbjct: 212 HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQ-LAFDGMPTKSEVSWNALISG---HAR 267
Query: 430 AELGEIAARHLL 441
GE A HLL
Sbjct: 268 KGEGE-HALHLL 278
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 33/252 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ A+ FD +P K++ W +LI H ++ L KM R + FT+SSV
Sbjct: 239 HMDAAQLAFDGMP-TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVF 297
Query: 111 NACARVPSLLEA---------------------VICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA + +L + ++ Y K G +DDA+R+FD + + +V+
Sbjct: 298 SACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVV 357
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
SW+ M+ G A G K + +++M E N ++++ ++ G + E F+ +
Sbjct: 358 SWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM 417
Query: 206 S----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
EPD + + G A + M E A++G AC ++
Sbjct: 418 KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLG---ACRMHKNM 474
Query: 262 EMAAILAKHVDE 273
E+ A+ E
Sbjct: 475 ELGVYAAERAFE 486
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 240/439 (54%), Gaps = 15/439 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
LS A VF++ + + W S+I V ++I +Y +M V + T +++
Sbjct: 209 LSVAYDVFNK-SRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMIS 267
Query: 112 ACARVP--SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+C++V +L + C + GL E + +A++ Y CG + A+
Sbjct: 268 SCSQVQDLNLGKEFHCYIKEHGL------------EFTIPLTNALMDMYVKCGELLTARV 315
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D M +K V+W M+ GY + G + A+++ +I E W A+ VQ K A
Sbjct: 316 LFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEA 375
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ ++ M+ + +V MV +SAC+QLG +++ + +++ + AL+ M
Sbjct: 376 LALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDM 435
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG + A + F I ++ ++++++I A HG +Q+AL F KM + GI P+++TF
Sbjct: 436 YAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITF 495
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL+AC HGGLVE+G K F M+ F + P +H +CMVDLLGR+G LE+A L+ +
Sbjct: 496 LGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
DA GAL AC+V+ N ++GE A LLE+ P+ +GN LLA++Y+ WK++
Sbjct: 556 MAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARS 615
Query: 470 VKMMISETEKKKSPGCSWI 488
+ ++++ +K+PGCS +
Sbjct: 616 ARKLMNDKGVEKTPGCSLV 634
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 176/413 (42%), Gaps = 85/413 (20%)
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ A+M G++ +GF S ++ CA S +D R+ + E NV
Sbjct: 76 IQAQMVSTGLIENGFAASRLVAFCALSES------------KELDYCTRILYRIKELNVF 123
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMT-----EKNSVTWVAMIAG---------------- 188
SW+A + GY G+++ Y RM + ++ T+ ++ G
Sbjct: 124 SWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGH 183
Query: 189 ---YG----------------KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+G CGE+ A VF++ D W +M V+ G A A
Sbjct: 184 VLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEA 243
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
I++YK M E VR +E+ M+G IS+C+Q+ D+ + ++ E + T ++NAL+ M
Sbjct: 244 IKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDM 303
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG------------------------ 325
+ KCG L A F + K ++S+++M+ +A G
Sbjct: 304 YVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAII 363
Query: 326 -------KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
+ +EAL +F +M+ IEP++VT + L+ACS G ++ G + R +
Sbjct: 364 SGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKL 422
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
T +VD+ + G + +A + + + TW A++ +H NA+
Sbjct: 423 SIDVALGTALVDMYAKCGNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQ 474
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 223/402 (55%), Gaps = 14/402 (3%)
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
YA+MH LG+L FT VL +CA + + +C +G Q L + E +
Sbjct: 95 YARMHFLGLLGDNFTLPFVLKSCADL-----SRVC----MGRCVHGQGLRVGL-EGDFYV 144
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
++++ Y CG + A++ +D+M ++ +W A+IAGY K GE+ A+ +F+ + +
Sbjct: 145 GASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI 204
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQEN--VRISEVAMVGAISACTQLGDVEMAAILA 268
W AM Y QNG+A+ A+ ++ M Q+ ++ + V +V + AC Q +E +
Sbjct: 205 VSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIH 264
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI--KNKDVISYSSMITAFADHGK 326
+ + V AL M++KC L A F I K++I++++MITA+A HG
Sbjct: 265 DFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGC 324
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
EA+ +F M G++P+ VTF+G+L+ CSH GL++ G F M + ++P EH
Sbjct: 325 GVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYA 384
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
C+VDLLGR+G+L +A LI WGALL AC+ H N E+ E+AAR L L P+
Sbjct: 385 CVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPD 444
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+GN LL+N+YA G W++ + ++ ++ KKSPGCSWI
Sbjct: 445 NSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWI 486
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 255/490 (52%), Gaps = 20/490 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDN----LSYARQVFDQ 61
L+ + K+ LKQ+H++LLKT Q Y L+ + G + SYA +F
Sbjct: 13 LLRKCKSVQHLKQIHAHLLKTYL---SQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKN 69
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
+ + + F++ S+IR + L +Q+IL Y + G L + +TF ++ ACA V L+
Sbjct: 70 LQQ-RNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELK 128
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
+IG + A + E + SA+V Y+ ++K A+ +D+ + K+ V
Sbjct: 129 -------RIGYLVHAHVIVLGY-ENDAFVVSALVEFYS-LFDLKVARVLFDKSSGKDVVV 179
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W M+ GYGK G++ A+ +FDE+ E + W+AM Y + + + +++ M+++N+
Sbjct: 180 WTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNI 239
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
++ + ++AC LG + + + D ++ AL+ M+SKCGY++ A
Sbjct: 240 VPNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALE 299
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F I NKD ++++MI+ FA G ++L++F KM G + + TF+ +L AC+H +
Sbjct: 300 VFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKM 359
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI---MDYKDFCDAGTWG 418
VE G + F+ M V+ ++P EH C+VDL+ R+G +E A + M DA WG
Sbjct: 360 VERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWG 419
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
A+L AC+ + N E+G+ L LG G L NI++ G+ ++ V+ SE
Sbjct: 420 AILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEAR 479
Query: 479 KKKSPGCSWI 488
KK PGCS I
Sbjct: 480 SKKIPGCSVI 489
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 242/437 (55%), Gaps = 15/437 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM--HRLGVLTSGFTFSSVLNA 112
AR++FD+ P + W +LI +V + +++ L+ +M V T + ++
Sbjct: 179 ARRLFDRSP-VRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSG 237
Query: 113 CARVPSL-LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
C ++ L L + G+ + RL +++ + Y CG+++ AK +
Sbjct: 238 CGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDM-----------YIKCGSLEMAKSVF 286
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+R+ + V+W MI G+ K G + +A+KVFDE+ E D W A+ YVQ K A+
Sbjct: 287 ERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALS 346
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ M++ +V E+ MV ++AC+QLG +EM + +++++ + + +LI M++
Sbjct: 347 LFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYA 406
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG ++ A F I K+ +++++MI A+HG + EA++ F M G +P+++TFIG
Sbjct: 407 KCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIG 466
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL+AC H GLV++G + F LM + ++ +H +CM+DLLGR+G L++A L+
Sbjct: 467 VLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPME 526
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
DA WGA+ AC++ N LGE AA L+E+ P +G LLAN+YA K ++ V+
Sbjct: 527 PDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVR 586
Query: 472 MMISETEKKKSPGCSWI 488
M+ +K PGCS I
Sbjct: 587 AMMRHLGVEKVPGCSCI 603
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 223 NGYAKAAIEMYK-VMRQENVRISEVAMVGAISACTQL-----GDVEMAAILAKHVDEGCC 276
+G + + +Y+ ++R R + + AC +L GD +A +L +D
Sbjct: 102 HGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDV- 160
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
+V NA H S G ++ A R F R +D++S++++I + G EAL++F +
Sbjct: 161 ----FVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWR 216
Query: 337 MRNEG--IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
M E + P++VT I ++ C +E G ++ G+ + ++D+ +
Sbjct: 217 MVAEDAVVRPDEVTMIAAVSGCGQMRDLELG-RRLHGFVDSDGVSCTVRLMNALMDMYIK 275
Query: 395 SGQLEKAHSLI 405
G LE A S+
Sbjct: 276 CGSLEMAKSVF 286
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 233/436 (53%), Gaps = 15/436 (3%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
RQVFD++ + LWT +IR +V +++ L+ M +G+ S+V++AC
Sbjct: 145 GRQVFDEM-RQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACG 203
Query: 115 RVPSL--LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ L +A+ C K G+ DA F S S +++ Y CG++ A F+
Sbjct: 204 LLGDLGVAKAMHCFIEKSGIEVDA---FVS---------STLISTYGECGSLDYAYRFFQ 251
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
KN V W MI + + K++F + + D W +M + + G + A+
Sbjct: 252 ETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTW 311
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M V + + ++ +SAC G ++ A + +VD+ +R + ++LI M+SK
Sbjct: 312 FHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSK 371
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG +D A + F +D+ +++S++ A HG+ ++AL F KM+ ++P+ VT +GV
Sbjct: 372 CGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGV 431
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+AC+H GL++ G F+ M +VFG+ P EH CMVDLLGR G L++A+ LIM
Sbjct: 432 LSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEA 491
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
+ WGA L AC+VH N ELGE+AAR LL L P +L+N+YA KW S ++
Sbjct: 492 NEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRK 551
Query: 473 MISETEKKKSPGCSWI 488
I + KKSPGCS I
Sbjct: 552 EIKKKGLKKSPGCSSI 567
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 75/331 (22%)
Query: 65 CKTQFLWTSLIRNHVLHAHFRQ--SILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA 122
C F+W ++IR V + + +L Y + R G+ +G TF LL+A
Sbjct: 51 CANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMY----------LLKA 100
Query: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182
++ G + E + S + G+A EF
Sbjct: 101 LVSG--------------QEVKEGEEVHASVVRTGFA-------CSEFVSG--------- 130
Query: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A++ Y CG V + ++VFDE+ +P W + YV + + A+E+++ MR+ +
Sbjct: 131 -ALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLT 189
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
VA+ +SAC LGD+ +A + +++ + +VS+ LI + +CG LD A+R
Sbjct: 190 PDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRF 249
Query: 303 FSR-------------------------------IKNKDVISYSSMITAFADHGKSQEAL 331
F + ++DV+S++SMI FA G+ QEAL
Sbjct: 250 FQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEAL 309
Query: 332 DMFLKMRNEGIEPNQVTFIGVLTAC-SHGGL 361
F +M G+ PN +T + L+AC SHG L
Sbjct: 310 TWFHEMEFSGVSPNALTLLSTLSACASHGAL 340
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
+ +VS AL+ + CG + + F ++ ++ ++ +I A+ ++AL++F MR
Sbjct: 125 SEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMR 184
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVED--GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
G+ P+ V V++AC GL+ D K GI+ + ++ G G
Sbjct: 185 EVGLTPDMVAISTVVSAC---GLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECG 241
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK---TGNSAL 453
L+ A+ + + W ++ H N ELG + L + P++ + NS +
Sbjct: 242 SLDYAYRFFQE-TPMKNIVVWNTMIHQSVEHNNLELG----KQLFQSMPDRDVVSWNSMI 296
Query: 454 LANIYASMGKWKDS 467
+A +G+++++
Sbjct: 297 GG--FARIGQYQEA 308
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 240/439 (54%), Gaps = 15/439 (3%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
LS A VF++ + + W S+I V ++I +Y +M V + T +++
Sbjct: 209 LSVAYDVFNK-SRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMIS 267
Query: 112 ACARVP--SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+C++V +L + C + GL E + +A++ Y CG + A+
Sbjct: 268 SCSQVQDLNLGKEFHCYIKEHGL------------EFTIPLTNALMDMYVKCGELLTARV 315
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+D M +K V+W M+ GY + G + A+++ +I E W A+ VQ K A
Sbjct: 316 LFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEA 375
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+ ++ M+ + +V MV +SAC+QLG +++ + +++ + AL+ M
Sbjct: 376 LALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDM 435
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG + A + F I ++ ++++++I A HG +Q+AL F KM + GI P+++TF
Sbjct: 436 YAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITF 495
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVL+AC HGGLVE+G K F M+ F + P +H +CMVDLLGR+G LE+A L+ +
Sbjct: 496 LGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
DA GAL AC+V+ N ++GE A LLE+ P+ +GN LLA++Y+ WK++
Sbjct: 556 MAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARS 615
Query: 470 VKMMISETEKKKSPGCSWI 488
+ ++++ +K+PGCS +
Sbjct: 616 ARKLMNDKGVEKTPGCSLV 634
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 176/413 (42%), Gaps = 85/413 (20%)
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ A+M G++ +GF S ++ CA S +D R+ + E NV
Sbjct: 76 IQAQMVSTGLIENGFAASRLVAFCALSES------------KELDYCTRILYRIKELNVF 123
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMT-----EKNSVTWVAMIAG---------------- 188
SW+A + GY G+++ Y RM + ++ T+ ++ G
Sbjct: 124 SWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGH 183
Query: 189 ---YG----------------KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+G CGE+ A VF++ D W +M V+ G A A
Sbjct: 184 VLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEA 243
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
I++YK M E VR +E+ M+G IS+C+Q+ D+ + ++ E + T ++NAL+ M
Sbjct: 244 IKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDM 303
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG------------------------ 325
+ KCG L A F + K ++S+++M+ +A G
Sbjct: 304 YVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAII 363
Query: 326 -------KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
+ +EAL +F +M+ IEP++VT + L+ACS G ++ G + R +
Sbjct: 364 SGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKL 422
Query: 379 KPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
T +VD+ + G + +A + + + TW A++ +H NA+
Sbjct: 423 SIDVALGTALVDMYAKCGNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQ 474
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 246/503 (48%), Gaps = 67/503 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+ +++R +F QI K F W + R + + ++I LY M R G L ++F VL
Sbjct: 76 DFAFSRTLFFQIHKPNV-FSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVL 134
Query: 111 NACARVPSLL----------------------EAVICGYTKIGLMDDAQRLFDSMAE--R 146
ACAR+ SLL A+I ++ G ++ A+ +FD + R
Sbjct: 135 KACARL-SLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVR 193
Query: 147 NVISWSAMVAGYANCGNMKAA-KEFYDRMTE----KNSVTWVA----------------- 184
+V+SW++M++GY + A K F++ + + + VT V+
Sbjct: 194 DVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKI 253
Query: 185 ------------------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
+I Y KCG++ +A+KVFD I + CW +M Y Q+
Sbjct: 254 HGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLF 313
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
K AIE+++ M+ + +SAC G + + + + + NAL
Sbjct: 314 KEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNAL 373
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN-EGIEPN 345
I M+SKCG + A F + D+ S+S++I+ A +G+S +AL +F +M I PN
Sbjct: 374 IGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPN 433
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
++TF+GVL AC+HGG V+ G F MT+++ + P EH CMVDLLGR+ L +A I
Sbjct: 434 EITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFI 493
Query: 406 MDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
D W +LL AC+ H N EL E AA+ + EL P + G LL+N+YAS +W
Sbjct: 494 RTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWG 553
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D + V+ ++ KK PGCS++
Sbjct: 554 DVKRVRKDMATQRIKKQPGCSFV 576
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 261/489 (53%), Gaps = 22/489 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ + NQLKQ H+ +LK+ H+ ++ L + +LS+A ++F I
Sbjct: 11 LLHKCINMNQLKQAHAQVLKS--GLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQH- 67
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--LLEAV 123
T ++ ++I+ +L F +I +++ + R G+ +T VL A AR+ + L E++
Sbjct: 68 PTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESI 127
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV 183
K+G + N ++++ Y + NM++A++ +D M E ++V+W
Sbjct: 128 HACTIKLG------------SAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWT 175
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
MI GY G+V A+++FD + D W AM YVQN K + M+++M+ V
Sbjct: 176 VMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEP 235
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
E +V +SAC +G ++ + +++ T VS LI M++KCG+LDLA F
Sbjct: 236 DEAIIVTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLF 295
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ + +D + +++MI+ A G + A+ +F++M GI+P+ +TFI V ACS+ G+V+
Sbjct: 296 NEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVD 355
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC----DAGTWGA 419
+G + + M+ V I+P +EH C++DLL R G+ E+A +I +A W A
Sbjct: 356 EGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRA 415
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
L AC H + E+AA L +L +G LL+N+YA++GK +D++ V+ M+
Sbjct: 416 FLSACCKHGQTQQAEVAAERLFQL-ERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGV 474
Query: 480 KKSPGCSWI 488
+K PGCS I
Sbjct: 475 EKVPGCSSI 483
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 246/483 (50%), Gaps = 48/483 (9%)
Query: 1 MTSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFD 60
M S+ L S QLK++H+ +L+T ++ Q L L+ + GD + YARQVFD
Sbjct: 12 MLSELLRASSSKPKQLKKIHAIVLRT--GFSEKNSLLTQLLENLVVI-GD-MCYARQVFD 67
Query: 61 QIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL 120
++ K + FLW +L + +V + +S+LLY KM LGV FT+ V+ A +++
Sbjct: 68 EMHKPRI-FLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDF- 125
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV 180
CG+ +V+ + G+ G +
Sbjct: 126 ---SCGFA---------------LHAHVVKY-----GFGCLG-----------------I 145
Query: 181 TWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
++ Y K GE+ A+ +F+ + D W A VQ G + A+E + M +
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 241 VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAW 300
V+ +V +SAC QLG +E+ + + D V NA + MH KCG + A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F +K ++V+S+S+MI +A +G S+EAL +F M+NEG+ PN VTF+GVL+ACSH G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 361 LVEDGCKQFELMTRVF--GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
LV +G + F LM + ++P EH CMVDLLGRSG LE+A+ I D G WG
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETE 478
ALLGAC VH + LG+ A L+E P+ LL+NIYA+ GKW + V+ + +
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 479 KKK 481
KK
Sbjct: 446 TKK 448
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 145/343 (42%), Gaps = 55/343 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
LS A +F+ + + K W + + V + ++ + KM V FT S+L+
Sbjct: 160 LSSAEFLFESM-QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLS 218
Query: 112 ACARVPSL-----------LEAVICG----------YTKIGLMDDAQRLFDSMAERNVIS 150
AC ++ SL E + C + K G + A+ LF+ M +RNV+S
Sbjct: 219 ACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVS 278
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVF---- 202
WS M+ GYA G+ + A + M + N VT++ +++ G V E K+ F
Sbjct: 279 WSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMV 338
Query: 203 ---DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQL 258
D+ EP +A M ++G + A E K M E + + GA + AC
Sbjct: 339 QSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVE----PDTGIWGALLGACAVH 394
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK---NKDVISYS 315
D+ + +A + E D +Y L ++++ G D + S+++ K V +YS
Sbjct: 395 RDMILGQKVADVLVETAPDIGSY-HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYS 453
Query: 316 SM-----ITAFADHGKSQ-------EALDMFL-KMRNEGIEPN 345
S+ I F KS E LD L K+R G P+
Sbjct: 454 SVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPD 496
>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
Length = 657
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 250/486 (51%), Gaps = 71/486 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILL--YAKMHRLG-VLTSGFTFSSVLN 111
AR+VFD +P T LW +L+ A S+ L + +M +G V T +S L
Sbjct: 168 ARKVFDAVPSPDT-ILWNTLL------AGLPGSVALEAFVRMVEVGRVRPDSTTLASSLR 220
Query: 112 ACARVPSLL-----------------EAVICG----YTKIGLMDDAQRLFDSMAERNVIS 150
A A + E V+ G Y+K G MD A+ LFD M + ++++
Sbjct: 221 AAAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDCARSLFDRMEDPDLVA 280
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCG------------- 193
++A+++GY+ G ++++ E + + NS T VA+I Y G
Sbjct: 281 YNALISGYSVNGMVESSVELFKELAASDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVV 340
Query: 194 ----------------------EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
++ A+ +FD + E W AM Y QNG + A+E
Sbjct: 341 KARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVE 400
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++++M++ NV+ + + +SAC QLG + + + + + + + YV ALI M++
Sbjct: 401 LFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYA 460
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG + A F R+ NK+V+S+++MI+ + HG+ EAL ++ M + I P TF+
Sbjct: 461 KCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLS 520
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY-KD 410
VL ACSHGGLV++G K F +MT + I P EH TCMVDLLGR+G+L +A LI ++ +
Sbjct: 521 VLYACSHGGLVDEGQKVFRVMTNEYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQS 580
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
G WGALL AC VH N++L ++A++ L EL E G LL+N+Y S + ++ +
Sbjct: 581 AIGPGVWGALLSACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVG 640
Query: 471 KMMISE 476
+ ++ E
Sbjct: 641 QYLLIE 646
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 155/341 (45%), Gaps = 46/341 (13%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV------ 180
Y K+ +DDA+++FD++ + I W+ ++AG A E + RM E V
Sbjct: 159 YFKLSKVDDARKVFDAVPSPDTILWNTLLAGLPG----SVALEAFVRMVEVGRVRPDSTT 214
Query: 181 -----------TWVAM---IAGYG--------------------KCGEVREAKKVFDEIS 206
+ VAM + GYG KCG++ A+ +FD +
Sbjct: 215 LASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDCARSLFDRME 274
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
+PD + A+ Y NG ++++E++K + + R + +V I + G +A
Sbjct: 275 DPDLVAYNALISGYSVNGMVESSVELFKELAASDWRPNSSTLVAVIPVYSPFGHELLARC 334
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
L V + D VS AL ++ + ++ A F + K + S+++MI+ +A +G
Sbjct: 335 LHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMISGYAQNGL 394
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
++ A+++F M+ ++PN T L+AC+ G + G ++ + ++ +T
Sbjct: 395 TEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKE-NLELNVYVMT 453
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++D+ + G + +A S I D D + +W A++ +H
Sbjct: 454 ALIDMYAKCGSIAEARS-IFDRMDNKNVVSWNAMISGYGLH 493
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 26/178 (14%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+++ AR +FD +P+ KT W ++I + + ++ L+ M L V + T SS
Sbjct: 362 NDMESARSIFDAMPE-KTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISST 420
Query: 110 LNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNV 148
L+ACA++ +L + A+I Y K G + +A+ +FD M +NV
Sbjct: 421 LSACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV 480
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVF 202
+SW+AM++GY G A + Y M + S T+++++ G V E +KVF
Sbjct: 481 VSWNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVF 538
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/534 (30%), Positives = 260/534 (48%), Gaps = 73/534 (13%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
QVH+ ++K D+ + LI L L N+ AR +FD+ + K+ W S+I
Sbjct: 219 QVHTVVVKN---GLDKTIPVSNSLINLY-LKCGNVRKARILFDK-TEVKSVVTWNSMISG 273
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL----------------- 120
+ + +++ ++ M V S +F+S++ CA + L
Sbjct: 274 YAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFD 333
Query: 121 ----EAVICGYTKIGLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
A++ Y+K M DA RLF NV+SW+AM++G+ + A + M
Sbjct: 334 QNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMK 393
Query: 176 -----------------------------------EKNSVTWVAMIAGYGKCGEVREAKK 200
E++S A++ Y K G+V EA K
Sbjct: 394 RKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAK 453
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL-- 258
VF I D W+AM Y Q G +AAI+++ + + V+ +E ++ C
Sbjct: 454 VFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTA 513
Query: 259 ----GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
G + +D C VS+AL+ M++K G+++ A F R + KD++S+
Sbjct: 514 SMGQGKQFHGFAIKSRLDSSLC-----VSSALLTMYAKKGHIESAEEVFKRQREKDLVSW 568
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+SMI+ +A HG++ +ALD+F +M+ ++ + VTFIGV AC+H GLVE+G K F++M R
Sbjct: 569 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVR 628
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
I P EH +CMVDL R+GQLEKA +I + + + W +L AC+VH ELG
Sbjct: 629 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGR 688
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+AA ++ + PE + LL+N+YA G W++ V+ +++E KK PG SWI
Sbjct: 689 LAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 742
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 199/449 (44%), Gaps = 75/449 (16%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
+ G N R VFD++ K + WT+LI + ++ + + L+ +M G + FTF
Sbjct: 143 MKGSNFKDGRNVFDEM-KERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTF 201
Query: 107 SSVL---------------------NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE 145
++ L N + + ++I Y K G + A+ LFD
Sbjct: 202 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 261
Query: 146 RNVISWSAMVAGYANCG-NMKAAKEFYD------RMTEKNSVTWV--------------- 183
++V++W++M++GYA G +++A FY R++E + + +
Sbjct: 262 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQL 321
Query: 184 -----------------AMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGY 225
A++ Y KC + +A ++F E + W AM ++QN
Sbjct: 322 HCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDG 381
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
+ A+ ++ M+++ VR +E ++A + E+ A + K E R++ V A
Sbjct: 382 KEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYE----RSSTVGTA 437
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPN 345
L+ + K G +D A + FS I NKD++++S+M+ +A G+++ A+ +F ++ G++PN
Sbjct: 438 LLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPN 497
Query: 346 QVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC----MVDLLGRSGQLEKA 401
+ TF +L C+ KQF F IK + C ++ + + G +E A
Sbjct: 498 EFTFSSILNVCAATTASMGQGKQFH----GFAIKSRLDSSLCVSSALLTMYAKKGHIESA 553
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNA 430
+ ++ D +W +++ H A
Sbjct: 554 EEVFKRQRE-KDLVSWNSMISGYAQHGQA 581
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 156/365 (42%), Gaps = 62/365 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L YA +FD+ P + + +TSL+ +++ L+ + LG+ FSSVL
Sbjct: 47 LYYAHNLFDKSPD-RDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLK 105
Query: 112 ACARVPSLL--EAVICGYTKIGLMDD-------------------AQRLFDSMAERNVIS 150
A + L + C K G +DD + +FD M ERNV++
Sbjct: 106 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVT 165
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVA---------------------- 184
W+ +++GYA + + RM T+ NS T+ A
Sbjct: 166 WTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 225
Query: 185 -------------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
+I Y KCG VR+A+ +FD+ W +M Y NG A+
Sbjct: 226 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 285
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
M+ MR +VR+SE + I C L ++ L V + + AL+ +S
Sbjct: 286 MFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYS 345
Query: 292 KCGYLDLAWREFSRIKN-KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
KC + A R F +V+S+++MI+ F + +EA+ +F +M+ +G+ PN+ T+
Sbjct: 346 KCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYS 405
Query: 351 GVLTA 355
+LTA
Sbjct: 406 VILTA 410
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 157 GYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASC 212
G A+ + A +D+ +++ ++ +++ G+ + G +EA ++F I E D S
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99
Query: 213 WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVD 272
+++ V A E++ RQ + + + + +S T L D M
Sbjct: 100 FSS-----VLKVSATLCDELFG--RQLHCQCIKFGFLDDVSVGTSLVDTYMKG------- 145
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
+N+ + F +K ++V++++++I+ +A + ++E L
Sbjct: 146 ------SNFKDGRNV---------------FDEMKERNVVTWTTLISGYARNSLNEEVLT 184
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF--GIKPLTEHLTCMVD 390
+F++M++EG +PN TF L + G+ G + ++ T V G+ +++
Sbjct: 185 LFMRMQDEGTQPNSFTFAAALGVLAEEGV---GGRGLQVHTVVVKNGLDKTIPVSNSLIN 241
Query: 391 LLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
L + G + KA ++ D + TW +++
Sbjct: 242 LYLKCGNVRKAR-ILFDKTEVKSVVTWNSMI 271
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 235/426 (55%), Gaps = 21/426 (4%)
Query: 69 FLWTSLIR----NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI 124
F+W +LIR + V + F ++ LY +M VL TF P LL+++
Sbjct: 25 FVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTF----------PFLLQSIN 74
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
+ G AQ L +A + ++++ Y++CG A++ +D +T+ + +W A
Sbjct: 75 TPHR--GRQLHAQILLLGLANDPFVQ-TSLINMYSSCGTPTFARQAFDEITQPDLPSWNA 131
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ---ENV 241
+I K G + A+K+FD++ E + W+ M YV G KAA+ +++ ++ +
Sbjct: 132 IIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQL 191
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
R +E M +SAC +LG ++ + ++D+ + +LI M++KCG ++ A
Sbjct: 192 RPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKC 251
Query: 302 EFSRI-KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F + KDV+++S+MITAF+ HG S+E L++F +M N+G+ PN VTF+ VL AC HGG
Sbjct: 252 IFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGG 311
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
LV +G + F+ M +G+ P+ +H CMVDL R+G++E A +++ D WGAL
Sbjct: 312 LVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGAL 371
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKK 480
L ++H + E EIA LLEL P + LL+N+YA +G+W++ ++ ++ K
Sbjct: 372 LNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIK 431
Query: 481 KSPGCS 486
K PGCS
Sbjct: 432 KLPGCS 437
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 26/179 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ A+ +FD + K W+++I +H + + L+A+M GV + TF +VL
Sbjct: 245 SIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVL 304
Query: 111 NACAR-------------------VPSLLEAVICG---YTKIGLMDDAQRLFDSMA-ERN 147
AC V +++ C Y++ G ++DA + SM E +
Sbjct: 305 CACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPD 364
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTE---KNSVTWVAMIAGYGKCGEVREAKKVFD 203
V+ W A++ G G+++ + ++ E NS +V + Y K G RE + + D
Sbjct: 365 VMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRD 423
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 249/469 (53%), Gaps = 36/469 (7%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+++ AR+VFD+IP+ + + +IR++V + + + + ++ M V +TF VL
Sbjct: 89 DVASARKVFDEIPE-RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 111 NACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
AC+ +++ ++ Y K G + +A+ + D M+ R+V+
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 150 SWSAMVAGYAN----------CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAK 199
SW+++V GYA C M++ K +D T + + V+ V K
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT----TENVMYVK 263
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
+F ++ + W M Y++N A+E+Y M + V++ + AC
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+ + + +++ + NALI M++KCG L+ A F +K++DV+S+++MI+
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK 379
A+ G+ +A+ +F K+++ G+ P+ + F+ L ACSH GL+E+G F+LMT + I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 380 PLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARH 439
P EHL CMVDLLGR+G++++A+ I D + WGALLGAC+VH + ++G +AA
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 440 LLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L +L PE++G LL+NIYA G+W++ ++ ++ KK+PG S +
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 134/340 (39%), Gaps = 80/340 (23%)
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN------- 178
Y + + A+++FD + ERNVI + M+ Y N G + + M N
Sbjct: 83 AYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYT 142
Query: 179 ----------------------SVTWV----------AMIAGYGKCGEVREAKKVFDEIS 206
S T V +++ YGKCG + EA+ V DE+S
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 202
Query: 207 EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
D W ++ V Y QN A+E+ + M E+V+IS D A
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCREM--ESVKISH--------------DAGTMAS 246
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
L V + YV + F ++ K ++S++ MI + +
Sbjct: 247 LLPAVSNTTTENVMYVKDM-----------------FFKMGKKSLVSWNVMIGVYMKNAM 289
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL- 385
EA++++ +M +G EP+ V+ VL AC + G K + R K L +L
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER----KKLIPNLL 345
Query: 386 --TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
++D+ + G LEKA + + K D +W A++ A
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%)
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
NS V ++ Y +V A+KVFDEI E + M YV NG+ ++++ M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
NVR + AC+ G + + + + T +V N L+ M+ KCG+L
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A + +DV+S++S++ +A + + +AL++ +M + I + T +L A S
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 252
Query: 358 H 358
+
Sbjct: 253 N 253
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 187/315 (59%)
Query: 174 MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
M EK+ V+ AMI Y K G + EA+ +FD + E DA CW M Y Q+G + ++
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
+ M VR +EV ++ +SAC Q G +E + +++ V +LI M+SKC
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKC 120
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L+ A F RI NKDV++++SM+ +A HG SQ+AL +F +M G +P +TFIGVL
Sbjct: 121 GSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL 180
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
ACSH GLV +G K F M +GI+P EH CMV+LLGR+G LE+A+ L+ + + D
Sbjct: 181 NACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQD 240
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
WG LLGAC++H N LGE A +L+ +G LL+NIYA+ G W+ V+ +
Sbjct: 241 PVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTL 300
Query: 474 ISETEKKKSPGCSWI 488
+ E+ +K PGCS I
Sbjct: 301 MKESGFEKEPGCSSI 315
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 41/248 (16%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----T 175
L A+I Y K G++D+A+ LFD + ER+ I W+ M+ GYA G + +M
Sbjct: 9 LTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68
Query: 176 EKNSVT------------------WV-----------------AMIAGYGKCGEVREAKK 200
N VT WV ++I Y KCG + +A+
Sbjct: 69 RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
VF+ IS D W +M V Y +G+++ A+ ++K M + +++ +G ++AC+ G
Sbjct: 129 VFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGL 188
Query: 261 V-EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK-NKDVISYSSMI 318
V E DE + ++++ + GYL+ A+ ++ ++D + + +++
Sbjct: 189 VSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLL 248
Query: 319 TAFADHGK 326
A HG
Sbjct: 249 GACRLHGN 256
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 127/284 (44%), Gaps = 41/284 (14%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR +FD + + + W +I + H + +LL+ +M V + T +VL+AC
Sbjct: 25 ARVLFDGLEE-RDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACG 83
Query: 115 R---------VPSLLE------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ V S +E ++I Y+K G ++DA+ +F+ ++ ++V++W++
Sbjct: 84 QTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNS 143
Query: 154 MVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKVF----DEI 205
MV GYA G + A + M + +T++ ++ G V E K F DE
Sbjct: 144 MVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEY 203
Query: 206 S-EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA 264
EP + M + GY + A E+ K M + + ++G AC G++ +
Sbjct: 204 GIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLG---ACRLHGNIALG 260
Query: 265 AILAKH-VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+A++ V + + YV L ++++ G W +R++
Sbjct: 261 EQIAEYLVSQNLANSGTYV--LLSNIYAAAG----NWEGVARVR 298
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L AR VF++I K W S++ + +H + ++ L+ +M +G + TF VL
Sbjct: 122 SLEDARLVFERISN-KDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVL 180
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA-----ERNVISWSAMVAGYANCGNMK 165
NAC+ GL+ + + F SM E V + MV G ++
Sbjct: 181 NACSHA--------------GLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLE 226
Query: 166 AAKEFYDRM-TEKNSVTWVAMIA 187
A E M +++ V W ++
Sbjct: 227 EAYELVKNMEIDQDPVLWGTLLG 249
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 249/516 (48%), Gaps = 65/516 (12%)
Query: 37 YAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR 96
Y Q + + + + AR VFD + K + W ++I + + + +++++ M
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFD-VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN 211
Query: 97 LGVLTSGFTFSSVLNACARVPSL---------------------LEAVICGYTKIGLMDD 135
V T S+L C + L A++ Y K G MD+
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVT---------- 181
A+ +FD M R+VI+W+ M+ GY G+++ A E M N+VT
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 182 ------------W-------------VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
W ++I+ Y KC V +VF S+ W+A+
Sbjct: 332 ALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAI 391
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
VQN A+ ++K MR+E+V + + + A L D+ A + ++ +
Sbjct: 392 IAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF 451
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRI----KNKDVISYSSMITAFADHGKSQEALD 332
+ + L+H++SKCG L+ A + F+ I K+KDV+ + ++I+ + HG AL
Sbjct: 452 MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQ 511
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F++M G+ PN++TF L ACSH GLVE+G F M + + H TC+VDLL
Sbjct: 512 VFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLL 571
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR+G+L++A++LI + WGALL AC H N +LGE+AA L EL PE TGN
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYV 631
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LLANIYA++G+WKD E V+ M+ +K PG S I
Sbjct: 632 LLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 148/317 (46%), Gaps = 44/317 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV--LTSGFTFSS 108
+++YAR++F+++P+ + + +IR +V + +I ++ +M GV + G+T+
Sbjct: 64 HITYARKLFEEMPQ-SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
V A + S+ K+GL+ R+ S R+ +A++A Y N G
Sbjct: 123 VAKAAGELKSM---------KLGLVVHG-RILRSWFGRDKYVQNALLAMYMNFG------ 166
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+V A+ VFD + D W M Y +NGY
Sbjct: 167 -------------------------KVEMARDVFDVMKNRDVISWNTMISGYYRNGYMND 201
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+ M+ M E+V + +V + C L D+EM + K V+E V NAL++
Sbjct: 202 ALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ KCG +D A F R++ +DVI+++ MI + + G + AL++ M+ EG+ PN VT
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 349 FIGVLTACSHGGLVEDG 365
+++ C V DG
Sbjct: 322 IASLVSVCGDALKVNDG 338
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 119/250 (47%), Gaps = 11/250 (4%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y CG + A+K+F+E+ + + + YV+ G AI ++ M E V+
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 249 VGAI--SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
A +L +++ ++ + R YV NAL+ M+ G +++A F +
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
KN+DVIS+++MI+ + +G +AL MF M NE ++ + T + +L C H +E G
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 367 KQFELM-TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+L+ + G K E +V++ + G++++A + D + D TW C
Sbjct: 239 NVHKLVEEKRLGDK--IEVKNALVNMYLKCGRMDEAR-FVFDRMERRDVITW-----TCM 290
Query: 426 VHVNAELGEI 435
++ E G++
Sbjct: 291 INGYTEDGDV 300
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 93/258 (36%), Gaps = 76/258 (29%)
Query: 2 TSKYLVPRSKTFNQLKQ---VHSYLLKT-----LTKPHDQYHYYAQFLIRLLQLPGDNLS 53
T L+P L+Q +H YL KT L H Y++ L
Sbjct: 422 TLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC---------GTLE 472
Query: 54 YARQVFDQIP---KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
A ++F+ I K K LW +LI + +H ++ ++ +M R GV + TF+S L
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSAL 532
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
NAC+ GL+++ LF M E
Sbjct: 533 NACSHS--------------GLVEEGLTLFRFMLEH------------------------ 554
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAA 229
Y + N T + + G+ G + EA + I EP ++ W A+ V
Sbjct: 555 YKTLARSNHYTCIVDL--LGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVT------- 605
Query: 230 IEMYKVMRQENVRISEVA 247
ENV++ E+A
Sbjct: 606 --------HENVQLGEMA 615
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 248/497 (49%), Gaps = 69/497 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VF ++ + + W +L+ VL+ +++ L+ + + T+S+V+N CA
Sbjct: 211 ARVVFCRM-ETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCA 269
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMA-ERNVISWS 152
+ L + A++ Y K G +D A +F M+ +NV+SW+
Sbjct: 270 NLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWT 329
Query: 153 AMVAGYANCGNMKAAKEFYDRMTE----KNSVTW-------------------------- 182
AM+ G G++ A + RM E N +T+
Sbjct: 330 AMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYEC 389
Query: 183 -----VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
A++ Y K EA +F I + D W+AM CY Q G A + M
Sbjct: 390 TPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMT 449
Query: 238 QENVRISEVAMVGAISAC------TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ +E + AI AC LG + AI KH C VS+AL+ M++
Sbjct: 450 MHGLKPNEFTISSAIDACASPAAGVDLGR-QFHAISIKHR----CHDALCVSSALVSMYA 504
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
+ G ++ A F R ++D++S++SM++ +A HG SQ+ALD+F +M EGI+ + +TF+
Sbjct: 505 RKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLS 564
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
V+ C+H GLVE+G + F+LM R +GI P +H CMVDL R+G+L++ SLI
Sbjct: 565 VIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFP 624
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
W ALLGAC+VH N ELG++AA LL L P + LL+NIY++ GKWK+ + V+
Sbjct: 625 AGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVR 684
Query: 472 MMISETEKKKSPGCSWI 488
++ + +K GCSWI
Sbjct: 685 KLMDTKKVRKEAGCSWI 701
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 183/437 (41%), Gaps = 73/437 (16%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN--- 111
R+VF+ + K + WTSL+ ++ + L+ +M GV + FTFSSVL+
Sbjct: 110 GRKVFEGMLK-RNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVA 168
Query: 112 ------------------ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
C + +++ Y K GL+++A+ +F M R+++SW+
Sbjct: 169 SQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNT 228
Query: 154 MVAGYA-NCGNMKAAKEFYDR------MTEKNSVTWVAMIAGYGKCGEVREA-KKVFDEI 205
++AG N +++A + F+D +TE T + + A G R+ V
Sbjct: 229 LMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHG 288
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
+ A+ Y + G A++++ +M +S AM I C Q GD+ +AA
Sbjct: 289 FHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAM---IDGCIQNGDIPLAA 345
Query: 266 IL-AKHVDEGCCD-------------------------RTNY-----VSNALIHMHSKCG 294
L ++ ++G +TNY V AL+ +SK
Sbjct: 346 ALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLC 405
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A F I KDV+S+S+M+T +A G A + F+KM G++PN+ T +
Sbjct: 406 STEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAID 465
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC----MVDLLGRSGQLEKAHSLIMDYKD 410
AC+ D +QF ++ IK C +V + R G +E A + D
Sbjct: 466 ACASPAAGVDLGRQFHAIS----IKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTD 521
Query: 411 FCDAGTWGALLGACKVH 427
D +W ++L H
Sbjct: 522 R-DLLSWNSMLSGYAQH 537
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 131/283 (46%), Gaps = 11/283 (3%)
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V + +KVF+ + + + W ++ Y+Q G + ++ MR E V + +S
Sbjct: 107 VLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSM 166
Query: 255 CTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
G V++ + A+ + GCC T +V N+L++M++KCG ++ A F R++ +D++S
Sbjct: 167 VASQGMVDLGQHVHAQSIKFGCCS-TVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVS 225
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS---HGGLVEDGCKQFE 370
+++++ +G+ EAL +F R+ + T+ V+ C+ H GL +Q
Sbjct: 226 WNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLA----RQLH 281
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
G +T ++D ++GQL+KA + + + +W A++ C + +
Sbjct: 282 SSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDI 341
Query: 431 ELGEIAARHLLELG--PEKTGNSALLANIYASMGKWKDSEIVK 471
L + E G P S +L AS ++++K
Sbjct: 342 PLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIK 384
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 138/340 (40%), Gaps = 73/340 (21%)
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA-------VICGY-- 127
+H L AH RQ G G ++ C VP + V CG+
Sbjct: 40 DHFLDAHRRQ-----------GRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDH 88
Query: 128 --TKIG--LMD---------DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
++G L+D D +++F+ M +RNV++W++++ GY G + + RM
Sbjct: 89 GDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRM 148
Query: 175 TEK----NSVTW---VAMIAG--------------------------------YGKCGEV 195
+ N T+ ++M+A Y KCG V
Sbjct: 149 RAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLV 208
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
EA+ VF + D W + V NG A++++ R ++E I+ C
Sbjct: 209 EEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLC 268
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK-NKDVISY 314
L + +A L V + V AL+ ++K G LD A F + +++V+S+
Sbjct: 269 ANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSW 328
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
++MI +G A +F +MR +G+ PN +T+ +LT
Sbjct: 329 TAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT 368
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 127/305 (41%), Gaps = 65/305 (21%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVFDQIPKCKTQFLWTSL 74
+Q+HS +LK +H Y + L+ L A VF + + WT++
Sbjct: 278 RQLHSSVLK------HGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAM 331
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC---------ARV--------P 117
I + + + L+++M GV + T+S++L A+V P
Sbjct: 332 IDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTP 391
Query: 118 SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT-- 175
++ A++ Y+K+ ++A +F + +++V+SWSAM+ YA G+ A + +MT
Sbjct: 392 TVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMH 451
Query: 176 --EKNSVTW------------------------------------VAMIAGYGKCGEVRE 197
+ N T A+++ Y + G +
Sbjct: 452 GLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIEN 511
Query: 198 AKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQ 257
A+ VF+ ++ D W +M Y Q+GY++ A+++++ M E + + + + I C
Sbjct: 512 AQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAH 571
Query: 258 LGDVE 262
G VE
Sbjct: 572 AGLVE 576
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 44/252 (17%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
W S++ + H + ++++ ++ +M G+ G TF SV+ CA
Sbjct: 527 WNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHA-------------- 572
Query: 131 GLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKEFYDRMTEKNSVT-WVA 184
GL+++ Q+ FD M I+ ++ MV Y+ G + + M T W A
Sbjct: 573 GLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRA 632
Query: 185 MIAGYGKCGEVREAKKVFDEI--SEP-DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
++ V K +++ EP D++ + ++ Y G K E+ K+M + V
Sbjct: 633 LLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKV 692
Query: 242 R----------ISEVAMVGAISACTQLGD---VEMAAILAKHVDEGCCDRTNYVSN---- 284
R ++V A L + ++ A+ AK EG C T++V +
Sbjct: 693 RKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAE 752
Query: 285 ----ALIHMHSK 292
A++ MHS+
Sbjct: 753 DQKEAMLAMHSE 764
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 248/448 (55%), Gaps = 15/448 (3%)
Query: 45 LQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSG 103
L + A F+++P + W S+I + + +++++++KM + +
Sbjct: 217 LYMQSGQFELAASQFEKMPD-RDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDN 275
Query: 104 FTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
FT +S+L+ACA + L IG A + + E + +A+++ YA G
Sbjct: 276 FTLASILSACANLEKL---------NIGKQIHAY-ILRAETETSGAVGNALISMYAKSGG 325
Query: 164 MKAAKEF--YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
++ A+ ++R + N + + +++ GY K G V+ A+++F+++ + D W AM V YV
Sbjct: 326 VEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYV 385
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
QNG A+E++++M E + + +S + L +E + + T
Sbjct: 386 QNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
V+NALI M++K G +++A R F K+++S++SMI A A HG +EA+++F +M +
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
G++P+ +T++GVL+AC+H GLVE G K + +MT V I+P H CM+DL GR+G L++
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
A+ I D WG+LL +CK+H NA+L ++AA LL + P +G LAN+Y++
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
GKW+++ + ++ + +K G SWI
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWI 653
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 168/353 (47%), Gaps = 53/353 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N +R++ ++P C WT++I + F +I ++AKM V S FT S+VL
Sbjct: 91 NFEVSRRLLYEMPDCDP-VSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVL 149
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS----WSAMVAGYANCGNMKA 166
++CA +L D +++ + + + S ++++ YA CG+
Sbjct: 150 SSCAANQTL--------------DIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVI 195
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
AK +DRMT KN TW A+I+ Y + G+ A F+++ + D W +M Y Q GY
Sbjct: 196 AKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYN 255
Query: 227 KAAIEMY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
A+ ++ K++ + +++ + +SAC L + + + ++ + + V NA
Sbjct: 256 LEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNA 315
Query: 286 LIHMHSKCGYLDLAW--------------------------------RE-FSRIKNKDVI 312
LI M++K G +++A RE F++++++DV+
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV 375
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
++++MI + +G +AL++F M NEG EPN T +L+ S ++E G
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHG 428
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 46/292 (15%)
Query: 101 TSGFTFSSVLNACARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
TS F+ +L R+ P +V C K GL V + ++ Y
Sbjct: 8 TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGL------------HLGVYLMNNLMTFY 55
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
A G+++ A +D M K++ +W +I+GY K G ++++ E+ + D W A+ V
Sbjct: 56 AKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIV 115
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-------------- 264
Y Q G AI M+ M E V S+ + +S+C +++
Sbjct: 116 GYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGS 175
Query: 265 -----------------AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++AK V + + NALI ++ + G +LA +F ++
Sbjct: 176 CVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMP 235
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSH 358
++D++S++SMI+ ++ G + EAL +F KM NE ++P+ T +L+AC++
Sbjct: 236 DRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACAN 287
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 247/482 (51%), Gaps = 49/482 (10%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT-----SGFTF 106
L AR+VFD + + + F WTSLI + +++ L+ +M V++ GF
Sbjct: 143 LDDARKVFDNMTQ-RNAFSWTSLISGYFSCGKIEEALHLFDQMPERNVVSWTMVVLGFAR 201
Query: 107 SSVLNACARVPSLL---------------------------------------EAVICGY 127
+ +++ R L+ +I G
Sbjct: 202 NGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPERNVRSWNIMISGC 261
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
+ +D+A LF+SM +RN +SW+AMV+G A + A++++D M K+ W AMI
Sbjct: 262 LRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQNKMIGIARKYFDLMPYKDMAAWTAMIT 321
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
G + EA+K+FD+I E + W M Y +N Y A+ ++ +M + R +E
Sbjct: 322 ACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVLMLRSCFRPNETT 381
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
M +++C + ++ A + H+ + +++NALI ++SK G L A F ++K
Sbjct: 382 MTSVVTSCDGMVELMQAHAMVIHLG---FEHNTWLTNALITLYSKSGDLCSARLVFEQLK 438
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+KDV+S+++MI A+++HG AL +F +M GI+P++VTF+G+L+ACSH GLV G +
Sbjct: 439 SKDVVSWTAMIVAYSNHGHGHHALQVFARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRR 498
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC-DAGTWGALLGACKV 426
F+ + + + P EH +C+VD+LGR+G +++A ++ D ALLGAC++
Sbjct: 499 LFDSIKGTYNLTPKAEHYSCLVDILGRAGLVDEAMDVVATIPPSARDEAVLVALLGACRL 558
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
H + + LLEL P +G LLAN YA+ G+W + V+ + E K+ PG S
Sbjct: 559 HGDVAIANSIGEKLLELEPSSSGGYVLLANTYAAEGQWDEFAKVRKRMRERNVKRIPGYS 618
Query: 487 WI 488
I
Sbjct: 619 QI 620
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 188/403 (46%), Gaps = 55/403 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++FD++P+ + + S+I ++ + ++ ++ +M + V+
Sbjct: 81 LDEARKLFDEMPQ-RDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNVVAES-------- 131
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A+I GY K+G +DDA+++FD+M +RN SW+++++GY +CG ++ A +
Sbjct: 132 ----------AMIDGYAKVGRLDDARKVFDNMTQRNAFSWTSLISGYFSCGKIEEALHLF 181
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
D+M E+N V+W ++ G+ + G + A + F + E + W AM Y+ NG A +
Sbjct: 182 DQMPERNVVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYK 241
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNYVS----NAL 286
++ M + NVR + IS C + V+ A + D T VS N +
Sbjct: 242 LFLEMPERNVRSWNI----MISGCLRANRVDEAIGLFESMPDRNHVSWTAMVSGLAQNKM 297
Query: 287 IHMHSK-------------------C---GYLDLAWREFSRIKNKDVISYSSMITAFADH 324
I + K C G +D A + F +I K+V S+++MI +A +
Sbjct: 298 IGIARKYFDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARN 357
Query: 325 GKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEH 384
EAL++F+ M PN+ T V+T+C G+VE Q M G + T
Sbjct: 358 SYVGEALNLFVLMLRSCFRPNETTMTSVVTSCD--GMVE--LMQAHAMVIHLGFEHNTWL 413
Query: 385 LTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++ L +SG L A L+ + D +W A++ A H
Sbjct: 414 TNALITLYSKSGDLCSAR-LVFEQLKSKDVVSWTAMIVAYSNH 455
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 61/297 (20%)
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
G+ G++ EA+K+FDE+ + D + +M Y++N A ++K M Q NV ++E AM+
Sbjct: 76 GRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNV-VAESAMI 134
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC---------------- 293
+ +L D A+ V + R + +LI + C
Sbjct: 135 DGYAKVGRLDD-------ARKVFDNMTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPER 187
Query: 294 ---------------GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
G +D A R F + K++I++++M+ A+ D+G EA +FL+M
Sbjct: 188 NVVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMP 247
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL--TCMVDLLGRSG 396
+ + +++ C V++ FE M P H+ T MV L ++
Sbjct: 248 ERNVRSWNI----MISGCLRANRVDEAIGLFESM-------PDRNHVSWTAMVSGLAQNK 296
Query: 397 QLEKAHSL--IMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
+ A +M YKD W A++ AC V+ L + AR L + PEK S
Sbjct: 297 MIGIARKYFDLMPYKDM---AAWTAMITAC---VDEGLMD-EARKLFDQIPEKNVGS 346
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 252/491 (51%), Gaps = 65/491 (13%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
T N LKQ+H+ + T ++ I + N++YA VFD+IPK + FLW
Sbjct: 24 TLNHLKQIHARIFLTGF----NHNLILSGKIIMFCAVSQNMNYALNVFDKIPKPDS-FLW 78
Query: 72 TSLIR---NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP--SLLEAVICG 126
++IR N H+H +I + +M +L FTFS +L AR+ +L + + C
Sbjct: 79 NTMIRGFGNSTTHSH--NAIHFFKRM-QLAHRPDNFTFSFILKIIARLRFVNLGKQLHCS 135
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
K G E ++ ++I
Sbjct: 136 LFKFGF-------------------------------------------ENHTYVRNSLI 152
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN-----V 241
YG ++ A ++F+E+ +P+ W ++ C+V G AI+++ M Q+ +
Sbjct: 153 HMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMEL 212
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS--NALIHMHSKCGYLDLA 299
+ +V +SAC +G ++ + V +G +S NAL+ M++KCG ++ A
Sbjct: 213 QPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEA 272
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE-PNQVTFIGVLTACSH 358
+ FS +K K+V+S++ MI FA HG +EAL +F +M +E +E P+++TF+ VL ACSH
Sbjct: 273 YETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSH 332
Query: 359 GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GGLV++G + FE+M R + IKP +H CMVDLLGR+G +A+ LI C+A W
Sbjct: 333 GGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWR 392
Query: 419 ALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SEIVKMMISET 477
LL AC+ + N ELGE +HL+EL P+ + + LLAN+YAS G+W + S+ + M
Sbjct: 393 TLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERR 452
Query: 478 EKKKSPGCSWI 488
+K PG S+I
Sbjct: 453 VRKPEPGNSFI 463
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 148/339 (43%), Gaps = 53/339 (15%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
++ R + N KQ+H L K + H Y LI + + D + A Q+F+++ +
Sbjct: 119 IIARLRFVNLGKQLHCSLFKFGFENHT---YVRNSLIHMYGMLKD-IEIAHQLFEEMYQ- 173
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKM-----HRLGVLTSGFTFSSVLNACARVPSL- 119
W S+I HV + ++I L+ KM + + + T L+AC + SL
Sbjct: 174 PNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLD 233
Query: 120 ----------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
A++ Y K G +++A F +M +NV+SW+ M+ G
Sbjct: 234 FGRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILG 293
Query: 158 YANCGNMKAAKEFYDRMTEKN-----SVTWVAMIAGYGKCGEVREAKKVFDEIS-----E 207
+A+ GN + A + RM +N +T++ ++ G V E ++ F+ ++ +
Sbjct: 294 FASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIK 353
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
P + M G A +E Y++++ V + + ++AC G+VE+ +
Sbjct: 354 PTIKHYGCMVDLL---GRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYGNVELGEKV 410
Query: 268 AKHVDEGCCDR-TNYVSNALIHMHSKCGYLDLAWREFSR 305
KH+ E D ++YV L +M++ G W E S+
Sbjct: 411 RKHLMELEPDHSSDYV--LLANMYASTG----QWNEMSK 443
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 136/309 (44%), Gaps = 28/309 (9%)
Query: 143 MAERNVISW---SAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEV 195
M+ +N W ++ + +C + K+ + R+ N + +I +
Sbjct: 1 MSPKNTTLWKTEQTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNM 60
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNG-YAKAAIEMYKVM----RQENVRISEVAMVG 250
A VFD+I +PD+ W M + + ++ AI +K M R +N S + +
Sbjct: 61 NYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHRPDNFTFSFILKII 120
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
A LG ++ L K E YV N+LIHM+ +++A + F + +
Sbjct: 121 ARLRFVNLGK-QLHCSLFKFGFEN----HTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPN 175
Query: 311 VISYSSMITAFADHGKSQEALDMFLKM---RNEGIE--PNQVTFIGVLTACSHGGLVEDG 365
++S++S+I GK EA+D+F KM ++ G+E P+ T + L+AC G ++ G
Sbjct: 176 LVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFG 235
Query: 366 CKQFELMTRVFGIKPLTEHLT---CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422
K + G+ E ++ +VD+ + G +E+A+ + K + +W ++
Sbjct: 236 RKVHSFVRD--GVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKR-KNVVSWNVMIL 292
Query: 423 ACKVHVNAE 431
H N E
Sbjct: 293 GFASHGNGE 301
>gi|297826975|ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327209|gb|EFH57629.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 239/440 (54%), Gaps = 22/440 (5%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ A ++FD++P+ T W ++I+ V +++ L+ +M V++
Sbjct: 156 IDKALELFDEMPERNT-VSWNTMIKALVQRGRIDEAMNLFERMPIKDVIS---------- 204
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A++ G K G +D+A+RLFD M ERN+ISW+AM+ GY + A + +
Sbjct: 205 --------WTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLF 256
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
M E++ +W MI G+ + E+ A +FD + + + W AM YV+N + A++
Sbjct: 257 QVMPERDFASWNTMITGFIRNREINRACGLFDRMPQKNVISWTAMITGYVENKENEEALK 316
Query: 232 MY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++ K++R V+ + V +SAC+ L + + + + + V++ALI+M+
Sbjct: 317 VFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQENEVVTSALINMY 376
Query: 291 SKCGYLDLAWREFSR--IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
SK G L A + F + +D+IS++SMI +A HG +EA++M+ +MR G +P++VT
Sbjct: 377 SKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYDQMRKHGFKPSEVT 436
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
++ +L ACSH GLVE G + F+ + R + EH TC+VDL GR+G+L+ + I
Sbjct: 437 YLNLLFACSHAGLVEKGMEFFKELVRDESLPLREEHYTCLVDLCGRAGRLKDVLNFINCD 496
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
+GA+L AC VH + + + +LE G + G +++NIYA+ GK + +
Sbjct: 497 DARLSRSFYGAILSACNVHSEVSIAKEVVKKVLETGSDDAGTYVMMSNIYAASGKREKAA 556
Query: 469 IVKMMISETEKKKSPGCSWI 488
++M + E KK PGCSW+
Sbjct: 557 EMRMKMKEKGLKKQPGCSWV 576
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 187/377 (49%), Gaps = 73/377 (19%)
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
RVP E +I K+G + +A++LFD + ER+V++W+ ++ GY GNM+ A+E +DR+
Sbjct: 45 RVPRP-EWLIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRV 103
Query: 175 -TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ KN VTW AM++GY + ++ A+ +F E+ E + W M Y Q+G A+E++
Sbjct: 104 DSRKNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELF 163
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVE-------------------MAAILAKH--VD 272
M + N V+ I A Q G ++ M LAK+ VD
Sbjct: 164 DEMPERNT----VSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVD 219
Query: 273 EG-----CCDRTNYVS-NALIHMHSKCGYLDLA--------------W----------RE 302
E C N +S NA+I ++ +D A W RE
Sbjct: 220 EARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNRE 279
Query: 303 -------FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLT 354
F R+ K+VIS+++MIT + ++ +++EAL +F KM +G ++PN T++ +L+
Sbjct: 280 INRACGLFDRMPQKNVISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILS 339
Query: 355 ACSH-GGLVEDGCKQFELMTRVFGIKPLTEHLT-CMVDLLGRSGQLEKAHSLIMDYKDFC 412
ACS GLVE G + +L+++ + E +T ++++ +SG+L A + D C
Sbjct: 340 ACSDLAGLVE-GQQIHQLISK--SVHQENEVVTSALINMYSKSGELIAARKMF-DNGLVC 395
Query: 413 --DAGTWGALLGACKVH 427
D +W +++ H
Sbjct: 396 QRDLISWNSMIAVYAHH 412
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 119/244 (48%), Gaps = 13/244 (5%)
Query: 130 IGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGY 189
+ L + + ++ S ++ V ++ G + A++ +D + E++ VTW +I GY
Sbjct: 28 VQLRNLVRSIYSSSSKPRVPRPEWLIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGY 87
Query: 190 GKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
K G +REA+++FD + S + W AM Y+++ A +++ M + N+ V+
Sbjct: 88 IKLGNMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNI----VSW 143
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
I Q G ++ A L + E R N +I + G +D A F R+
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPE----RNTVSWNTMIKALVQRGRIDEAMNLFERMPI 199
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
KDVIS+++M+ A +GK EA +F M E N +++ ++T ++ +++ +
Sbjct: 200 KDVISWTAMVDGLAKNGKVDEARRLFDCM----PERNIISWNAMITGYTYNNRIDEADQL 255
Query: 369 FELM 372
F++M
Sbjct: 256 FQVM 259
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 54/249 (21%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL-WTSLI 75
+Q+H + K++ H + LI + G+ L AR++FD C+ + W S+I
Sbjct: 351 QQIHQLISKSV---HQENEVVTSALINMYSKSGE-LIAARKMFDNGLVCQRDLISWNSMI 406
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR-------------------V 116
+ H H +++I +Y +M + G S T+ ++L AC+ +
Sbjct: 407 AVYAHHGHGKEAIEMYDQMRKHGFKPSEVTYLNLLFACSHAGLVEKGMEFFKELVRDESL 466
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE 176
P E C + L A RL D V + NC + + ++ FY
Sbjct: 467 PLREEHYTC---LVDLCGRAGRLKD-------------VLNFINCDDARLSRSFYG---- 506
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEP---DASCWAAMTVCYVQNGYAKAAIEMY 233
A+++ EV AK+V ++ E DA + M+ Y +G + A EM
Sbjct: 507 -------AILSACNVHSEVSIAKEVVKKVLETGSDDAGTYVMMSNIYAASGKREKAAEMR 559
Query: 234 KVMRQENVR 242
M+++ ++
Sbjct: 560 MKMKEKGLK 568
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 260/485 (53%), Gaps = 18/485 (3%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
+ S + +++ Q+H+ +L+ H +Y L R G + ++ +F Q
Sbjct: 33 FIDNSHSVDEVLQIHAAILRHNLLIHPRYPVLNLKLHRAYASHG-KIRHSLALFHQTIDP 91
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
FL+T+ I ++ Q+ LLY ++ + + FTFSS+L +C+
Sbjct: 92 DL-FLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCS----------- 139
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
TK G + L + ++ + +V YA G++ +A++ +DRM E++ V+ AM
Sbjct: 140 --TKSGKLIHTHVLKFGLGLDPYVA-TGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAM 196
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY-KVMRQENVRIS 244
I Y K G V A+ +FD + E D W M Y Q+G+ A+ ++ K++ +
Sbjct: 197 ITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPD 256
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
E+ +V A+SAC+Q+G +E + V+ V ALI M+SKCG L+ A F+
Sbjct: 257 EITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFN 316
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVE 363
KD++++++MIT +A HG SQ+AL +F +M+ G++P +TFIG L AC+H GLV
Sbjct: 317 DTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVN 376
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+G + FE M + +GIKP EH C+V LLGR+GQL++A+ +I + D+ W ++LG+
Sbjct: 377 EGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGS 436
Query: 424 CKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSP 483
CK+H LG+ A +L+ +G LL+NIYA +G ++ V+ ++ E K P
Sbjct: 437 CKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEP 496
Query: 484 GCSWI 488
G S I
Sbjct: 497 GISTI 501
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 252/534 (47%), Gaps = 67/534 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+ +H L +T+ P L+R+ G + ++VFD++ K W +I
Sbjct: 107 RLIHDRLRRTVKNPSGSIE---NCLLRMYCDCGSCID-VQKVFDEMLM-KNLVSWVIVIS 161
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------------- 121
+ + ++I L++ M G+ + + S+L +C PS LE
Sbjct: 162 AYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLG-PSFLELGKQIHSHVIRAQLN 220
Query: 122 ------AVICG-YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
IC Y + G ++ A+ +FD M +N ++W+ ++ GY ++ A E + RM
Sbjct: 221 ANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARM 280
Query: 175 T---------------------------------------EKNSVTWVAMIAGYGKCGEV 195
E ++ Y KCG++
Sbjct: 281 AMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDI 340
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A + F ISEP+ W+A+ + Q+G + I+++ +R E V ++ AC
Sbjct: 341 ESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQAC 400
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
++ M + + Y +A++ M+SKCG LD A R F I D ++++
Sbjct: 401 AAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWT 460
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
++I+ +A HG + EAL F +M++ G+ PN VTFI VLTACSH GLV + + M+R
Sbjct: 461 AIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRD 520
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
+G+KP +H CM+D R+G L++A LI DA +W +LLG C H + +LG+I
Sbjct: 521 YGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKI 580
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
AA +L L P T LL N+Y++ GKW+++ V+ +++E E KK CSWIS
Sbjct: 581 AAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWIS 634
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 137/303 (45%), Gaps = 12/303 (3%)
Query: 128 TKIGLMDDAQRLFDSMAERNV-ISWSAMVAGYANCGNMKA---AKEFYDRM--TEKNSVT 181
+K G + +A M + +V ++ + + CG +++ + +DR+ T KN
Sbjct: 63 SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSG 122
Query: 182 WV--AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+ ++ Y CG + +KVFDE+ + W + Y +NG + AI ++ M+
Sbjct: 123 SIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS 182
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+R + + + +C +E+ + HV + V A+ +M+ +CG+L+ A
Sbjct: 183 GIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGA 242
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F + ++ ++++ ++ + K + AL++F +M EG+E ++ F VL C
Sbjct: 243 KLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCC-- 300
Query: 360 GLVE-DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
GL + D +Q G + T +VD + G +E A+ + D +W
Sbjct: 301 GLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDV-SWS 359
Query: 419 ALL 421
AL+
Sbjct: 360 ALI 362
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 251/534 (47%), Gaps = 67/534 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+ +H L +T+ P L+R+ G + ++VFD++ K W +I
Sbjct: 107 RLIHDRLRRTVKNPSGSIE---NCLLRMYCDCGSXID-VQKVFDEMLM-KNLVSWVIVIS 161
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------------- 121
+ + ++I L++ M G+ + + S+L +C PS LE
Sbjct: 162 AYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLG-PSFLELGKQMHSHVIRAQLN 220
Query: 122 ------AVICG-YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
IC Y + G ++ A+ +FD M +N ++W+ ++ GY ++ A E + RM
Sbjct: 221 ANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARM 280
Query: 175 T---------------------------------------EKNSVTWVAMIAGYGKCGEV 195
E ++ Y KCG++
Sbjct: 281 AMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDI 340
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
A + F ISEP+ W+A+ + Q+G + I+++ +R E V ++ AC
Sbjct: 341 ESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQAC 400
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
++ M + + Y +A++ M+SKCG LD A R F I D ++++
Sbjct: 401 AAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWT 460
Query: 316 SMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV 375
++I+ +A HG + EAL F +M++ G+ PN VTFI VLTACSH GLV + + M+R
Sbjct: 461 AIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRD 520
Query: 376 FGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEI 435
+G+KP +H CM+D R+G L +A LI DA +W +LLG C H + +LG+I
Sbjct: 521 YGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKI 580
Query: 436 AARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
AA +L L P T LL N+Y++ GKW+++ V+ +++E E KK CSWIS
Sbjct: 581 AAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWIS 634
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 136/304 (44%), Gaps = 14/304 (4%)
Query: 128 TKIGLMDDAQRLFDSMAERNV-ISWSAMVAGYANCGNMKA---AKEFYDRM--TEKNSVT 181
+K G + +A M + +V ++ + + CG +++ + +DR+ T KN
Sbjct: 63 SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSG 122
Query: 182 WV--AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
+ ++ Y CG + +KVFDE+ + W + Y +NG + AI ++ M+
Sbjct: 123 SIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS 182
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
+R + + + +C +E+ + HV + V A+ +M+ +CG+L+ A
Sbjct: 183 GIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGA 242
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F + ++ ++++ ++ + K + AL++F +M EG+E ++ F VL C
Sbjct: 243 KLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCC-- 300
Query: 360 GLVEDG--CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
+ED KQ G + T +VD + G +E A+ + D +W
Sbjct: 301 -XLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDV-SW 358
Query: 418 GALL 421
AL+
Sbjct: 359 SALI 362
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 215/389 (55%), Gaps = 6/389 (1%)
Query: 100 LTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYA 159
L SGF + + A V + T G + A+ FD R+V + M+A Y
Sbjct: 74 LRSGFAAADLFVRTALVE------MYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYV 127
Query: 160 NCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVC 219
G + A++ +D M+ ++ V+W MI GY G+V A+++FD + DA W++M
Sbjct: 128 ARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISA 187
Query: 220 YVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT 279
Y + +K A+E+++ MR V ++MV +SAC+ +G + + A + + V+ +
Sbjct: 188 YAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVD 247
Query: 280 NYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
+ AL+ M++KCG ++ + + F + KDV+++SSMI A+HG +AL +F +M +
Sbjct: 248 MKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMIS 307
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
+G++PN++TFIGVL AC+H GLV DG K F M+ V G+ P EH CMVDLLGR+G +E
Sbjct: 308 QGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVE 367
Query: 400 KAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYA 459
+A LI D W LLGAC++H N E+ E A L L P G+ LL+NIYA
Sbjct: 368 EAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYA 427
Query: 460 SMGKWKDSEIVKMMISETEKKKSPGCSWI 488
W+ ++ I ++ PG S I
Sbjct: 428 QANSWEGVAEMRKTIRRENIQRVPGRSSI 456
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 137/324 (42%), Gaps = 35/324 (10%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ AR++FD + + F W+S+I + ++++ L+ +M GV + SVL
Sbjct: 162 DVGMAREIFDGT-RDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVL 220
Query: 111 NAC---------ARVPSLLE------------AVICGYTKIGLMDDAQRLFDSMAERNVI 149
+AC A V +E A++ Y K G ++++ ++F +M ++V+
Sbjct: 221 SACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVL 280
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+WS+M+ G AN G A + M + N +T++ ++ G V + KK F +
Sbjct: 281 TWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSM 340
Query: 206 SE-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
S+ P + M + G+ + A+E+ + M + I ++GA +
Sbjct: 341 SDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEI 400
Query: 261 VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDL---AWRE-FSRIKNKDVISYSS 316
E A K +D +SN +S G ++ RE R+ + I + +
Sbjct: 401 AEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWEN 460
Query: 317 MITAFADHGKSQEALDMFLKMRNE 340
+ F +S ++ KM E
Sbjct: 461 TVHEFVSGDRSHPRIEEIYKMLEE 484
>gi|357126462|ref|XP_003564906.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 582
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/476 (32%), Positives = 232/476 (48%), Gaps = 52/476 (10%)
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA----RVPS 118
P + F W +LIR H A R ++ +A M R V +TF +VL ACA +P
Sbjct: 73 PASRDAFPWNTLIRLHA-PASPRNALAYFACMRRAAVEPDAYTFPAVLKACACGVLGLPV 131
Query: 119 LLEAVICG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
EAV G Y +IG +++FD A R+++SW++MVAGY CG +
Sbjct: 132 HAEAVRTGMDGDLFTRNALVSFYCRIGDCRSGRKVFDHGA-RDLVSWNSMVAGYVACGEL 190
Query: 165 KAAKEFYDRMTEKNSVTWVAMIAGYGK-CGEVREAKKVFDEISEPDASCWAAMTVCY--- 220
+ A+E +D M +++ +W MI YGK G V A+++FDE D CW +M Y
Sbjct: 191 ELAQELFDGMPLRDAFSWATMIDAYGKRSGGVDRARELFDETPNRDLVCWCSMIDGYARQ 250
Query: 221 -----------------------VQNGYAKA-----AIEMYKVMRQENVRISEVAMVGAI 252
V +GY + A+E+++ M + ++ VA VGA
Sbjct: 251 GRMDEARALFEEMPERNVISWSIVVDGYVRCGEPSEALELFQRMLRCGIKPDRVAAVGAF 310
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
+AC QLG +E L ++++ V ALI M+ KCG LDL F + +K V+
Sbjct: 311 TACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYMKCGRLDLGKLIFESMPDKSVV 370
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
+++ MI H A+ +F +M EG + ++ + VLTAC+H GL+ +G F M
Sbjct: 371 TWNVMIIGLGTHSCGLHAVKLFYQMEAEGAPIDDLSVLAVLTACTHAGLISEGLGIFHRM 430
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
+ FG+ P EH +VDLLGR+G L+ A I WG+LL AC+ H EL
Sbjct: 431 RKDFGMDPKVEHYGALVDLLGRAGHLDHARHAIETMPMEPTPELWGSLLAACRSHRCVEL 490
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E++ L LG + G LL+NIYA G W ++ ++S KK G S I
Sbjct: 491 AELSVERLASLGADDFGVYVLLSNIYADEGMWDGVFRIRRLMSAEGMKKDIGRSVI 546
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 240/463 (51%), Gaps = 39/463 (8%)
Query: 32 DQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILL 90
D + + +I LL GD L AR++FD+ C + W S+I +V +++
Sbjct: 111 DSDIFVSNAVIHLLVSCGD-LDGARKMFDK--SCVRDLVSWNSMINGYVRRGWAYEALNF 167
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
Y +M G+ T V+++CA++ L D R E N +
Sbjct: 168 YREMKVEGIKPDEVTMIGVVSSCAQLEDL---------------DLGRESHCYIEENGLK 212
Query: 151 WSAMVAG-----YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+ +A Y CGN+++A++ +D MT K V+W M+ FDE+
Sbjct: 213 LTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTML---------------FDEM 257
Query: 206 SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
+ D W AM YV K A+ ++ M+ N+ EV MV +SAC+QLG +++
Sbjct: 258 PDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGI 317
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
+ ++++ + ALI M++KCG + A + F + ++ ++++++I+ A HG
Sbjct: 318 WIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHG 377
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
+ A+ F +M + + P++VTF+G+L+AC HGGLVE+G K F M+ F + P +H
Sbjct: 378 NAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHY 437
Query: 386 TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGP 445
+CMVDLLGR+G LE+A LI DA WGAL AC++H N +GE AA LL++ P
Sbjct: 438 SCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDP 497
Query: 446 EKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+G LLAN+Y WK++ + ++ + +K+PGCS I
Sbjct: 498 HDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSI 540
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYK-VMRQENVRISEVAMVGAISACTQLGDVEMAAI 266
P+ W ++ + + A+ +YK V++ + + AC +L + M +
Sbjct: 41 PNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSE 100
Query: 267 LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
+ HV D +VSNA+IH+ CG LD A + F + +D++S++SMI + G
Sbjct: 101 ILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW 160
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
+ EAL+ + +M+ EGI+P++VT IGV+++C+ ++ G ++ G+K
Sbjct: 161 AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLG-RESHCYIEENGLKLTVPLAN 219
Query: 387 CMVDLLGRSGQLEKAHSL---------------IMDYKDFCDAGTWGALLGACKVHVN 429
++D+ + G LE A L + D D W A++G VH N
Sbjct: 220 ALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGG-YVHAN 276
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 246/494 (49%), Gaps = 63/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +VFD++P+ + W +++ + ++ L +M GV T SSVL C
Sbjct: 121 AYRVFDEMPE-RDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCV 179
Query: 115 ----RVPSLL------------EAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSA 153
R +L+ E +C Y K+G++ +A +F MA R++++W++
Sbjct: 180 VLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNS 239
Query: 154 MVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGE--------------- 194
+++ G + AA E + M E + +T V++ + +CG+
Sbjct: 240 IISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRG 299
Query: 195 ---------------------VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
+ A+KVFD + + D W + Y+QNG A AI +Y
Sbjct: 300 WDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIY 359
Query: 234 KVMR-QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
M E ++ + V + A + LG ++ + + + YV+ LI +++K
Sbjct: 360 NDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAK 419
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG L A F + + ++++I HG +AL +F +M+ E I+P+ VTF+ +
Sbjct: 420 CGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSL 479
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L ACSH GLV+ G F+LM V+GI P+ +H TCMVD+LGR+GQL++A I
Sbjct: 480 LAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKP 539
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
D+ WGALLGAC++H N E+G++A+++L EL PE G L++N+YA +GKW + V+
Sbjct: 540 DSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRS 599
Query: 473 MISETEKKKSPGCS 486
++ +K+PG S
Sbjct: 600 LVRRQNLQKTPGWS 613
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 175/376 (46%), Gaps = 54/376 (14%)
Query: 102 SGFTFSSVLNACARVPSLLE-------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
G ++ L+ACA LL +++ Y + G + +A R+FD M ER+V +W+AM
Sbjct: 80 PGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAM 139
Query: 155 VAGYANCGNMKAAK--EFYDRMTEK----NSVTWV------------------------- 183
++G C N +AA RM + ++VT
Sbjct: 140 LSGL--CRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKH 197
Query: 184 ----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A+I YGK G + EA VF ++ D W ++ Q G AA+E++
Sbjct: 198 GLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELF 257
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSK 292
M + V + +V SA Q GD A + +V D + ++ NA++ M++K
Sbjct: 258 HGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAK 317
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRN-EGIEPNQVTFIG 351
+D A + F + ++DV+S++++IT + +G + EA+ ++ M N EG++P Q TF+
Sbjct: 318 MSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVS 377
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
VL A S+ G ++ G + L + G+ TC++DL + G+L +A + ++
Sbjct: 378 VLPAYSYLGGLQQGMRMHALSIKT-GLNLDVYVTTCLIDLYAKCGKLVEA-MFLFEHMPR 435
Query: 412 CDAGTWGALLGACKVH 427
G W A++ VH
Sbjct: 436 RSTGPWNAIIAGLGVH 451
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+ S +L+H + + G + A+R F + +DV ++++M++ + ++ +A+ + +M E
Sbjct: 103 FASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGE 162
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIK-PLTEHL---TCMVDLLGRSG 396
G+ + VT VL C V G + L+ V+ +K L+ L ++D+ G+ G
Sbjct: 163 GVAGDAVTLSSVLPMC-----VVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLG 217
Query: 397 QLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAELGEIAA 437
L +AH + M +D TW +++ A N + G++AA
Sbjct: 218 MLTEAHWVFGGMALRDLV---TWNSIISA-----NEQGGKVAA 252
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 241/483 (49%), Gaps = 44/483 (9%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFT 105
+ G A ++FD++ C + W S+I +V + + + +Y +M LG+ T
Sbjct: 196 IEGKRPESASELFDKL--CDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLAT 253
Query: 106 FSSVLNACA---------------------RVPSLLEAVICGYTKIGLMDDAQRLFDSMA 144
SVL CA R + ++ Y+K G +D A R+F+ M
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 145 ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKK 200
ERNV+SW++M+AGY G A +M ++ + V +++ + G + K
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKD 373
Query: 201 VFDEIS----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI---- 252
V D I E + A+ Y + G A ++ M +++ IS M+G +
Sbjct: 374 VHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDI-ISWNTMIGELKPDS 432
Query: 253 -------SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
AC L +E + ++ +V+NAL+ ++ KCG L LA F
Sbjct: 433 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
I +KD++S++ MI+ + HG EA+ F +MR+ GIEP++V+FI +L ACSH GL+E G
Sbjct: 493 IPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F +M F I+P EH CMVDLL R+G L KA+ I DA WGALL C+
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCR 612
Query: 426 VHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGC 485
++ + EL E A + EL PE TG LLANIYA KW++ + ++ I + +K+PGC
Sbjct: 613 IYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGC 672
Query: 486 SWI 488
SWI
Sbjct: 673 SWI 675
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 172/385 (44%), Gaps = 49/385 (12%)
Query: 105 TFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNV----ISWSAMVAGYAN 160
T+SSVL CA SL D +++ + NV + +V+ YA
Sbjct: 101 TYSSVLQLCAGSKSL--------------TDGKKVHSIIKSNNVAVDEVLGLKLVSLYAT 146
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVRE--------------------AKK 200
CG++K + +D M +KN W M++ Y K G+ +E A +
Sbjct: 147 CGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASE 206
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
+FD++ + D W +M YV NG + +E+YK M + + ++ + C G
Sbjct: 207 LFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGT 266
Query: 261 VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
+ + + + +R SN L+ M+SKCG LD A R F ++ ++V+S++SMI
Sbjct: 267 LSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAG 326
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
+ G+S A+ + +M EG++ + V +L AC+ G +++G K + ++
Sbjct: 327 YTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNG-KDVHDYIKANNMES 385
Query: 381 LTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVNAE---LGEI 435
++D+ + G ++ A+S+ M KD +W ++G K L
Sbjct: 386 NLFVCNALMDMYTKCGSMDGANSVFSTMVVKDII---SWNTMIGELKPDSRTMACILPAC 442
Query: 436 AARHLLELGPEKTGNSALLANIYAS 460
A+ LE G E G +L N Y+S
Sbjct: 443 ASLSALERGKEIHG--YILRNGYSS 465
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/543 (28%), Positives = 265/543 (48%), Gaps = 69/543 (12%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ 68
++ +F Q HS+ +K+ D + L+ L G NL AR+VFD + K
Sbjct: 72 KAVSFTHGIQFHSHAIKS---GLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFY-KDL 127
Query: 69 FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL-------- 120
WTS+I +V ++S+ L+ +M LG+ +GFT S+V+ AC+ + L
Sbjct: 128 ISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGV 187
Query: 121 -------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY--------- 158
A+I Y + +DDA +F + + + I W+++++ +
Sbjct: 188 VMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKA 247
Query: 159 ---------------------------ANCGNMKAAKEFYDRMTEK----NSVTWVAMIA 187
N G +K KE + ++ N +++
Sbjct: 248 LGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVD 307
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
YGKC V +++ VFD +S + W A+ Y QNG ++ I +++ E ++ +
Sbjct: 308 MYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFR----EGKKVDTYS 363
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ AC L V + + CC R +AL+ +++KCG +D A+R F R+
Sbjct: 364 FGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMS 423
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+++I+++SMI FA +G+ E +F +M EGI P+ ++F+GVL ACSH GLV+ G K
Sbjct: 424 VRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKK 483
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F MT V+ IKP EH CM+DLLGR+G LE+A +LI + + W LLGAC
Sbjct: 484 YFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAAS 543
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
++ E A+ +EL P+ + LAN+Y ++G+W D+ ++ ++++ K PG SW
Sbjct: 544 PHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGTSW 603
Query: 488 ISS 490
I +
Sbjct: 604 IET 606
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 191/435 (43%), Gaps = 48/435 (11%)
Query: 4 KYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIP 63
K L+ + ++ L ++ LKTL P + + Q+ +L A V + I
Sbjct: 2 KLLLSSQRHYSTLASLN---LKTLENPQSKAYKIIQYC------KSGSLFEAIHVLNSID 52
Query: 64 KCKTQ---FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV-PSL 119
+ F + SL++ F I ++ + G+ T F +S+L ++ P+L
Sbjct: 53 WTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNL 112
Query: 120 LEA-----------------VICGYTKIGLMDDAQRLFDSM----AERNVISWSAMVAGY 158
EA +I GY K+ + LF M E N + SA++
Sbjct: 113 FEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKAC 172
Query: 159 ANCGNMKAAKEFYD----RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
+ G+++ K F+ R + N V A+I YG+ V +A VF E+ +PDA CW
Sbjct: 173 SGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWT 232
Query: 215 AMTVCYVQNG-YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA-ILAKHVD 272
++ + +N Y KA Y + R+ + ++AC LG ++ + AK +
Sbjct: 233 SIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVIT 292
Query: 273 EGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALD 332
G +V ++L+ M+ KC ++ + F R+ K+++S+++++ + +G + +
Sbjct: 293 SGLSGNV-FVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIR 351
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK-QFELMTRVFGIKPLTEHLTCMVDL 391
+F EG + + +F VL AC+ V G + + + R +TE + +VDL
Sbjct: 352 IF----REGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTE--SALVDL 405
Query: 392 LGRSGQLEKAHSLIM 406
+ G ++ A+ + +
Sbjct: 406 YAKCGCIDFAYRIFV 420
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG-YLDLAWREFSRIKNKD 310
+ CT+ H + D +V N+L+ ++ K G L A R F + KD
Sbjct: 67 LQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKD 126
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG-CKQF 369
+IS++SMIT + K +++L++FL+M GIEPN T V+ ACS G + G C
Sbjct: 127 LISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHG 186
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+M R F + + T ++D+ GR+ ++ A + ++ DA W +++ A
Sbjct: 187 VVMVRGFDLNDVIS--TALIDMYGRNSAVDDAILVFVELPQ-PDAICWTSIISA 237
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 256/482 (53%), Gaps = 22/482 (4%)
Query: 12 TFNQLKQVHSYLLKT-LTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
+ L+++H+ L+KT L K A ++ P +++YA VF QI + F+
Sbjct: 8 SMKDLQKIHAQLIKTGLAKDT----IAASRVLAFCTSPAGDINYAYLVFTQI-RNPNLFV 62
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKI 130
W ++IR + +I L+ M FT + PS+ +A Y ++
Sbjct: 63 WNTIIRGFSQSSTPHNAISLFIDMM--------FTSPTTQPQRLTYPSVFKA----YAQL 110
Query: 131 GLMDDAQRLFDSMA----ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
GL + +L + E + + ++ Y NCG + A+ +D T + VTW MI
Sbjct: 111 GLAHEGAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMI 170
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
G KCGE+ +++++FD++ + W +M YV+ G A+E++ M++E ++ SE
Sbjct: 171 IGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEF 230
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
MV ++AC LG + + ++ + + V A+I M+SKCG +D A + F
Sbjct: 231 TMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSA 290
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
K + ++S+I A G+ EA+ +F K+ + ++P+ V+FIGVLTAC+H G+V+
Sbjct: 291 PKKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAK 350
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKV 426
F LM+ + I+P +H +CMVD+LGR+G LE+A LI DA WG+LL +C+
Sbjct: 351 DYFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCRE 410
Query: 427 HVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
+ N E+ + AA+ + EL P ++ + LL+N+YA+ ++++ ++ + E + K PGCS
Sbjct: 411 YGNIEMAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCS 470
Query: 487 WI 488
I
Sbjct: 471 LI 472
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 211/402 (52%), Gaps = 40/402 (9%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY----DRMTEKNSVTW 182
Y GL+ A+RLFD M +RNV W+ ++ YA G + A + Y D E ++ T+
Sbjct: 107 YAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTY 166
Query: 183 -----------------------------------VAMIAGYGKCGEVREAKKVFDEISE 207
++ Y KCG V +A+ VFD I
Sbjct: 167 PLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRV 226
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
D+ W +M Y QNG A+ + + M V + +V ISA + L
Sbjct: 227 RDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGREL 286
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
DR + + +L+ M++K G++ +A F ++ ++++S+++MI + HG
Sbjct: 287 HGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHF 346
Query: 328 QEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLT 386
EAL +F KMR E + P+ +TF+GVL+AC+HGG+V++ + F LM V+ IKP +H T
Sbjct: 347 DEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFT 406
Query: 387 CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
C+VD+LG +G+ E+A+ LI D+G WGALL CK+H N ELGE+A + L+EL PE
Sbjct: 407 CLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPE 466
Query: 447 KTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
GN LL+NIYA GKW+ + V+ +++ KK GCSWI
Sbjct: 467 DAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWI 508
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 128/286 (44%), Gaps = 44/286 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VFD+I + + +W S+I + + +++ L M GV + T S ++A A
Sbjct: 217 ARAVFDRI-RVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAA 275
Query: 115 ---------------------RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
R L +++ Y K G + A+ LF+ + +R ++SW+A
Sbjct: 276 DAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNA 335
Query: 154 MVAGYANCGNMKAAKEFYDRM-----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE- 207
M+ GY G+ A + +++M +++T+V +++ G V+EAK+ F + +
Sbjct: 336 MICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDV 395
Query: 208 ----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQLGDVE 262
P + + G + A ++ K M + + + GA ++ C +VE
Sbjct: 396 YSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQ----PDSGIWGALLNGCKIHKNVE 451
Query: 263 MAAI-LAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ + L K ++ D NYV L +++++ G W + +R++
Sbjct: 452 LGELALQKLIELEPEDAGNYV--LLSNIYAQSG----KWEKAARVR 491
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
++ L+ +++ CG + A R F + ++V ++ +I A+A G + A+ ++ M + G
Sbjct: 99 LATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYG 158
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC--MVDLLGRSGQLE 399
+EP+ T+ L AC+ +E G E+ RV G + C +VD+ + G ++
Sbjct: 159 VEPDNFTYPLALKACAALLDLETG---REVHERVLGTHWGEDMFVCAGLVDMYAKCGCVD 215
Query: 400 KAHSLIMDYKDFCDAGTWGALLGA 423
A + + D D+ W +++ A
Sbjct: 216 DARA-VFDRIRVRDSVVWNSMIAA 238
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 247/448 (55%), Gaps = 15/448 (3%)
Query: 45 LQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSG 103
L + A F+++P + W S+I + + +++ +++KM + +
Sbjct: 217 LYMQSGQFELAASQFEKMPD-RDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDN 275
Query: 104 FTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
FT +S+L+ACA + L IG A + + E + +A+++ YA G
Sbjct: 276 FTLASILSACANLEKL---------NIGKQIHAY-ILRAETETSGAVGNALISMYAKSGG 325
Query: 164 MKAAKEF--YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
++ A+ ++R + N + + +++ GY K G V+ A+++F+++ + D W AM V YV
Sbjct: 326 VEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYV 385
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
QNG A+E++++M E + + +S + L +E + + T
Sbjct: 386 QNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
V+NALI M++K G +++A R F K+++S++SMI A A HG +EA+++F +M +
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
G++P+ +T++GVL+AC+H GLVE G K + +MT V I+P H CM+DL GR+G L++
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
A+ I D WG+LL +CK+H NA+L ++AA LL + P +G LAN+Y++
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
GKW+++ + ++ + +K G SWI
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWI 653
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 168/353 (47%), Gaps = 53/353 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N +R++ ++P C WT++I + F +I ++AKM V S FT S+VL
Sbjct: 91 NFEVSRRLLYEMPDCDP-VSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVL 149
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS----WSAMVAGYANCGNMKA 166
++CA +L D +++ + + + S ++++ YA CG+
Sbjct: 150 SSCAANQTL--------------DIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVI 195
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
AK +DRMT KN TW A+I+ Y + G+ A F+++ + D W +M Y Q GY
Sbjct: 196 AKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYN 255
Query: 227 KAAIEMY-KVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
A+ ++ K++ + +++ + +SAC L + + + ++ + + V NA
Sbjct: 256 LEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNA 315
Query: 286 LIHMHSKCGYLDLAW--------------------------------RE-FSRIKNKDVI 312
LI M++K G +++A RE F++++++DV+
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV 375
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
++++MI + +G +AL++F M NEG EPN T +L+ S ++E G
Sbjct: 376 AWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHG 428
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 46/292 (15%)
Query: 101 TSGFTFSSVLNACARV--PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
TS F+ +L R+ P +V C K GL V + ++ Y
Sbjct: 8 TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGL------------HLGVYLMNNLMTFY 55
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTV 218
A G+++ A +D M K++ +W +I+GY K G ++++ E+ + D W A+ V
Sbjct: 56 AKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIV 115
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMA-------------- 264
Y Q G AI M+ M E V S+ + +S+C +++
Sbjct: 116 GYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGS 175
Query: 265 -----------------AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++AK V + + NALI ++ + G +LA +F ++
Sbjct: 176 CVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMP 235
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNE-GIEPNQVTFIGVLTACSH 358
++D++S++SMI+ ++ G + EAL +F KM NE ++P+ T +L+AC++
Sbjct: 236 DRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACAN 287
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 271/540 (50%), Gaps = 77/540 (14%)
Query: 17 KQVHSYLLKTLTKPHDQYHY------YAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
+ H+ +LKTL P + Y YA+ D+L+ A+ + + P C++
Sbjct: 26 RAAHAQILKTLKTPFPAFLYNHLVNMYAKL---------DHLNSAKLILELAP-CRSVVT 75
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL---------------NACAR 115
WT+LI V + F ++L ++ M V + FTF VL +A A
Sbjct: 76 WTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAV 135
Query: 116 VPSLLEAVICG------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG----NMK 165
L+ V G Y+K+G ++DA ++FD M RN+ +W+A ++ G ++
Sbjct: 136 KEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVI 195
Query: 166 AAKEFYDRMTEKNSVTWV-----------------------------------AMIAGYG 190
A E + +S+T+ +I YG
Sbjct: 196 AFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYG 255
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
KCGEV ++ VFD + E ++ W+++ YVQN + A ++ R+E++ ++ +
Sbjct: 256 KCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSS 315
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+ AC L ++E + + C ++ +V++AL+ M+ KCG +D A + F+ + ++
Sbjct: 316 VLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERN 375
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
++S+++++ +A G + +A+ + +M + GI P+ V+ I L+ACS G ++ G K F
Sbjct: 376 LVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIF 435
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
E M +G++P EH C+VDLLGR+G +E A+ I WGALLGAC++H
Sbjct: 436 ESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGK 495
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
ELG++AA L EL P+ +GN +L+N++A+ G+W++ +V+ + E KK G SWI+
Sbjct: 496 PELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWIT 555
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 148/335 (44%), Gaps = 60/335 (17%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
+ VFD++ + + W+SLI +V + ++ L+ + + + + F SSVL ACA
Sbjct: 263 SEMVFDRMGE-RNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACA 321
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ + A++ Y K G +D+A++ F++M ERN++SW+A
Sbjct: 322 GLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNA 381
Query: 154 MVAGYANCGNMKAAKEFYDRMTEKNSV--TWVAMIAGYGKC---GEVREAKKVFDEIS-- 206
++ GYA+ G+ A + MT + ++V++I C G+++ K+F+ +
Sbjct: 382 LLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKER 441
Query: 207 ---EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQLGDVE 262
EP +A + + G + A + K M +++ GA + AC G E
Sbjct: 442 YGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFP----PTISIWGALLGACRMHGKPE 497
Query: 263 MAAILAKHVDE-GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN--KDV-------- 311
+ + A+ + E D N+V L +M + G W E + ++N K+V
Sbjct: 498 LGKLAAEKLFELDPKDSGNHV--VLSNMFAATGR----WEEVTVVRNEMKEVGIKKGAGF 551
Query: 312 --ISYSSMITAF----ADHGKSQEALDMFLKMRNE 340
I+ S I F H K E D+ K+R E
Sbjct: 552 SWITVDSRIHMFQAKDKSHEKDPEIQDILGKLRKE 586
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 249/516 (48%), Gaps = 65/516 (12%)
Query: 37 YAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR 96
Y Q + + + + AR VFD + K + W ++I + + + +++++ M
Sbjct: 153 YVQNALLAMYMNFGRVEMARNVFD-VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN 211
Query: 97 LGVLTSGFTFSSVLNACARVPSL---------------------LEAVICGYTKIGLMDD 135
GV T S+L C + L A++ Y K G MD+
Sbjct: 212 EGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVT---------- 181
A+ +F M R+VI+W+ M+ GY G+++ A E M N+VT
Sbjct: 272 ARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGD 331
Query: 182 ------------W-------------VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
W ++I+ Y KC + +VF S W+A+
Sbjct: 332 ALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAI 391
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCC 276
VQN + A++++K MR+E+V + + + A L D+ + ++ +
Sbjct: 392 IAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGF 451
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRI----KNKDVISYSSMITAFADHGKSQEALD 332
+ + L+H++SKCG L+ A + F+ I K+KDV+ + ++I+ + HG AL
Sbjct: 452 MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQ 511
Query: 333 MFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLL 392
+F++M G+ PN++TF L ACSH GLVE+G F M + + H TC+VDLL
Sbjct: 512 VFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLL 571
Query: 393 GRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSA 452
GR+G+L++A++LI + WGALL AC H N +LGE+AA L EL PE TGN
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYV 631
Query: 453 LLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LLANIYA++G+WKD E V+ M+ +K PG S I
Sbjct: 632 LLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTI 667
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 192/443 (43%), Gaps = 69/443 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGV--LTSGFTFSS 108
+++YAR++FD++P+ + + +IR +V + +I ++ +M G+ + G+T+
Sbjct: 64 HIAYARKLFDEMPQ-SSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPF 122
Query: 109 VLNACARVPSL-LEAVICG--------------------YTKIGLMDDAQRLFDSMAERN 147
V A + S+ L VI G Y G ++ A+ +FD M R+
Sbjct: 123 VAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRD 182
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAM------------------ 185
VISW+ M++GY G M A +D M + + T V+M
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHK 242
Query: 186 -----------------IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+ Y KCG + EA+ VF + D W M Y+++G +
Sbjct: 243 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVEN 302
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL-AKHVDEGCCDRTNYVSNALI 287
A+E+ ++M+ E VR + V + +SAC + L + + C + +LI
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDI-IIETSLI 361
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M++KC ++DL +R FS +S++I + ++ALD+F +MR E +EPN
Sbjct: 362 SMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIA 421
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--- 404
T +L A + + +T+ G + T +V + + G LE AH +
Sbjct: 422 TLNSLLPAYATLADLRQTMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480
Query: 405 IMDYKDFCDAGTWGALLGACKVH 427
I + D WGAL+ +H
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMH 503
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 114/238 (47%), Gaps = 6/238 (2%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y CG + A+K+FDE+ + + + YV++G AI ++ M E ++
Sbjct: 59 YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGY 118
Query: 249 VGAI--SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
A +L + + ++ + YV NAL+ M+ G +++A F +
Sbjct: 119 TYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVM 178
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
KN+DVIS+++MI+ + +G +AL MF M NEG++P+ T + +L C H +E G
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGR 238
Query: 367 KQFELM-TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+L+ + G K E +V++ + G++++A + + D TW ++
Sbjct: 239 NVHKLVEEKRLGDK--IEVKNALVNMYLKCGRMDEAR-FVFGRMERRDVITWTCMING 293
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 94/258 (36%), Gaps = 76/258 (29%)
Query: 2 TSKYLVPRSKTFNQLKQ---VHSYLLKT-----LTKPHDQYHYYAQFLIRLLQLPGDNLS 53
T L+P T L+Q +H YL KT L H Y++ L
Sbjct: 422 TLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKC---------GTLE 472
Query: 54 YARQVFDQIP---KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
A ++F+ I K K LW +LI + +H ++ ++ +M R GV + TF+S L
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSAL 532
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
NAC+ GL+++ LF M E
Sbjct: 533 NACSHS--------------GLVEEGLTLFSFMLEH------------------------ 554
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASCWAAMTVCYVQNGYAKAA 229
Y + N T + + G+ G + EA + I EP ++ W A+ V
Sbjct: 555 YKTLARSNHYTCIVDL--LGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVT------- 605
Query: 230 IEMYKVMRQENVRISEVA 247
ENV++ E+A
Sbjct: 606 --------HENVQLGEMA 615
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 238/493 (48%), Gaps = 61/493 (12%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
VF I K +W++LI +SI L+ M L + +T S+L+A
Sbjct: 371 VFKTIKKPDI-VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG 429
Query: 118 SLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
+L A++ Y K G + D +L++SM +R++ISW+A ++
Sbjct: 430 NLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLS 489
Query: 157 GYANCGNMKAAKEFYDRMTEK--------------------------------------- 177
G +CG + M E+
Sbjct: 490 GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD 549
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
N+ A+I Y KC + +A F+ +S D W + Y Q + A+ ++ M+
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
QE V+ +E + G +S C+ L +E L V + +V +AL+ M++KCG ++
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A F + +D I+++++I +A +G+ +AL F M +EGI P+ VTF G+L+ACS
Sbjct: 670 EAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACS 729
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
H GLVE+G + F M R FGI P +H CMVD+LGR G+ ++ I + +A W
Sbjct: 730 HQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIW 789
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
+LGA K+H N LGE AA L EL PE+ + LL+NI+A+ G+W D + V+ ++S
Sbjct: 790 ETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSK 849
Query: 478 EKKKSPGCSWISS 490
KK PGCSW+ +
Sbjct: 850 GVKKEPGCSWVEA 862
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 61/365 (16%)
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA 112
+YAR V ++P + WT+LI+ V SI L+ +M G++ + FT ++ L A
Sbjct: 164 AYARLVLAKMPD-RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKA 222
Query: 113 CA----------------RVPSLLE-----AVICGYTKIGLMDDAQRLFDSMAERNVISW 151
C+ ++ LL+ A++ Y K G ++ A ++F M E+N ++W
Sbjct: 223 CSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTW 282
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG------------------- 188
+ ++ GYA G++ + + M E N T ++ G
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIK 342
Query: 189 ----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
Y KCG +A VF I +PD W+A+ C Q G ++ +I++
Sbjct: 343 CGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKL 402
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ +MR + ++ + +SA T G+++ + V + + VSNAL+ M+ K
Sbjct: 403 FHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK 462
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
G + + + + ++D+IS+++ ++ D G L +F M EG PN TFI +
Sbjct: 463 NGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISI 522
Query: 353 LTACS 357
L +CS
Sbjct: 523 LGSCS 527
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 122/268 (45%), Gaps = 5/268 (1%)
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
+S WV+++ Y KC A+ V ++ + D W A+ V G+A +I +++ M+
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ 205
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
E + +E + + AC+ +++ + + +V +AL+ +++KCG ++
Sbjct: 206 NEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIE 265
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
LA + F + ++ ++++ ++ +A G L +F M ++ N+ T VL C+
Sbjct: 266 LASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCA 325
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTC-MVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
+ ++ G L+ + G + E + C +VD+ + G A + K D
Sbjct: 326 NSKNLKQGQVIHSLIIKC-GYEG-NEFIGCGLVDMYSKCGLAIDAIGVFKTIKK-PDIVV 382
Query: 417 WGALLGACKVHVNAELGEIAARHLLELG 444
W AL+ +E I HL+ LG
Sbjct: 383 WSALITCLDQQGQSE-ESIKLFHLMRLG 409
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 243/504 (48%), Gaps = 68/504 (13%)
Query: 48 PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH--RLGVLTSGFT 105
P D AR+VFD++P + + W +++ + + ++ +M G T
Sbjct: 67 PAD----ARRVFDRMPS-RDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVT 121
Query: 106 FSSVLNACARVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMA 144
SVL ACA +L AV+ Y K G ++ A+ +FD M
Sbjct: 122 LVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMP 181
Query: 145 ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK--------------------------- 177
RN +SW+AM+ GYA+ GN A + RM ++
Sbjct: 182 VRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRR 241
Query: 178 ------------NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS-CWAAMTVCYVQNG 224
N A+I Y KC A +VF+E+ W AM + + QN
Sbjct: 242 VHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNE 301
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN 284
+ A ++ M+ ENVR +V I A + D A + + D+ YV
Sbjct: 302 CPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLT 361
Query: 285 ALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEP 344
ALI M+SKCG + +A R F +++ VI++++MI + HG Q A+++F +M+ G P
Sbjct: 362 ALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLP 421
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
N+ TF+ VL ACSH GLV++G K F M + +G++P EH MVDLLGR+G+L++A S
Sbjct: 422 NETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSF 481
Query: 405 IMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKW 464
I + +GA+LGACK+H N EL E +A+ + ELGPE+ LLANIYA+ W
Sbjct: 482 IKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMW 541
Query: 465 KDSEIVKMMISETEKKKSPGCSWI 488
KD V+ + + +K+PG S I
Sbjct: 542 KDVARVRTAMEKKGLQKTPGWSII 565
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 2/205 (0%)
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
R S+ A+ Y KC +A++VFD + D W A+ Y +NG +A+E
Sbjct: 45 RGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEA 104
Query: 233 YKVMRQEN--VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
M+ E R V +V + AC + + D VS A++ +
Sbjct: 105 VVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAY 164
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
KCG ++ A F + ++ +S+++MI +AD+G + EA+ +F +M EG++ + +
Sbjct: 165 CKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVL 224
Query: 351 GVLTACSHGGLVEDGCKQFELMTRV 375
L AC G +++ + EL+ RV
Sbjct: 225 AALQACGELGYLDEVRRVHELLVRV 249
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 154/536 (28%), Positives = 256/536 (47%), Gaps = 98/536 (18%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D L YA VF+ I + +W +++R H + ++ +Y +M LG L + ++F +
Sbjct: 12 DGLPYAISVFETIQE-PNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70
Query: 110 LNACARVPSLLE------------------------------------------------ 121
L +CA+ + E
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 122 ----AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
A+I GY G A+++FD + ER+V+SW+AM+ GY G + A E + M
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 178 N---------SV-----------------TWV-----------------AMIAGYGKCGE 194
N SV +WV A+I Y KCG+
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
V A +F+ +S D W + Y K A+ +++ M + ++V ++ + A
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVS--NALIHMHSKCGYLDLAWREFSRIKNKDVI 312
C LG +++ + ++D+ TN S +LI M++KCG ++ A + F+ + + +
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S+++MI FA HG++ A D+F +MR +EP+ +TF+G+L+ACSH GL++ G + F+ M
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSM 430
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAEL 432
T+ + + P EH CM+DLLG SG ++A +I D W +LL ACK H N EL
Sbjct: 431 TQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLEL 490
Query: 433 GEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E A+ L+++ PE +G+ LL+NIYA+ G+W+D V+ +++ KK PGCS I
Sbjct: 491 AESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSI 546
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 273/551 (49%), Gaps = 79/551 (14%)
Query: 6 LVPRSKTFNQLKQVHS-YLLKTLTKPHDQYHYYAQFLIRLLQ---LPGDNLSYARQVFDQ 61
L+ QLKQ+H+ ++ +L+ Y QF+I + L L YA QVF+Q
Sbjct: 12 LIETCTNIQQLKQIHAKSIISSLS--------YTQFIITKIINSFLSHACLDYATQVFNQ 63
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL-GVLTSGFTFSSVLNACA------ 114
+ F++ ++IR + +I +Y KM +L +T+ V ACA
Sbjct: 64 TQE-PDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVE 122
Query: 115 --------------RVPSLLEAVICGYTKI-GLMDDAQRLFDSMAERNVISWSAMVAGYA 159
+ L++ + + + G + +AQ++FD ++V+ W+A++ GYA
Sbjct: 123 KGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYA 182
Query: 160 NCG------------------------------------NMKAAKEFY-----DRMTEKN 178
G N+K + + D + +
Sbjct: 183 RQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREG 242
Query: 179 SVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQ 238
A+I Y KCG + A+K+FDEI E + W ++ Y Q G IE+ + M
Sbjct: 243 VKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHL 302
Query: 239 ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDE-GCCDRTNYVSNALIHMHSKCGYLD 297
N++ + G +SAC Q+G + + + ++ G D ++ ALI M++KCG++
Sbjct: 303 SNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWDV--FIGTALIDMYAKCGFIG 360
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A + F ++ ++V +++++++ +A HG+++ A+++F +MR G P+ +TF+ VL AC+
Sbjct: 361 AARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACA 420
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
H GLVE+G + F+LM + + I P EH CMVDLLGR+G L++A LI + W
Sbjct: 421 HSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVW 480
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
GALL AC +H N E+GE AA H+++L G+ +LAN+YAS ++ + V+ M+ E
Sbjct: 481 GALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEK 540
Query: 478 EKKKSPGCSWI 488
KS GCS I
Sbjct: 541 GICKSHGCSMI 551
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 259/489 (52%), Gaps = 24/489 (4%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPG----DNLSYARQVFDQ 61
L+ + K+ +LK++H+ + + H Y+ F+ ++L ++ Y+ +VF Q
Sbjct: 20 LLDKCKSMLELKKLHA-----IGISYGLSHEYS-FIFKILSFSALSNSGDIDYSYRVFSQ 73
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE 121
I T F W +IR + + S+ ++ KM R GV T+ ++ A AR+
Sbjct: 74 ISS-PTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSK--- 129
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
K G+ AQ + + E + ++++ YA+CGN+ A + ++ M KN V+
Sbjct: 130 ------QKSGVSVHAQ-IIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVS 182
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +M+ GY KCGE+ A+KVF+ + E D W++ YV+ G + A+ +++ MR
Sbjct: 183 WNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGP 242
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ +EV MV +SAC LG ++ ++ +++ + T + +L+ M++KCG ++ A
Sbjct: 243 KANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALF 302
Query: 302 EFSRIKNK--DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F I DV +++MI A HG +E+L +F +M+ GI +++T++ +L AC+HG
Sbjct: 303 VFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHG 362
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
GLV++ FE + + G+ P +EH CMVD+L R+GQL A+ I A GA
Sbjct: 363 GLVKEAWNFFESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGA 421
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
+ C H N +L E R L+EL P G L+N+YA + +W DS+ ++ +
Sbjct: 422 IFSGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGV 481
Query: 480 KKSPGCSWI 488
KKSPG S++
Sbjct: 482 KKSPGFSFV 490
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 194/322 (60%)
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A++ + +++ +N V AMI+GY + G V +A+ +FD++ E D CW+AM Y ++
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
+ A+ ++ M+ ++ +V ++ ISAC +LG ++ A + +VD+ V+NAL
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNAL 121
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
I M++KCG L A F ++++++VIS++SMI AFA HG + AL F +M++E I+PN
Sbjct: 122 IDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNG 181
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
VTF+GVL ACSH GLVE+G + F MT I P EH CMVDL GR+ L A L+
Sbjct: 182 VTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVE 241
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
+ WG+L+ AC++H ELGE AA+ +LEL P+ G L+NIYA +W+D
Sbjct: 242 TMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQD 301
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
++ ++ + K GCS I
Sbjct: 302 VGELRNLMKQRGISKERGCSRI 323
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 54/227 (23%)
Query: 114 ARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR 173
+R +L A+I GY+++G ++DA+ +FD M E++++ WSAM++GYA + A +
Sbjct: 11 SRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSE 70
Query: 174 M----TEKNSVT------------------WV-----------------AMIAGYGKCGE 194
M + + VT W+ A+I Y KCG
Sbjct: 71 MQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGN 130
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISA 254
+ A+ VF+++ + W +M + +G A A++ + M+ EN++ + V VG + A
Sbjct: 131 LGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYA 190
Query: 255 CTQLGDVEMAA-----------ILAKHVDEGCC----DRTNYVSNAL 286
C+ G VE I KH GC R N + +AL
Sbjct: 191 CSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDAL 237
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 224/451 (49%), Gaps = 64/451 (14%)
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVI 149
++A+M R G+ F+ S ++ A A P +D AQ++FD + N+
Sbjct: 54 IHAQMLRTGLFFDPFSASRLITAAALSP------------FPSLDYAQQVFDQIPHPNLY 101
Query: 150 SWSAMVAGYANCGN---------------------------MKAAKEFYDRMTEK----- 177
+W+ ++ YA+ N +KAA E + T K
Sbjct: 102 TWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGM 161
Query: 178 --------NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ ++I Y KCGE+ +VF D W +M +VQ G + A
Sbjct: 162 VIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEA 221
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
+E+++ M +NV+ + + MVG +SAC + D E + +++ + +SNA++ M
Sbjct: 222 LELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDM 281
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD------------HGKSQEALDMFLKM 337
++KCG ++ A R F ++ KD++S+++M+ +A HG ++A+ +F KM
Sbjct: 282 YTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKM 341
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ + ++PN VTF +L ACSH GLVE+G F M V+G+ P +H CMVD+LGR+G
Sbjct: 342 QEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGL 401
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
LE+A LI A WGALLGAC +H N L E A L+EL P G LL+NI
Sbjct: 402 LEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNI 461
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
YA GKW ++ ++ + KK PGCS I
Sbjct: 462 YAKAGKWDRVSGLRKLMRDVGLKKEPGCSSI 492
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 82/333 (24%)
Query: 6 LVPRSKTFNQLKQVHSYLLKT--LTKPHDQYHYYAQFLIRLLQL-PGDNLSYARQVFDQI 62
L+ + QLKQ+H+ +L+T P + A LI L P +L YA+QVFDQI
Sbjct: 41 LIDQCSETKQLKQIHAQMLRTGLFFDP-----FSASRLITAAALSPFPSLDYAQQVFDQI 95
Query: 63 PKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-HRLGVLTSGFTFSSVLNACARVPSL-- 119
P + W +LIR + ++ QS+L++ +M H+ FTF ++ A + + L
Sbjct: 96 PH-PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154
Query: 120 -------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN 160
L ++I Y K G + R+F + R+V+SW++M+ +
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQ 214
Query: 161 CGNMKAAKEFYDRM----TEKNSVT------------------WV--------------- 183
G + A E + M + N +T WV
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTL 274
Query: 184 --AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ------------NGYAKAA 229
AM+ Y KCG V +AK++FD++ E D W M V Y + +G+ K A
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDA 334
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
I ++ M+++ V+ + V + AC+ +G VE
Sbjct: 335 IALFSKMQEDKVKPNAVTFTNILCACSHVGLVE 367
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 53/263 (20%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +VF P+ + W S+I V +++ L+ +M V +G T VL+
Sbjct: 187 LGLGYRVFVNXPR-RDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLS 245
Query: 112 ACAR---------VPSLLE------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
ACA+ V S +E A++ YTK G ++DA+RLFD M E++++S
Sbjct: 246 ACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVS 305
Query: 151 WSAMVAGYANCGNMKAAK------------EFYDRMTE----KNSVTWVAMIAGYGKCGE 194
W+ M+ GYA G AA+ + +M E N+VT+ ++ G
Sbjct: 306 WTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGL 365
Query: 195 VREAKKVFDEIS-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
V E + F+++ P +A M + G + A+E+ + M A++
Sbjct: 366 VEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 425
Query: 250 GAIS----------ACTQLGDVE 262
GA + AC+QL ++E
Sbjct: 426 GACTIHENVVLAEQACSQLIELE 448
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 275/540 (50%), Gaps = 72/540 (13%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
+F + +Q H++++K+ + + L+ L G + R+VFD + K W
Sbjct: 75 SFTRGRQFHAHVVKSGLETD---RFVGNSLLSLYFKLGSDSLLTRRVFDGL-FVKDVVSW 130
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV--------------- 116
S+I +V +I L+ M G+ +GFT S+V+ AC+ +
Sbjct: 131 ASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVR 190
Query: 117 ------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY------------ 158
P +L ++I Y + + DA++LFD + E + + W+ +++ +
Sbjct: 191 RGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGF 250
Query: 159 ------------------------ANCGNMKAAKEFYDRMT----EKNSVTWVAMIAGYG 190
N G ++ +E + ++ N VT +++ YG
Sbjct: 251 FYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYG 310
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
KCG V +++++FD +S ++ W+A+ Y NG + A+ +++ M++ ++ +
Sbjct: 311 KCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDL----YSFGT 366
Query: 251 AISACTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
I AC L V I +++ +G R V +AL+ +++KCG ++ A+R F R+ +
Sbjct: 367 VIRACAGLAAVTPGKEIHCQYIRKGGW-RDVIVESALVDLYAKCGCINFAYRVFDRMPTR 425
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
++I+++SMI FA +G S A+ +F M EGI+P+ ++FIG+L ACSH GLV+ F
Sbjct: 426 NLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYF 485
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH-V 428
+LMT +GIKP EH CMVDLLGR+G LE+A +LI + + D+ W LLGAC
Sbjct: 486 DLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCT 545
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
N+ E A+ L+EL P+ + LAN+Y ++G+W D+ V+ ++ + KK PG SW+
Sbjct: 546 NSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM 605
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 148/317 (46%), Gaps = 15/317 (4%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRL------FDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
PS+ + I + K GL++DA L +DS + ++ +++++ + ++F
Sbjct: 24 PSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKPLL-YASLLQTCIKVDSFTRGRQF 82
Query: 171 YDRMT----EKNSVTWVAMIAGYGKCG-EVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
+ + E + ++++ Y K G + ++VFD + D WA+M YV+ G
Sbjct: 83 HAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGK 142
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA 285
+ AIE++ M + + + I AC+++G++ + V D + ++
Sbjct: 143 SGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSS 202
Query: 286 LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF-LKMRNEGIEP 344
LI M+ + A + F + D + ++++I+AF + +EAL F LK R + P
Sbjct: 203 LIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCP 262
Query: 345 NQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL 404
+ TF VLTAC + G + G ++ +G + +VD+ G+ G +EK+ L
Sbjct: 263 DNYTFGSVLTACGNLGRLRQG-EEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRL 321
Query: 405 IMDYKDFCDAGTWGALL 421
D ++ +W ALL
Sbjct: 322 -FDRMSNRNSVSWSALL 337
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 265/536 (49%), Gaps = 66/536 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
+ H+ ++KTL P + Y L+ + D + A+ + P ++ WT+LI
Sbjct: 26 RAAHAQIIKTLDNPLPSFIY--NHLVNMYS-KLDRPNSAQLLLSLTPN-RSVVTWTALIA 81
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------AVICG--- 126
V + F ++ ++ M R + + FTF A + S L AV G
Sbjct: 82 GSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQIS 141
Query: 127 -----------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN----MKAAKEFY 171
Y+K GL ++A+++FD M ERN+ +W+A ++ G + A EF
Sbjct: 142 DVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFR 201
Query: 172 DRMTEKNSVTWVA-----------------------------------MIAGYGKCGEVR 196
E N +T+ A +I YGKC +V
Sbjct: 202 HEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVG 261
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
++ +F IS+P+ W +M V YVQN + A ++ R+E + ++ + +SAC
Sbjct: 262 CSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACA 321
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
L +E+ + + C +V +AL+ M+ KCG ++ A R F + ++++++++
Sbjct: 322 GLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNA 381
Query: 317 MITAFADHGKSQEALDMFLKMR--NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
MI +A G++ A+ +F +M + + PN VTF+ VL+ACS G V G + FE M
Sbjct: 382 MIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRG 441
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+GI+P EH C+VDLLGR+G +E+A+ I WGALLGA K+ +ELG+
Sbjct: 442 RYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGK 501
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
+AA +L EL P +GN LL+N++A+ G+W+++ +V+ + + KK GCSWI++
Sbjct: 502 VAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITA 557
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 146/332 (43%), Gaps = 59/332 (17%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
+F I K W S+I ++V + ++ L++ + + G+ + F SSVL+ACA +
Sbjct: 266 IFSGISK-PNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLS 324
Query: 118 SL----------LEAVICG-----------YTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
L ++A + G Y K G ++DA+R FD M ERN+++W+AM+
Sbjct: 325 VLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIG 384
Query: 157 GYANCGNMKAAKEFYDRMT------EKNSVTWVAMIAGYGKCGEVREAKKVFDEIS---- 206
GYA+ G A +D MT N VT+V +++ + G V ++F+ +
Sbjct: 385 GYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYG 444
Query: 207 -EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAA 265
EP A +A + + G + A Y+ +++ +R + + A G E+
Sbjct: 445 IEPGAEHYACVVDLLGRAGMVEQA---YQFIKKMPIRPTVSVWGALLGASKMFGKSELGK 501
Query: 266 ILAKHVDE-GCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN--KDV----------I 312
+ A ++ E D N+V L +M + G W E + ++ KDV I
Sbjct: 502 VAADNLFELDPLDSGNHV--LLSNMFAAAGR----WEEATLVRKEMKDVGIKKGAGCSWI 555
Query: 313 SYSSMITAF----ADHGKSQEALDMFLKMRNE 340
+ + + F H ++ E M K+R E
Sbjct: 556 TAGNAVHVFQAKDTSHERNSEIQAMLAKLRGE 587
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 238/493 (48%), Gaps = 61/493 (12%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
VF I K +W++LI +SI L+ M L + +T S+L+A
Sbjct: 371 VFKTIKKPDI-VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTG 429
Query: 118 SLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
+L A++ Y K G + D +L++SM +R++ISW+A ++
Sbjct: 430 NLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLS 489
Query: 157 GYANCGNMKAAKEFYDRMTEK--------------------------------------- 177
G +CG + M E+
Sbjct: 490 GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD 549
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
N+ A+I Y KC + +A F+ +S D W + Y Q + A+ ++ M+
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
QE V+ +E + G +S C+ L +E L V + +V +AL+ M++KCG ++
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A F + +D I+++++I +A +G+ +AL F M +EGI P+ VTF G+L+ACS
Sbjct: 670 EAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACS 729
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
H GLVE+G + F M R FGI P +H CMVD+LGR G+ ++ I + +A W
Sbjct: 730 HQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIW 789
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
+LGA K+H N LGE AA L EL PE+ + LL+NI+A+ G+W D + V+ ++S
Sbjct: 790 ETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSK 849
Query: 478 EKKKSPGCSWISS 490
KK PGCSW+ +
Sbjct: 850 GVKKEPGCSWVEA 862
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 61/365 (16%)
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA 112
+YAR V ++P + WT+LI+ V SI L+ +M G++ + FT ++ L A
Sbjct: 164 AYARLVLAKMPD-RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKA 222
Query: 113 CA----------------RVPSLLE-----AVICGYTKIGLMDDAQRLFDSMAERNVISW 151
C+ ++ LL+ A++ Y K G ++ A ++F M E+N ++W
Sbjct: 223 CSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTW 282
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAG------------------- 188
+ ++ GYA G++ + + M E N T ++ G
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIK 342
Query: 189 ----------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
Y KCG +A VF I +PD W+A+ C Q G ++ +I++
Sbjct: 343 CGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKL 402
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ +MR + ++ + +SA T G+++ + V + + VSNAL+ M+ K
Sbjct: 403 FHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK 462
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
G + + + + ++D+IS+++ ++ D G L +F M EG PN TFI +
Sbjct: 463 NGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISI 522
Query: 353 LTACS 357
L +CS
Sbjct: 523 LGSCS 527
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 122/268 (45%), Gaps = 5/268 (1%)
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
+S WV+++ Y KC A+ V ++ + D W A+ V G+A +I +++ M+
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ 205
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
E + +E + + AC+ +++ + + +V +AL+ +++KCG ++
Sbjct: 206 NEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIE 265
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
LA + F + ++ ++++ ++ +A G L +F M ++ N+ T VL C+
Sbjct: 266 LASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCA 325
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTC-MVDLLGRSGQLEKAHSLIMDYKDFCDAGT 416
+ ++ G L+ + G + E + C +VD+ + G A + K D
Sbjct: 326 NSKNLKQGQVIHSLIIKC-GYEG-NEFIGCGLVDMYSKCGLAIDAIGVFKTIKK-PDIVV 382
Query: 417 WGALLGACKVHVNAELGEIAARHLLELG 444
W AL+ +E I HL+ LG
Sbjct: 383 WSALITCLDQQGQSE-ESIKLFHLMRLG 409
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 38/218 (17%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLI----RLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
+QVH++++K D ++ LI + + L ++++ R + F WT
Sbjct: 536 RQVHAHIIKNQL---DDNNFVCTALIDMYAKCMYLEDADVAFNRL------SVRDLFTWT 586
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL------------ 120
+I N+ +++ + +M + GV + FT + L+ C+ + SL
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS 646
Query: 121 ---------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN----MKAA 167
A++ Y K G M++A+ LF+++ R+ I+W+ ++ GYA G + A
Sbjct: 647 GHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAF 706
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
+ D + VT+ +++ G V E K+ F+ +
Sbjct: 707 RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSM 744
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/499 (30%), Positives = 242/499 (48%), Gaps = 63/499 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQ F+ I + + W +I +V ++ L+ +M+ LG+L + +S+L+
Sbjct: 479 LEDARQQFELI-RNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILS 537
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
ACA V L + ++I Y K G +D A ++ M ER+V+S
Sbjct: 538 ACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVS 597
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE---------------- 194
+A++AGYA +A F D + E + T + + C E
Sbjct: 598 MNALIAGYAQINLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILK 657
Query: 195 -----------------------VREAKKVFDEISEP-DASCWAAMTVCYVQNGYAKAAI 230
+A +F E S P A W AM QN + A+
Sbjct: 658 MGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVAL 717
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++YK MR NV + V A+ AC + ++ + D S+AL+ M+
Sbjct: 718 QLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMY 777
Query: 291 SKCGYLDLAWREFSRI-KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
+KCG + + + F + + KDVIS++SMI FA +G +++AL +F +M+ + P+ VTF
Sbjct: 778 AKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTF 837
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+GVLTACSH G V +G F++M ++G++P +H CMVDLLGR G L++A I
Sbjct: 838 LGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLN 897
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
DA W +LGAC++H + G+ AA L+EL P+ + LL+NIYA+ G W +
Sbjct: 898 FEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNT 957
Query: 470 VKMMISETEKKKSPGCSWI 488
++ + E KK PGCSWI
Sbjct: 958 LRREMREKGVKKLPGCSWI 976
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 181/393 (46%), Gaps = 55/393 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L+ AR +FD + + WTS+I ++ +++ ++ +M ++G F +V+N
Sbjct: 211 LTDARSIFDGAVELD-KVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVIN 269
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A Y +G +D+A LF M RNV++W+ M++G+A G A EF+
Sbjct: 270 A--------------YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFF 315
Query: 172 DRMTE---------------------------------------KNSVTWVAMIAGYGKC 192
M + N ++++ Y KC
Sbjct: 316 QNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKC 375
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G++ AKKVFD ++E + W AM YVQNGYA +E++ M+ + +
Sbjct: 376 GKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSIL 435
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
SAC L +++ L + + +V NAL+ M++K G L+ A ++F I+N+D +
Sbjct: 436 SACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNV 495
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++ +I + EA +F +M GI P++V+ +L+AC+ +E G KQ +
Sbjct: 496 SWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQG-KQVHCL 554
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+ G + + ++D+ + G ++ AH ++
Sbjct: 555 SVKTGQETKLYSGSSLIDMYAKCGAIDSAHKIL 587
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 173/383 (45%), Gaps = 41/383 (10%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ YA + F Q+ K W S++ H + + + GV + FTF+ VL
Sbjct: 109 DVDYAERAFKQLED-KDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVL 167
Query: 111 NACARVPSLLEAVICG-------------------------YTKIGLMDDAQRLFDSMAE 145
++CAR LE V CG Y K + DA+ +FD E
Sbjct: 168 SSCAR----LEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVE 223
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKV 201
+ +SW++M+ GY G + A + + M E + V +V +I Y G + A +
Sbjct: 224 LDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDL 283
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
F + + W M + + GY AIE ++ MR+ ++ + + +SA L +
Sbjct: 284 FSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAAL 343
Query: 262 EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
+ ++ + YV ++L+ M++KCG ++ A + F + ++V+ +++M+ +
Sbjct: 344 DFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGY 403
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
+G + E +++F M++ G P+ T+ +L+AC+ ++ G + ++ +
Sbjct: 404 VQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIK----NKF 459
Query: 382 TEHL---TCMVDLLGRSGQLEKA 401
+L +VD+ +SG LE A
Sbjct: 460 ASNLFVGNALVDMYAKSGALEDA 482
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 183/433 (42%), Gaps = 68/433 (15%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A +F ++P + W +I H + ++I + M + G+ ++ T SVL+
Sbjct: 277 LDNASDLFSRMPN-RNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLS 335
Query: 112 ACARVPSL-------LEAVICG--------------YTKIGLMDDAQRLFDSMAERNVIS 150
A A + +L EA+ G Y K G M+ A+++FD++ E+NV+
Sbjct: 336 AIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVL 395
Query: 151 WSAMVAGYANCG----------NMKAAKEFYDRMT------------------------- 175
W+AM+ GY G NMK+ + D T
Sbjct: 396 WNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVII 455
Query: 176 ----EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIE 231
N A++ Y K G + +A++ F+ I D W + V YVQ A
Sbjct: 456 KNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFH 515
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
+++ M + EV++ +SAC + +E + + + Y ++LI M++
Sbjct: 516 LFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYA 575
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG +D A + + + + V+S +++I +A Q A+++F M EGI ++TF
Sbjct: 576 KCGAIDSAHKILACMPERSVVSMNALIAGYAQINLEQ-AVNLFRDMLVEGINSTEITFAS 634
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLG---RSGQLEKAHSLIMDY 408
+L AC + G +Q + G++ E L V LLG S + A L ++
Sbjct: 635 LLDACHEQQKLNLG-RQIHSLILKMGLQLDDEFLG--VSLLGMYMNSLRTTDASVLFSEF 691
Query: 409 KDFCDAGTWGALL 421
+ A W A++
Sbjct: 692 SNPKSAVVWTAMI 704
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y KC +V A++ F ++ + D W ++ + + G+ ++ + ++ V +E
Sbjct: 104 YAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTF 163
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
+S+C +L V+ + +V + + +Y ALI M++KC +L A F
Sbjct: 164 AIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVE 223
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
D +S++SMI + G +EA+ +F +M G EP+QV F+ V+ A G +++
Sbjct: 224 LDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDL 283
Query: 369 FELM 372
F M
Sbjct: 284 FSRM 287
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 166/411 (40%), Gaps = 116/411 (28%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVP 117
+FD+IP+ +QF T N ++HA QS+ +LG + G
Sbjct: 63 LFDEIPQRLSQFSTT----NKIIHA---QSL-------KLGFWSKGV------------- 95
Query: 118 SLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK 177
L ++ Y K +D A+R F + ++++++W+++++ ++ G +++ +
Sbjct: 96 -LGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLW-- 152
Query: 178 NSVTWV-----------------------------------------AMIAGYGKCGEVR 196
NS W A+I Y KC +
Sbjct: 153 NSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLT 212
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
+A+ +FD E D W +M Y++ G + A+++++ M + +VA V I+A
Sbjct: 213 DARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYV 272
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
LG ++ A+ L FSR+ N++V++++
Sbjct: 273 DLGRLDNASDL-----------------------------------FSRMPNRNVVAWNL 297
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI+ A G EA++ F MR GI+ + T VL+A + ++ F L+
Sbjct: 298 MISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD-----FGLLVHAE 352
Query: 377 GIKP-LTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+K L ++ + +V + + G++E A + D + + W A+LG
Sbjct: 353 ALKQGLHSNVYVGSSLVSMYAKCGKMEAAKK-VFDTLNEQNVVLWNAMLGG 402
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
+ N ++ +++KC +D A R F ++++KD+++++S+++ + G + F + N G
Sbjct: 96 LGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSG 155
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
+ PN+ TF VL++C+ +V+ G +Q G + ++ ++ + + L A
Sbjct: 156 VWPNEFTFAIVLSSCARLEMVKCG-RQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDA 214
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNS------ALLA 455
S I D D +W +++G ++ L E A + E+ EK G +
Sbjct: 215 RS-IFDGAVELDKVSWTSMIGG---YIKVGLPEEAVKVFQEM--EKVGQEPDQVAFVTVI 268
Query: 456 NIYASMGKWKDS 467
N Y +G+ ++
Sbjct: 269 NAYVDLGRLDNA 280
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 256/508 (50%), Gaps = 46/508 (9%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQY-HYYAQFLIRLLQL------PGDNLSYARQVFDQIPKC 65
N LK++H +L +DQY + I+L+++ PG AR +FD+I
Sbjct: 34 INTLKKLHGKVL------NDQYLRWNPSVGIKLMRVYAACGEPG----LARHIFDEITD- 82
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL----- 120
K + +IR++V + ++ ++L+Y M+ G + +T+ VL A +R SL
Sbjct: 83 KNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQI 142
Query: 121 ----------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNM 164
+I Y K + +AQ++ D + R+V+SW++MV+ YA G
Sbjct: 143 HGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRF 202
Query: 165 KAAKEFYDRMT----EKNSVTWVAMIAGYGKC--GEVREAKKVFDEISEPDASCWAAMTV 218
A E M + N T +++ V K++F ++++ W M
Sbjct: 203 NDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVMIA 262
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
YV N K A+ +Y M V V++V + A L + + + K +
Sbjct: 263 MYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLP 322
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
+ NALI M++KCG L A F++++ +DV+S++S+I+A+ G+ ++A+ +F +MR
Sbjct: 323 NLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMR 382
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQL 398
N G+ P+ + F+ VL ACSH GL++DG F LM GI P EH C+VDLLGR+G++
Sbjct: 383 NSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAEC-GITPKLEHFACVVDLLGRAGKI 441
Query: 399 EKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIY 458
++A+ I D WG LL AC+V+ N +G +AA LL L PE +G LL+NIY
Sbjct: 442 DEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIY 501
Query: 459 ASMGKWKDSEIVKMMISETEKKKSPGCS 486
A G+W D ++ ++ KK PG S
Sbjct: 502 AKAGRWADVAAIRSIMERKGIKKLPGIS 529
>gi|297828247|ref|XP_002882006.1| hypothetical protein ARALYDRAFT_903976 [Arabidopsis lyrata subsp.
lyrata]
gi|297327845|gb|EFH58265.1| hypothetical protein ARALYDRAFT_903976 [Arabidopsis lyrata subsp.
lyrata]
Length = 412
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 199/354 (56%), Gaps = 1/354 (0%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A +LF M E+++ISW++M+ GY G ++ AK +D M ++ VT MI GY K G V
Sbjct: 39 ASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFV 98
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISA 254
+AK +FD++ D + +M YVQN A+E++ M +E ++ E +V +SA
Sbjct: 99 HQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSA 158
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
QLG + A + ++ E + ALI M+SKCG + A F I+NK + +
Sbjct: 159 IAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 218
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
++MI A HG + A +M L++ I P+ +TF+GVL ACSH GLV++G FELM R
Sbjct: 219 NAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRR 278
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
I+P +H CMVD+L RSG +E A +LI + + W L AC H E GE
Sbjct: 279 KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGE 338
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ A+HL+ + LL+N+YAS G WKD V+ M+ E + +K PGCSWI
Sbjct: 339 LVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 392
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ +A VF+ I K+ W ++I +H + + ++ RL ++ TF VL
Sbjct: 199 SIQHAMLVFEGIEN-KSIDHWNAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVL 257
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
NAC+ + E ++C LM ++ E + + MV + G+++ AK
Sbjct: 258 NACSHSGLVKEGLLC----FELMRRKHKI-----EPRLQHYGCMVDILSRSGSIELAKNL 308
Query: 171 YDRMT-EKNSVTW 182
+ M E N V W
Sbjct: 309 IEEMPIEPNDVIW 321
>gi|297828245|ref|XP_002882005.1| hypothetical protein ARALYDRAFT_903974 [Arabidopsis lyrata subsp.
lyrata]
gi|297327844|gb|EFH58264.1| hypothetical protein ARALYDRAFT_903974 [Arabidopsis lyrata subsp.
lyrata]
Length = 408
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 199/354 (56%), Gaps = 1/354 (0%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A +LF M E+++ISW++M+ GY G ++ AK +D M ++ VT MI GY K G V
Sbjct: 35 ASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFV 94
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISA 254
+AK +FD++ D + +M YVQN A+E++ M +E ++ E +V +SA
Sbjct: 95 HQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSA 154
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
QLG + A + ++ E + ALI M+SKCG + A F I+NK + +
Sbjct: 155 IAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 214
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
++MI A HG + A +M L++ I P+ +TF+GVL ACSH GLV++G FELM R
Sbjct: 215 NAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRR 274
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
I+P +H CMVD+L RSG +E A +LI + + W L AC H E GE
Sbjct: 275 KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGE 334
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ A+HL+ + LL+N+YAS G WKD V+ M+ E + +K PGCSWI
Sbjct: 335 LVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 388
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ +A VF+ I K+ W ++I +H + + ++ RL ++ TF VL
Sbjct: 195 SIQHAMLVFEGIEN-KSIDHWNAMIGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVL 253
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
NAC+ + E ++C LM ++ E + + MV + G+++ AK
Sbjct: 254 NACSHSGLVKEGLLC----FELMRRKHKI-----EPRLQHYGCMVDILSRSGSIELAKNL 304
Query: 171 YDRM-TEKNSVTW 182
+ M E N V W
Sbjct: 305 IEEMPIEPNDVIW 317
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 236/496 (47%), Gaps = 63/496 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A Q+FDQIP+ + +LI + ++ L++ M +G+ GFT S+V+ AC
Sbjct: 93 AHQLFDQIPE-PDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACC 151
Query: 115 RVPSLL-------------------EAVICGYTKIGLMDDAQRLFDSMAE-RNVISWSAM 154
L+ A++ Y K G +DDA+R+F M R+ +SW++M
Sbjct: 152 DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSM 211
Query: 155 VAGYANCGNMKAAKEFYDRMTEK------------------------------------- 177
+ Y A + M +
Sbjct: 212 IVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGF 271
Query: 178 --NSVTWVAMIAGYGKCGE-VREAKKVFDEISEPDASCWAAMTVCYVQNG-YAKAAIEMY 233
NS +I Y KCG + + +KVF+EI+EPD W M Y QN + + A+E +
Sbjct: 272 HQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECF 331
Query: 234 KVMRQENVRISEVAMVGAISACTQLGDVEMAA-ILAKHVDEGCCDRTNYVSNALIHMHSK 292
+ M+ R ++ + V ISAC+ L I + + V NALI M+SK
Sbjct: 332 RQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSK 391
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG L A R F R+ + +S +SMI +A HG E+L +F M I P +TFI V
Sbjct: 392 CGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISV 451
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+AC+H G VE+G F +M F I+P EH +CM+DLLGR+G+L +A +LI
Sbjct: 452 LSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNP 511
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
+ W +LLGAC+ H N EL AA +L+L P +L+N+YAS G+W++ V+
Sbjct: 512 GSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRK 571
Query: 473 MISETEKKKSPGCSWI 488
+ + KK PGCSWI
Sbjct: 572 FMRDRGVKKKPGCSWI 587
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 143/322 (44%), Gaps = 60/322 (18%)
Query: 83 HFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDS 142
HF ILLY+K RL F S N + A+I Y K A +LFD
Sbjct: 48 HF---ILLYSKCGRLAWARKAFQDISDPNVFS-----FNAIIAAYAKESRPLIAHQLFDQ 99
Query: 143 MAERNVISWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAG---------- 188
+ E +++S++ +++ YA+CG A + M E + T A+I
Sbjct: 100 IPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQ 159
Query: 189 -----------------------YGKCGEVREAKKVF-------DEISEPDASCWAAMTV 218
YGK G++ +AK+VF DE+S W +M V
Sbjct: 160 LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVS------WNSMIV 213
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
Y Q+ A+ +++ M + + + + ++A T L D+ + + +
Sbjct: 214 AYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQ 273
Query: 279 TNYVSNALIHMHSKC-GYLDLAWREFSRIKNKDVISYSSMITAFADHGKS-QEALDMFLK 336
++V + LI ++SKC G + + F I D++ +++M++ ++ + + ++AL+ F +
Sbjct: 274 NSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQ 333
Query: 337 MRNEGIEPNQVTFIGVLTACSH 358
M+ G PN +F+ V++ACS+
Sbjct: 334 MQGIGYRPNDCSFVCVISACSN 355
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 14/223 (6%)
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
Y+ CG + A++ + +++ N ++ A+IA Y K A ++FD+I EPD + +
Sbjct: 53 YSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLI 112
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
Y G A+ ++ MR+ + + + I+AC DV + L D
Sbjct: 113 SAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFD 170
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKN-KDVISYSSMITAFADHGKSQEALDMFLK 336
V+NAL+ + K G LD A R F + +D +S++SMI A+ H + +AL +F +
Sbjct: 171 SYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQE 230
Query: 337 MRNEGIEPNQVTFIGVLTACS-----------HGGLVEDGCKQ 368
M G+ + T VLTA + HG L++ G Q
Sbjct: 231 MVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQ 273
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 39/286 (13%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q H L+KT Q + LI L G +S R+VF++I + LW +++
Sbjct: 261 QFHGQLIKT---GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE-PDLVLWNTMVSG 316
Query: 78 HVLHAHFRQSIL-LYAKMHRLGVLTSGFTFSSVLNACAR------------------VPS 118
+ + F + L + +M +G + +F V++AC+ +PS
Sbjct: 317 YSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPS 376
Query: 119 ----LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
+ A+I Y+K G + DA+RLFD MAE N +S ++M+AGYA G + + M
Sbjct: 377 NRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWM 436
Query: 175 TEKN----SVTWVAMIAGYGKCGEVREAKKVFDEIS-----EPDASCWAAMTVCYVQNGY 225
E+ S+T++++++ G V E F+ + EP+A ++ M + G
Sbjct: 437 LERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGK 496
Query: 226 AKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV 271
A + M I +++G AC G++E+A A V
Sbjct: 497 LSEAENLIARMPFNPGSIGWASLLG---ACRTHGNIELAVKAANQV 539
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 161/416 (38%), Gaps = 110/416 (26%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
+ Q+HS ++ D Y L+ GD L A++VF + + + W S+I
Sbjct: 157 IGQLHSV---AVSSGFDSYVSVNNALLTYYGKNGD-LDDAKRVFYGMGGIRDEVSWNSMI 212
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL--------------- 120
+ H +++ L+ +M R G+ FT +SVL A + L
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272
Query: 121 ------EAVICGYTKI-GLMDDAQRLFDSMAERNVISWSAMVAGYA-NCGNMKAAKEFYD 172
+I Y+K G M D +++F+ + E +++ W+ MV+GY+ N ++ A E +
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332
Query: 173 RMT----EKNSVTWV------------------------------------AMIAGYGKC 192
+M N ++V A+IA Y KC
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G +++A+++FD ++E + +M Y Q+G ++ +++ M + + + + + +
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
SAC G VE EG W F+ +K K I
Sbjct: 453 SACAHTGRVE----------EG-------------------------WNYFNMMKEKFNI 477
Query: 313 S-----YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
YS MI GK EA ++ +M P + + +L AC G +E
Sbjct: 478 EPEAEHYSCMIDLLGRAGKLSEAENLIARMP---FNPGSIGWASLLGACRTHGNIE 530
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 277 DRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLK 336
D + NA+I ++K +A + F +I D++SY+++I+A+AD G++ AL +F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 337 MRNEGIEPNQVTFIGVLTACSHG-GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRS 395
MR G++ + T V+TAC GL+ Q + G ++ G++
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGLI----GQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 396 GQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
G L+ A + D +W +++ A H
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQH 218
>gi|42562381|ref|NP_174190.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806502|sp|Q1PFQ9.2|PPR62_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g28690, mitochondrial; Flags: Precursor
gi|332192893|gb|AEE31014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 520
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/477 (31%), Positives = 253/477 (53%), Gaps = 16/477 (3%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H+ ++KT +P + + LI L L LSYARQVFD++PK T + +I
Sbjct: 54 KKIHADIIKTGFQP--DLNISIKLLI--LHLKCGCLSYARQVFDELPK-PTLSAYNYMIS 108
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--LLEAVICGYTKIGLMD 134
++ H ++ +LL +M G G+T S VL A S +L +C
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVH----- 163
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
R+ E + + +A+V Y G +++A+ ++ M ++N V +MI+GY G
Sbjct: 164 --ARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 221
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNG-YAKAAIEMYKVMRQENVRISEVAMVGAIS 253
V +A+++F+ D + AM + ++G AK +++MY M++ + I
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
AC+ L E+ + + + + ++L+ M++KCG ++ A R F +++ K+V S
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++SMI + +G +EAL++F +M+ IEPN VTF+G L+ACSH GLV+ G + FE M
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
R + +KP EH C+VDL+GR+G L KA + D+ W ALL +C +H N EL
Sbjct: 402 RDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Query: 434 EIAARHLLELGPEKTGNSAL-LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
IAA L +L +K + L L+N+YAS KW + ++ ++ K+ G SW S
Sbjct: 462 SIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 518
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 209/401 (52%), Gaps = 40/401 (9%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVT- 181
Y + G ++ A+RLFD M R+++SW++M+ GYA A + RM E N T
Sbjct: 119 YARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTL 178
Query: 182 -----------------------W-----------VAMIAGYGKCGEVREAKKVFDEISE 207
W +++ Y +CG + EA VFD++
Sbjct: 179 SSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGC 238
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAIL 267
+ W A+ Y + G + A+ ++ M++E R +E +S+C+ +G +E L
Sbjct: 239 KNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWL 298
Query: 268 AKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKS 327
H+ + YV N L+HM++K G + A + F ++ DV+S +SM+ +A HG
Sbjct: 299 HAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLG 358
Query: 328 QEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
+EA F +M GIEPN +TF+ VLTACSH L+++G F LM R + I+P H
Sbjct: 359 KEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVSHYAT 417
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
+VDLLGR+G L++A S I + WGALLGA K+H N E+G AA+ + EL P
Sbjct: 418 IVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSY 477
Query: 448 TGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
G LLANIYAS G+W+D V+ ++ ++ KK P CSW+
Sbjct: 478 PGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWV 518
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 20/232 (8%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ CTQLG ++ ++ HV + N+L+ M+++CG L+ A R F + ++D+
Sbjct: 81 LKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDM 140
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSH------GGLVEDG 365
+S++SMIT +A + ++ +AL +F +M ++G EPN+ T ++ C + G +
Sbjct: 141 VSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHAC 200
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL-GAC 424
C ++ + VF L VD+ R G L +A L+ D + +W AL+ G
Sbjct: 201 CWKYGCHSNVFVGSSL-------VDMYARCGYLGEA-MLVFDKLGCKNEVSWNALIAGYA 252
Query: 425 KVHVNAELGEIAARHLLE-LGPEKTGNSALLANIYA----SMGKWKDSEIVK 471
+ E + R E P + SALL++ + GKW + ++K
Sbjct: 253 RKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMK 304
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 35/252 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A VFD++ CK + W +LI + +++ L+ +M R G + FT+S++L+
Sbjct: 226 LGEAMLVFDKL-GCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLS 284
Query: 112 ACARVPSLLEA---------------------VICGYTKIGLMDDAQRLFDSMAERNVIS 150
+C+ + L + ++ Y K G + DA+++FD + + +V+S
Sbjct: 285 SCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVS 344
Query: 151 WSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
++M+ GYA G K A + +D M E N +T+++++ + E K F +
Sbjct: 345 CNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMR 404
Query: 207 ----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL-GDV 261
EP S +A + + G A + M E VA+ GA+ +++ +
Sbjct: 405 KYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIE----PTVAIWGALLGASKMHKNT 460
Query: 262 EMAAILAKHVDE 273
EM A A+ V E
Sbjct: 461 EMGAYAAQRVFE 472
>gi|116830928|gb|ABK28420.1| unknown [Arabidopsis thaliana]
Length = 521
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/477 (31%), Positives = 253/477 (53%), Gaps = 16/477 (3%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H+ ++KT +P + + LI L L LSYARQVFD++PK T + +I
Sbjct: 54 KKIHADIIKTGFQP--DLNISIKLLI--LHLKCGCLSYARQVFDELPK-PTLSAYNYMIS 108
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--LLEAVICGYTKIGLMD 134
++ H ++ +LL +M G G+T S VL A S +L +C
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVH----- 163
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
R+ E + + +A+V Y G +++A+ ++ M ++N V +MI+GY G
Sbjct: 164 --ARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 221
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNG-YAKAAIEMYKVMRQENVRISEVAMVGAIS 253
V +A+++F+ D + AM + ++G AK +++MY M++ + I
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
AC+ L E+ + + + + ++L+ M++KCG ++ A R F +++ K+V S
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++SMI + +G +EAL++F +M+ IEPN VTF+G L+ACSH GLV+ G + FE M
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
R + +KP EH C+VDL+GR+G L KA + D+ W ALL +C +H N EL
Sbjct: 402 RDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Query: 434 EIAARHLLELGPEKTGNSAL-LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
IAA L +L +K + L L+N+YAS KW + ++ ++ K+ G SW S
Sbjct: 462 SIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 518
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 243/478 (50%), Gaps = 60/478 (12%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-----LEAVIC 125
W+++I R++ ++ +M GV+ + FT +S+++A + L + A +C
Sbjct: 399 WSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVC 458
Query: 126 GY----------------TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
Y KIG + D R+F++ R++ISW+A+++G+ +
Sbjct: 459 KYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLR 518
Query: 170 FYDRMT---------------------------------------EKNSVTWVAMIAGYG 190
+++M + N A++ Y
Sbjct: 519 IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYA 578
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
K + +A+ +F+ + + D W + Y Q+G + A++ + M++E V+ +E +
Sbjct: 579 KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLAS 638
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
++S C+++ ++ L + +V++AL+ M++KCG ++ A F + ++D
Sbjct: 639 SLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRD 698
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+S++++I ++ HG+ +AL F M +EG P++VTFIGVL+ACSH GL+E+G K F
Sbjct: 699 TVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFN 758
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
+++++GI P EH CMVD+LGR+G+ + S I + K + W +LGACK+H N
Sbjct: 759 SLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNI 818
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E GE AA L EL PE N LL+N++A+ G W D V+ ++S KK PGCSW+
Sbjct: 819 EFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWV 876
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 203/453 (44%), Gaps = 66/453 (14%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWT 72
N+ K +H ++K+ P D + + + L+ + G + +YA +VF +IP+ + WT
Sbjct: 144 LNEGKAIHGQVIKSGINP-DSHLWNS--LVNVYAKCG-SANYACKVFGEIPE-RDVVSWT 198
Query: 73 SLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-------LEAVIC 125
+LI V + ++ L+ +M R GV + FT+++ L AC+ L EA+
Sbjct: 199 ALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKV 258
Query: 126 G--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
G Y K G M A+R+F M ++N +SW+A++ G+A G+ + +
Sbjct: 259 GDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLF 318
Query: 172 DRMT---------------------------------------EKNSVTWVAMIAGYGKC 192
RMT E + ++ Y KC
Sbjct: 319 CRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKC 378
Query: 193 GEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
G +A KVF I +PD W+A+ C Q G ++ A E++K MR V ++ + +
Sbjct: 379 GLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLV 438
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
SA T LGD+ + V + + N V NAL+ M+ K G + R F N+D+I
Sbjct: 439 SAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLI 498
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELM 372
S++++++ F D+ L +F +M EG PN TFI +L +CS V+ G KQ
Sbjct: 499 SWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG-KQVHAQ 557
Query: 373 TRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
+ T +VD+ ++ LE A ++
Sbjct: 558 IVKNSLDGNDFVGTALVDMYAKNRFLEDAETIF 590
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 149/291 (51%), Gaps = 12/291 (4%)
Query: 138 RLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCG 193
R D ++ + +S M+ A+ G++ K + ++ + +S W +++ Y KCG
Sbjct: 118 RGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG 177
Query: 194 EVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS 253
A KVF EI E D W A+ +V GY A+ ++ MR+E V +E A+
Sbjct: 178 SANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALK 237
Query: 254 ACTQLGDVEMA-AILAKHVDEGCCDRTN-YVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
AC+ D+E + A+ + G D ++ +V +AL+ +++KCG + LA R F + ++
Sbjct: 238 ACSMCLDLEFGKQVHAEAIKVG--DFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNA 295
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S+++++ FA G +++ L++F +M I ++ T VL C++ G + G L
Sbjct: 296 VSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSL 355
Query: 372 MTRVFGIKPLTEHLT-CMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
R+ G + L E ++ C+VD+ + G A + + +D D +W A++
Sbjct: 356 AIRI-GCE-LDEFISCCLVDMYSKCGLAGDALKVFVRIED-PDVVSWSAII 403
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 40/279 (14%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
KQVH+ ++K +D + L+ + L A +F+++ K + F WT ++
Sbjct: 552 KQVHAQIVKNSLDGND---FVGTALVDMYA-KNRFLEDAETIFNRLIK-RDLFAWTVIVA 606
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----------------- 119
+ +++ + +M R GV + FT +S L+ C+R+ +L
Sbjct: 607 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 666
Query: 120 ----LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN----MKAAKEFY 171
A++ Y K G ++DA+ +FD + R+ +SW+ ++ GY+ G +KA +
Sbjct: 667 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 726
Query: 172 DRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISE-----PDASCWAAMTVCYVQNGYA 226
D T + VT++ +++ G + E KK F+ +S+ P +A M + G
Sbjct: 727 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 786
Query: 227 KAAIEMYKVMR-QENVRISEVAMVGAISACTQLGDVEMA 264
+ M+ NV I E + AC G++E
Sbjct: 787 HEVESFIEEMKLTSNVLIWETVL----GACKMHGNIEFG 821
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
G + C GD+ + V + + +++ N+L+++++KCG + A + F I +
Sbjct: 133 GMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER 192
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
DV+S++++IT F G A+++F +MR EG+E N+ T+ L ACS +E G +
Sbjct: 193 DVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVH 252
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
+V L + +VDL + G++ A + + +A +W ALL
Sbjct: 253 AEAIKVGDFSDLFVG-SALVDLYAKCGEMVLAERVFLCMPKQ-NAVSWNALLNG 304
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 239/440 (54%), Gaps = 11/440 (2%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
N+ A ++F+++ K K W++LI + + + ++++L+ +M+ G++ SVL
Sbjct: 238 NVEEACKLFNEM-KQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVL 296
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+AC+R L VI G GL+ E V +A++ Y++C + A++
Sbjct: 297 SACSR----LLVVITGKLVHGLVVKVG------IETYVNLQNALIHMYSSCEEVVTAQKL 346
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+ + ++W +MI+GY KCGE+ +A+ +FD + + D W+AM Y Q +
Sbjct: 347 FSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETL 406
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+++ M+ E + E +V ISACT L ++ + ++ + + LI+M+
Sbjct: 407 VLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMY 466
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
K G ++ A F ++ K V +++++I A +G ++L F +M+ G+ PN++TF+
Sbjct: 467 MKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFV 526
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
VL AC H GLV++G + F M + I P +H CMVDLLGR+G L++A LI
Sbjct: 527 AVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPM 586
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D TWGALLGACK + + E GE R L+EL P+ G + LL+NIYAS G W D V
Sbjct: 587 APDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEV 646
Query: 471 KMMISETEKKKSPGCSWISS 490
+ M+ + K+PGCS I +
Sbjct: 647 RGMMRQHGVVKTPGCSMIEA 666
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 221/462 (47%), Gaps = 60/462 (12%)
Query: 15 QLKQVHSYLLKTLTKPHDQYHYYAQFLIRL-LQLPGDNLSYARQVFDQIPKCKTQFLWTS 73
+KQ + L + + + + A L++ +LP N++ + Q+F I F+ +
Sbjct: 38 NIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIEN-PNGFICNT 96
Query: 74 LIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA-RVPS-------------- 118
+++ ++ ++I +Y M V +T+ + +C+ R+
Sbjct: 97 MMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVG 156
Query: 119 ------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
+ +I Y G + DA+++FD + +++SW++M+AGY GN++ AK+ YD
Sbjct: 157 FDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYD 216
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
RM E+N + +MI +GK G V EA K+F+E+ + D W+A+ CY QN + A+ +
Sbjct: 217 RMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALIL 276
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS- 291
+K M + + EV ++ +SAC++L V ++ V + + + NALIHM+S
Sbjct: 277 FKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSS 336
Query: 292 ------------------------------KCGYLDLAWREFSRIKNKDVISYSSMITAF 321
KCG ++ A F + +KD +S+S+MI+ +
Sbjct: 337 CEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGY 396
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
A + E L +F +M+ EG +P++ + V++AC+H ++ G K R G+K
Sbjct: 397 AQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQG-KWIHAYIRKNGLKIN 455
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG--TWGALL 421
T ++++ + G +E A + +K + G TW AL+
Sbjct: 456 IILGTTLINMYMKLGCVEDALEV---FKGLEEKGVSTWNALI 494
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 139/313 (44%), Gaps = 54/313 (17%)
Query: 184 AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
+I Y CG + +A+KVFD S D W +M YV G + A ++Y M + NV
Sbjct: 166 TLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNV-- 223
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
SN++I + K G ++ A + F
Sbjct: 224 -------------------------------------IASNSMIVLFGKKGNVEEACKLF 246
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ +K KD++S+S++I+ + + +EAL +F +M GI ++V + VL+ACS +V
Sbjct: 247 NEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVI 306
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC--DAGTWGALL 421
G L+ +V GI+ ++ + ++ A L + + C D +W +++
Sbjct: 307 TGKLVHGLVVKV-GIETYVNLQNALIHMYSSCEEVVTAQKL---FSESCCLDQISWNSMI 362
Query: 422 GACKVHVNAELGEI-AARHLLELGPEKTGNS-ALLANIYASMGKWKDSEIV--KMMISET 477
+ GEI AR L + P+K S + + + YA ++ ++ ++ +M I T
Sbjct: 363 SG-----YVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGT 417
Query: 478 EKKKSPGCSWISS 490
+ ++ S IS+
Sbjct: 418 KPDETILVSVISA 430
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 257/500 (51%), Gaps = 65/500 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L ARQ+F+++ + W ++I ++V + ++ L+ +M+ G+++ G +S L
Sbjct: 479 LEDARQIFERMCD-RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537
Query: 112 ACARVPSLLE-------AVICG--------------YTKIGLMDDAQRLFDSMAERNVIS 150
AC V L + +V CG Y+K G++ DA+++F S+ E +V+S
Sbjct: 538 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 597
Query: 151 WSAMVAGYANCGNMKAA----KEFYDRMTEKNSVTWVAMIA------------------- 187
+A++AGY+ N++ A +E R + +T+ ++
Sbjct: 598 MNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Query: 188 --GYGKCGE---------------VREAKKVFDEISEPDA-SCWAAMTVCYVQNGYAKAA 229
G+ GE + EA +F E+S P + W M + QNG+ + A
Sbjct: 657 KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++ YK MR + V + V + C+ L + + + D SN LI M
Sbjct: 717 LKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDM 776
Query: 290 HSKCGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
++KCG + + + F ++ + +V+S++S+I +A +G +++AL +F MR I P+++T
Sbjct: 777 YAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEIT 836
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F+GVLTACSH G V DG K FE+M +GI+ +H+ CMVDLLGR G L++A I
Sbjct: 837 FLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQ 896
Query: 409 KDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSE 468
DA W +LLGAC++H + GEI+A L+EL P+ + LL+NIYAS G W+ +
Sbjct: 897 NLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKAN 956
Query: 469 IVKMMISETEKKKSPGCSWI 488
++ ++ + KK PG SWI
Sbjct: 957 ALRKVMRDRGVKKVPGYSWI 976
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 169/395 (42%), Gaps = 55/395 (13%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D +S AR+VF+ I T WT L +V +++L++ +M G F +V
Sbjct: 209 DRISDARRVFEWIVDPNT-VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV 267
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKE 169
+N Y ++G + DA+ LF M+ +V++W+ M++G+ G A E
Sbjct: 268 INT--------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 170 FYDRMTEK---------------------------------------NSVTWVAMIAGYG 190
++ M + N ++++ Y
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
KC ++ A KVF+ + E + W AM Y NG + +E++ M+ I +
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 251 AISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKD 310
+S C D+EM + + + + +V NAL+ M++KCG L+ A + F R+ ++D
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
++++++I ++ EA D+F +M GI + L AC+H + G KQ
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVH 552
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI 405
++ G+ + ++D+ + G ++ A +
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 587
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 151/347 (43%), Gaps = 63/347 (18%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-------LEAV 123
W +I H +I + M + V ++ T SVL+A V +L EA+
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 124 ICG--------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG------- 162
G Y+K M+ A ++F+++ E+N + W+AM+ GYA+ G
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVME 414
Query: 163 ---NMKAAKEFYDRMT-----------------------------EKNSVTWVAMIAGYG 190
+MK++ D T KN A++ Y
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVG 250
KCG + +A+++F+ + + D W + YVQ+ A +++K M + +
Sbjct: 475 KCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAS 534
Query: 251 AISACTQL-GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+ ACT + G + + V G DR + ++LI M+SKCG + A + FS +
Sbjct: 535 TLKACTHVHGLYQGKQVHCLSVKCGL-DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
V+S +++I ++ + +EA+ +F +M G+ P+++TF ++ AC
Sbjct: 594 SVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 113/515 (21%), Positives = 211/515 (40%), Gaps = 127/515 (24%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ--LPGDNLSYARQVFDQIPKCKTQFLWTSL 74
++++ ++L + HDQ H RLL+ L L +R+VFD++P Q L +L
Sbjct: 31 RRIYGHVLPS----HDQIHQ------RLLEICLGQCKLFKSRKVFDEMP----QRLALAL 76
Query: 75 IRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN---ACARVP------SLLE---- 121
+H+ +S++L G+ + G +++++ CA+V LE
Sbjct: 77 RIGKAVHS---KSLIL-------GIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVT 126
Query: 122 ---AVICGYTKIGLMDDAQRLFDSMAER----NVISWSAMVAGYANCGNMKAAKEFYDRM 174
+++ Y+ IG R F S+ E N ++S +++ A N++ ++ + M
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM 186
Query: 175 T----EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
E+NS A++ Y KC + +A++VF+ I +P+ CW + YV+ G + A+
Sbjct: 187 IKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+++ MR E R +A V I+ +LG ++ A +L
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL----------------------- 283
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
F + + DV++++ MI+ G A++ F MR ++ + T
Sbjct: 284 ------------FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 351 GVLTACS-----------HGGLVEDG-----------------CKQFELMTRVFGIKPLT 382
VL+A H ++ G C++ E +VF + L
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF--EALE 389
Query: 383 EH----LTCMVDLLGRSGQLEKAHSLIMDYKDF---CDAGTWGALLGACKVHVNAELGEI 435
E M+ +G+ K L MD K D T+ +LL C + E+G
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 436 AARHLLELGPEKT---GNSALLANIYASMGKWKDS 467
+++ K GN+ L ++YA G +D+
Sbjct: 450 FHSIIIKKKLAKNLFVGNA--LVDMYAKCGALEDA 482
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 151/494 (30%), Positives = 253/494 (51%), Gaps = 24/494 (4%)
Query: 6 LVPRSKTFNQLKQVHSY-----LLKTLTKPHDQYHYYAQFLIRLLQLPGDNLS---YARQ 57
L+ + KT NQL QVH+ LL Q + + + P + S YA
Sbjct: 33 LIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFSLLHYAVS 92
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA--R 115
FD I T F + +IR H LH+ ++ + +M R V ++ L ACA R
Sbjct: 93 TFDNIQNPST-FCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKACAHLR 151
Query: 116 VPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMT 175
V SL + + K G + D VI+ V +C N A + +D +
Sbjct: 152 VLSLAQCLHSQVFKFGFVSDLY----------VINSLIHVYSLFDCLNY--ACQVFDESS 199
Query: 176 EKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKV 235
+++ V++ A++ G+ K GE +A+++FD + D+ W ++ Y Q Y AI ++ +
Sbjct: 200 DRDVVSYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDL 259
Query: 236 MRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGY 295
M + +A+V A+SAC QLG++E + ++ + +++S L+ ++K G
Sbjct: 260 MMGLKLEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGC 319
Query: 296 LDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
+D A + F +K +I++++M+ A HG S L+ F +M GI+P+ ++F+GVL
Sbjct: 320 IDTAIKVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVG 379
Query: 356 CSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
CSHGGLV++ K F+ M ++G++ +H CM DLL R+G +++A L D
Sbjct: 380 CSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIF 439
Query: 416 TWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD-SEIVKMMI 474
W LLG C++H N E+ E AA+ ++EL PE G ++LAN+YA+ +W+D +I + M
Sbjct: 440 VWSGLLGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMS 499
Query: 475 SETEKKKSPGCSWI 488
S KK+ G S I
Sbjct: 500 SNRAVKKNAGRSSI 513
>gi|359486281|ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g45350, chloroplastic-like [Vitis vinifera]
Length = 704
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 234/438 (53%), Gaps = 18/438 (4%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH-RLGVLTSGFTFSSVL 110
L RQ+FD++ K K + S+I +V H + + L+ M +L S ++S++
Sbjct: 167 LGIVRQLFDRMMK-KDSVSFNSMIDGYVKHGMVKSAWELFDVMPMEQKILIS---WNSMI 222
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
+ AR L+ A LF+ M ++++ISW++M+ G CG M+
Sbjct: 223 SEYARSEERLKV-------------AWELFEEMPKKDLISWNSMINGCVKCGKMENDHHL 269
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++RM ++ V+ M+ G+ K GE+ A+ +F E+ E D AM YVQNGY ++
Sbjct: 270 FNRMPKRXVVSXANMVNGHAKLGEIDIARGLFVEMPEMDVISCNAMMARYVQNGYLMESL 329
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
+ + M + + + ++ +SA QLG + L ++++ + + ALI +
Sbjct: 330 KNFHDMLSKELFLDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDTY 389
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
+KCG +D A F I NK + ++++++ A HG + A ++F++M ++PN +TFI
Sbjct: 390 AKCGSIDNALSVFEDIDNKSIDHWNAILSGLAIHGLGEVAFELFMEMEKLFVKPNDITFI 449
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
GVL AC+H GLV++G FELM RV ++P +H CMVD+LG++G +E+ +
Sbjct: 450 GVLNACNHAGLVKEGLMCFELMKRVDKVEPKLQHYVCMVDILGQAGHVEETKKFVEKMSI 509
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
+ W LL AC+ H N +GE A+HL+ + + LL+NIYA G W D +
Sbjct: 510 EPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNLSSYVLLSNIYAGFGIWNDVHRI 569
Query: 471 KMMISETEKKKSPGCSWI 488
+MM+ + + KK PGCS I
Sbjct: 570 RMMMKQRDLKKIPGCSQI 587
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 184/401 (45%), Gaps = 38/401 (9%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L +R + K F+W ++I++ R+ +++ M GV F+FS VL
Sbjct: 65 LFMSRHFGRKYRKQDNSFIWNAIIKSFSHKEDPREVFVIFNLMLESGVCVDKFSFSLVLK 124
Query: 112 ACARVPSLLEAV----ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
AC+R+ + E + + G +IG +V + ++ Y CG +
Sbjct: 125 ACSRLGLIKEGMQIHGLLGKMEIG--------------SDVFLQNCLMCLYLRCGCLGIV 170
Query: 168 KEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFD--EISEPDASCWAAMTVCYVQN-G 224
++ +DRM +K+SV++ +MI GY K G V+ A ++FD + + W +M Y ++
Sbjct: 171 RQLFDRMMKKDSVSFNSMIDGYVKHGMVKSAWELFDVMPMEQKILISWNSMISEYARSEE 230
Query: 225 YAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSN 284
K A E+++ M ++++ ++ I+ C + G +E L + + VS
Sbjct: 231 RLKVAWELFEEMPKKDL----ISWNSMINGCVKCGKMENDHHLFNRM-----PKRXVVSX 281
Query: 285 A-LIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
A +++ H+K G +D+A F + DVIS ++M+ + +G E+L F M ++ +
Sbjct: 282 ANMVNGHAKLGEIDIARGLFVEMPEMDVISCNAMMARYVQNGYLMESLKNFHDMLSKELF 341
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL-TCMVDLLGRSGQLEKAH 402
+ T + L+A + G ++G G L+E L ++D + G ++ A
Sbjct: 342 LDNATLLITLSAIAQLGHFDEGV-ALHCYIEDNGFS-LSEKLGVALIDTYAKCGSIDNAL 399
Query: 403 SLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLEL 443
S+ D D W A+L +H LGE+A +E+
Sbjct: 400 SVFEDI-DNKSIDHWNAILSGLAIH---GLGEVAFELFMEM 436
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 264/539 (48%), Gaps = 68/539 (12%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
K+ LK +H+++LK+ + + ++ LI + ++ AR++FD++P +
Sbjct: 15 KSLTTLKSLHTHILKSGS----LFSFFGHKLIDG-YIKCSVITEARKLFDEMPN-RHIVT 68
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE-------AV 123
W S+I +HV +++I LY+ M GVL +TFS++ A + + E AV
Sbjct: 69 WNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAV 128
Query: 124 ICG---------------YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
+ G Y K G M DA+ +FD + +++V+ ++A++ GY G A
Sbjct: 129 VLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEAL 188
Query: 169 EFYDRMT---------------------------------------EKNSVTWVAMIAGY 189
E ++ M E + +++ Y
Sbjct: 189 EVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMY 248
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
KC V ++ KVF+ ++ W + V VQNG + A+ M++ M + ++ + +
Sbjct: 249 SKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLS 308
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
+ AC+ L +E + + D +V ALIH++ KCG ++ A F +
Sbjct: 309 SILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTEL 368
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
D++S ++MI A+A +G EAL++F +++ G+EPN VTFI +L AC++ GLVE+GC+ F
Sbjct: 369 DIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIF 428
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
L+ I+ +H TCM+DLLGR+ + E+A LI + K+ D W LL ACK+H
Sbjct: 429 SLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKN-PDVIQWRTLLNACKIHGE 487
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
E+ E + +L+ P G LL NIYAS GKW + +K + KK+P SW+
Sbjct: 488 VEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWV 546
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 17/261 (6%)
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV---AMIAGYGKCGEVREAKKVFDEISE 207
+++++A N ++ K + + + S+ +I GY KC + EA+K+FDE+
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 208 PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE----- 262
W +M +V G K AIE+Y M E V A +++G
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 263 --MAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITA 320
+A +L V +G +V+ ++ M++K G + A F R+ +KDV+ ++++I
Sbjct: 124 HGLAVVLGFEVSDG------FVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVG 177
Query: 321 FADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKP 380
+ HG EAL++F M I+PN+ T VL +C + G + +G K + +G++
Sbjct: 178 YNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNG-KLIHGLVVKYGLES 236
Query: 381 LTEHLTCMVDLLGRSGQLEKA 401
+ T ++ + + +E +
Sbjct: 237 VVASQTSLLTMYSKCNMVEDS 257
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 199/353 (56%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I GY K G + A+ +FD M ER++ +W++M++GY G+M+AA+ +D+M ++ V+
Sbjct: 229 SMIDGYVKNGELGLAREIFDEMYERDIFTWNSMISGYVGVGDMEAARGLFDKMPSRDVVS 288
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W MI G+ + +V A K FDE+ + W M Y++ + + +M +
Sbjct: 289 WNCMIDGFARIKDVSMAAKFFDEMPLRNVVSWNVMLALYLRCKKYSDCLRFFDMMVGGDF 348
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
E ++V ++AC +L ++ + ++ + +S AL+ M++KCG +DLA
Sbjct: 349 VPDEASLVSVLTACAELKMLDQGKWVHSYMKDNGIKPDMLLSTALLTMYAKCGAMDLARE 408
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F ++ K V+S++SMI + HG +AL+MF +M G PN TF+ VL+ACSH G+
Sbjct: 409 VFDKMPEKSVVSWNSMIIGYGIHGHGDKALEMFREMEKGGPMPNDATFMSVLSACSHSGM 468
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V +G F+LM R + I+P EH C+VDLLG++G E + L + WG LL
Sbjct: 469 VWNGWWYFDLMHRKYRIQPKPEHYGCLVDLLGQAGLKEPSEDLTRKTHTEVEPTLWGDLL 528
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
AC+ H +E GEI A+ L++L P LL+N Y + G+W D E ++M +
Sbjct: 529 SACRAHCISEPGEILAKQLIKLFPNHVVPYLLLSNTYVAEGRWDDVENLRMTL 581
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 34/251 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++S A + FD++P + W ++ ++ + + + M + + SVL
Sbjct: 301 DVSMAAKFFDEMP-LRNVVSWNVMLALYLRCKKYSDCLRFFDMMVGGDFVPDEASLVSVL 359
Query: 111 NACARV-------------------PSLL--EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
ACA + P +L A++ Y K G MD A+ +FD M E++V+
Sbjct: 360 TACAELKMLDQGKWVHSYMKDNGIKPDMLLSTALLTMYAKCGAMDLAREVFDKMPEKSVV 419
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
SW++M+ GY G+ A E + M + N T++++++ G V FD +
Sbjct: 420 SWNSMIIGYGIHGHGDKALEMFREMEKGGPMPNDATFMSVLSACSHSGMVWNGWWYFDLM 479
Query: 206 S-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
+P + + Q G + + ++ R+ + + +SAC
Sbjct: 480 HRKYRIQPKPEHYGCLVDLLGQAGLKEPSEDL---TRKTHTEVEPTLWGDLLSACRAHCI 536
Query: 261 VEMAAILAKHV 271
E ILAK +
Sbjct: 537 SEPGEILAKQL 547
>gi|6691205|gb|AAF24543.1|AC007508_6 F1K23.11 [Arabidopsis thaliana]
Length = 841
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 152/477 (31%), Positives = 253/477 (53%), Gaps = 16/477 (3%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H+ ++KT +P + + LI L L LSYARQVFD++PK T + +I
Sbjct: 375 KKIHADIIKTGFQP--DLNISIKLLI--LHLKCGCLSYARQVFDELPK-PTLSAYNYMIS 429
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--LLEAVICGYTKIGLMD 134
++ H ++ +LL +M G G+T S VL A S +L +C
Sbjct: 430 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVH----- 484
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
R+ E + + +A+V Y G +++A+ ++ M ++N V +MI+GY G
Sbjct: 485 --ARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 542
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNG-YAKAAIEMYKVMRQENVRISEVAMVGAIS 253
V +A+++F+ D + AM + ++G AK +++MY M++ + I
Sbjct: 543 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 602
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
AC+ L E+ + + + + ++L+ M++KCG ++ A R F +++ K+V S
Sbjct: 603 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 662
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++SMI + +G +EAL++F +M+ IEPN VTF+G L+ACSH GLV+ G + FE M
Sbjct: 663 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 722
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
R + +KP EH C+VDL+GR+G L KA + D+ W ALL +C +H N EL
Sbjct: 723 RDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 782
Query: 434 EIAARHLLELGPEKTGNSAL-LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
IAA L +L +K + L L+N+YAS KW + ++ ++ K+ G SW S
Sbjct: 783 SIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 839
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 200/337 (59%), Gaps = 9/337 (2%)
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
Y CG + A++ +D M KN + W +M++GY GE+ +A+++F+ D W AM
Sbjct: 2 YCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAMI 61
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
YVQ + A+ +++ M+ + V+ + +V ++ C Q+G +E + ++DE
Sbjct: 62 NGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGIP 121
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
V +LI M+SKCG ++ A R F ++ KD +++S+I A +GK+ +AL++F KM
Sbjct: 122 VDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELFSKM 181
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ P++VTFIGVL+ACSHGGLVE+G + F MT ++ I+P EH C++DLLGR+GQ
Sbjct: 182 KQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAGQ 241
Query: 398 LEKAHSLIMDYKDFCDAGT------WGALLGACKVHVNAELGEIAARHLLELGPEKTGNS 451
L++A LI K +A +G+LL AC+++ N ++GE A L+++ +
Sbjct: 242 LDEAEELI---KKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRDSSVH 298
Query: 452 ALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
LLANIYAS G+W D V+ + + KK PGCS I
Sbjct: 299 TLLANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSI 335
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 135/289 (46%), Gaps = 38/289 (13%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR++F++ P K LWT++I +V HF +++ L+ +M V F ++L
Sbjct: 39 LDKARELFERSP-VKDVVLWTAMINGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLT 97
Query: 112 ACARVPSL----------------LEAVICG-----YTKIGLMDDAQRLFDSMAERNVIS 150
CA++ +L ++AV+ Y+K G ++ A R+F + E++ +
Sbjct: 98 GCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTAT 157
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
W++++ G A G A E + +M + + VT++ +++ G V E ++ F+ ++
Sbjct: 158 WTSIICGLAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMT 217
Query: 207 -----EPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQLGD 260
EP + + + G A E+ K + N I V + G+ +SAC +
Sbjct: 218 SIYNIEPKLEHYGCLIDLLGRAGQLDEAEELIKKIVNANNEII-VPLYGSLLSACRIYKN 276
Query: 261 VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
V+M +A+ + + R + V L ++++ G W + +R++ +
Sbjct: 277 VQMGERVAEQLVK-IESRDSSVHTLLANIYASAG----RWVDVNRVRRE 320
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 39/180 (21%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN--------------------- 160
+++ GY G +D A+ LF+ ++V+ W+AM+ GY
Sbjct: 28 SMVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEMQIQRVKP 87
Query: 161 -----------CGNMKAAKE---FYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVF 202
C M A ++ + + EK ++V ++I Y KCG + +A ++F
Sbjct: 88 DKFVLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALRIF 147
Query: 203 DEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+ E D + W ++ NG A+E++ M+Q EV +G +SAC+ G VE
Sbjct: 148 CGLREKDTATWTSIICGLAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGLVE 207
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 79/174 (45%), Gaps = 35/174 (20%)
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGK---------------------- 326
M+ KCG L +A + F + +K+VI ++SM++ + ++G+
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 327 ---------SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFG 377
EA+ +F +M+ + ++P++ + +LT C+ G +E G + G
Sbjct: 61 INGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEK-G 119
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAE 431
I T ++++ + G +EKA + ++ D TW +++ C + +N +
Sbjct: 120 IPVDAVVGTSLIEMYSKCGCIEKALRIFCGLREK-DTATWTSII--CGLAMNGK 170
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 230/418 (55%), Gaps = 29/418 (6%)
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS 150
+A+ HRL +LT +F+ +L++ A S +C + L+ A +
Sbjct: 76 FARAHRLRLLTP-LSFTFLLSSPA-AASHAPFALCSHAL--LVKSGH-----FASGDPFL 126
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDA 210
SA+V+ YA + A+ +D M +++ + A+++ Y +CG V A+K+F E++E +
Sbjct: 127 GSALVSFYAKSRLLDEARRVFDEMPRRDTAVYNALLSAYARCGLVDAAEKLFGEMTERNV 186
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQ-ENVRISEVAMVGAISACTQLGDVEMAAILAK 269
W AM Y QNG +AA+E + M + V+ +E+ + + AC +G +E+ + +
Sbjct: 187 VSWTAMVSGYAQNGRHEAAVETFLEMWEGAGVQPNELTVSSVLPACAAVGAMELGTKVEE 246
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQ 328
+ +V+NAL+ M++KCG + AW+ F I ++ D+ S+++MI AFA HG
Sbjct: 247 YARGKGHLGNVFVTNALLEMYAKCGSIQRAWQVFQGIGHRRDLCSWNTMIMAFAVHGLWM 306
Query: 329 EALDMFLKMRNE------------------GIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
EAL +F K+R G++P+ +TF+GV+ AC+HGGLV++G F
Sbjct: 307 EALALFHKLRVRISCSNSLVYFFSIPTHMTGVKPDGITFVGVILACTHGGLVDEGKLIFN 366
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNA 430
M F I P EH CMVDLLGR+G L++A+S+I+ DA WGALLGAC H N
Sbjct: 367 SMEADFSINPRIEHYGCMVDLLGRAGLLKEAYSMIISMPAEPDAVIWGALLGACSFHGNI 426
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL E A L+ L P+ T N +L+NIYAS GKW V ++ E + KKS G S+I
Sbjct: 427 ELAETAVDKLMYLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFI 484
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 41/217 (18%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM---------------- 94
++ A QVF I + W ++I +H + +++ L+ K+
Sbjct: 272 SIQRAWQVFQGIGHRRDLCSWNTMIMAFAVHGLWMEALALFHKLRVRISCSNSLVYFFSI 331
Query: 95 --HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-- 150
H GV G TF V+ AC T GL+D+ + +F+SM I+
Sbjct: 332 PTHMTGVKPDGITFVGVILAC--------------THGGLVDEGKLIFNSMEADFSINPR 377
Query: 151 ---WSAMVAGYANCGNMKAAKEFYDRM-TEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
+ MV G +K A M E ++V W A++ G + A+ D++
Sbjct: 378 IEHYGCMVDLLGRAGLLKEAYSMIISMPAEPDAVIWGALLGACSFHGNIELAETAVDKLM 437
Query: 207 --EP-DASCWAAMTVCYVQNGYAKAAIEMYKVMRQEN 240
EP + + ++ Y +G +++K++++++
Sbjct: 438 YLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKD 474
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 260/534 (48%), Gaps = 67/534 (12%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K +H +L K K D + LI L G ++ A +VF + PK + LWTS+I
Sbjct: 125 KMIHGFLKK---KKIDNDMFVGSALIELYSKCG-QMNDAVKVFTEYPK-QDVVLWTSIIT 179
Query: 77 NHVLHAHFRQSILLYAKMHRL-GVLTSGFTFSSVLNACARVPS----------------- 118
+ + ++ +++M L V T S +ACA++
Sbjct: 180 GYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFD 239
Query: 119 ----LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
L +++ Y K G + A LF M +++ISWS+MVA YA+ G A ++ M
Sbjct: 240 TKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEM 299
Query: 175 TEK----NSVTWV-----------------------------------AMIAGYGKCGEV 195
+K N VT + A++ Y KC
Sbjct: 300 IDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSP 359
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISAC 255
+ A +F+ + + D WA + Y + G A ++ ++ M R +A+V ++A
Sbjct: 360 KNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAAS 419
Query: 256 TQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYS 315
++LG V+ A L V + D ++ +LI +++KC +D A + F ++ KDV+++S
Sbjct: 420 SELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWS 479
Query: 316 SMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
S+I A+ HG+ +EAL +F +M N ++PN VTF+ +L+ACSH GL+E+G K F +M
Sbjct: 480 SIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVN 539
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
+ + P TEH MVDLLGR G+L+KA +I + WGALLGAC++H N ++GE
Sbjct: 540 EYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGE 599
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+AA +L L P G LL+NIY W D+ ++ +I E KK G S +
Sbjct: 600 LAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMV 653
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 212/482 (43%), Gaps = 75/482 (15%)
Query: 16 LKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLI 75
+ Q+HS LK + HD + + +L +L +A ++F++ P CKT +LW +L+
Sbjct: 20 IPQLHSQCLK-VGLAHDSFVVTK---LNVLYARYASLCHAHKLFEETP-CKTVYLWNALL 74
Query: 76 RNHVLHAHFRQSILLYAKMHRLGVL---TSGFTFSSVLNACARVPSLL------------ 120
R++ L + +++ L+ +M+ + +T S L +C+ + L
Sbjct: 75 RSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKK 134
Query: 121 ---------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFY 171
A+I Y+K G M+DA ++F +++V+ W++++ GY G+ + A F+
Sbjct: 135 KIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFF 194
Query: 172 DRMT--EKNSVTWVAMIAG--------------------------------------YGK 191
RM E+ S V +++ YGK
Sbjct: 195 SRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGK 254
Query: 192 CGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGA 251
G +R A +F E+ D W++M CY NG A+ ++ M + + ++ V ++ A
Sbjct: 255 TGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISA 314
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDV 311
+ AC ++E + K + VS AL+ M+ KC A F+R+ KDV
Sbjct: 315 LRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDV 374
Query: 312 ISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFEL 371
+S++ + + +A+ G + ++L +F M + G P+ + + +L A S G+V+
Sbjct: 375 VSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAF 434
Query: 372 MTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGACKVHVN 429
+++ G +++L + ++ A+ + M KD TW +++ A H
Sbjct: 435 VSKS-GFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVV---TWSSIIAAYGFHGQ 490
Query: 430 AE 431
E
Sbjct: 491 GE 492
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 264/539 (48%), Gaps = 65/539 (12%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S+ + +QVH+ +++ +++ + A L+ + G + A +F+++P
Sbjct: 215 SRNIDAGRQVHAMVVRM---GYEKDVFTANALVDMYVKMG-RVDIASVIFEKMPDSDV-V 269
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-LEAVICG-- 126
W +LI VL+ H ++I L +M G++ + F SS+L ACA + L I G
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 329
Query: 127 ---------YTKIGL---------MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
Y +GL +DDA ++FD M+ R++I W+A+++G ++ G A
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 389
Query: 169 E-FYDRMTEK---NSVTWVA-----------------------------------MIAGY 189
FY E N T A +I Y
Sbjct: 390 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSY 449
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
KC + +A +VF+E S D +M Q + + AI+++ M ++ + +
Sbjct: 450 WKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
++AC L E + H+ + + NAL++ ++KCG ++ A FS + +
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
V+S+S+MI A HG + AL++F +M +EGI PN +T VL AC+H GLV++ + F
Sbjct: 570 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 629
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M +FGI EH +CM+DLLGR+G+L+ A L+ +A WGALLGA +VH +
Sbjct: 630 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKD 689
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
ELG++AA L L PEK+G LLAN YAS G W + V+ ++ ++ KK P SW+
Sbjct: 690 PELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWV 748
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 157/359 (43%), Gaps = 59/359 (16%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC- 113
AR+VFD+IP W+SL+ + + R +I + M GV + F VL
Sbjct: 56 ARRVFDEIPD-PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP 114
Query: 114 -----ARVPSLL------------EAVICGYTKIGLMDDAQRLFDSM-AERNVISWSAMV 155
A+V ++ A++ Y G MDDA+R+FD +ERN +SW+ ++
Sbjct: 115 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 174
Query: 156 AGYA---NCG--------------------------------NMKAAKEFYDRMT----E 176
+ Y CG N+ A ++ + + E
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 234
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
K+ T A++ Y K G V A +F+++ + D W A+ V NG+ AIE+ M
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ + + + + AC G ++ + + + D +Y+ L+ M++K +L
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
D A + F + ++D+I ++++I+ + G+ EA +F +R EG+ N+ T VL +
Sbjct: 355 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 172/377 (45%), Gaps = 53/377 (14%)
Query: 86 QSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAE 145
Q++L A +H +L SGF + SL +I Y+K A+R+FD + +
Sbjct: 18 QALLPGAHLHA-NLLKSGF-----------LASLRNHLISFYSKCRRPCCARRVFDEIPD 65
Query: 146 RNVISWSAMVAGYANCGNMKAAKEFYDRM------------------------------- 174
+SWS++V Y+N G ++A + + M
Sbjct: 66 PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVHAM 125
Query: 175 ---TEKNSVTWV--AMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKA 228
T S +V A++A YG G + +A++VFDE SE +A W + YV+N
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGD 185
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
AI+++ M ++ +E ++ACT +++ + V ++ + +NAL+
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVD 245
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+ K G +D+A F ++ + DV+S++++I+ +G A+++ L+M++ G+ PN
Sbjct: 246 MYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFM 305
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC-MVDLLGRSGQLEKAHSLIMD 407
+L AC+ G + G + M + +++ +VD+ ++ L+ A + D
Sbjct: 306 LSSILKACAGAGAFDLGRQIHGFMIKANADS--DDYIGVGLVDMYAKNHFLDDAMK-VFD 362
Query: 408 YKDFCDAGTWGALLGAC 424
+ D W AL+ C
Sbjct: 363 WMSHRDLILWNALISGC 379
>gi|345505224|gb|AEN99836.1| chlororespiratory reduction 4, partial [Lepidium virginicum]
Length = 594
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 239/474 (50%), Gaps = 25/474 (5%)
Query: 18 QVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRN 77
Q+H +L KT + Q + L L L +ARQ+FD++PK R+
Sbjct: 123 QIHGFLRKTGL----WSDLFLQNCLIALYLKCGCLGFARQIFDRMPK-----------RD 167
Query: 78 HVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGY--TKIGLMDD 135
V + + + + G++ S + + + GY T GL
Sbjct: 168 SVSYNPXXEGXV------KCGLIESARELFXLXXXEXKNXXSXXCMXSGYAQTSDGLXI- 220
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A +LF M E+++ISW++++ GY G + AK+ YD M ++ +TW MI GY K G V
Sbjct: 221 ASKLFSEMPEKDLISWNSIIDGYVKHGRXEDAKDLYDVMPRRDVITWATMIDGYVKLGFV 280
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMVGAISA 254
+AK + D I D + +M YVQN Y A+E++ M +E ++ E +V +SA
Sbjct: 281 HQAKTLLDXIPHRDVVAYNSMMAGYVQNKYHMEALELFGDMEKESHLSPDETTLVIVLSA 340
Query: 255 CTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISY 314
QLG + A + +V + + +LI M+SKCG + A F ++NK + +
Sbjct: 341 IAQLGRLSKAVDMYLYVVKKQFFLGGKLWVSLIDMYSKCGSIQHAMLVFEGLENKTIDHW 400
Query: 315 SSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR 374
+++I A HG+ A +M L++ I+P+ +TF GVL ACSH G V++G FELM R
Sbjct: 401 NAIIGGLAIHGRGGPAFNMLLQIERSSIKPDDITFTGVLNACSHSGFVKEGLLCFELMRR 460
Query: 375 VFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
I+P +H CMVD+L RSG +E A +LI + W L AC H E+GE
Sbjct: 461 KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEKMPIEPNDVIWRTFLTACSHHKEFEMGE 520
Query: 435 IAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ A+HL+ + LL+N+YAS G WKD V+ M+ E + K PGCS I
Sbjct: 521 LVAKHLILQADYNPSSYVLLSNMYASFGMWKDVRGVRTMMKERKIPKIPGCSSI 574
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 173/424 (40%), Gaps = 109/424 (25%)
Query: 54 YARQVFDQ-----IPKCKTQ--FLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTF 106
+AR VF++ P +T+ FLW +++++H R+++LL+ M GV F+
Sbjct: 46 FARCVFEEHYVYSFPYGETEDPFLWNAVMKSHSHGTDPRRALLLFCLMLENGVSVDKFSS 105
Query: 107 SSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKA 166
S VL AC+R+ G+ K G M L + ++ + ++A Y CG +
Sbjct: 106 SLVLKACSRL---------GFVKGG-MQIHGFLRKTGLWSDLFLQNCLIALYLKCGCLGF 155
Query: 167 AKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAK--------------------------- 199
A++ +DRM +++SV++ G KCG + A+
Sbjct: 156 ARQIFDRMPKRDSVSYNPXXEGXVKCGLIESARELFXLXXXEXKNXXSXXCMXSGYAQTS 215
Query: 200 -------KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAI 252
K+F E+ E D W ++ YV++G + A ++Y VM + +V + I
Sbjct: 216 DGLXIASKLFSEMPEKDLISWNSIIDGYVKHGRXEDAKDLYDVMPRRDV----ITWATMI 271
Query: 253 SACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVI 312
+LG V A L I ++DV+
Sbjct: 272 DGYVKLGFVHQAKTL-----------------------------------LDXIPHRDVV 296
Query: 313 SYSSMITAFADHGKSQEALDMFLKMRNEG-IEPNQVTFIGVLTACSHGGLVEDGC----- 366
+Y+SM+ + + EAL++F M E + P++ T + VL+A + G +
Sbjct: 297 AYNSMMAGYVQNKYHMEALELFGDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDMYLY 356
Query: 367 ---KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
KQF L +++ ++D+ + G ++ A L+ + + W A++G
Sbjct: 357 VVKKQFFLGGKLW---------VSLIDMYSKCGSIQHA-MLVFEGLENKTIDHWNAIIGG 406
Query: 424 CKVH 427
+H
Sbjct: 407 LAIH 410
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 204/367 (55%)
Query: 122 AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
++I G K+G + +A +LFD M ++ +SW+ ++ GY G M A ++ M E+N V+
Sbjct: 17 SMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKAFGLFESMPERNVVS 76
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W M++GY K G++ A+ +FD + + W + Y G AK AI ++ M + +
Sbjct: 77 WSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGL 136
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ + ++ +++C + G + + + ++ + VSNAL+ M++KCG +D A
Sbjct: 137 KPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALS 196
Query: 302 EFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGL 361
F+ + KD++S++ M+ A HG ++AL +F MR EG P++VT + VL AC H G
Sbjct: 197 VFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGF 256
Query: 362 VEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
V++G + F M R +GI P EH CMVDLLGR G+L++A+ L+ + WG LL
Sbjct: 257 VDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLL 316
Query: 422 GACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKK 481
GAC++H L E L +L P GN +LL+NI+AS G W V++ + +K
Sbjct: 317 GACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQK 376
Query: 482 SPGCSWI 488
G S I
Sbjct: 377 PSGASSI 383
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 134/316 (42%), Gaps = 33/316 (10%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
++ AR +FD++P K WT ++ + + + +I + +M G+ T S+L
Sbjct: 89 DMEMARMLFDRMP-VKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISIL 147
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAER-----NVISWSAMVAGYANCGNMK 165
+CA + GL+ +R+ S+ ER +V +A+V YA CG +
Sbjct: 148 ASCA--------------ESGLLGLGKRVHTSI-ERIRYKCSVNVSNALVDMYAKCGQVD 192
Query: 166 AAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVF----DEISEPDASCWAAMTVCYV 221
A ++ M++K+ V+W M+ G G +A ++F E PD A+ V
Sbjct: 193 RALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACV 252
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQLGDVEMAAILAKHVDEGCCDRTN 280
G+ I + M ++ + + G + + G ++ A L + + +
Sbjct: 253 HAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMP---VEPNV 309
Query: 281 YVSNALI---HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
+ L+ MH+ G + +++ D +YS + FA G ++ L+M
Sbjct: 310 VIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQM 369
Query: 338 RNEGIE-PNQVTFIGV 352
+N GI+ P+ + I V
Sbjct: 370 KNFGIQKPSGASSIEV 385
>gi|449433223|ref|XP_004134397.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
gi|449487596|ref|XP_004157705.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 675
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 159/538 (29%), Positives = 255/538 (47%), Gaps = 83/538 (15%)
Query: 30 PHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSIL 89
P Y + L+Q GD + A+ +FD +P + W S+I + + ++I
Sbjct: 104 PERDVFSYNTVIGGLMQC-GD-VDGAKDIFDLMP-FRDVVSWNSMIAGCIRNGLLEEAIQ 160
Query: 90 LYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--------------AVICGYTKIGLMDD 135
L+ M V++ ++N C ++ S E +I G + G +D+
Sbjct: 161 LFDGMPLKNVISWNLIIGGLVN-CGKLDSAGEYFGKMSRRDLVSWTIMISGLCRAGRLDE 219
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEV 195
A+ LF++M ++ W+AM+ GY G ++ A+E + M E+N +W ++ G+ V
Sbjct: 220 ARGLFNNMPTKDARVWNAMMVGYIENGKIEMAEELFGIMPERNFGSWNKLVNGFVGSQRV 279
Query: 196 REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR-----------IS 244
+A+K+F E+ + W + + Y++NG + + + N+ I
Sbjct: 280 DDARKLFMEMPDKCQKTWNNIVLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGIG 339
Query: 245 EVAMVGAISACTQLGDV-----------------EMAAILAKHVDEG-CCDRTNY----- 281
EV M I Q D E + + + G C D+ +
Sbjct: 340 EVGMAVEIFESMQYKDTTVWNATIFGLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILT 399
Query: 282 ----------------------------VSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
VSNA+I+M+++CG +D A+ EFS + ++DVIS
Sbjct: 400 ICSDLETLQLGRQTHALILKEGFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVIS 459
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++SMI FA HG ++AL+MF KMR IEPN +TFIGVL+ACSH GL++ G F M
Sbjct: 460 WNSMICGFAHHGNGEDALEMFEKMRLANIEPNHITFIGVLSACSHKGLIDKGRYYFNFMK 519
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD---FCDAGTWGALLGACKVHVNA 430
++PL EH TC+VDL GR G +++A S + + K WGALLGAC++H N
Sbjct: 520 NECSLRPLIEHYTCLVDLFGRFGLIDEALSFLAEMKAEEIEVPPSVWGALLGACRIHKNY 579
Query: 431 ELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
++G IA +LE P G +LA +Y GK +++E + + KK PGCSWI
Sbjct: 580 DVGVIAGEKVLEKEPHNAGVYLILAEMYLRNGKRENAEKIFARMKNNGVKKQPGCSWI 637
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 192/423 (45%), Gaps = 59/423 (13%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNA-- 112
A+++FD +P+ + W ++IR + L+ I L+ +M V F++++V+
Sbjct: 65 AQKLFDGMPQ-RNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDV----FSYNTVIGGLM 119
Query: 113 -CARVPSLLE--------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAG 157
C V + ++I G + GL+++A +LFD M +NVISW+ ++ G
Sbjct: 120 QCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLIIGG 179
Query: 158 YANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
NCG + +A E++ +M+ ++ V+W MI+G + G + EA+ +F+ + DA W AM
Sbjct: 180 LVNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRAGRLDEARGLFNNMPTKDARVWNAMM 239
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
V Y++NG + A E++ +M + N S +V ++ D A L + + C
Sbjct: 240 VGYIENGKIEMAEELFGIMPERNFG-SWNKLVNGFVGSQRVDD---ARKLFMEMPDKCQK 295
Query: 278 RTN-----YVSNALI-HMHS---------------------KCGYLDLAWREFSRIKNKD 310
N Y+ N L+ H+ G + +A F ++ KD
Sbjct: 296 TWNNIVLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFESMQYKD 355
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFE 370
+++ I ++ K +E L +F +M G ++ TF +LT CS ++ G +
Sbjct: 356 TTVWNATIFGLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHA 415
Query: 371 LMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG--TWGALLGACKVHV 428
L+ + G M+++ R G ++ A M++ D +W +++ H
Sbjct: 416 LILKE-GFNGFVAVSNAMINMYARCGNMDCA---FMEFSSMSDRDVISWNSMICGFAHHG 471
Query: 429 NAE 431
N E
Sbjct: 472 NGE 474
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 169/403 (41%), Gaps = 72/403 (17%)
Query: 79 VLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQR 138
+ + R S L RL + TF ++ LL + I + GL++ AQ+
Sbjct: 16 IFSLYLRNSCSLTTSTCRLQASHAPPTFPNL--------KLLNSEISNCMRNGLVEQAQK 67
Query: 139 LFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREA 198
LFD M +RN+++W+AM+ GY G + RM E++ ++ +I G +CG+V A
Sbjct: 68 LFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVIGGLMQCGDVDGA 127
Query: 199 KKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQL 258
K +FD + D W +M ++NG + AI+++ M +NV IS ++G +
Sbjct: 128 KDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNV-ISWNLIIGGL------ 180
Query: 259 GDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMI 318
CG LD A F ++ +D++S++ MI
Sbjct: 181 --------------------------------VNCGKLDSAGEYFGKMSRRDLVSWTIMI 208
Query: 319 TAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGI 378
+ G+ EA +F M + +G +E+G + E+ +FGI
Sbjct: 209 SGLCRAGRLDEARGLFNNMPTKDARVWNAMMVGY---------IENG--KIEMAEELFGI 257
Query: 379 KPLTEHLTC--MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA-------CKVHVN 429
P + +V+ S +++ A L M+ D C TW ++ A + H
Sbjct: 258 MPERNFGSWNKLVNGFVGSQRVDDARKLFMEMPDKCQK-TWNNIVLAYIRNGLVLQTHAL 316
Query: 430 AE---LGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
E G IA+ L +G G + I+ SM ++KD+ +
Sbjct: 317 LEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFESM-QYKDTTV 358
>gi|91805879|gb|ABE65668.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 520
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 152/477 (31%), Positives = 252/477 (52%), Gaps = 16/477 (3%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H+ ++KT +P + + LI L L LSYARQVFD++PK T + +I
Sbjct: 54 KKIHADIIKTGFQP--DLNISIKLLI--LHLKCGCLSYARQVFDELPK-PTLSAYNYMIS 108
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS--LLEAVICGYTKIGLMD 134
++ H ++ +LL +M G G+T S VL A S +L +C
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVH----- 163
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGE 194
R+ E + + +A+V Y G +++A+ ++ M ++N V +MI+GY G
Sbjct: 164 --ARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 221
Query: 195 VREAKKVFDEISEPDASCWAAMTVCYVQNG-YAKAAIEMYKVMRQENVRISEVAMVGAIS 253
V +A+++F+ D + AM + ++G AK +++MY M++ + I
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 254 ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVIS 313
AC L E+ + + + + ++L+ M++KCG ++ A R F +++ K+V S
Sbjct: 282 ACAVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 314 YSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMT 373
++SMI + +G +EAL++F +M+ IEPN VTF+G L+ACSH GLV+ G + FE M
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
Query: 374 RVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELG 433
R + +KP EH C+VDL+GR+G L KA + D+ W ALL +C +H N EL
Sbjct: 402 RDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Query: 434 EIAARHLLELGPEKTGNSAL-LANIYASMGKWKDSEIVKMMISETEKKKSPGCSWIS 489
IAA L +L +K + L L+N+YAS KW + ++ ++ K+ G SW S
Sbjct: 462 SIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 518
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 149/481 (30%), Positives = 244/481 (50%), Gaps = 65/481 (13%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV-------------- 116
W +++ +H + F + L+ +M + G L F + AC +
Sbjct: 81 WNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAI 140
Query: 117 -------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYAN--------- 160
P + A++ YT++G +++A ++F+ + +N + W M+ G+ N
Sbjct: 141 KLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFE 200
Query: 161 -----------------------CGNMKAAKE---FYDRMTEKNSVT-----WVAMIAGY 189
CGN+ A KE F+ +KN + +++ Y
Sbjct: 201 LFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMY 260
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
KCG + A K+F+EIS D W+A+ + +NG A +I M++ M ++V + V
Sbjct: 261 MKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFA 320
Query: 250 GAISACTQLGDVEMA-AILAKHVDEGC-CDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
+ AC+ LG ++ ++ + G D NY S I M++KCG + A+R F +I
Sbjct: 321 SIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTS--FIDMYAKCGCIVTAYRVFCQIP 378
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
K+V S+S+MI F HG EAL++F +MR+ PN VTF+ VL+ACSH G +E+G
Sbjct: 379 EKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWS 438
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
F+ M+R +GI P+ EH CMVDLLGR+G++++A S I + A WGALLGAC++H
Sbjct: 439 HFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIH 498
Query: 428 VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSW 487
AEL E A+ LL L +++G +L+NIYA +G W+ + ++ + E K G +
Sbjct: 499 RRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTS 558
Query: 488 I 488
I
Sbjct: 559 I 559
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 62/273 (22%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L A +VF+++P K +W +I+ H+ + L+++M R G F ++
Sbjct: 163 SLEEAHKVFEEVP-LKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLI 221
Query: 111 NACARVPS----------------------LLEAVICGYTKIGLMDDAQRLFDSMAERNV 148
AC V + L +++ Y K G +D A +LF+ ++ R+V
Sbjct: 222 QACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDV 281
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAG---------------- 188
+ WSA++AG+A G + + +M NSVT+ +++
Sbjct: 282 VVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGY 341
Query: 189 -------------------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
Y KCG + A +VF +I E + W+ M + +G A
Sbjct: 342 MIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEA 401
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVE 262
+ ++ MR N + V V +SAC+ G +E
Sbjct: 402 LNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIE 434
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 109/252 (43%), Gaps = 14/252 (5%)
Query: 179 SVTWVAMIAG-YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
S+ + MI G Y + G + A K F+ I+ + W + + +N ++++K M
Sbjct: 46 SLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRML 105
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
+E + +V A+ AC L + A + + + YV+ AL++++++ G L+
Sbjct: 106 KEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLE 165
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A + F + K+ + + MI + + ++F +MR G E + G++ AC
Sbjct: 166 EAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACG 225
Query: 358 H------GGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+ G C + + F ++ T +VD+ + G L+ A L + +
Sbjct: 226 NVYAGKEGKTFHGLCIKKNFIDSNFFLQ------TSLVDMYMKCGFLDFALKLFEEI-SY 278
Query: 412 CDAGTWGALLGA 423
D W A++
Sbjct: 279 RDVVVWSAIIAG 290
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 238/441 (53%), Gaps = 14/441 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG--FTFSS 108
NL +A+ +F Q+P F W ++I+ H+ + ++ + + L + + ++S
Sbjct: 60 NLYHAQLIFAQLPNPNV-FSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTS 118
Query: 109 VLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
++ ACA LEA+ G + + S + N+ +++V Y +A
Sbjct: 119 LIKACAG----LEAIADGLKVHAV------VIKSGLDNNIHLGTSLVDMYFKFREPASAG 168
Query: 169 EFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
+ +D M ++ V+W M++GY CG++ A++VFD++ E D W AM YVQNG
Sbjct: 169 QVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSD 228
Query: 229 AIEMYKVMRQ-ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALI 287
AIE++ M++ V +V +V +SAC +G ++ + + V Y+ NALI
Sbjct: 229 AIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALI 288
Query: 288 HMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQV 347
M++KCG ++ A R F ++ +DVIS+S+MI HG + EA + KM G++PN+V
Sbjct: 289 DMYAKCGTMEEARRIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEV 348
Query: 348 TFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMD 407
TF+G+L+ACSH GLV+ G + F M + + I P H C++DLL R+G+L++A LI
Sbjct: 349 TFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINS 408
Query: 408 YKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDS 467
+ WGALLG C++H + GE A+HLLEL E TG+ +A AS+G+ D+
Sbjct: 409 MPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDA 468
Query: 468 EIVKMMISETEKKKSPGCSWI 488
+ + K PGCS I
Sbjct: 469 ANCWLRMQHKGIIKDPGCSKI 489
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 236/491 (48%), Gaps = 61/491 (12%)
Query: 58 VFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR-- 115
VF ++P + WT++I V + ++++ ++ M V +TFSS L ACA
Sbjct: 125 VFKEMP-LRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183
Query: 116 -------------------VPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVA 156
V + + Y K G +D RLF+SM +R+V+SW+ ++
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243
Query: 157 GYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAG------------------------ 188
G + A + + RM E N T+ A+I+G
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVD 303
Query: 189 -----------YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
Y KC ++ A VF +S D W+ M Y Q G + A + MR
Sbjct: 304 SLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMR 363
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLD 297
+E R +E A +S C + +E L HV ++ V +ALI+M+SKCG +
Sbjct: 364 REGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIK 423
Query: 298 LAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
A + F + +++S+++MI +A+HG SQEA+D+F K+ G+ P+ VTFI VL ACS
Sbjct: 424 EASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACS 483
Query: 358 HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTW 417
H GLV+ G F +++V I P +H CM+DLL R+G+L A S+I D W
Sbjct: 484 HAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVW 543
Query: 418 GALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISET 477
LL AC++H + + G+ AA +L+L P LAN+YA+ GKWK++ V+ M+
Sbjct: 544 STLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSK 603
Query: 478 EKKKSPGCSWI 488
K PG SWI
Sbjct: 604 GVVKEPGWSWI 614
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 205/439 (46%), Gaps = 66/439 (15%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH-RLGVLTSGFTFSSV 109
+L+ ARQ+FD++ + + + WT++I +V + +++ L++KM G+ F S
Sbjct: 16 HLNNARQLFDKMLQ-RDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLA 74
Query: 110 LNACARVPSL---------------LEAVICG------YTKIGLMDDAQRLFDSMAERNV 148
L AC S+ + +V G Y KIG +D+ +F M RNV
Sbjct: 75 LKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNV 134
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRM---------------------------------- 174
+SW+A++AG G K A ++ M
Sbjct: 135 VSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQ 194
Query: 175 TEKNSVTWVAMIAG-----YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
T K T V+ +A Y KCG++ ++F+ +++ D W + + VQ G + A
Sbjct: 195 TLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENA 254
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHV-DEGCCDRTNYVSNALIH 288
++ ++ MR+ +V +E IS C LG +E L HV G D + V+N+++
Sbjct: 255 VKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLS-VANSIMA 313
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+SKC LDLA F + +D+IS+S+MI+ +A G +EA D MR EG PN+
Sbjct: 314 MYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFA 373
Query: 349 FIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDY 408
F VL+ C + ++E G KQ G++ T + ++++ + G +++A S I D
Sbjct: 374 FASVLSVCGNMAILEQG-KQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEA-SKIFDE 431
Query: 409 KDFCDAGTWGALLGACKVH 427
++ + +W A++ H
Sbjct: 432 AEYNNIVSWTAMINGYAEH 450
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 40/286 (13%)
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK-- 177
+ V+ K G +++A++LFD M +R+ ISW+ +++GY N N A + +M +
Sbjct: 4 INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63
Query: 178 -------------------------------------NSV-TWVAMIAGYGKCGEVREAK 199
NSV A++ Y K G+V E
Sbjct: 64 LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123
Query: 200 KVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLG 259
VF E+ + W A+ V+ GY K A+ + M + V A+ AC G
Sbjct: 124 IVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183
Query: 260 DVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+ + + ++V+N L M++KCG LD R F + +DV+S++++I
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+ G+ + A+ F +MR + PN+ TF V++ C+ G +E G
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWG 289
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A VF + + + W+++I + ++ + M R G + F F+SVL+
Sbjct: 321 LDLASTVFQGLSR-RDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLS 379
Query: 112 ACARVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVIS 150
C + L + A+I Y+K G + +A ++FD N++S
Sbjct: 380 VCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVS 439
Query: 151 WSAMVAGYANCGNMKAAKEFYDRMTE----KNSVTWVAMIAGYGKCGEVREAKKVFDEIS 206
W+AM+ GYA G + A + + ++ + +SVT++A++A G V F+ +S
Sbjct: 440 WTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLS 499
Query: 207 E-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
+ P + M + G A M + M + +V + AC GDV
Sbjct: 500 KVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQR---DDVVWSTLLRACRIHGDV 556
Query: 262 E 262
+
Sbjct: 557 D 557
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 191 KCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE-NVRISEVAMV 249
K G + A+++FD++ + D W + YV A+ ++ M E + + +
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
A+ AC V L + + + +V +AL+ M+ K G +D F + +
Sbjct: 73 LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLR 132
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+V+S++++I G ++EAL F M + + + TF L AC+ G + G ++
Sbjct: 133 NVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYG-REI 191
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
T G ++ + + + G+L+
Sbjct: 192 HCQTLKKGFTAVSFVANTLATMYNKCGKLD 221
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 145/480 (30%), Positives = 252/480 (52%), Gaps = 43/480 (8%)
Query: 13 FNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ--LPGDNLSYARQVFDQIPKCKTQFL 70
F ++KQ+H+ + + Y+ RLL+ + + YA +F++IP F+
Sbjct: 26 FQEVKQLHAQFVVS-----GLLGYHPLCARRLLEAYVTMSQIYYAFSIFERIPSPDV-FV 79
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEA--VICGYT 128
+ ++IR G+ FT++ VL AC+ + + E V C
Sbjct: 80 YNTMIR---------------------GLTMDNFTYTFVLKACSHLKAPFEGKQVHCQII 118
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAG 188
K G++ D S+++ Y N G++ A+ +E+N++ AMI+G
Sbjct: 119 KAGIVPDTH------------IHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMISG 166
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
Y G V +A+K+FD+++ DA+ W+A+ Y +NG A+ +++ M ++ +E A+
Sbjct: 167 YLTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAAL 226
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKN 308
V +SAC QLG + + ++D+ + ++ ALI M++K G ++ + F ++
Sbjct: 227 VSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKMAR 286
Query: 309 KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQ 368
+DV+++ MI+AFA HG + + +F +M +GI PN+V F+ +L+ACSH G VE+G +
Sbjct: 287 RDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEGRQY 346
Query: 369 FELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHV 428
F M FGIKP EH CMVDLLGR+G L A LI+ ++ WG+LLGAC+ H
Sbjct: 347 FSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRTHN 406
Query: 429 NAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ + G A +L+EL P L ++A+ G+ +++ ++ MI E E + G S+I
Sbjct: 407 DLKRGTWAFENLMELEPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTCGSSFI 466
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 243/494 (49%), Gaps = 61/494 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A ++FD++P+ + W ++I + + + ++ L +M G T S+L A A
Sbjct: 229 AYKMFDRMPE-RDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVA 287
Query: 115 RVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
V SL A++ Y+K G + A+ +FD M + V+SW++
Sbjct: 288 DVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNS 347
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVTWV-------------------------- 183
M+ GY G+ AA E + +M E +VT +
Sbjct: 348 MIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLE 407
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
++I+ Y KC V A ++F+ + W AM + Y QNG AI+ +
Sbjct: 408 LGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFC 467
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ +N++ MV I A +L + A + V C D+ +V+ AL+ M++KCG
Sbjct: 468 KMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCG 527
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ A + F + + V ++++MI + HG + AL++F KM+ E I+PN+VTF+ VL+
Sbjct: 528 AVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLS 587
Query: 355 ACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDA 414
ACSH GLVE+G + F M + +G++P +H MVDLLGR+ +L +A I
Sbjct: 588 ACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAI 647
Query: 415 GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMI 474
+GA+LGAC++H N ELGE AA + +L P+ G LLANIYA+ W V+ +
Sbjct: 648 SVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTM 707
Query: 475 SETEKKKSPGCSWI 488
+ +K+PG S +
Sbjct: 708 EKKGIQKTPGWSVV 721
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 129/259 (49%), Gaps = 8/259 (3%)
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSM---AERNVI-SWSAMVAGYANCGNMKAAKEF 170
++ L ++ GY + +DDA F M R V+ +++ ++ + +++ KE
Sbjct: 138 KIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEI 197
Query: 171 YDRMTEKNSVTWVAMIAG----YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
+ ++ + V + G Y KC V EA K+FD + E D CW + Y QNG+
Sbjct: 198 HCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFG 257
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
K A+E+ M++E R + +V + A +G + + + + + VS AL
Sbjct: 258 KTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTAL 317
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M+SKCG + A F R+ K V+S++SMI + +G A+++F KM +E +E
Sbjct: 318 VDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTN 377
Query: 347 VTFIGVLTACSHGGLVEDG 365
VT +G L AC+ G VE G
Sbjct: 378 VTVMGALHACADLGDVEQG 396
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 107/237 (45%), Gaps = 2/237 (0%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+++ + K G + EA +VF I + + M Y +N A+ + MR + VR
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPV 174
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
+ C D+ + + + +++M++KC ++ A++ F
Sbjct: 175 VYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFD 234
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
R+ +D++ ++++I+ +A +G + AL++ L+M+ EG P+ +T + +L A + G +
Sbjct: 235 RMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
G R G + T +VD+ + G + A LI D +W +++
Sbjct: 295 GRSIHGYSMRA-GFESFVNVSTALVDMYSKCGSVGTAR-LIFDRMTGKTVVSWNSMI 349
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 150/495 (30%), Positives = 247/495 (49%), Gaps = 28/495 (5%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL--PGDNLSYARQVF 59
T +L+ + + +LKQ+H + + H + L QL P D A++VF
Sbjct: 5 TFYFLLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVD----AQKVF 60
Query: 60 DQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL 119
+ I WT LI ++ + ++ +++ + G+ F ++AC L
Sbjct: 61 NHIQNPDI-VSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDL 119
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAER-----NVISWSAMVAGYANCGNMKAAKEFYDRM 174
R+ M R + I +A++ Y+ G ++ A + M
Sbjct: 120 SNG---------------RIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTM 164
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
K+ +W +++ G+ KC ++ A+++FDE+ ++ W AM YVQ +E+++
Sbjct: 165 EIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQ 224
Query: 235 VMRQENVRISEV-AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKC 293
MR E V +V +S C +G ++ + + +V++ D V+NAL+ M++K
Sbjct: 225 EMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKS 284
Query: 294 GYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVL 353
G L LA + F + +DV S+++MI+ A HGK AL+ F M G+ PN+VT + VL
Sbjct: 285 GALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVL 344
Query: 354 TACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCD 413
+ACSH GLV +G F+ M + GIKP +H CMVDLLGR+G L +A LI D
Sbjct: 345 SACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPD 404
Query: 414 AGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMM 473
+ W +LL AC VH N L E+A + ++EL P+ G LL NIY S +W+D+ +
Sbjct: 405 SVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKA 464
Query: 474 ISETEKKKSPGCSWI 488
+ + KK PGCSW+
Sbjct: 465 MRDRRVKKKPGCSWV 479
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 228/466 (48%), Gaps = 62/466 (13%)
Query: 85 RQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL---------------------LEAV 123
R ++ L +M R + +T +L A AR P+ + ++
Sbjct: 113 RTTLQLSLRMLRAALRPDAYTLPFLLLAAARCPAPAFAASAHALLQKLGLHNHDHTVHSL 172
Query: 124 ICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT-- 181
+ Y+ +G A+R+FD + R+V+SW++M+ Y G A + M + +V
Sbjct: 173 VTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVAEGAVPPN 232
Query: 182 -------------------------WV-------------AMIAGYGKCGEVREAKKVFD 203
WV A++ Y KCGE+ EA++VFD
Sbjct: 233 AVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSALVGMYEKCGEMAEARRVFD 292
Query: 204 EISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEM 263
I+ D W A+ Y QNG +K AI ++ MRQ R ++ +VG +SAC +G +E+
Sbjct: 293 AIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLSACAAVGALEL 352
Query: 264 AAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFAD 323
L ++ + YV AL+ M+SKCG L A + F ++ K+ S++++I A
Sbjct: 353 GTELDRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQVFEKLPCKNEASWNALICGLAF 412
Query: 324 HGKSQEALDMFLKMR-NEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLT 382
+G+ QEA+ F MR EG+ P+ +TFIGVL+AC H GL++DG + F+ +T F I P
Sbjct: 413 NGRGQEAIRQFELMRKQEGLRPDDITFIGVLSACVHAGLLKDGRRWFDSLTSEFQIIPKI 472
Query: 383 EHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLE 442
EH +CMVDLL R+G LE+A I DA GALL AC+ N E+ ++
Sbjct: 473 EHYSCMVDLLARAGHLEEAWDFIEKIPGKPDAVMLGALLAACRKCKNVEVSVRVINKIML 532
Query: 443 LGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
L P + N + + IYAS + DS ++ ++ E K PGCSWI
Sbjct: 533 LEPSNSWNYVVSSKIYASSDRLDDSARMRGLMRERGVSKIPGCSWI 578
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 236/488 (48%), Gaps = 63/488 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
ARQVF+ + K ++ W ++I + +++ ++ M V T S L +C
Sbjct: 238 ARQVFNVMLK-RSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCG 296
Query: 115 RVPSL---------------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ L A++ Y++ G MD+A +F E++VI+W++
Sbjct: 297 HLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTS 356
Query: 154 MVAGYANCGNMKAAKEFYDRM----TEKNSVT----------------------WV---- 183
M+ GY GN K+A M N+VT WV
Sbjct: 357 MINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKK 416
Query: 184 ---------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
A+I Y KC V + +VF + S W A+ + N A+ A+ ++K
Sbjct: 417 LDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFK 476
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M E V + I A L D++ L ++ V LI M+SKCG
Sbjct: 477 SMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCG 536
Query: 295 YLDLAWREFSRIKNK--DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
LD A + F I NK D+I +S +I + HG + A+ +F +M + G++PN++TF V
Sbjct: 537 SLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSV 596
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L ACSH GLV+DG F+ M + PL H TC+VDLLGR+G+L++A+ LI
Sbjct: 597 LHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQ 656
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
+ WGALLGAC +H N ELGE+AA L EL PE TGN LLANIYA++G+WKD+E K+
Sbjct: 657 NHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENHKL 716
Query: 473 MISETEKK 480
+S K+
Sbjct: 717 QLSPPPKE 724
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 143/309 (46%), Gaps = 29/309 (9%)
Query: 73 SLIRNHVLHAHFRQSILLYAK--MHRLGVLTSGFTFSSVLNACARV------PSLL--EA 122
SL + +LH H S LL++ +H L + F + ++ PSL A
Sbjct: 94 SLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNA 153
Query: 123 VICGYTKIGLMDDAQRLFDSMA----------ERNVISWSAMVAGYANCGNMKAAKE--- 169
+I Y G DA R+FDSM ++ + V N G + +
Sbjct: 154 IIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVS 213
Query: 170 -FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKA 228
F M +NS ++A Y CG+V A++VF+ + + W M + QNG +
Sbjct: 214 GFSSNMFVQNS-----LLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEE 268
Query: 229 AIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIH 288
A+ ++ M V +V A+ +C L ++E+ + K V + V NAL+
Sbjct: 269 ALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVD 328
Query: 289 MHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVT 348
M+S+CG +D A F+ K KDVI+++SMI + +G ++ AL + M+ +G+ PN VT
Sbjct: 329 MYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388
Query: 349 FIGVLTACS 357
+L+AC+
Sbjct: 389 LASLLSACA 397
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 122/244 (50%), Gaps = 3/244 (1%)
Query: 189 YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR-QENVRISEVA 247
Y CG V A+K+FD++S+P W A+ YV G+ A+ ++ M +
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYT 186
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
I AC+ + + + ++ +V N+L+ M+ CG + LA + F+ +
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+ V+S+++MI+ + +G+ +EAL +F M + +EP+ T + L +C H +E G K
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIK 306
Query: 368 QFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+L+ + ++ E +VD+ R G +++A + + K+ D TW +++ ++
Sbjct: 307 VHKLVQKNH-LQEKIEVRNALVDMYSRCGGMDEASLVFAETKEK-DVITWTSMINGYIMN 364
Query: 428 VNAE 431
NA+
Sbjct: 365 GNAK 368
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 62/296 (20%)
Query: 2 TSKYLVPRSKTFNQLKQV---HSYLLKTLTKPHDQYHYYAQFLIRLLQLPG--------D 50
T ++P LKQV HSYL+++ F+ ++ + G
Sbjct: 489 TFNSVIPAYAILADLKQVMNLHSYLVRS------------GFISKIAVITGLIDMYSKCG 536
Query: 51 NLSYARQVFDQIP-KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
+L YA ++FD+IP K K +W+ LI + +H H ++LL+ +M G+ + TF+SV
Sbjct: 537 SLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSV 596
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNM 164
L+AC+ GL+DD LF M E S ++ +V G +
Sbjct: 597 LHACSHR--------------GLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRL 642
Query: 165 KAAKEFYDRMT-EKNSVTWVAMIAGYGKC--------GEVREAKKVFDEISEPDASCWAA 215
A + M ++N W A++ G C GEV A+++F E+ +
Sbjct: 643 DEAYDLIKSMPFQQNHSIWGALL---GACLIHQNVELGEV-AAERLF-ELEPESTGNYIL 697
Query: 216 MTVCYVQNGYAKAA----IEMYKVMRQENVRISEVAMVGAISACTQL-GDVEMAAI 266
+ Y G K A +++ ++ N ++++ M ++ C L ++E+A I
Sbjct: 698 LANIYAAVGRWKDAENHKLQLSPPPKEINTFVTDLNMHPILTKCRALKSELELALI 753
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 220/412 (53%), Gaps = 40/412 (9%)
Query: 117 PSLLEAVICGYTKIGLMDDAQRLFDSMAER-NVISWSAMVAGYANCGN----MKAAKEFY 171
P +L +++ Y + G + DAQ+ FD M + + +SW+A++ Y + G + A+ +
Sbjct: 110 PHVLTSLLNLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSAF 169
Query: 172 DRMTEKNSVT--------------------WVAM----IAG-----------YGKCGEVR 196
+S T W A IAG Y KCGE+
Sbjct: 170 ASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMD 229
Query: 197 EAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACT 256
+A+ VFD++ D W AM Y NG+ + A+E++ M+ E +R + GA+SACT
Sbjct: 230 KARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACT 289
Query: 257 QLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS 316
+LG +++ + + + ALI M++KCG AW F +++N+D+I +++
Sbjct: 290 RLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNA 349
Query: 317 MITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVF 376
MI G + A + +M+ G+ N TFIG+L +C+H GLV+DG + F MT+++
Sbjct: 350 MILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLY 409
Query: 377 GIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIA 436
I+P EH MVDLL R+G L++AH LI D +A WGALLG CK+H NA+L E
Sbjct: 410 HIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAEHV 469
Query: 437 ARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+ L++L P +GN +L+NIY++ G+W+D+ +++ + +K P SW+
Sbjct: 470 LKQLIQLEPWNSGNYVVLSNIYSNSGRWEDAAKLRLEMKAKGVEKVPASSWV 521
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 129/314 (41%), Gaps = 56/314 (17%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR VFD++ K K W +++ + + H R+++ L+ M G+ +T + L+AC
Sbjct: 231 ARGVFDKM-KNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACT 289
Query: 115 RV---------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
R+ P L A+I Y K G +A +F M R++I W+A
Sbjct: 290 RLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNA 349
Query: 154 MVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
M+ G G+ K A +M + N T++ ++ G V++ ++ F
Sbjct: 350 MILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRN----- 404
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
MT Y + + IE Y +M +S ++ Q +E A++
Sbjct: 405 ------MTQLY----HIRPRIEHYGIMVD---LLSRAGLLQEAHQLIQDMPMEANAVVWG 451
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
+ GC +H + ++ +++ + +Y + +++ G+ ++
Sbjct: 452 ALLGGC------------KIHRNADLAEHVLKQLIQLEPWNSGNYVVLSNIYSNSGRWED 499
Query: 330 ALDMFLKMRNEGIE 343
A + L+M+ +G+E
Sbjct: 500 AAKLRLEMKAKGVE 513
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 245/499 (49%), Gaps = 63/499 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHR--LGVLTSGFTFSSV 109
LS A+ +FD+ K K W S+I + ++ L KM + FT +V
Sbjct: 255 LSEAQLLFDKNDK-KNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNV 313
Query: 110 LNAC---ARVPSLLE------------------AVICGYTKIGLMDDAQRLFDSMAERNV 148
L C + + SL E A I YT+ G + ++R+FD M + V
Sbjct: 314 LPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTV 373
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEK------------------------------- 177
SW+A++ GYA + + A + Y +MT+
Sbjct: 374 SSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGF 433
Query: 178 --------NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ +++++ Y CG+ A+ +FD + W M Y QNG A
Sbjct: 434 ALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEA 493
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
I +++ M + ++ E+A++ AC+QL + + L + +VS+++I M
Sbjct: 494 INLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDM 553
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++K G + L+ R F R++ KDV S++ +I + HG+ +EAL++F KM G++P+ TF
Sbjct: 554 YAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTF 613
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
G+L ACSH GLVEDG + F M + I+P EH TC+VD+LGR+G+++ A LI +
Sbjct: 614 TGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMP 673
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D+ W +LL +C++H N LGE A LLEL PEK N L++N++A GKW D
Sbjct: 674 GDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRR 733
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ + + +K GCSWI
Sbjct: 734 VRGRMKDIGLQKDAGCSWI 752
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 165/374 (44%), Gaps = 74/374 (19%)
Query: 53 SYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM-----HRLGVLTSGFTFS 107
S +R VFD++ + K F W +++ + + F ++ +++++ H+ FT
Sbjct: 51 SDSRMVFDKLRR-KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHK----PDNFTLP 105
Query: 108 SVLNACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAER 146
V+ ACA + L A+I Y K GL+++A ++F+ M ER
Sbjct: 106 CVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER 165
Query: 147 NVISWSAMVAGYANCGNMKAAKEFYDRMT--EKNSVTWVA-------------------- 184
N++SW++++ G++ G ++ + + M E++ V VA
Sbjct: 166 NLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMA 225
Query: 185 -------------------MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGY 225
+I Y KC + EA+ +FD+ + + W +M Y +
Sbjct: 226 VHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREED 285
Query: 226 AKAAIEMYKVMRQENVRI--SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS 283
+ + M+ E+ ++ E ++ + C + +++ L + V+
Sbjct: 286 VCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVA 345
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
NA I +++CG L + R F + K V S+++++ +A + ++ALD++L+M + G++
Sbjct: 346 NAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLD 405
Query: 344 PNQVTFIGVLTACS 357
P+ T +L ACS
Sbjct: 406 PDWFTIGSLLLACS 419
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 53/316 (16%)
Query: 85 RQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA 144
R+ I + ++H + ++ F VLN +I Y+ G D++ +FD +
Sbjct: 11 RKDIEVGRRLHEMVSASTQFCNDFVLNT---------RIITMYSMCGSPSDSRMVFDKLR 61
Query: 145 ERNVISWSAMVAGYANCGNMKAAKEFYDRM------------------------------ 174
+N+ W+A+V+ Y + A + +
Sbjct: 62 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121
Query: 175 ------TEKNSVTWV----AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG 224
T+ + V+ V A+IA YGKCG V EA KVF+ + E + W ++ + +NG
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181
Query: 225 YAKAAIEMYKVMR-QENVRISEVA-MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYV 282
+ + + ++ M E + +VA +V + C D+E + + + V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 283 SNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG- 341
+N+LI M+SKC +L A F + K+++S++SMI +A + KM+ E
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDA 301
Query: 342 -IEPNQVTFIGVLTAC 356
++ ++ T + VL C
Sbjct: 302 KMKADEFTILNVLPVC 317
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 116/245 (47%), Gaps = 11/245 (4%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY-KVMRQENVRI 243
+I Y CG +++ VFD++ + W A+ Y +N + A+ ++ +++ +
Sbjct: 40 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP 99
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREF 303
+ I AC L D+ + I+ + +V NALI M+ KCG ++ A + F
Sbjct: 100 DNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVF 159
Query: 304 SRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR--NEGIEPNQVTFIGVLTACSHGGL 361
+ ++++S++S+I F+++G QE+ + F +M E P+ T + VL C+
Sbjct: 160 EHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEED 219
Query: 362 VEDGCKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWG 418
+E G L ++ L E L ++D+ + L +A L+ D D + +W
Sbjct: 220 IEKGMAVHGLAVKL----GLNEELMVNNSLIDMYSKCRFLSEAQ-LLFDKNDKKNIVSWN 274
Query: 419 ALLGA 423
+++G
Sbjct: 275 SMIGG 279
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K++H + LK H + I + G + ++++FD++ + K W +I
Sbjct: 529 KELHCFALKA----HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLRE-KDVASWNVIIA 583
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA-------------------RVP 117
+ +H ++++ L+ KM RLG+ FTF+ +L AC+ +
Sbjct: 584 GYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIE 643
Query: 118 SLLEAVICGYT---KIGLMDDAQRLFDSM-AERNVISWSAMVAGYANCGNMKAAKEFYDR 173
LE C + G +DDA RL + M + + WS++++ GN+ ++ ++
Sbjct: 644 PKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANK 703
Query: 174 MTE------KNSVTWVAMIAGYGKCGEVREAKKVFDEIS-EPDASC 212
+ E +N V + AG GK +VR + +I + DA C
Sbjct: 704 LLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGC 749
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 252 ISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNA-LIHMHSKCGYLDLAWREFSRIKNKD 310
+ AC Q D+E+ L + V ++V N +I M+S CG + F +++ K+
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64
Query: 311 VISYSSMITAFADHGKSQEALDMFLKMRN-EGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
+ ++++++A+ + ++A+ +F ++ + +P+ T V+ AC+ GL++ G Q
Sbjct: 65 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLGQI 122
>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
Length = 1118
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 228/451 (50%), Gaps = 60/451 (13%)
Query: 98 GVLTSGFTFSSVLNACARVP---------------------SLLEAVICGYTKIGLMDDA 136
GVL + T SV++A A++ +L+ AV+ Y KIG + +
Sbjct: 664 GVLVTPVTLVSVMSAAAQLGHVRKGQACHAYVVRNSLSYDLALVNAVLGFYVKIGDLQAS 723
Query: 137 QRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV--------- 183
RLF+ M +R+VI+WS M+ GY G+ Y M + NSVT V
Sbjct: 724 MRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALV 783
Query: 184 --------------------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMT 217
A++ Y KC EA ++F + + D WAA+
Sbjct: 784 VDAEEGKRLHRVAVSIGCELELGVATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVI 843
Query: 218 VCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCD 277
QN ++ +K M + V MV ++AC++ G +A L ++ +
Sbjct: 844 GGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFN 903
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
+V+ AL+ ++SKCG LD A R F KD++ + SMI + HG QEA+ ++ +M
Sbjct: 904 NNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRM 963
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
I+PN VTF+ VL+ACSH GLV++G + F+ MT+VFG+ P EH + MVDLLGR+G+
Sbjct: 964 IASSIQPNNVTFLSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGE 1023
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
L++A +I D A TW ALL AC+ H N ++ E+AA++LL+L P+ G LL N+
Sbjct: 1024 LQEAIRVIRDMDGRAVAHTWCALLAACRKHNNTKMSEVAAKNLLKLDPDHVGYYNLLTNL 1083
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
YA KW++ + + M+ + +K G S +
Sbjct: 1084 YAFDEKWENVKDTRDMVKGRDLRKVAGYSSV 1114
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 192/470 (40%), Gaps = 96/470 (20%)
Query: 31 HDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILL 90
H +H A L PG AR +FD+I + T L +L+R H+ +R +ILL
Sbjct: 504 HSSHHLTAHVLA--CYPPG----LARDLFDEI-RSPTPRLANALLRAHIRARQWRAAILL 556
Query: 91 YAKMHRLGVLTSGFTFSSVLNACARVPSLLE----------------------AVICGYT 128
RL V GFT S +L AC +PSL A++ Y+
Sbjct: 557 G---QRLRVRRDGFTLSLLLRACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYS 613
Query: 129 KIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDR--------------- 173
+ G M A + + + +++ +++V GY G + A EF+ R
Sbjct: 614 RCGDMAGAINAYGMLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLV 673
Query: 174 --------------------MTEKNSVTW-----VAMIAGYGKCGEVREAKKVFDEISEP 208
+NS+++ A++ Y K G+++ + ++F+ +++
Sbjct: 674 SVMSAAAQLGHVRKGQACHAYVVRNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDR 733
Query: 209 DASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA 268
D W+ M YVQ+G A MY+ M + V+ + V +V + AC + D E L
Sbjct: 734 DVITWSCMIKGYVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLH 793
Query: 269 KHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQ 328
+ C+ V+ AL+ M+ KC + A R F R+ KDV++++++I +
Sbjct: 794 RVAVSIGCELELGVATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPG 853
Query: 329 EALDMFLKMRNEGIEPNQVTFIGVLTACS-----------HGGLVEDGCKQFELMTRVFG 377
E+L F M P+ VT + VL ACS HG LV +G +
Sbjct: 854 ESLHSFKCMLLNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVA---- 909
Query: 378 IKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
++DL + G L+ A + + D WG+++ H
Sbjct: 910 --------AALLDLYSKCGDLDSA-VRVFEGTTEKDIVVWGSMIAGYGAH 950
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 264/539 (48%), Gaps = 65/539 (12%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S+ + +QVH+ +++ +++ + A L+ + G + A +F+++P
Sbjct: 122 SRNIDAGRQVHAMVVRM---GYEKDVFTANALVDMYVKMG-RVDIASVIFEKMPDSDV-V 176
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-LEAVICG-- 126
W +LI VL+ H ++I L +M G++ + F SS+L ACA + L I G
Sbjct: 177 SWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
Query: 127 ---------YTKIGL---------MDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAK 168
Y +GL +DDA ++FD M+ R++I W+A+++G ++ G A
Sbjct: 237 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 296
Query: 169 E-FYDRMTEK---NSVTWVA-----------------------------------MIAGY 189
FY E N T A +I Y
Sbjct: 297 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSY 356
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
KC + +A +VF+E S D +M Q + + AI+++ M ++ + +
Sbjct: 357 WKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 416
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
++AC L E + H+ + + NAL++ ++KCG ++ A FS + +
Sbjct: 417 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 476
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
V+S+S+MI A HG + AL++F +M +EGI PN +T VL AC+H GLV++ + F
Sbjct: 477 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 536
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M +FGI EH +CM+DLLGR+G+L+ A L+ +A WGALLGA +VH +
Sbjct: 537 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKD 596
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
ELG++AA L L PEK+G LLAN YAS G W + V+ ++ ++ KK P SW+
Sbjct: 597 PELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWV 655
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 40/276 (14%)
Query: 122 AVICGYTKIGLMDDAQRLFDSM-AERNVISWSAMVAGYA---NCG--------------- 162
A++ Y G MDDA+R+FD +ERN +SW+ +++ Y CG
Sbjct: 47 ALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 106
Query: 163 -----------------NMKAAKEFYDRMT----EKNSVTWVAMIAGYGKCGEVREAKKV 201
N+ A ++ + + EK+ T A++ Y K G V A +
Sbjct: 107 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVI 166
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
F+++ + D W A+ V NG+ AIE+ M+ + + + + AC G
Sbjct: 167 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 226
Query: 262 EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
++ + + + D +Y+ L+ M++K +LD A + F + ++D+I ++++I+
Sbjct: 227 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGC 286
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACS 357
+ G+ EA +F +R EG+ N+ T VL + +
Sbjct: 287 SHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTA 322
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 181/439 (41%), Gaps = 74/439 (16%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD+ + W L+ +V + +I ++ +M G+ + F FS V+NAC
Sbjct: 61 ARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACT 120
Query: 115 ---------RVPSLL------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+V +++ A++ Y K+G +D A +F+ M + +V+SW+A
Sbjct: 121 GSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNA 180
Query: 154 MVAG-----------------------------------YANCGNMKAAKEFYDRMTEKN 178
+++G A G ++ + M + N
Sbjct: 181 LISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN 240
Query: 179 SVT----WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
+ + V ++ Y K + +A KVFD +S D W A+ G A ++
Sbjct: 241 ADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFY 300
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
+R+E + ++ + + + L + ++ +V N LI + KC
Sbjct: 301 GLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCS 360
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFA--DHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
L A R F + D+I+ +SMITA + DHG+ A+ +F++M +G+EP+ +
Sbjct: 361 CLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEG--AIKLFMEMLRKGLEPDPFVLSSL 418
Query: 353 LTACSHGGLVEDGCKQF--ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
L AC+ E G KQ L+ R F + +V + G +E A + +
Sbjct: 419 LNACASLSAYEQG-KQVHAHLIKRQFMSDAFAGN--ALVYTYAKCGSIEDAE---LAFSS 472
Query: 411 FCDAG--TWGALLGACKVH 427
+ G +W A++G H
Sbjct: 473 LPERGVVSWSAMIGGLAQH 491
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 123/243 (50%), Gaps = 5/243 (2%)
Query: 184 AMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
A++A YG G + +A++VFDE SE +A W + YV+N AI+++ M ++
Sbjct: 47 ALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 106
Query: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302
+E ++ACT +++ + V ++ + +NAL+ M+ K G +D+A
Sbjct: 107 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVI 166
Query: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLV 362
F ++ + DV+S++++I+ +G A+++ L+M++ G+ PN +L AC+ G
Sbjct: 167 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 226
Query: 363 EDGCKQFELMTRVFGIKPLTEHLTC-MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ G + M + +++ +VD+ ++ L+ A + D+ D W AL+
Sbjct: 227 DLGRQIHGFMIKANADS--DDYIGVGLVDMYAKNHFLDDAMK-VFDWMSHRDLILWNALI 283
Query: 422 GAC 424
C
Sbjct: 284 SGC 286
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRI-KNKDVISYSSMITAFADHGKSQEALDMFLKMRN 339
+V+NAL+ M+ G++D A R F ++ +S++ +++A+ + + +A+ +F +M
Sbjct: 43 FVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW 102
Query: 340 EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLE 399
GI+P + F V+ AC+ G D +Q M G + +VD+ + G+++
Sbjct: 103 SGIQPTEFGFSCVVNACT-GSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVD 161
Query: 400 KAHSLIMDYKDFCDAGTWGALLGAC 424
A S+I + D +W AL+ C
Sbjct: 162 IA-SVIFEKMPDSDVVSWNALISGC 185
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 250/496 (50%), Gaps = 63/496 (12%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A + FD++ + + W +++ +A +++ L+ +M GV T SSVL C
Sbjct: 123 AYRAFDEM-RHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCV 181
Query: 115 ----RVPSLL------------EAVICG-----YTKIGLMDDAQRLFDSMAERNVISWSA 153
R +L E +C Y K+G++++ +++FD M+ R++++W++
Sbjct: 182 LLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNS 241
Query: 154 MVAGYANCGNMKAAKEFY----DRMTEKNSVTWVAMIAGYGKCGEV-------------- 195
+++G+ G + +A E + D + +T +++ + +CG++
Sbjct: 242 IISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRG 301
Query: 196 ----------------------REAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMY 233
A+++FD + DA W + Y+QNG A AI +Y
Sbjct: 302 WDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVY 361
Query: 234 KVM-RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
M + E ++ + V + A + LG ++ + + + YV +I +++K
Sbjct: 362 DHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAK 421
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG LD A F + + ++++I+ HG +AL +F +M+ EGI P+ VTF+ +
Sbjct: 422 CGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSL 481
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L ACSH GLV+ G F +M +GIKP+ +H CMVD+ GR+GQL+ A I +
Sbjct: 482 LAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKP 541
Query: 413 DAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKM 472
D+ WGALLGAC++H N E+G++A+++L EL P+ G L++N+YA +GKW + V+
Sbjct: 542 DSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRS 601
Query: 473 MISETEKKKSPGCSWI 488
++ +K+PG S I
Sbjct: 602 LVRRQNLQKTPGWSSI 617
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 54/368 (14%)
Query: 110 LNACARVPSLLE-------AVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
L+ACA LL A++ Y + G + DA R FD M R+V +W+AM++G C
Sbjct: 90 LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGL--CR 147
Query: 163 NMKAAKE--FYDRMTEKN------SVTWV------------------------------- 183
N +AA+ + RM + +V+ V
Sbjct: 148 NARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFV 207
Query: 184 --AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
AMI YGK G + E +KVFD +S D W ++ + Q G +A+EM+ MR V
Sbjct: 208 CNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGV 267
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAW 300
+ ++ SA Q GD+ + ++ D + ++ NA++ M++K ++ A
Sbjct: 268 SPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQ 327
Query: 301 REFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTFIGVLTACSHG 359
R F + +D +S++++IT + +G + EA+ ++ M ++EG++P Q TF+ VL A SH
Sbjct: 328 RMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHL 387
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
G ++ G + L + G+ TC++DL + G+L++A L+ + G W A
Sbjct: 388 GALQQGTRMHALSIKT-GLNLDVYVGTCVIDLYAKCGKLDEA-MLLFEQTPRRSTGPWNA 445
Query: 420 LLGACKVH 427
++ VH
Sbjct: 446 VISGVGVH 453
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 24/200 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L A +F+Q P+ ++ W ++I +H H +++ L+++M + G+ TF S+L
Sbjct: 425 LDEAMLLFEQTPR-RSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLA 483
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKA 166
AC+ GL+D + F+ M I ++ MV + G +
Sbjct: 484 ACSHA--------------GLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDD 529
Query: 167 AKEFYDRMTEK-NSVTWVAMIAG---YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQ 222
A +F M K +S W A++ +G + A + E+ + + M+ Y +
Sbjct: 530 AFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAK 589
Query: 223 NGYAKAAIEMYKVMRQENVR 242
G E+ ++R++N++
Sbjct: 590 VGKWDGVDEVRSLVRRQNLQ 609
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 232/426 (54%), Gaps = 11/426 (2%)
Query: 66 KTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVIC 125
+ F++ S+IR +VL ++IL Y M G+L + +TF ++ AC + S + + C
Sbjct: 347 RNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKLIGC 406
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
L+ F + V+S A++ Y+ +M A+ +DR+ ++ V W AM
Sbjct: 407 ------LVHAHVVTFGFDEDPFVVS--ALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAM 458
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I GYGK G+V A+ +F+++ E +A W+A+ Y + G K + +++ M++ +E
Sbjct: 459 IDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNE 518
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+V ++AC LG + + + + D ++ AL+ M+SKCG ++ A F
Sbjct: 519 SVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQG 578
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
I NKD ++++MI+ A +G + ++L++F KM + G +P + TF+ VLTAC+H LV +G
Sbjct: 579 IPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREG 638
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI---MDYKDFCDAGTWGALLG 422
K FE M+ +G++P EH C+VDL+ R+G L +A I M DA WGA LG
Sbjct: 639 LKLFEQMSSNYGVEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAXLG 698
Query: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482
AC+ + N E+G + L ++G G L N+Y G +++ V+ +ISE KK
Sbjct: 699 ACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEXGMKKK 758
Query: 483 PGCSWI 488
PGCS I
Sbjct: 759 PGCSII 764
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 244/484 (50%), Gaps = 46/484 (9%)
Query: 47 LPGDNLSYARQVFDQIPKCKTQFL-WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFT 105
+ G A ++FD++ C + W S+I +V + + + +Y +M LG+ T
Sbjct: 58 IEGKRSESASELFDKL--CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 115
Query: 106 FSSVLNACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMA 144
SVL CA+ +L ++ Y+K G +D A R+F+ M
Sbjct: 116 IISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 175
Query: 145 ERNVISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKK 200
ERNV+SW++M+AGY G A +M ++ + V +++ + G + K
Sbjct: 176 ERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 235
Query: 201 VFDEISEPDAS-----CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAIS-- 253
V D I + + C A M + Y + G + A ++ M +++ IS MVG +
Sbjct: 236 VHDYIKANNMASNLFVCNALMDM-YAKCGSMEGANSVFSTMVVKDI-ISWNTMVGELKPD 293
Query: 254 ---------ACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
AC L +E + ++ +V+NAL+ ++ KCG L LA F
Sbjct: 294 SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 353
Query: 305 RIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVED 364
I +KD++S++ MI + HG EA+ F +MR+ GIEP++V+FI +L ACSH GL+E
Sbjct: 354 MIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 413
Query: 365 GCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGAC 424
G + F +M F I+P EH CMVDLL R+G L KA+ I DA WGALL C
Sbjct: 414 GWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGC 473
Query: 425 KVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
+++ + EL E A + EL PE TG LLANIYA KW++ + ++ I + +K+PG
Sbjct: 474 RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPG 533
Query: 485 CSWI 488
CSWI
Sbjct: 534 CSWI 537
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 22/339 (6%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
Y G + + +R+FD+M ++NV W+ MV+ YA G+ K + + M EK
Sbjct: 6 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI------- 58
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
GK E A ++FD++ + D W +M YV NG + + +YK M + +
Sbjct: 59 --EGKRSE--SASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLA 114
Query: 247 AMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRI 306
++ + C + G + + + + +R SN L+ M+SKCG LD A R F ++
Sbjct: 115 TIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 174
Query: 307 KNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGC 366
++V+S++SMI + G S A+ + +M EG++ + V +L AC+ G +++G
Sbjct: 175 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG- 233
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLI--MDYKDFCDAGTWGALLGAC 424
K + + ++D+ + G +E A+S+ M KD +W ++G
Sbjct: 234 KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDII---SWNTMVGEL 290
Query: 425 KVHVNAE---LGEIAARHLLELGPEKTGNSALLANIYAS 460
K L A+ LE G E G +L N Y+S
Sbjct: 291 KPDSRTMACILPACASLSALERGKEIHG--YILRNGYSS 327
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 265/539 (49%), Gaps = 65/539 (12%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S+ +QVH+ +++ +D+ + A L+ + G + A +F+++P
Sbjct: 215 SRNIEAGRQVHAMVVRM---GYDKDVFTANALVDMYMKMG-RVDIASVIFEKMPDSDV-V 269
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-LEAVICG-- 126
W +LI VL+ H ++I L +M G++ + FT SS+L AC+ + L I G
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Query: 127 ---------YTKIGL---------MDDAQRLFDSMAERNVISWSAMVAGYANCGNM-KAA 167
Y +GL +DDA+++FD M R++I +A+++G ++ G +A
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 168 KEFYDRMTEK---NSVTWVA-----------------------------------MIAGY 189
FY+ E N T A +I Y
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
KC + +A +VF+E S D +M Q + + AI+++ M ++ + +
Sbjct: 450 WKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
++AC L E + H+ + + NAL++ ++KCG ++ A FS + +
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
V+S+S+MI A HG + AL++F +M +EGI PN +T VL AC+H GLV++ + F
Sbjct: 570 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 629
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M +FGI EH +CM+DLLGR+G+L+ A L+ +A WGALLGA +VH +
Sbjct: 630 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKD 689
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
ELG++AA L L PEK+G LLAN YAS G W + V+ ++ ++ KK P SWI
Sbjct: 690 PELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWI 748
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 159/359 (44%), Gaps = 59/359 (16%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC- 113
AR+ FD+IP W+SL+ + + R +I + M GV + F VL
Sbjct: 56 ARRFFDEIPD-PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP 114
Query: 114 -ARVPS----------------LLEAVICGYTKIGLMDDAQRLFDSM-AERNVISWSAMV 155
AR+ + + A++ Y G MDDA+R+F+ +ERN +SW+ ++
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174
Query: 156 AGYA---NCG--------------------------------NMKAAKEFYDRMT----E 176
+ Y CG N++A ++ + + +
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
K+ T A++ Y K G V A +F+++ + D W A+ V NG+ AIE+ M
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ + + + + AC+ G ++ + + + D +Y+ L+ M++K +L
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
D A + F + ++D+I +++I+ + G+ EAL +F ++R EG+ N+ T VL +
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 37/267 (13%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM--------------------- 174
A+R FD + + +SWS++V Y+N G ++A + + M
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 175 -------------TEKNSVTWV--AMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTV 218
T S +V A++A YG G + +A++VF+E SE +A W +
Sbjct: 116 ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
YV+N AI+++ M ++ +E ++ACT ++E + V D+
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDK 235
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
+ +NAL+ M+ K G +D+A F ++ + DV+S++++I+ +G A+++ L+M+
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDG 365
G+ PN T +L ACS G + G
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLG 322
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ Y KC A++ FDEI +P W+++ Y NG ++AI+ + MR E V +
Sbjct: 43 LISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
E A+ + C D + A + +V+NAL+ M+ G++D A R F+
Sbjct: 103 EFALP-VVLKCVP--DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 305 RIKN-KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ ++ +S++ +++A+ + + +A+ +F +M GI+P + F V+ AC+ +E
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G +Q M G +VD+ + G+++ A S+I + D +W AL+
Sbjct: 220 AG-RQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA-SVIFEKMPDSDVVSWNALISG 277
Query: 424 C 424
C
Sbjct: 278 C 278
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
N LI +SKC A R F I + +S+SS++TA++++G + A+ F MR EG+
Sbjct: 41 NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
N+ VL L Q M G +V + G G ++ A
Sbjct: 101 CNEFALPVVLKCVPDARL----GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARR 156
Query: 404 LIMDYKDFCDAGTWGALLGA 423
+ + +A +W L+ A
Sbjct: 157 VFNEADSERNAVSWNGLMSA 176
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 265/539 (49%), Gaps = 65/539 (12%)
Query: 10 SKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQF 69
S+ +QVH+ +++ +D+ + A L+ + G + A +F+++P
Sbjct: 215 SRNIEAGRQVHAMVVRM---GYDKDVFTANALVDMYMKMG-RVDIASVIFEKMPDSDV-V 269
Query: 70 LWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL-LEAVICG-- 126
W +LI VL+ H ++I L +M G++ + FT SS+L AC+ + L I G
Sbjct: 270 SWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Query: 127 ---------YTKIGL---------MDDAQRLFDSMAERNVISWSAMVAGYANCGNM-KAA 167
Y +GL +DDA+++FD M R++I +A+++G ++ G +A
Sbjct: 330 IKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEAL 389
Query: 168 KEFYDRMTEK---NSVTWVA-----------------------------------MIAGY 189
FY+ E N T A +I Y
Sbjct: 390 SLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSY 449
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
KC + +A +VF+E S D +M Q + + AI+++ M ++ + +
Sbjct: 450 WKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLS 509
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
++AC L E + H+ + + NAL++ ++KCG ++ A FS + +
Sbjct: 510 SLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER 569
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
V+S+S+MI A HG + AL++F +M +EGI PN +T VL AC+H GLV++ + F
Sbjct: 570 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 629
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVN 429
M +FGI EH +CM+DLLGR+G+L+ A L+ +A WGALLGA +VH +
Sbjct: 630 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKD 689
Query: 430 AELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
ELG++AA L L PEK+G LLAN YAS G W + V+ ++ ++ KK P SWI
Sbjct: 690 PELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWI 748
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 160/359 (44%), Gaps = 59/359 (16%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNAC- 113
AR+VFD+IP W+SL+ + + R +I + M GV + F VL
Sbjct: 56 ARRVFDEIPD-PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP 114
Query: 114 -ARVPS----------------LLEAVICGYTKIGLMDDAQRLFDSM-AERNVISWSAMV 155
AR+ + + A++ Y G MDDA+R+F+ +ERN +SW+ ++
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174
Query: 156 AGYA---NCG--------------------------------NMKAAKEFYDRMT----E 176
+ Y CG N++A ++ + + +
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
K+ T A++ Y K G V A +F+++ + D W A+ V NG+ AIE+ M
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
+ + + + + AC+ G ++ + + + D +Y+ L+ M++K +L
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTA 355
D A + F + ++D+I +++I+ + G+ EAL +F ++R EG+ N+ T VL +
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 37/267 (13%)
Query: 136 AQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM--------------------- 174
A+R+FD + + +SWS++V Y+N G ++A + + M
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 175 -------------TEKNSVTWV--AMIAGYGKCGEVREAKKVFDEI-SEPDASCWAAMTV 218
T S +V A++A YG G + +A++VF+E SE +A W +
Sbjct: 116 ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 219 CYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDR 278
YV+N AI+++ M ++ +E ++ACT ++E + V D+
Sbjct: 176 AYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDK 235
Query: 279 TNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMR 338
+ +NAL+ M+ K G +D+A F ++ + DV+S++++I+ +G A+++ L+M+
Sbjct: 236 DVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK 295
Query: 339 NEGIEPNQVTFIGVLTACSHGGLVEDG 365
G+ PN T +L ACS G + G
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLG 322
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 120/241 (49%), Gaps = 6/241 (2%)
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRIS 244
+I+ Y KC A++VFDEI +P W+++ Y NG ++AI+ + MR E V +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 245 EVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFS 304
E A+ + C D + A + +V+NAL+ M+ G++D A R F+
Sbjct: 103 EFALP-VVLKCVP--DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 305 RIKN-KDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVE 363
+ ++ +S++ +++A+ + + +A+ +F +M GI+P + F V+ AC+ +E
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 364 DGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGA 423
G +Q M G +VD+ + G+++ A S+I + D +W AL+
Sbjct: 220 AG-RQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA-SVIFEKMPDSDVVSWNALISG 277
Query: 424 C 424
C
Sbjct: 278 C 278
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
Query: 284 NALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIE 343
N LI +SKC A R F I + +S+SS++TA++++G + A+ F MR EG+
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 344 PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHS 403
N+ VL L Q M G +V + G G ++ A
Sbjct: 101 CNEFALPVVLKCVPDARL----GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARR 156
Query: 404 LIMDYKDFCDAGTWGALLGA 423
+ + +A +W L+ A
Sbjct: 157 VFNEADSERNAVSWNGLMSA 176
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 211/407 (51%), Gaps = 39/407 (9%)
Query: 121 EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKN-- 178
A+I Y G + AQ++FD M +R+++SW+ ++ GY+ K +D MT N
Sbjct: 63 NALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIK 122
Query: 179 --SVTWVAMIAG-----------------------------------YGKCGEVREAKKV 201
+VT V +I YG+ G + A+K+
Sbjct: 123 ADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKL 182
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
FD + + D W +M Y Q A+++++ M V+ +V + +SAC LG +
Sbjct: 183 FDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKL 242
Query: 262 EMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAF 321
++ + ++ YV N+LI M+ KCG ++ A F R+K+KD +S++S+I+
Sbjct: 243 DVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGL 302
Query: 322 ADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPL 381
A +G + ALD+F +M EG++P TF+G+L AC+H GLV G + FE M V G+ P
Sbjct: 303 AVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPA 362
Query: 382 TEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLL 441
+H C+VDLL RSG ++KA+ I D W LL ACK+H N L EIA + LL
Sbjct: 363 MKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLL 422
Query: 442 ELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
EL P +GN LL+N YA + +W D+ ++ ++ +++ +K G S I
Sbjct: 423 ELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSI 469
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 35/263 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
NL+ AR++FD +PK + WTS+I + + F ++ L+ +M V T +SVL
Sbjct: 175 NLTAARKLFDNMPK-RDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVL 233
Query: 111 NACARVPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVI 149
+ACA + L ++I Y K G+++ A +F M +++ +
Sbjct: 234 SACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSV 293
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWVAMIAGYGKCGEVREAKKVFDEI 205
SW+++++G A G +A + + +M + T+V ++ G V + + F+ +
Sbjct: 294 SWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESM 353
Query: 206 SE-----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
P + + ++G A E K M + V +SAC G+
Sbjct: 354 ESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMP---IVPDVVVWRILLSACKLHGN 410
Query: 261 VEMAAILAKHVDE-GCCDRTNYV 282
V +A I K + E CD NYV
Sbjct: 411 VVLAEIATKRLLELDPCDSGNYV 433
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+VSNALIHM++ CG L A + F + ++D++S++++I ++ + K +E L +F M
Sbjct: 60 FVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAA 119
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL---TCMVDLLGRSGQ 397
I+ + VT + ++ ACSH G E + M + L + ++D+ GR G
Sbjct: 120 NIKADAVTMVKIILACSHLGDWEFA----DSMVKYIKENNLEIDVYLGNTLIDMYGRLGN 175
Query: 398 LEKAHSLIMDYKDFCDAGTWGALL 421
L A L D D +W +++
Sbjct: 176 LTAARKLF-DNMPKRDVISWTSMI 198
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 244/499 (48%), Gaps = 83/499 (16%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
L AR VFDQ+P+ + WT+++ +V F +++ L +M +GV SG S++
Sbjct: 139 LVSARLVFDQMPE-RDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIA 197
Query: 112 ACARV-----------------------PSLLEAVICGYTKIGLMDDAQRLFDSMAERNV 148
+ S+ A+I Y K G + AQRLFD +++R+V
Sbjct: 198 VFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSV 257
Query: 149 ISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVT------------------W---- 182
+SW+ M+AG + + ++RM E+ N +T W
Sbjct: 258 VSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAY 317
Query: 183 -------------VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
A+I YGKCG+V A+ +F+ + + D W+ + Y
Sbjct: 318 LLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQV 377
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++ M +V+ + V MV +S C + G +++ +++ + + ALI+M
Sbjct: 378 FNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINM 437
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++KCG + +A F+ +D+ +++M+ F+ HG +EAL++F +M + G+EPN +TF
Sbjct: 438 YAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITF 497
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ + ACSH GL+ EH C+VDLLGR+G L++AH++I +
Sbjct: 498 VSIFHACSHSGLM--------------------EHYGCLVDLLGRAGHLDEAHNIIENMP 537
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+ WGALL ACK+H N LGE+AAR +LEL P+ G S L +NIYAS +W D
Sbjct: 538 MRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTS 597
Query: 470 VKMMISETEKKKSPGCSWI 488
V+ +S + KK PG SWI
Sbjct: 598 VREAMSHSGMKKEPGLSWI 616
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 197/478 (41%), Gaps = 88/478 (18%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
Q Q+H++ +KT + H+ + +++Q P+ L
Sbjct: 21 NLQQTHQLHAHFIKT--QFHNPHPFFSQSHF-------------------TPEANYNLLI 59
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPS------------- 118
+S NH+ A F + L+ + + L + F S+L ACA+ S
Sbjct: 60 SSYTNNHLPQASF--NCYLHMRSNDAAALDN-FILPSLLKACAQASSGDLGRELHGFAQK 116
Query: 119 --------LLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM---------------- 154
+ A++ Y K G + A+ +FD M ER+V+SW+ M
Sbjct: 117 NGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRL 176
Query: 155 -------------------VAGYANCGNMKAAKEFYDRMT-----EKNSVTW-VAMIAGY 189
+A + N +MK+ + + + EK V+ A+I Y
Sbjct: 177 VREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMY 236
Query: 190 GKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMV 249
K G + A+++FD +S+ W M +++ + + M +E + +E+ ++
Sbjct: 237 CKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLL 296
Query: 250 GAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNK 309
I+ C +G +++ ++ + + ALI M+ KCG + A F+ +K K
Sbjct: 297 SLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKK 356
Query: 310 DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQF 369
DV +S +I+A+A + ++F++M N ++PN VT + +L+ C+ G ++ G
Sbjct: 357 DVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTH 416
Query: 370 ELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVH 427
+ R G++ T ++++ + G + A SL + D W ++ +H
Sbjct: 417 AYINR-HGLEVDVILETALINMYAKCGDVTIARSLFNEAMQR-DIRMWNTMMAGFSMH 472
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/490 (32%), Positives = 258/490 (52%), Gaps = 26/490 (5%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKC 65
L+ K+ Q+KQ H+ L+ T H A L++L +LSYA ++FDQIP+
Sbjct: 22 LIDSCKSMQQIKQTHAQLITTALISHP---VSANKLLKLAACA--SLSYAHKLFDQIPQ- 75
Query: 66 KTQFLWTSLIRNHVLHAHF-RQSILLYAKMHR-LGVLTSGFTFSSVLNACARVPSLLEA- 122
F++ ++I+ H L H S++++ + + LG+ + ++F +AC + E
Sbjct: 76 PDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGE 135
Query: 123 -VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVT 181
V K+GL E NV +A++ Y G + +++ + +++ +
Sbjct: 136 QVRIHAVKVGL------------ENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYS 183
Query: 182 WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENV 241
W +IA Y G + AK++FD + E D W+ + YVQ G A++ + M Q
Sbjct: 184 WNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGP 243
Query: 242 RISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWR 301
+ +E +V A++AC+ L ++ + ++ +G + ++I M++KCG ++ A R
Sbjct: 244 KPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASR 303
Query: 302 EFSRIKNKD-VISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGG 360
F K K V +++MI FA HG EA+++F +M+ E I PN+VTFI +L ACSHG
Sbjct: 304 VFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGY 363
Query: 361 LVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGAL 420
+VE+G F LM + I P EH CMVDLL RSG L++A +I D WGAL
Sbjct: 364 MVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGAL 423
Query: 421 LGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV--KMMISETE 478
L AC+++ + E G R + + P G LL+NIY++ G+W ++ I+ K IS +
Sbjct: 424 LNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEISR-D 482
Query: 479 KKKSPGCSWI 488
+KK PGCS I
Sbjct: 483 RKKIPGCSSI 492
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 249/497 (50%), Gaps = 65/497 (13%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLS-YARQVFDQIPKCKT 67
+ N LKQVH+ +L T + +L LL S YA +F+ IP T
Sbjct: 14 KCHNLNTLKQVHAQMLTT------GLSFQTYYLSHLLNTSSKFASTYAFTIFNHIPN-PT 66
Query: 68 QFLWTSLIRNHVLHA---HFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVI 124
FL+ +LI + H+ H S+ + H+ + + FTF S+ ACA P L
Sbjct: 67 LFLYNTLISSLTHHSDQIHLAFSLYNHILTHK-TLQPNSFTFPSLFKACASHPWLQHGPP 125
Query: 125 CGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVA 184
+ + Q +D + +++++
Sbjct: 126 LHAHVLKFL---QPPYDPFVQNSLLNF--------------------------------- 149
Query: 185 MIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNG----YAKA---------AIE 231
Y K G++ ++ +FD+ISEPD + W M Y Q+ Y+ + A+
Sbjct: 150 ----YAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEALH 205
Query: 232 MYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHS 291
++ M+ ++ +EV +V ISAC+ LG + A +V +V AL+ M+S
Sbjct: 206 LFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVDMYS 265
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG L+LA + F + ++D Y++MI FA HG +AL+++ M+ E + P+ T +
Sbjct: 266 KCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVV 325
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+ ACSHGGLVE+G + FE M V G++P EH C++DLLGR+G+L++A + D
Sbjct: 326 TMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMK 385
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
+A W +LLGA K+H N E+GE A +HL+EL PE +GN LL+N+YAS+G+W D + V+
Sbjct: 386 PNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVR 445
Query: 472 MMISETEKKKSPGCSWI 488
M++ + K PG S +
Sbjct: 446 MLMKDHGVDKLPGFSLV 462
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 157/372 (42%), Gaps = 86/372 (23%)
Query: 1 MTSKYLVPRSKTFNQL-------------KQVHSYLLKTLTKPHDQY------HYYAQFL 41
+T K L P S TF L +H+++LK L P+D + ++YA++
Sbjct: 95 LTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKY- 153
Query: 42 IRLLQLPGDNLSYARQVFDQI--PKCKTQFLWTSLIR------NHVLHA-HFR------Q 86
L +R +FDQI P T W +++ +HV ++ F +
Sbjct: 154 --------GKLCVSRYLFDQISEPDLAT---WNTMLAAYAQSASHVSYSTSFEDADMSLE 202
Query: 87 SILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE---------------------AVIC 125
++ L+ M + + T ++++AC+ + +L + A++
Sbjct: 203 ALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVGTALVD 262
Query: 126 GYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSV----T 181
Y+K G ++ A +LFD +++R+ ++AM+ G+A G+ A E Y M ++ V T
Sbjct: 263 MYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGAT 322
Query: 182 WVAMIAGYGKCGEVREAKKVFDEIS-----EPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
V + G V E ++F+ + EP + + + G K A E + M
Sbjct: 323 IVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDM 382
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRT-NYVSNALIHMHSKCGY 295
+ I +++GA G++EM KH+ E + + NYV L +M++ G
Sbjct: 383 PMKPNAILWRSLLGAAKLH---GNLEMGEAALKHLIELEPETSGNYV--LLSNMYASIG- 436
Query: 296 LDLAWREFSRIK 307
W + R++
Sbjct: 437 ---RWNDVKRVR 445
>gi|357156964|ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Brachypodium distachyon]
Length = 710
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 243/502 (48%), Gaps = 65/502 (12%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHV-LHAHFRQSIL-LYAKMHRLGVLTSGFTF-- 106
+L+YAR+VFD P + ++W +L+R H HA + S L LY +M GV +T+
Sbjct: 198 SLAYARRVFDAAPH-RDVYMWNTLLRVHAHSHAEPQSSALSLYKRMRAAGVAPDHYTYPI 256
Query: 107 -------------------SSVLNACARVPSLLEAVICGYTKIGLMDDAQRLF--DSMAE 145
+V A A + A+I Y + G + DA+++F + A
Sbjct: 257 VLPACAAARAPRLGRAAHGDAVRFALAGDCFVHSALIAMYCQDGDVADAEQVFLGTAGAS 316
Query: 146 RNVISWSAMVAGYA-NCGNMKAAKEFYDRMTE---KNSVTWV------------------ 183
R V+SW+AMVAGY NC +A F + E N +T +
Sbjct: 317 RTVVSWTAMVAGYVQNCFFGEAIAVFGAVVAEGVLPNEITLISFLPCLQGQEWLTAGEMV 376
Query: 184 -----------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
A++A YGKCG V AK +FD ++ W M Y QN
Sbjct: 377 HGFALKLRFDANVPLLNALVAMYGKCGSVLSAKGLFDGMATRTLVSWNTMVAMYEQNSDG 436
Query: 227 KAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNAL 286
AI+ ++ M E V V +V +SAC + G +E + + D + N L
Sbjct: 437 VQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALETGKWVHELARSHGLDNDARIGNVL 496
Query: 287 IHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
+ M++KCG + A F ++ V+S+S+MI+A+A+HG+ QEAL +F M+ EG++PN
Sbjct: 497 VDMYAKCGEIAYAREVFDSLREPGVVSWSAMISAYANHGEHQEALKLFSLMKGEGVKPNS 556
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
T VL AC H GLV++G K F + + + P EH CM+D+LGR+G+L +A+ +I
Sbjct: 557 FTVTAVLVACGHSGLVDEGLKHFNSIAMEYQMSPTLEHYACMLDMLGRAGRLVEAYEIIR 616
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKD 466
D WGA LG C++H N EL E A L + G L+AN+Y G +D
Sbjct: 617 GMSVQPDKCVWGAFLGGCRLHCNLELAEFVANDLFQSGSNDVTFYVLMANMYFEAGMLED 676
Query: 467 SEIVKMMISETEKKKSPGCSWI 488
+E ++ + E E KK+ G S +
Sbjct: 677 AERMRRAMKEMELKKTAGHSSV 698
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 243/448 (54%), Gaps = 15/448 (3%)
Query: 45 LQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSG- 103
L + + A F+Q+ + + W S+I + + +++ +++KM R +L+
Sbjct: 221 LHMQVGQMDLAMAQFEQMAE-RDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDR 279
Query: 104 FTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGN 163
FT +SVL+ACA + L C +I + + + + I +A+++ Y+ CG
Sbjct: 280 FTLASVLSACANLEKL-----CIGEQI-----HSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 164 MKAAKEFYDRMTEKNSVT--WVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
++ A+ ++ K+ + A++ GY K G++ EAK +FD + + D W AM V Y
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYE 389
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
Q+G AI +++ M E R + + +S + L + + + +
Sbjct: 390 QHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVS 449
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIK-NKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
VSNALI M++K G + A R F I+ +D +S++SMI A A HG ++EAL++F M E
Sbjct: 450 VSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
G+ P+ +T++GV +AC+H GLV G + F++M V I P H CMVDL GR+G L++
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
A I D TWG+LL AC+V+ N +LG++AA LL L PE +G + LAN+Y++
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSA 629
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
GKW+++ ++ + + KK G SWI
Sbjct: 630 CGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 163/320 (50%), Gaps = 35/320 (10%)
Query: 99 VLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGY 158
V+ SG FS L + ++ Y+K G A++LFD M R SW+ +++ Y
Sbjct: 40 VIKSGLVFSVYL---------MNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAY 90
Query: 159 ANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPD----A 210
A G+M ++ EF+DR+ +++SV+W MI GY G+ +A ++ E+ EP
Sbjct: 91 AKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLT 150
Query: 211 SCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKH 270
+ A++ K + K+ + NV +S +++ + C GD MA ++
Sbjct: 151 NVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSN-SLLNMYAKC---GDPMMAKVVFDR 206
Query: 271 VDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEA 330
+ D +++ NA+I +H + G +DLA +F ++ +D+++++SMI+ + G A
Sbjct: 207 M--VVKDISSW--NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRA 262
Query: 331 LDMFLKM-RNEGIEPNQVTFIGVLTACSHGGLVEDGC--KQF--ELMTRVFGIKPLTEHL 385
LDMF KM R+ + P++ T VL+AC++ +E C +Q ++T F I + L
Sbjct: 263 LDMFSKMLRDSMLSPDRFTLASVLSACAN---LEKLCIGEQIHSHIVTTGFDISGIV--L 317
Query: 386 TCMVDLLGRSGQLEKAHSLI 405
++ + R G +E A LI
Sbjct: 318 NALISMYSRCGGVETARRLI 337
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 246/487 (50%), Gaps = 18/487 (3%)
Query: 2 TSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQ 61
T +L+ SK +Q+ Q+H + + T Y+ Y Q + + L + + A QVF Q
Sbjct: 132 TFLFLLQASKFLSQVMQIHCHAIIT----GSFYYGYLQNTLMKIYLENEKMGLAYQVFQQ 187
Query: 62 IPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARV--PSL 119
+ + +I + H +++ +M LG+ FT +L C R+ L
Sbjct: 188 MA-APDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQL 246
Query: 120 LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNS 179
++V + GL+ + N+I +A++ Y C ++ A+ ++ + K++
Sbjct: 247 GKSVHAWIERRGLIKSS----------NLILNNALLDMYVKCKELRIAQSIFNVIVRKDT 296
Query: 180 VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
++W MIAGY K G + A F+++ D W ++ Y Q G +++ M E
Sbjct: 297 ISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAE 356
Query: 240 NVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLA 299
N+ V ++ +SA ++G + + V ++ +A I M+ KCG + A
Sbjct: 357 NIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRA 416
Query: 300 WREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHG 359
F + KDV +++MIT FA HG +AL +F +M+ E + PNQVTF+ VLTACSH
Sbjct: 417 CMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQ-EYVMPNQVTFVAVLTACSHS 475
Query: 360 GLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGA 419
G V G + F M +GI+P EH C+VDLLGRSG+ + +I WGA
Sbjct: 476 GFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGA 535
Query: 420 LLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEK 479
+L AC+ + N E+ EIA + LL+L PEK G LL+NIYA+ G+WK S+ ++ ++
Sbjct: 536 VLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGV 595
Query: 480 KKSPGCS 486
KK+ GCS
Sbjct: 596 KKTAGCS 602
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 244/453 (53%), Gaps = 37/453 (8%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL----------- 119
W LI ++V H +++ + M + T SS+L+A A ++
Sbjct: 1447 WNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCI 1506
Query: 120 ---LEA-------VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG-NMKAAK 168
LE+ +I Y K +DDA+++FDS ER+++ W+ ++A YA G + +A K
Sbjct: 1507 RRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALK 1566
Query: 169 EFYDRMTE---KNSVTWVAMIAGYGKCGEVREAKKVFDEIS----EPDASCWAAMTVCYV 221
FY + N ++W ++I G+ + G+V EAK +F ++ +P+ W +
Sbjct: 1567 LFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLA 1626
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV----EMAAILAKHVDEGCCD 277
Q+G+ AI ++ M++ +R S ++ + ACT + + + + +H E C
Sbjct: 1627 QSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRH--EFCLS 1684
Query: 278 RTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM 337
V+ +L+ M++KCG +D A + F + +K++ Y++MI+A+A HG++ EAL +F +
Sbjct: 1685 VP--VATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHL 1742
Query: 338 RNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQ 397
+ EGIEP+ +TF +L+ACSH GLV +G F M + P+ EH C+V LL R G
Sbjct: 1743 QKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGN 1802
Query: 398 LEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANI 457
L++A LI+ DA G+LL AC+ H ELGE ++HL +L P +GN L+N
Sbjct: 1803 LDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNA 1862
Query: 458 YASMGKWKDSEIVKMMISETEKKKSPGCSWISS 490
YA+ G+W + ++ ++ +K+PGCSWI +
Sbjct: 1863 YAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQT 1895
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 181/419 (43%), Gaps = 78/419 (18%)
Query: 64 KCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSL---- 119
+ + F W +++ ++L + +M GV F +VL AC + +
Sbjct: 1238 RVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGK 1297
Query: 120 -----------------LEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCG 162
+++ Y K G+++DA+++FDSM E+NV++W++M+ GY G
Sbjct: 1298 GVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNG 1357
Query: 163 -NMKAAKEFYDRMTEKNSVTWV-------------AMIAG-------------------- 188
N +A FYD E T V A+I G
Sbjct: 1358 LNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGS 1417
Query: 189 -----YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRI 243
Y K G + +A+ VF + E D W + YVQ+ A+ M +MR EN+R
Sbjct: 1418 SIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRF 1477
Query: 244 SEVAMVGAISACTQLGDVEMAAILAKHVDEG--CCDRTNY-----VSNALIHMHSKCGYL 296
V + +SA ++++ EG C R N V+N++I M++KC +
Sbjct: 1478 DSVTLSSILSASAVTSNIKLG-------KEGHCYCIRRNLESDVVVANSIIDMYAKCERI 1530
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
D A + F +D++ +++++ A+A G S EAL +F +M+ + + PN +++ V+
Sbjct: 1531 DDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGF 1590
Query: 357 SHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAG 415
G V + F M + G +P T ++ L +SG + I+ ++ +AG
Sbjct: 1591 LRNGQVNEAKDMFSQMQSL-GFQPNLITWTTLISGLAQSG---FGYEAILFFQKMQEAG 1645
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 191/460 (41%), Gaps = 110/460 (23%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR+VFD + + K W S+I +V + +++I ++ M G+ + T +S L+A A
Sbjct: 1331 ARKVFDSMVE-KNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASA 1389
Query: 115 RVPSLLE---------------------AVICGYTKIGLMDDAQRLFDSMAERNVISWSA 153
+ +L+E ++I Y+K+GL++DA+ +F M E++V++W+
Sbjct: 1390 NLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNL 1449
Query: 154 MVAGY-----------------------------------ANCGNMKAAKEFY----DRM 174
+++ Y A N+K KE + R
Sbjct: 1450 LISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRN 1509
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
E + V ++I Y KC + +A+KVFD +E D W + Y Q G + A++++
Sbjct: 1510 LESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFY 1569
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M+ ++V + ++ I + G V N + M S G
Sbjct: 1570 QMQFDSVPPNVISWNSVILGFLRNGQV------------------NEAKDMFSQMQS-LG 1610
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLT 354
+ ++I+++++I+ A G EA+ F KM+ GI P+ + VL
Sbjct: 1611 F------------QPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLL 1658
Query: 355 ACS------HGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSL--IM 406
AC+ +G + + E V P+ T +VD+ + G +++A + +M
Sbjct: 1659 ACTDIPSLWYGRAIHGFITRHEFCLSV----PVA---TSLVDMYAKCGSIDEAKKVFHMM 1711
Query: 407 DYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPE 446
K+ + A++ A +H A +HL + G E
Sbjct: 1712 SSKEL---PIYNAMISAYALHGQAVEALALFKHLQKEGIE 1748
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 94/182 (51%)
Query: 177 KNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVM 236
KN ++ Y KC A ++F + + WAA+ + G+++ A+ + M
Sbjct: 1209 KNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEM 1268
Query: 237 RQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYL 296
++ V + + AC L + + + +V + +VS++L+ M+ KCG L
Sbjct: 1269 QENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVL 1328
Query: 297 DLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTAC 356
+ A + F + K+V++++SMI + +G +QEA+D+F MR EGIEP +VT L+A
Sbjct: 1329 EDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSAS 1388
Query: 357 SH 358
++
Sbjct: 1389 AN 1390
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 247/454 (54%), Gaps = 14/454 (3%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMH 95
Y L+ + + G + AR+VFD++P + LW ++R ++ + ++ L +M
Sbjct: 85 YTGSSLMEMYTMLG-RVDIARKVFDEMPS-RALVLWNMMVRCYIRCGRYSAAVALSEQME 142
Query: 96 RLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMV 155
R GV T + + AC+R L L D++ N+ +A++
Sbjct: 143 RSGVTPDRVTLVTAVTACSRARDL-----------SLGRRIHVYMDNVFGFNLPVANALL 191
Query: 156 AGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAA 215
Y ++ A + +++M +N ++W +++GYG G++ +A+ +F++ E D W A
Sbjct: 192 DMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTA 251
Query: 216 MTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC 275
M VQ+G + A+ +++ M+ + V +V ++ C LG ++ + ++ ++
Sbjct: 252 MINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRK 311
Query: 276 CDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFL 335
+ ALI M+SKCG+++ + F R++ +D +++++I A +G++ AL++F
Sbjct: 312 MKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQ 371
Query: 336 KMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRS 395
M+ ++P+ VTFIGVL+AC HGGLV++G KQF M V+ I+P EH +C+V+LLGR+
Sbjct: 372 DMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRA 431
Query: 396 GQLEKAHSLIMDYKDFCDA-GTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
G L++A LI D DA +GALL ACK H N E+ E + + E + T + L+
Sbjct: 432 GLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLM 491
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
+N+YA+ +W+D V+ ++ KK+ GCS I
Sbjct: 492 SNVYATASRWEDVIRVRGKMAHPTVKKTAGCSLI 525
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 50/295 (16%)
Query: 178 NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMR 237
++ T +++ Y G V A+KVFDE+ W M CY++ G AA+ + + M
Sbjct: 83 DAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVALSEQME 142
Query: 238 QENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK----- 292
+ V V +V A++AC++ D+ + + ++D V+NAL+ M++K
Sbjct: 143 RSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDN-VFGFNLPVANALLDMYTKNDCLE 201
Query: 293 --------------------------CGYLDLAWREFSRIKNKDVISYSSMITAFADHGK 326
G LD A F++ K KD+I +++MI A HG
Sbjct: 202 EAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGC 261
Query: 327 SQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG------CKQFEL-MTRVFGIK 379
+EAL +F M+ + +EP++ T + +LT C++ G ++ G +Q ++ + V G
Sbjct: 262 FEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLG-- 319
Query: 380 PLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGE 434
T ++D+ + G +EK+ + + DA W A++ C + N + G
Sbjct: 320 ------TALIDMYSKCGHIEKSLEVFWRMQGR-DATAWTAII--CGLATNGQAGR 365
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/448 (30%), Positives = 233/448 (52%), Gaps = 25/448 (5%)
Query: 50 DNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSV 109
D+L AR++ + + W ++I +V + ++ L +MH LG+ +T++SV
Sbjct: 222 DDLVAARELLEGMTD-HIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSV 280
Query: 110 LNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWS---------AMVAGYAN 160
++A + G IG R + R V+ S A++ Y
Sbjct: 281 ISAASN---------AGLFNIG------RQVHAYVLRTVVQPSGHFVLSVNNALITLYTR 325
Query: 161 CGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCY 220
CG + A+ +D+M K+ V+W A+++G + EA +F E+ W M
Sbjct: 326 CGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGL 385
Query: 221 VQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTN 280
QNG+ + ++++ M+ E + + A GAI++C+ LG ++ L + + D +
Sbjct: 386 AQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSL 445
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
V NALI M+S+CG ++ A F + D +S+++MI A A HG +A+ ++ KM E
Sbjct: 446 SVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKE 505
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEK 400
I P+++TF+ +L+ACSH GLV++G F+ M +GI P +H + ++DLL R+G +
Sbjct: 506 DILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSE 565
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYAS 460
A ++ A W ALL C +H N ELG AA LLEL P++ G L+N+YA+
Sbjct: 566 AKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAA 625
Query: 461 MGKWKDSEIVKMMISETEKKKSPGCSWI 488
+G+W + V+ ++ E KK PGCSWI
Sbjct: 626 LGQWDEVARVRKLMRERGVKKEPGCSWI 653
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 215/501 (42%), Gaps = 86/501 (17%)
Query: 1 MTSKYLVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQ--LPGDNLSYARQV 58
M ++YL S T + + VH+++L + KP + + RL+ N+ YAR +
Sbjct: 1 MGNRYLAQLSHT-SFARAVHAHILTSGFKP------FPLIINRLIDHYCKSFNIPYARYL 53
Query: 59 FDQIPKCKTQFLWTSL----------------------IRNHVL---------HAHFRQS 87
FD+IPK T L IR+ V H+H +
Sbjct: 54 FDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHA 113
Query: 88 IL-LYAKMHRLGVLTSGFTFSSVLNACARVP---SLLEAVICGYTKIGLMDDAQRLFDSM 143
L L+ +M RLG + FTFSSVL A + + + + + C K G + L M
Sbjct: 114 ALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALM 173
Query: 144 AERNVISWSAMVAGYANCGNMKAAKEFYDRMT--EKNSVTWVAMIAGYGKCGEVREAKKV 201
+ + S +V +C M AA++ +D ++ W +IAGY + ++ A+++
Sbjct: 174 SCYVSCASSPLVN---SCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAAREL 230
Query: 202 FDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDV 261
+ +++ A W AM YV G+ + A ++ + M +++ E ISA + G
Sbjct: 231 LEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLF 290
Query: 262 EMAAILAKHVDEGCCDRTNY----VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSS- 316
+ + +V + + V+NALI ++++CG L A R F ++ KD++S+++
Sbjct: 291 NIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAI 350
Query: 317 ------------------------------MITAFADHGKSQEALDMFLKMRNEGIEPNQ 346
MI+ A +G +E L +F +M+ EG+EP
Sbjct: 351 LSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCD 410
Query: 347 VTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIM 406
+ G + +CS G +++G +Q G ++ + R G +E A ++ +
Sbjct: 411 YAYAGAIASCSVLGSLDNG-QQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFL 469
Query: 407 DYKDFCDAGTWGALLGACKVH 427
+ D+ +W A++ A H
Sbjct: 470 TMP-YVDSVSWNAMIAALAQH 489
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 209/397 (52%), Gaps = 46/397 (11%)
Query: 135 DAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWV----------- 183
DA+R FD + + N + +AM +GY + + E + M +S + V
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 184 ------------------------------AMIAGYGKCG--EVREAKKVFDEISEPDAS 211
M+ Y K G ++ A+KVFD + E D
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVV 120
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQ--ENVRISEVAMVGAISACTQLGDVEMAAILAK 269
W +M Y QNG + AI +Y M ++ + VA+ + AC G ++ +
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
V + YV +++ M+SKCG +++A R F +IK K+++S+S+MIT + HG+ QE
Sbjct: 181 QVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQE 240
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMV 389
AL++F +M+ G+ PN +TFI VL ACSH GL+++G + M + FGI+ EH CMV
Sbjct: 241 ALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMV 300
Query: 390 DLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTG 449
DLLGR+G L++A+SLI + K DA WGALL AC++H N EL E++ + L EL +G
Sbjct: 301 DLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSG 360
Query: 450 NSALLANIYASMGKWKDSEIVKMMISETEKKKSPGCS 486
LL+NIYA G WKD E +++++ +K PG S
Sbjct: 361 YYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYS 397
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 38/287 (13%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRL--GVLTSGFTFSS 108
+L AR+VFD + + W S+I + + ++I LY+KM + G+ + S+
Sbjct: 104 DLEVARKVFDTMERDVVS--WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSA 161
Query: 109 VLNACARVPS---------------LLEAVICG------YTKIGLMDDAQRLFDSMAERN 147
VL ACA + L E V G Y+K G ++ A R F + E+N
Sbjct: 162 VLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN 221
Query: 148 VISWSAMVAGYANCGNMKAAKEFYDRMTEK----NSVTWVAMIAGYGKCGEVREAKKVFD 203
++SWSAM+ GY G + A E + M N +T+++++A G + E + ++
Sbjct: 222 ILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYN 281
Query: 204 EI-SEPDASCWAAMTVCYVQ-NGYAKAAIEMYKVMRQENVRISEVAMVGA-ISACTQLGD 260
+ E C V G A E Y ++++ V+ + A+ GA +SAC +
Sbjct: 282 AMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK-PDAAIWGALLSACRIHKN 340
Query: 261 VEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
VE+A + K + E + Y L +++++ G W++ RI+
Sbjct: 341 VELAEMSVKRLFELDASNSGYYV-LLSNIYAEAGM----WKDVERIR 382
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/498 (29%), Positives = 242/498 (48%), Gaps = 63/498 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
LS A ++F+ +P W +I V + ++ LL+++M GV TF+S L
Sbjct: 124 LSDALKLFNTMPDTNV-VTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLP 182
Query: 112 ACARVPSLLE-------------------------------------------------- 121
+ SL +
Sbjct: 183 SVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVV 242
Query: 122 --AVICGYTKIGLMDDAQRLFDSMAER----NVISWSAMVAGYANCGNMKAAKEFYDR-- 173
A+I GY GL +DA +F + E N ++ ++++ A + KE +
Sbjct: 243 CTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANIL 302
Query: 174 ---MTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
+ E+ V A++ Y KCG + A ++F + E DA CW A+ QNG + AI
Sbjct: 303 KHGLDERRHVG-SAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAI 361
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++++ M +E + V++ A+SAC L + + + +G D + +ALI M+
Sbjct: 362 DLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMY 421
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFI 350
KCG L +A F ++ K+ +S++S+I A+ HG + +L +F KM +GI+P+ VTF+
Sbjct: 422 GKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFL 481
Query: 351 GVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKD 410
+L+AC H G V+ G + F MT +GI EH C+VDL GR+G+L +A I +
Sbjct: 482 TILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPF 541
Query: 411 FCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIV 470
D G WG LLGAC+VH N EL E+A+R LL+L PE +G LL+N++A G+W +
Sbjct: 542 SPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKI 601
Query: 471 KMMISETEKKKSPGCSWI 488
+ ++ + +K PG SWI
Sbjct: 602 RSLMKKRGVQKVPGYSWI 619
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 211/464 (45%), Gaps = 67/464 (14%)
Query: 44 LLQLPGDN--LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLT 101
L++L +N + AR++FD++P K LW ++ V ++ ++ M
Sbjct: 13 LIKLYAENGCIEDARRLFDKMPN-KDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKP 71
Query: 102 SGFTFSSVLNACARV---------------------PSLLEAVICGYTKIGLMDDAQRLF 140
+ TF+SVL+ CA P + A++ Y+K G + DA +LF
Sbjct: 72 NSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLF 131
Query: 141 DSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM----TEKNSVTWV------------- 183
++M + NV++W+ M+AG+ G M A + M +S+T+
Sbjct: 132 NTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLK 191
Query: 184 ----------------------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYV 221
A+I Y KC +V A K+F + + D A+ YV
Sbjct: 192 QGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYV 251
Query: 222 QNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNY 281
NG A+E+++ + +E + + V + + AC L + + L ++ + D +
Sbjct: 252 LNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRH 311
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V +A++ M++KCG LDLA++ F R+ KD + ++++IT + +GK QEA+D+F +M EG
Sbjct: 312 VGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREG 371
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTR-VFGIKPLTEHLTCMVDLLGRSGQLEK 400
+ + V+ L+AC++ + G M + F + E + ++D+ G+ G L
Sbjct: 372 LSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAE--SALIDMYGKCGNLSV 429
Query: 401 AHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELG 444
A + D + +W +++ A H + E+ +LE G
Sbjct: 430 ARC-VFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDG 472
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 152 SAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDAS 211
S+++ YA G ++ A+ +D+M K+ V W M+ G+ KCGE A KVF++
Sbjct: 11 SSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFED------- 63
Query: 212 CWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILA--K 269
M C + ++ + V + A A ++ G+ +++
Sbjct: 64 ----MRNCQT---------------KPNSITFASVLSICASEALSEFGNQLHGLVISCGF 104
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
H D V+NAL+ M+SK G L A + F+ + + +V++++ MI F +G E
Sbjct: 105 HFDP-------LVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDE 157
Query: 330 ALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
A +F +M + G+ P+ +TF L + + ++ G
Sbjct: 158 ASLLFSEMISAGVSPDSITFASFLPSVTESASLKQG 193
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 12 TFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLW 71
T N K++H+ +LK D+ + ++ + G L A Q+F ++P+ K W
Sbjct: 290 TLNLGKELHANILK---HGLDERRHVGSAIMDMYAKCG-RLDLAYQIFRRMPE-KDAVCW 344
Query: 72 TSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIG 131
++I N + +++I L+ +M R G+ + S+ L+ACA +P+L I
Sbjct: 345 NAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMI- 403
Query: 132 LMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGK 191
+ FDS V + SA++ Y CGN+ A+ +D M EKN V+W ++IA YG
Sbjct: 404 -----KGAFDS----EVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGS 454
Query: 192 CGEVREAKKVFDEISE----PDASCWAAMTVCYVQNGYAKAAIEMYKVMRQE 239
G + + +F ++ E PD + + G I+ ++ M +E
Sbjct: 455 HGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEE 506
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 281 YVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNE 340
+V ++LI ++++ G ++ A R F ++ NKD + ++ M+ F G+ A+ +F MRN
Sbjct: 8 FVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNC 67
Query: 341 GIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRV-FGIKPLTEHLTCMVDLLGRSGQLE 399
+PN +TF VL+ C+ L E G + L+ F PL + +V + + GQL
Sbjct: 68 QTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMYSKFGQLS 125
Query: 400 KAHSLIMDYKDFCDAGTWGALLGA 423
A L D + TW ++
Sbjct: 126 DALKLFNTMPD-TNVVTWNGMIAG 148
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 94/235 (40%), Gaps = 28/235 (11%)
Query: 17 KQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFLWTSLIR 76
K +HS+++K D + LI + G NLS AR VFD + + K + W S+I
Sbjct: 396 KAIHSFMIK---GAFDSEVFAESALIDMYGKCG-NLSVARCVFDMMRE-KNEVSWNSIIA 450
Query: 77 NHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDA 136
+ H H S+ L+ KM G+ TF ++L+AC G +D
Sbjct: 451 AYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHA--------------GQVDKG 496
Query: 137 QRLFDSMAERNVIS-----WSAMVAGYANCGNMKAAKEFYDRMT-EKNSVTWVAMIAG-- 188
+ F M E I ++ +V + G + A E M + W ++
Sbjct: 497 IQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACR 556
Query: 189 -YGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVR 242
+G A + ++ ++ C+ ++ + G + ++ +M++ V+
Sbjct: 557 VHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQ 611
>gi|10086462|gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thaliana]
Length = 539
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/499 (32%), Positives = 252/499 (50%), Gaps = 70/499 (14%)
Query: 6 LVPRSKTFNQLKQVHSYLLKTLTKPHDQYHYY-AQFLIRLLQLPGDNLSYARQVFDQIPK 64
++ + +F+Q+KQ+ S+ L T H Q + ++ L R P +LS+A Q+F IPK
Sbjct: 9 MIQKCVSFSQIKQLQSHFL---TAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPK 65
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMH----------RLGVLTSGFTFSSVLNACA 114
T W ++IR +H + Y M R+ LT FT L ACA
Sbjct: 66 PLTND-WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFT----LKACA 120
Query: 115 RV--PSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYD 172
R S ++ + C + GL D
Sbjct: 121 RALCSSAMDQLHCQINRRGLSAD------------------------------------- 143
Query: 173 RMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
S+ ++ Y K G++ A K+FDE+ D + W A+ V A A+E+
Sbjct: 144 ------SLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMEL 197
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
YK M E +R SEV +V A+ AC+ LGDV+ +++ G + VSNA I M+SK
Sbjct: 198 YKRMETEGIRRSEVTVVAALGACSHLGDVKEG----ENIFHGYSNDNVIVSNAAIDMYSK 253
Query: 293 CGYLDLAWREFSRIKNK-DVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
CG++D A++ F + K V+++++MIT FA HG++ AL++F K+ + GI+P+ V+++
Sbjct: 254 CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
LTAC H GLVE G F M G++ +H C+VDLL R+G+L +AH +I
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMI 372
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
D W +LLGA +++ + E+ EIA+R + E+G G+ LL+N+YA+ G+WKD V+
Sbjct: 373 PDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVR 432
Query: 472 MMISETEKKKSPGCSWISS 490
+ + KK PG S+I +
Sbjct: 433 DDMESKQVKKIPGLSYIEA 451
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 238/447 (53%), Gaps = 30/447 (6%)
Query: 48 PGDNLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFS 107
PG L+ AR++FD IP ++ N +L HF G + +
Sbjct: 54 PG-RLADARRLFDSIPHPD------AVSYNTLLSCHFA-----------CGDIDGAWRVF 95
Query: 108 SVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAA 167
S + R + ++ G +K G +++A+ +F +M RN +SW+AMVA A+ G+M AA
Sbjct: 96 STMPV--RDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAA 153
Query: 168 KEFYDRMTEK-NSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYA 226
+ + EK +++ W AM++GY G V++A + F + + W A+ YV+N A
Sbjct: 154 ENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRA 213
Query: 227 KAAIEMYKVMRQEN-VRISEVAMVGAISACTQLGDVEMAAILAKHVDEGC----CDRTNY 281
A+ ++K M ++ V+ + + + C+ L A + V + C R+
Sbjct: 214 GDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLS----ALGFGRQVHQWCMKLPLGRSIT 269
Query: 282 VSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEG 341
V +L+ M+ KCG LD A + F + KD++++++MI+ +A HG ++A+ +F KM++EG
Sbjct: 270 VGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEG 329
Query: 342 IEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKA 401
+ P+ +T + VLTAC H GL + G + FE M + I+P +H +CMVDLL R+G LE+A
Sbjct: 330 VVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERA 389
Query: 402 HSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASM 461
++I +G LL AC+V+ N E E AAR L+E P+ G LANIYA
Sbjct: 390 VNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVA 449
Query: 462 GKWKDSEIVKMMISETEKKKSPGCSWI 488
+W D V+ + + K+PG SW+
Sbjct: 450 NRWDDVSRVRRWMKDNAVVKTPGYSWM 476
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 56/306 (18%)
Query: 163 NMKAAKEFYDRMTEKNSVTWVAMIAGYGKC---GEVREAKKVFDEISEPDA-------SC 212
++ A+E + K + T+ ++AGY K G + +A+++FD I PDA SC
Sbjct: 22 DLAGAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSC 81
Query: 213 ------------------------WAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAM 248
W M +NG + A M++ M N +S AM
Sbjct: 82 HFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNA-VSWNAM 140
Query: 249 VGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS-NALIHMHSKCGYLDLAWREFSRIK 307
V A ++ GD+ A L ++ E +T+ + A++ + G + A F +
Sbjct: 141 VAARASS---GDMGAAENLFRNAPE----KTDAILWTAMVSGYMDTGNVQKAMEYFRAMP 193
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGI-EPNQVTFIGVLTACSHGGLVEDGC 366
++++S+++++ + + ++ +AL +F M + I +PN T VL CS+ + G
Sbjct: 194 VRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGR 253
Query: 367 KQFELMTRVFGIKPLTEHLTCMVDLLG---RSGQLEKAHSLI--MDYKDFCDAGTWGALL 421
+ + ++ PL +T LL + G L+ A L M KD W A++
Sbjct: 254 QVHQWCMKL----PLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIV---AWNAMI 306
Query: 422 GACKVH 427
H
Sbjct: 307 SGYAQH 312
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 237/439 (53%), Gaps = 14/439 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L +R+ FD++ + W S+I + R++ L+ +M R G L FT +S+L
Sbjct: 95 SLGDSRRFFDEMAG-RNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFTLASLL 153
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEF 170
AC++ G + G + L S + ++I A+V Y+ CG++ A+
Sbjct: 154 LACSQE---------GNLEFGRLVHCLMLV-SGSPVDLILGGALVDMYSKCGDLCMARRC 203
Query: 171 YDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAI 230
++ M K+ V+W +M+ K G V A+ FD + E + W M CYVQ G A+
Sbjct: 204 FEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEAL 263
Query: 231 EMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMH 290
++YK M+ E +V +SAC ++GD+ + ++ ++ + + + N+L+ M+
Sbjct: 264 DLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMY 323
Query: 291 SKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM-RNEGIEPNQVTF 349
+KCG +D A R F + N++V+S++ +I A HG++ +A+ F M RN P+ +TF
Sbjct: 324 AKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVRN--TSPDGITF 381
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ +L++CSHGGL+E G FE M V+ +K EH CMVDLLGR G LEKA LI +
Sbjct: 382 VALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMP 441
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
D WGALLGAC++H N ++G+ + LLEL G L++N+ +W+D +
Sbjct: 442 MKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKR 501
Query: 470 VKMMISETEKKKSPGCSWI 488
++ ++ E +K G S I
Sbjct: 502 LRKLMKERGTRKDMGVSSI 520
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 201 VFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGD 260
+FD I +PD + +T Y + + A+ +++ M + V +E + + ACT+
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 261 VEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMIT 319
+ A A+ + G + +V+NAL+H ++ G L + R F + ++V+S++SMI
Sbjct: 61 WDNALAVHGVALKLGFVGQV-FVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIG 119
Query: 320 AFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
+A G ++EA +F +MR +G ++ T +L ACS G +E G
Sbjct: 120 GYAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFG 165
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 239/439 (54%), Gaps = 14/439 (3%)
Query: 51 NLSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVL 110
+L AR+V D++P+ + + W +L+ H + ++++ LY++M G + FSSVL
Sbjct: 327 DLEGARRVLDEMPE-RNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVL 385
Query: 111 NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMA-ERNVISWSAMVAGYANCGNMKAAKE 169
ACA + L + G Q L MA NV SA++ Y C + A+
Sbjct: 386 GACASLQDL---------RSGRKIHNQTL--KMACSNNVFVSSALIDMYCKCKQLPDAQM 434
Query: 170 FYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAA 229
+ + +KN V W ++I+GY ++ EA+++F ++ + + W ++ Y QN A
Sbjct: 435 IFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDA 494
Query: 230 IEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHM 289
++ + M E+ + AC L +EM ++ + + + +V AL M
Sbjct: 495 LKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDM 554
Query: 290 HSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTF 349
++K G LD + R F + ++ +++++MI A++G ++E++ +F M + GI PN+ TF
Sbjct: 555 YAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTF 614
Query: 350 IGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYK 409
+ +L ACSH GLVE FE+M + GI P +H TCMVD+L R+G L +A L++ +
Sbjct: 615 LAILFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIE 673
Query: 410 DFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEI 469
+A +W ALL AC ++ N E+GE AA+ L EL + T LL+N+YAS GKWKD+
Sbjct: 674 SKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAE 733
Query: 470 VKMMISETEKKKSPGCSWI 488
+++++ KK GCSW+
Sbjct: 734 MRILMKGINLKKDGGCSWV 752
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 176/398 (44%), Gaps = 43/398 (10%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
A +++ Q P C F +T++I VL+ + ++ ++ +M GV + T SV+ AC
Sbjct: 198 AVELYRQCPLCSVPF-FTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACI 256
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
A+ + +GL + L ++ RN +++ Y G+ AA+ +D M
Sbjct: 257 GAGEFDLAM----SIVGLAMKSNLLDKNLGVRN-----SLITLYLRKGDADAARRMFDEM 307
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
++ V+W A++ Y + G++ A++V DE+ E + W + + Q G AK A+ +Y
Sbjct: 308 EVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYS 367
Query: 235 VMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCG 294
M + R + + AC L D+ + + C +VS+ALI M+ KC
Sbjct: 368 QMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCK 427
Query: 295 YLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKM--RN------------- 339
L A F + K+++ ++S+I+ ++++ K EA ++F KM RN
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQ 487
Query: 340 ----------------EGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTE 383
G P ++TF VL AC+ +E G K GIK
Sbjct: 488 NRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMG-KMVHAKIIKLGIKESIF 546
Query: 384 HLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
T + D+ +SG L+ + + + D W A++
Sbjct: 547 VGTALSDMYAKSGDLDSSKRVFYEMPKRNDVA-WTAMI 583
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 63/263 (23%)
Query: 127 YTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMI 186
+ K G + A+RLFD M ER+V+S++ MV G+++ A E Y + + + AMI
Sbjct: 158 HVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFFTAMI 217
Query: 187 AGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEV 246
AG +V N K A+ ++ M V +E+
Sbjct: 218 AG-------------------------------FVLNELPKDALGVFHEMLSCGVSPNEI 246
Query: 247 AMVGAISACTQLGDVEMA-AILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
+V I AC G+ ++A +I+ + D+ V N+LI ++ + G D A R F
Sbjct: 247 TLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDE 306
Query: 306 IKNKDVISYSSMITAFAD-------------------------------HGKSQEALDMF 334
++ +DV+S+++++ +A+ G ++EA+ ++
Sbjct: 307 MEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLY 366
Query: 335 LKMRNEGIEPNQVTFIGVLTACS 357
+M +G PN F VL AC+
Sbjct: 367 SQMLADGCRPNISCFSSVLGACA 389
>gi|414884999|tpg|DAA61013.1| TPA: hypothetical protein ZEAMMB73_343744 [Zea mays]
Length = 557
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 235/437 (53%), Gaps = 22/437 (5%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACA 114
AR++ IP+ T W +L+R+ + + L+ +M ++T ++S+L+
Sbjct: 140 ARRLLADIPRPDT-VTWNTLLRSFLRMGLLPAARRLFDEMPERDLVT----YNSMLS--- 191
Query: 115 RVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRM 174
GY G + +A+ LFD M ER+V++W++M+AGYA G+M++AK +D M
Sbjct: 192 -----------GYAAEGDIANARELFDGMPERDVVTWNSMLAGYAQRGDMESAKRLFDVM 240
Query: 175 TEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYK 234
++ V+W +M+ GY + G++ + VFD + W + Y + + ++
Sbjct: 241 PVRDVVSWNSMLDGYAQTGDIEMTRMVFDGMPRRSTVSWNVVLALYAKVKDWHECLNLFD 300
Query: 235 VMRQ-ENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVS--NALIHMHS 291
M + +E V ++AC LGD+E + V E V A++ M++
Sbjct: 301 AMMAVGGSKPNEKTFVSVLTACGHLGDLERGRWVHHLVHESWERLLPDVLLLTAMMTMYA 360
Query: 292 KCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIG 351
KCG + A F + + V S++SMI + HG S++AL++F++M G +PN+ TFI
Sbjct: 361 KCGVMGTAKEIFDLMTERSVASWNSMIIGYGLHGYSEKALELFMEMEKNGPQPNETTFIC 420
Query: 352 VLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDF 411
+L++C+HGGLV +G F+ M R + I+P EH CM+DLLGR+G L + +LI + +
Sbjct: 421 ILSSCAHGGLVLEGWWCFDRMVRFYNIEPKAEHFGCMMDLLGRAGLLRDSENLINNLQAK 480
Query: 412 CDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVK 471
WGAL+ A + +++LGE L+E+ P + + LL+NIYA+ G+W D E V+
Sbjct: 481 VSPALWGALISASRTQDSSKLGEFIGTKLIEMKPTEFSSYVLLSNIYATEGRWDDVEKVR 540
Query: 472 MMISETEKKKSPGCSWI 488
++ E +K G S +
Sbjct: 541 KVMKEKVVEKDVGMSLV 557
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 244/454 (53%), Gaps = 14/454 (3%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ-FLWTSLIRNHVLHAHFRQSILLYAKM 94
Y L+++ L G + AR VFD+ +CK F W +I + + +SI L +M
Sbjct: 171 YVQNALVKMYSLCG-LMDMARGVFDR--RCKEDVFSWNLMISGYNRMKEYEESIELLVEM 227
Query: 95 HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
R V + T VL+AC++V + +C + + + E ++ +A+
Sbjct: 228 ERNLVSPTSVTLLLVLSACSKVK---DKDLCKRVH-------EYVSECKTEPSLRLENAL 277
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
V YA CG M A + M ++ ++W +++ GY + G ++ A+ FD++ D W
Sbjct: 278 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
M Y++ G ++E+++ M+ + E MV ++AC LG +E+ + ++D+
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
V NALI M+ KCG + A + F + +D ++++M+ A++G+ QEA+ +F
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 457
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
+M++ I+P+ +T++GVL+AC+H G+V+ K F M I+P H CMVD+LGR
Sbjct: 458 FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 517
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+G +++A+ ++ ++ WGALLGA ++H + + E+AA+ +LEL P+ ALL
Sbjct: 518 AGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL 577
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
NIYA +WKD V+ I + KK+PG S I
Sbjct: 578 CNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 194/445 (43%), Gaps = 82/445 (18%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
KT +Q KQ+HS + P+ + + + G ++SYA ++F +IP+ +
Sbjct: 45 KTTDQFKQLHSQSITRGVAPNPTFQ--KKLFVFWCSRLGGHVSYAYKLFVKIPEPDV-VV 101
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL---EAVICGY 127
W ++I+ + + LY M + GV TF +LN R L + + C
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
K GL N+ +A+V Y+ CG M A+ +DR +++ +W MI+
Sbjct: 162 VKFGL------------GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
GY + E E +IE+ M + V + V
Sbjct: 210 GYNRMKEYEE-------------------------------SIELLVEMERNLVSPTSVT 238
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++ +SAC+++ D ++ + ++V E + + + NAL++ ++ CG +D+A R F +K
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 308 NKDVISYSSMITAFADHGKSQ-------------------------------EALDMFLK 336
+DVIS++S++ + + G + E+L++F +
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M++ G+ P++ T + VLTAC+H G +E G + + IK ++D+ + G
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALL 421
EKA + D D D TW A++
Sbjct: 418 CSEKAQKVFHDM-DQRDKFTWTAMV 441
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 233/424 (54%), Gaps = 18/424 (4%)
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAV---ICGY 127
WTS I + ++ ++ M GV + TF ++L+ C PS EA+ + GY
Sbjct: 39 WTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEALGDLLHGY 98
Query: 128 T-KIGLMDDAQRLFDSMAERN-VISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAM 185
K+GL +RN V+ +A++ Y+ G +K A+ +D M +KNSVTW M
Sbjct: 99 ACKLGL------------DRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTM 146
Query: 186 IAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISE 245
I GY + G+V A K+FD++ E D W AM +V G+ + A+ ++ M+ V+
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDY 206
Query: 246 VAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSR 305
VA++ A++ACT LG + + ++V VSN+LI ++ +CG ++ A + F +
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDK 266
Query: 306 IKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDG 365
++ + V+S++S+I FA +G + E+L F KM+ E +P+ VTF G LTACSH GLVE+G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEG 326
Query: 366 CKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACK 425
+ F++M + I P EH C+VDL R+G+LE A L+ + G+LL AC+
Sbjct: 327 LRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACR 386
Query: 426 VH-VNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKSPG 484
H N L E +HL +L + N +L+N+YA+ GKW+ + ++ + KK PG
Sbjct: 387 NHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 485 CSWI 488
S I
Sbjct: 447 FSSI 450
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 308 NKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCK 367
+++ +S++S IT +G+ EA F MR G+EPN +TFI +L+ C G G +
Sbjct: 33 SENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGC---GDFPSGSE 89
Query: 368 QFELMTRVFGIKPLTE--HL---TCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALL 421
+ + K + H+ T ++ + + G+++KA + DY + ++ TW ++
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARC-VFDYMEDKNSVTWNTMI 147
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 25/196 (12%)
Query: 52 LSYARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLN 111
+ +ARQVFD++ K +T W S+I + + +S++ + KM TF+ L
Sbjct: 257 VEFARQVFDKMEK-RTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALT 315
Query: 112 ACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVIS-----WSAMVAGYANCGNMKA 166
AC+ V GL+++ R F M IS + +V Y+ G ++
Sbjct: 316 ACSHV--------------GLVEEGLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLED 361
Query: 167 AKEFYDRMTEK-NSVTWVAMIAGYGKCG-EVREAKKVFDEISEPDA---SCWAAMTVCYV 221
A + M K N V +++A G A+K+ +++ + S + ++ Y
Sbjct: 362 ALKLVQSMPMKPNEVVIGSLLAACRNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYA 421
Query: 222 QNGYAKAAIEMYKVMR 237
+G + A +M + M+
Sbjct: 422 ADGKWEGASKMRRKMK 437
>gi|449440231|ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
gi|449521725|ref|XP_004167880.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 521
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 255/504 (50%), Gaps = 48/504 (9%)
Query: 9 RSKTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQL----PGDNLSYARQVFDQIPK 64
R +L+Q ++++K ++ + + +L+ P +L +A +F Q
Sbjct: 8 RLSCIKELEQAQAFIVKA------GFYNHIPIITKLIAFSSLSPLGSLPHACALF-QETS 60
Query: 65 CKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLE--- 121
F+ ++IR + +++L+Y +M R+ V + FT++ VL ACAR E
Sbjct: 61 MDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDSDHFTYNFVLRACARAIKCTEMDD 120
Query: 122 --------------------------------AVICGYTKIGLMDDAQRLFDSMAERNVI 149
+++ Y+ GL+ A+ +F+ M + +
Sbjct: 121 QCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAV 180
Query: 150 SWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPD 209
SW+ M++ Y + K+A + M + N+V+W ++A Y + + A+KVF+E+ E D
Sbjct: 181 SWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERD 240
Query: 210 ASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAK 269
W ++ YV K A++++ M+Q N+R +EV + + AC +LG +E+ +
Sbjct: 241 VVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHD 300
Query: 270 HVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQE 329
+ E Y+ NA++ M++KCG L LA F+ ++ K V +++MI A HG +
Sbjct: 301 SLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCER 360
Query: 330 ALDMFLKMRNEGIE--PNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTC 387
AL+MF M+ E + PN++TFI +L ACSH GL+ +G F LM + I P +H C
Sbjct: 361 ALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGC 420
Query: 388 MVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEK 447
M+DLL R G LE+A+ +I + W LLG C++H + ELGE + R L EL P K
Sbjct: 421 MIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGK 480
Query: 448 TGNSALLANIYASMGKWKDSEIVK 471
G+ LL+NIYA +W D E ++
Sbjct: 481 DGDYVLLSNIYAEEERWDDVERLR 504
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 42/271 (15%)
Query: 1 MTSKYLVPRSKTFNQLKQVHSY-----LLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYA 55
MT K V + + +VH Y LL+++ P + L R ++L +NL A
Sbjct: 174 MTVKTAVSWNIMMSAYNRVHDYKSADVLLESM--PQTNAVSWNTLLARYIRL--NNLVAA 229
Query: 56 RQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACAR 115
R+VF+++P+ + W S+I +V ++ ++ L+ M + + + TF S+L ACA
Sbjct: 230 RKVFEEMPE-RDVVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAE 288
Query: 116 VPSLL---------------------EAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
+ +L A++ Y K G + A +F+ M + V W+AM
Sbjct: 289 LGALEIGKKIHDSLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAM 348
Query: 155 VAGYANCGNMKAAKEFYDRMT------EKNSVTWVAMIAGYGKCGEVREAKKVFDEISE- 207
+ G A G+ + A E +D M + N +T++A++ G + E + F +
Sbjct: 349 IMGLAVHGHCERALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTK 408
Query: 208 ----PDASCWAAMTVCYVQNGYAKAAIEMYK 234
PD + M + G+ + A M K
Sbjct: 409 YKIMPDLKHYGCMIDLLSRWGFLEEAYVMIK 439
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 249/503 (49%), Gaps = 77/503 (15%)
Query: 55 ARQVFDQIPKCKTQFLWTSLIRNHVLHAHFRQSILLYAKM--HRLGVLTSGFTFSSVL-- 110
AR +FD++P+ + W ++I + ++ L+ M G + F F+SVL
Sbjct: 170 ARDLFDEMPE-RNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSA 228
Query: 111 -------------------NACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISW 151
N + S+ A++ Y K G ++DA + F+ +N I+W
Sbjct: 229 LTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITW 288
Query: 152 SAMVAGYANCGNM-KAAKEFYD-----RMTEKNSVTWV---------------------- 183
SAMV G+A G+ KA K FYD + + ++ V
Sbjct: 289 SAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLK 348
Query: 184 -----------AMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEM 232
A++ Y KCG + +A+K F+ I +PD W ++ YVQNG + A+ +
Sbjct: 349 LGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNL 408
Query: 233 YKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSK 292
Y M+ V +++ M + AC+ L ++ + + + + +AL M++K
Sbjct: 409 YGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAK 468
Query: 293 CGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGV 352
CG LD +R F R+ +DVIS+++MI+ + +G+ E L++F KM EG +P+ VTF+ +
Sbjct: 469 CGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNL 528
Query: 353 LTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFC 412
L+ACSH GLV+ G F++M F I P EH CMVD+L R+G+L +A K+F
Sbjct: 529 LSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEA-------KEFI 581
Query: 413 DAGT-------WGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWK 465
++ T W LL A K H + +LG A L+ELG ++ LL++IY ++GKW+
Sbjct: 582 ESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWE 641
Query: 466 DSEIVKMMISETEKKKSPGCSWI 488
D E V+ M+ K PGCSWI
Sbjct: 642 DVERVRGMMKARGVTKEPGCSWI 664
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 155/376 (41%), Gaps = 79/376 (21%)
Query: 81 HAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLF 140
H R+ L+A++ ++T F+ + + N+ +I Y K A +F
Sbjct: 23 HKQLRKGRALHARI----LVTGSFSSTQIANS----------LINLYAKCSHFSKANLVF 68
Query: 141 DSMAERNVISWSAMVAGYAN-------------------------------CGNMKAAKE 169
DS+ ++V+SW+ ++ ++ G AA
Sbjct: 69 DSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAAST 128
Query: 170 FYDRMTEKNS-------------VTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWAAM 216
D + + +++ Y K G V EA+ +FDE+ E +A WA M
Sbjct: 129 LSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATM 188
Query: 217 TVCYVQNGYAKAAIEMYKVMRQENV--RISEVAMVGAISACT---------QLGDVEMAA 265
Y A A E++K+MR E +E +SA T Q+ + M
Sbjct: 189 ISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKN 248
Query: 266 ILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHG 325
L V V+NAL+ M+ KCG L+ A + F NK+ I++S+M+T FA G
Sbjct: 249 GLVCIVS---------VANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFG 299
Query: 326 KSQEALDMFLKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHL 385
S +AL +F M G P++ T +GV+ ACS + +G +Q + G + L
Sbjct: 300 DSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEG-RQMHGYSLKLGYELQLYVL 358
Query: 386 TCMVDLLGRSGQLEKA 401
+ +VD+ + G + A
Sbjct: 359 SALVDMYAKCGSIVDA 374
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 244/454 (53%), Gaps = 14/454 (3%)
Query: 36 YYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQ-FLWTSLIRNHVLHAHFRQSILLYAKM 94
Y L+++ L G + AR VFD+ +CK F W +I + + +SI L +M
Sbjct: 171 YVQNALVKMYSLCG-LMDMARGVFDR--RCKEDVFSWNLMISGYNRMKEYEESIELLVEM 227
Query: 95 HRLGVLTSGFTFSSVLNACARVPSLLEAVICGYTKIGLMDDAQRLFDSMAERNVISWSAM 154
R V + T VL+AC++V + +C + + + E ++ +A+
Sbjct: 228 ERNLVSPTSVTLLLVLSACSKVK---DKDLCKRVH-------EYVSECKTEPSLRLENAL 277
Query: 155 VAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIAGYGKCGEVREAKKVFDEISEPDASCWA 214
V YA CG M A + M ++ ++W +++ GY + G ++ A+ FD++ D W
Sbjct: 278 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 215 AMTVCYVQNGYAKAAIEMYKVMRQENVRISEVAMVGAISACTQLGDVEMAAILAKHVDEG 274
M Y++ G ++E+++ M+ + E MV ++AC LG +E+ + ++D+
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Query: 275 CCDRTNYVSNALIHMHSKCGYLDLAWREFSRIKNKDVISYSSMITAFADHGKSQEALDMF 334
V NALI M+ KCG + A + F + +D ++++M+ A++G+ QEA+ +F
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 457
Query: 335 LKMRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGR 394
+M++ I+P+ +T++GVL+AC+H G+V+ K F M I+P H CMVD+LGR
Sbjct: 458 FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 517
Query: 395 SGQLEKAHSLIMDYKDFCDAGTWGALLGACKVHVNAELGEIAARHLLELGPEKTGNSALL 454
+G +++A+ ++ ++ WGALLGA ++H + + E+AA+ +LEL P+ ALL
Sbjct: 518 AGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL 577
Query: 455 ANIYASMGKWKDSEIVKMMISETEKKKSPGCSWI 488
NIYA +WKD V+ I + KK+PG S I
Sbjct: 578 CNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 194/445 (43%), Gaps = 82/445 (18%)
Query: 11 KTFNQLKQVHSYLLKTLTKPHDQYHYYAQFLIRLLQLPGDNLSYARQVFDQIPKCKTQFL 70
KT +Q KQ+HS + P+ + + + G ++SYA ++F +IP+ +
Sbjct: 45 KTTDQFKQLHSQSITRGVAPNPTFQ--KKLFVFWCSRLGGHVSYAYKLFVKIPEPDV-VV 101
Query: 71 WTSLIRNHVLHAHFRQSILLYAKMHRLGVLTSGFTFSSVLNACARVPSLL---EAVICGY 127
W ++I+ + + LY M + GV TF +LN R L + + C
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161
Query: 128 TKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTWVAMIA 187
K GL N+ +A+V Y+ CG M A+ +DR +++ +W MI+
Sbjct: 162 VKFGL------------GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 188 GYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKVMRQENVRISEVA 247
GY + E E +IE+ M + V + V
Sbjct: 210 GYNRMKEYEE-------------------------------SIELLVEMERNLVSPTSVT 238
Query: 248 MVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWREFSRIK 307
++ +SAC+++ D ++ + ++V E + + + NAL++ ++ CG +D+A R F +K
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 308 NKDVISYSSMITAFADHGKSQ-------------------------------EALDMFLK 336
+DVIS++S++ + + G + E+L++F +
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 337 MRNEGIEPNQVTFIGVLTACSHGGLVEDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSG 396
M++ G+ P++ T + VLTAC+H G +E G + + IK ++D+ + G
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 397 QLEKAHSLIMDYKDFCDAGTWGALL 421
EKA + D D D TW A++
Sbjct: 418 CSEKAQKVFHDM-DQRDKFTWTAMV 441
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,363,291,647
Number of Sequences: 23463169
Number of extensions: 285966500
Number of successful extensions: 773020
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7755
Number of HSP's successfully gapped in prelim test: 3138
Number of HSP's that attempted gapping in prelim test: 626607
Number of HSP's gapped (non-prelim): 52015
length of query: 490
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 343
effective length of database: 8,910,109,524
effective search space: 3056167566732
effective search space used: 3056167566732
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)