Your job contains 1 sequence.
>011254
MSLNTTQMLSTTTIVSAAASAAATAMVIRSITHDYLPFEVRAYFAVKLKSLLARFSSELT
LVINEYDDGLNQNVLFKAAKLYLEPRIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFN
GVQLKWRFSSKQVPTEMVHHPDHYNPVVKSEDRCFELSFHKKYKQVVMDSYIPHVLKQSK
ETSTQKKTLKLFTLRYDRMHGMRGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVK
RKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLI
ATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDG
LWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPL
FLEVEGLIEKAKVTPADVAEQLMRNEVPEIALRELIQFLEIKRRESDESKAKEVKEERAE
EAESVRAIEA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011254
(490 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 1221 3.4e-128 2
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 1098 3.3e-111 1
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 1032 3.2e-104 1
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 980 1.0e-98 1
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 968 2.0e-97 1
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 960 1.4e-96 1
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 953 7.6e-96 1
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 833 3.9e-83 1
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 827 1.7e-82 1
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 823 4.5e-82 1
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 810 1.1e-80 1
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 809 1.4e-80 1
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 798 2.0e-79 1
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 793 6.8e-79 1
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 787 3.0e-78 1
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 725 2.0e-77 2
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 779 2.1e-77 1
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 773 9.0e-77 1
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 764 8.1e-76 1
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 752 1.5e-74 1
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 748 4.0e-74 1
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 659 1.1e-64 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 363 7.8e-62 2
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 342 4.2e-51 2
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 318 3.5e-28 1
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 298 4.9e-25 1
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 296 5.0e-25 1
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 198 1.4e-24 2
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 290 4.2e-24 1
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 289 5.9e-24 1
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 290 1.7e-23 1
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 285 2.3e-23 1
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 284 3.0e-23 1
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 283 4.1e-23 1
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 289 8.0e-23 2
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 182 1.3e-22 2
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 200 1.3e-22 2
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 280 1.6e-22 1
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 282 2.0e-22 1
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 277 2.5e-22 1
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 274 6.0e-22 1
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 273 8.2e-22 1
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 273 8.2e-22 1
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 256 1.4e-21 1
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 186 1.5e-21 2
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 195 1.5e-21 2
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 268 6.7e-21 1
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 268 6.7e-21 1
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 264 5.7e-20 1
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 170 2.1e-17 2
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 218 6.6e-15 1
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 187 6.1e-14 1
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 185 6.1e-13 1
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 173 2.1e-12 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 191 1.3e-11 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 182 1.1e-10 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 177 1.2e-10 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 171 1.8e-09 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 166 1.9e-09 1
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 165 2.1e-09 2
GENEDB_PFALCIPARUM|PFD0665c - symbol:PFD0665c "26s protea... 164 3.3e-09 1
UNIPROTKB|Q8I1V1 - symbol:PFD0665c "26S proteasome AAA-AT... 164 3.3e-09 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 164 3.5e-09 1
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 164 4.2e-09 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 163 5.7e-09 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 163 5.7e-09 1
POMBASE|SPCC576.10c - symbol:rpt3 "19S proteasome regulat... 161 7.1e-09 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 161 7.2e-09 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 161 7.2e-09 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 161 8.3e-09 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 161 8.3e-09 1
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 161 8.4e-09 1
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 160 1.0e-08 1
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 160 1.0e-08 1
UNIPROTKB|Q5A0L8 - symbol:PR26 "Likely 26S proteasome reg... 160 1.0e-08 1
UNIPROTKB|G4MMM3 - symbol:MGG_16395 "ATP-dependent Zn pro... 133 1.3e-08 2
UNIPROTKB|C9J1S9 - symbol:BCS1L "Mitochondrial chaperone ... 138 1.3e-08 1
SGD|S000002802 - symbol:RPT3 "ATPase of the 19S regulator... 159 1.5e-08 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 156 2.3e-08 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 157 2.6e-08 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 161 2.8e-08 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 156 3.3e-08 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 156 3.3e-08 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 156 3.3e-08 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 156 3.3e-08 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 156 3.3e-08 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 156 3.3e-08 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 156 3.3e-08 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 156 3.3e-08 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 156 3.3e-08 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 157 3.5e-08 2
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 152 4.1e-08 2
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 152 4.1e-08 2
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 158 4.8e-08 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 154 5.3e-08 1
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 158 6.0e-08 1
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 153 6.0e-08 1
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702... 158 6.4e-08 1
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 157 6.4e-08 1
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 156 6.9e-08 1
WARNING: Descriptions of 278 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 1221 (434.9 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
Identities = 237/442 (53%), Positives = 314/442 (71%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEP 85
M+ RS+ DYLP EV Y + +S+ FSS++T++I E++ G N +F+AA+ YL
Sbjct: 73 MLARSLVQDYLPDEVHHYISYGFRSIFGYFSSQMTIIIEEFE-GFAHNEVFEAAEAYLAT 131
Query: 86 RIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYN 145
+I P KRIK++ KE + +VE+DEE+VD +NGV+ +W + V ++ H+P N
Sbjct: 132 KISPSNKRIKVSKHEKENNYNVTVERDEEVVDTYNGVKFQWILHCRHVESKHFHNPRDLN 191
Query: 146 PVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRGD 205
++SE R FEL+FHKK+K V ++SY+P + FTL + M+G D
Sbjct: 192 STLRSEVRSFELNFHKKFKDVALESYLPFMVKRATLMKQEKKTLKIFTLSPENMYGNYSD 251
Query: 206 VWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTG 265
W SV LDHP+TF TLAMDSD+K +M+DL++FVKR++FY+ VGKAWKRGYLLYGPPGTG
Sbjct: 252 AWTSVTLDHPSTFKTLAMDSDVKTSVMEDLDKFVKRRDFYKRVGKAWKRGYLLYGPPGTG 311
Query: 266 KSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAK 325
KSSLIAAMAN+LNFD+YDLELT + N ELR LLIAT N+SIL+VEDIDCS+EL+DR +
Sbjct: 312 KSSLIAAMANHLNFDIYDLELTAVNNNSELRRLLIATANRSILIVEDIDCSLELKDRTSD 371
Query: 326 AKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAF 385
+ D+ P + +VTLSG+LNFIDGLWSSCGDERIIIFTTN+K++LD A
Sbjct: 372 EPPRESDDIE--DP-----RYKKVTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDAAL 424
Query: 386 LRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRN 445
LRPGRMD+HIHMSYCT FK LA +YL I EH LF ++E IE +VTPA+VAEQLMRN
Sbjct: 425 LRPGRMDMHIHMSYCTPSTFKALALNYLEIKEHRLFSKIEEGIEATEVTPAEVAEQLMRN 484
Query: 446 EVPEIALRELIQFLEIKRRESD 467
+ + L LI+FL++K+ E++
Sbjct: 485 DSVDKVLEGLIEFLKVKKIENE 506
Score = 58 (25.5 bits), Expect = 3.4e-128, Sum P(2) = 3.4e-128
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 433 VTPADVAEQLMRNEVPEIALRELIQFLEIKRRESD 467
V +V EQL+RN+ + L L++ L+ K+ E D
Sbjct: 530 VVKKEVDEQLVRNDRVDKVLEGLVELLKAKKIEDD 564
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
Identities = 221/439 (50%), Positives = 306/439 (69%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEP 85
++ RS+ DY+P EV Y + + + FS ++T VI E+ G N +F+AA+ YL
Sbjct: 27 ILARSVVQDYMPNEVHEYISHGFRRFFSYFSYQMTAVIEEFG-GFEHNQVFEAAEAYLST 85
Query: 86 RIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYN 145
+I +RIK+N K++ S +VE+DEE+VD+F+GV+L W + V + +P N
Sbjct: 86 KISNSTRRIKVNKLEKQSNYSVTVERDEEVVDIFDGVKLSWILVCRHVDKKDFRNPRDLN 145
Query: 146 PVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRGD 205
+KSE R +ELSF KK+K +V++SY+P V FT+ D + +
Sbjct: 146 STLKSEVRSYELSFRKKFKNMVLESYLPFVVEQAASIKQKFKTLKIFTV--DS-YSVE-- 200
Query: 206 VWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTG 265
W SV LDHP+TF TLA+D ++K+ +++DL+RFV+RK FY VGKAWKRGYLLYGPPGTG
Sbjct: 201 -WTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTG 259
Query: 266 KSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAK 325
KSSLIAA+AN+LNFD+YDL+LT+L N ELR LL++T N+SILVVEDIDCSIEL+DR
Sbjct: 260 KSSLIAAIANHLNFDIYDLDLTSLNNNAELRRLLMSTANRSILVVEDIDCSIELKDR--- 316
Query: 326 AKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAF 385
+ D P L++ VTLSG+LNF+DGLWSSCG+ERII+FTTN++++LDPA
Sbjct: 317 -----STDQENNDP---LHKT--VTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPAL 366
Query: 386 LRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRN 445
LRPGRMD+HIHMSYCT FK+LAS+YL I +H LF ++E I + +VTPA+VAEQLMR+
Sbjct: 367 LRPGRMDMHIHMSYCTPAAFKVLASNYLEIQDHILFEQIEEFIREIEVTPAEVAEQLMRS 426
Query: 446 EVPEIALRELIQFLEIKRR 464
+ + L+ L++FL+ K++
Sbjct: 427 DSVDKVLQGLVEFLKAKKQ 445
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 216/444 (48%), Positives = 300/444 (67%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEP 85
M+ RS+ HD++P ++R+YF+ L S LT++I+E + GLN+N +F AA++YL
Sbjct: 26 MLFRSMLHDFVPEKLRSYFSSLLDRFFTPKSKYLTVIIDE-NFGLNRNQVFDAAEMYLRS 84
Query: 86 RIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYN 145
+I P +R+++ K+ + S+E+ EEI+D F ++KW + V +
Sbjct: 85 KIGPETERLRVGKIPKQKHFTISIERGEEILDTFEESEVKWSY---------VQSENEKG 135
Query: 146 PVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLR-Y--DRMHGM 202
VK R +EL+F KK + V++SY+ HV ++ Y D GM
Sbjct: 136 DKVK---RYYELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVVKLYSRDVYASDDDDGM 192
Query: 203 RGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPP 262
G W +NL+HP+TFDTLAMD + K+ I+DDLERF+KRKEFY+ VGKAWKRGYLLYGPP
Sbjct: 193 AGGNWGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPP 252
Query: 263 GTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDR 322
GTGKSSLIAAMANYL FDV+DLEL+++ N EL+ +L++T N+SILV+EDIDC+ E++DR
Sbjct: 253 GTGKSSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVIEDIDCNAEVRDR 312
Query: 323 FAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLD 382
+A N D + +VTLSG+LNFIDGLWSS GDERII+FTTNHK+RLD
Sbjct: 313 ----EAENQEDEQI---------KGKVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLD 359
Query: 383 PAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGIT--EHPLFLEVEGLIEKAKVTPADVAE 440
PA LRPGRMDVHI+MSYCT GF+ L S+YLG+ HPL E+E L++ +VTPA++AE
Sbjct: 360 PALLRPGRMDVHINMSYCTGLGFRTLVSNYLGLDGLNHPLCEEIEALVDSTEVTPAELAE 419
Query: 441 QLMRNEVPEIALRELIQFLEIKRR 464
+LM+++ ++ LR +I F+E KR+
Sbjct: 420 ELMQDDDTDVVLRGVISFVE-KRK 442
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 206/446 (46%), Positives = 290/446 (65%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEP 85
M+ RS+ +D +P +R+Y L S LT+VI+E G +N +F AA++YL
Sbjct: 27 MLFRSLFNDEVPERLRSYITDLLNRFFTPKSKNLTMVIDEII-GFKRNQVFDAAEVYLRN 85
Query: 86 RIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYN 145
+I P R+++ K+ + +EK EEI+D F +L+W + V +E N
Sbjct: 86 KIGPETARLRVGKLPKQKHFTIYIEKGEEILDTFENSELRWTY----VESE--------N 133
Query: 146 PVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFT--LRYDRMH-GM 202
+ E R +EL+F KK + VM+SY+ HV ++ +R + GM
Sbjct: 134 EASQKEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRAVKLYSRDVRASKDDDGM 193
Query: 203 RGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPP 262
G W +NL+HP+TF+TLAMD K+ I+DD+ERF+KR+EFY+ VGKAWKRGYLLYGPP
Sbjct: 194 AGAGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYLLYGPP 253
Query: 263 GTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCS-IELQD 321
GTGKSSLIAAMANYL FDV+DLEL+++ N +L+++L++T N+SILV+EDIDCS E+ D
Sbjct: 254 GTGKSSLIAAMANYLKFDVFDLELSSIYENAQLKSILLSTTNRSILVIEDIDCSSAEVVD 313
Query: 322 RFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRL 381
R +A + +VTLSG+LNF+DGLWSS GDERII+FTTNHK+RL
Sbjct: 314 R----EADEYQEYEE-------GYYGRVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERL 362
Query: 382 DPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGI--TEHPLFLEVEGLIEKAKVTPADVA 439
DPA LRPGRMD+HI+MSYCT GF+ L S+YLG+ HPL E+E LI+ +VTPA++A
Sbjct: 363 DPALLRPGRMDMHINMSYCTGLGFRTLVSNYLGLGGLNHPLCEEIEALIDSTEVTPAELA 422
Query: 440 EQLMRNEVPEIALRELIQFLEIKRRE 465
E+LM+ + ++ LR ++ F+E ++ E
Sbjct: 423 EELMQEDDTDVVLRGVVSFVENRKVE 448
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 215/465 (46%), Positives = 305/465 (65%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLARFSSE-LTLVINEYDDGLNQNVLFKAAKLYLE 84
M+IRS+ H+ +P ++ + L+SL R SS LTL I++ + G+N N +++AA+ YL
Sbjct: 25 MMIRSMAHELIPAPLQDFIYRTLRSLFFRSSSSTLTLTIDDDNMGMN-NEIYRAAQTYLS 83
Query: 85 PRIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRF----SSKQVPTEMVH- 139
+I P R++I+ +K+ ++ + E + DV+ VQL WRF K+ V
Sbjct: 84 TKISPDAVRLRISKGHKDKHVNLYLSDGEIVNDVYEDVQLVWRFVTDGGDKKGGGGGVGG 143
Query: 140 ------HPDHYNPVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFT 193
+ KSE FELSF KK+K ++++SY+P++
Sbjct: 144 RGGGGGRRGGMDDDGKSE--YFELSFDKKHKDLILNSYVPYIESKAKEIRDER------- 194
Query: 194 LRYDRMHGMRGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWK 253
R +H + W+SV L+HP+TF+T+AM+ D+K+ +++DL+RF++RKEFY+ VGKAWK
Sbjct: 195 -RILMLHSLNSLRWESVILEHPSTFETMAMEDDLKRDVIEDLDRFIRRKEFYKRVGKAWK 253
Query: 254 RGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDI 313
RGYLLYGPPGTGKSSL+AAMANYL FDVYDL+L ++ + +LR LL+AT N+SILV+EDI
Sbjct: 254 RGYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVMRDSDLRRLLLATRNRSILVIEDI 313
Query: 314 DCSIELQDRFAKAKATNAMDLNVIQPVMNLN----QVPQVTLSGMLNFIDGLWSSCGDER 369
DC+++L +R + QPV N Q P +TLSG+LNFIDGLWSSCGDER
Sbjct: 314 DCAVDLPNR-------------IEQPVEGKNRGESQGP-LTLSGLLNFIDGLWSSCGDER 359
Query: 370 IIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITE----HPLFLEVE 425
IIIFTTNHKDRLDPA LRPGRMD+HI+M +C+ GFK LAS+YLG+++ H LF E+E
Sbjct: 360 IIIFTTNHKDRLDPALLRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDAAMPHRLFPEIE 419
Query: 426 GLIEKAKVTPADVAEQLMRNEVPEIALRELIQFLE---IKRRESD 467
LI+ +TPA VAE+LM++E ++AL L+ LE +K +ES+
Sbjct: 420 RLIDGEVMTPAQVAEELMKSEDADVALEGLVNVLEKMRLKSKESN 464
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 202/446 (45%), Positives = 287/446 (64%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEP 85
M+I+ + + +P V+ + LKS SS LTL I++ + L+ AA+ YL
Sbjct: 25 MIIKPMINTIIPRPVQNFVFSYLKSFAGSRSSTLTLTIDQMSSMYIPDELYAAAQAYLST 84
Query: 86 RIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVH-HPDHY 144
+I P R+ + E K+ + E + DV+NG++LKWRF ++ MV + Y
Sbjct: 85 KISPNSVRLIMARDPAEKKVKLYLSDGEVVSDVYNGIKLKWRFLARNKNNTMVEEYGQSY 144
Query: 145 NPVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRG 204
++ E ELSF KK++ +V++SYIP+V Y M
Sbjct: 145 QGNIQRES--LELSFDKKHRDLVVNSYIPYVESKAKEVNNKRRILKMHC--YSHM----A 196
Query: 205 DVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGT 264
WQSVN HP+TFDT+AM+ D+K+ +++DL+RFV RK+FY+ VGKAWKRGYLLYGPPGT
Sbjct: 197 QTWQSVNFKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGPPGT 256
Query: 265 GKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFA 324
GKSSL+AAMANYL FD+YDL+L +++G+ LR+LL+AT N SIL++EDIDCS++L R
Sbjct: 257 GKSSLVAAMANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILLIEDIDCSVDLPTRLQ 316
Query: 325 KAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPA 384
T+ QP+ + +TLSG+LN IDGLWSSCG+ERIIIFTTN+K++LDPA
Sbjct: 317 PPTETS-------QPLGAVQVSKPLTLSGLLNCIDGLWSSCGNERIIIFTTNNKEKLDPA 369
Query: 385 FLRPGRMDVHIHMSYCTSCGFKMLASSYLGITE-----HPLFLEVEGLIEKAKVTPADVA 439
LRPGRMD+HI+M +C+ GFK LAS+YLG+++ HPL +++ LI+ +TPA VA
Sbjct: 370 LLRPGRMDMHIYMGHCSFQGFKTLASNYLGLSDENDDTHPLCPDIKHLIDGHVLTPAQVA 429
Query: 440 EQLMRNEVPEIALRELIQFLEIKRRE 465
E+LM++E + AL L++ L+ KR E
Sbjct: 430 EELMKDEDADAALEGLVKVLKRKRLE 455
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
Identities = 193/444 (43%), Positives = 287/444 (64%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEP 85
M+I+ +P ++ Y L S L S LTL+I+++ N L+ AA++Y+
Sbjct: 25 MMIKPFLEMTIPPPLQNYMISYLNSFLHSTPSTLTLIIDDHIKNGMYNELYGAAQVYIST 84
Query: 86 RIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHH-PDHY 144
++ +R++I+ E ++ E + D++ G+++KWRF + MVH+ +H+
Sbjct: 85 KVNHNAERLRISRDRSEKNVNIHFSVGEVVSDIYQGIEVKWRFCVDSNKSNMVHYFGEHF 144
Query: 145 NPVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRG 204
+ + C ELSF KK+ ++V++SYIP+V ++ Y M+ ++
Sbjct: 145 K--LNPDRECVELSFEKKHTELVLNSYIPYVESKAKVINNERKILKMYS--YCCMY-LK- 198
Query: 205 DVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGT 264
WQSVNL+HP+TFDT+AM+ ++K+ +M DL+RF++RK+FY+ VGK WKRGYLLYGPPGT
Sbjct: 199 --WQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGYLLYGPPGT 256
Query: 265 GKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFA 324
GK+SL+AA+ANYL FD+YDL+L ++R + +LR LL+ T N SIL+VEDIDC+++L R
Sbjct: 257 GKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDCAVDLHTRLQ 316
Query: 325 KAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPA 384
+ +++ TLSG+L IDGLWSSCGDERI+IFTT HK+RLDPA
Sbjct: 317 PKTQDDTKGSSML------------TLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPA 364
Query: 385 FLRPGRMDVHIHMSYCTSCGFKMLASSYLGITE---HPLFLEVEGLIEKAKVTPADVAEQ 441
LRPGRMD+HIHM +C FK LAS+YLG++ H L+ E+E LI+ +TPA VAE+
Sbjct: 365 LLRPGRMDMHIHMGHCCFDVFKTLASNYLGLSHDDPHHLYPEIERLIKGEVLTPAQVAEE 424
Query: 442 LMRNEVPEIALRELIQFLEIKRRE 465
LM+NE P++AL L++ L+ KR E
Sbjct: 425 LMKNEDPDVALEGLVKVLKRKRLE 448
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 184/449 (40%), Positives = 259/449 (57%)
Query: 29 RSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEPRIP 88
+S+ + P E+R + FS+ I E D G+N N L+ A +LYL +
Sbjct: 19 QSLMNSVFPPELRFAISKLFNKFFKLFSTFCYFDITEID-GVNTNELYNAVQLYLSSSVS 77
Query: 89 PYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYNPVV 148
R+ + + ++ + ++ IVD FN V + W Q T+ + P+
Sbjct: 78 IAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSVTVVWEHIVTQRQTQTFA----WRPMP 133
Query: 149 KSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRGDVWQ 208
+ E R F L KK K +++DSY+ ++ +T RG W+
Sbjct: 134 E-EKRGFTLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYTNSRGGSLDSRGLPWE 192
Query: 209 SVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSS 268
SV HP+TFDTLAMD KQ IM+DL+ F + + FY G+AWKRGYLLYGPPGTGKSS
Sbjct: 193 SVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLLYGPPGTGKSS 252
Query: 269 LIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKA 328
+IAAMANYL +D+YDLELT ++ N ELR LL+ T +KSI+V+EDIDCSI L +R K
Sbjct: 253 MIAAMANYLRYDIYDLELTEVKSNSELRKLLMKTSSKSIIVIEDIDCSINLTNRNKKQST 312
Query: 329 TNAMDLNVIQPVM---NLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAF 385
+ + ++ +L +TLSG+LNF DGLWS CG ERI +FTTNH ++LDPA
Sbjct: 313 GSYNEPEMLTGSGLGDDLGDGNTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPAL 372
Query: 386 LRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPL----FLEVEGLIEKAKVTPADVAEQ 441
LR GRMD+HIHMSYCT K+L +YLG E L E+ ++++A++TPADV+E
Sbjct: 373 LRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEVVDRAEITPADVSEA 432
Query: 442 LMRNEVP-EIALRELIQFLE--IKRRESD 467
L++N E A+REL+ L ++R E +
Sbjct: 433 LIKNRRDKERAVRELLVDLRSRVERNEKN 461
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 179/452 (39%), Positives = 270/452 (59%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEY-DDGLNQNVLFKAAKLYLE 84
M +I Y+P RAY ++ S + + EY D+GL ++ + + + YL
Sbjct: 19 MFFWAIYKQYVPAHFRAYVERYFHKMIGWISYYVDIKFTEYTDEGLKRSQAYDSIRNYLA 78
Query: 85 PRIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHY 144
+ KR+K N + S++ EEI D F GV++KW +S+ +V + +Y
Sbjct: 79 SKSTALAKRLKANETKNSKSLVFSMDDHEEIEDEFEGVKVKW-YSNVKV----IQPQSNY 133
Query: 145 NPVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDR-MHGMR 203
E R F LSFH++++ +++++Y+ HV +T + + R
Sbjct: 134 GQRSSEERRHFTLSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTNNSSQEWYPWR 193
Query: 204 GDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPG 263
W +V HPATF+TLAMD + K+ I DL +F K K++Y+ VGK WKRGYLL+GPPG
Sbjct: 194 SGKWSNVPFHHPATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLLFGPPG 253
Query: 264 TGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRF 323
TGKS++IAA+AN+L++DVYDLELT ++ N EL+ LL+ T +KSI+V+EDIDCS++L +
Sbjct: 254 TGKSTMIAAIANFLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVIEDIDCSLDLTGQR 313
Query: 324 AKAKATNAMD------LNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNH 377
K K + + +P ++ Q +VTLSG+LN IDGLWS+C E+II+FTTN
Sbjct: 314 KKKKEEDEEEDGEEKKEGEKKPKVDDKQ-SKVTLSGLLNSIDGLWSACSGEKIIVFTTNF 372
Query: 378 KDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPAD 437
D+LDPA +R GRMD HI MSYC FK+LA +YL I H L+ E+E +E+ ++PAD
Sbjct: 373 VDKLDPALIRRGRMDNHIEMSYCKFEAFKVLAKNYLEIETHDLYGEIERKLEETDMSPAD 432
Query: 438 VAEQLMRN---EVPEIALRELIQFLEIKRRES 466
VAE LM E +I ++ L++ LE ++ ++
Sbjct: 433 VAETLMPKSDEEDADICIKRLVKTLEEEKEKA 464
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 178/432 (41%), Positives = 257/432 (59%)
Query: 48 LKSLLARFSSELTLVINEYD-DGLNQNVLFKAAKLYLEPRIPPYVKRIKINLPNKETKIS 106
L L RF + + +EY + ++ + + YL K++K N I
Sbjct: 40 LYRLFGRFYPYIQITFHEYSGEHFKRSEAYLGIQSYLSKDSSARAKKLKANTTKGSKSIV 99
Query: 107 CSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYNPVVKSEDRCFELSFHKKYKQV 166
S++ EEI D F G+++ W+ S K+ T + P +E R + L FH++ ++V
Sbjct: 100 LSMDDKEEITDDFEGIRVWWQ-SKKEGATRQSFS---FYPEA-NEKRYYMLRFHRRDREV 154
Query: 167 VMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRGDVWQSVNLDHPATFDTLAMDSD 226
+++ Y+ HV ++ + HG W V +HPATFDTLAM+ +
Sbjct: 155 IIERYLEHVMREGKTIEQKNRERKLYSNTPGQSHG-NNSKWSHVTFEHPATFDTLAMEEN 213
Query: 227 MKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLEL 286
K+ I DL +F K K++Y+ +GKAWKRGYLL+GPPGTGKS++IAAMAN+L +DVYDLEL
Sbjct: 214 KKEEIKSDLIKFSKSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANFLEYDVYDLEL 273
Query: 287 TNLRGNMELRNLLIATENKSILVVEDIDCSIEL--QDRFAKAKATNAMDLNVIQPVMNL- 343
T ++ N LR LLI T KSI+V+EDIDCS+ L Q + + + + D N I+ M +
Sbjct: 274 TTVKDNTHLRRLLIETSAKSIIVIEDIDCSLNLTGQRKKKEEEEEDGDDKNTIEKKMMMK 333
Query: 344 ----NQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSY 399
N+ +VTLSG+LNFIDGLWS+CG ERII+FTTN D+LDPA +R GRMD HI MSY
Sbjct: 334 NEGENKESKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMSY 393
Query: 400 CTSCGFKMLASSYLGITEHPLFLEVEGL--IEKAKVTPADVAEQLM---RNEVPEIALRE 454
C FK+LA +YL + E +F E++ L +E+ K+TPADV E L+ E E L+
Sbjct: 394 CCFEAFKVLAKNYLDVEESEMFEEIKRLLEVEEIKMTPADVGENLLPKSEKEGGETCLKR 453
Query: 455 LIQFLEIKRRES 466
LI+ L+ ++ E+
Sbjct: 454 LIEALKEEKEEA 465
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 180/456 (39%), Positives = 263/456 (57%)
Query: 28 IRSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYD-DGLNQNVLFKAAKLYLEPR 86
I +I + P+ +R +F +SL+ + + +EY + ++ ++ A + YL
Sbjct: 21 IYTIFERFFPYRLREHFEPLAQSLIGFIYPYIQITFHEYSGERFKRSDVYDAIQSYLSKD 80
Query: 87 IPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYNP 146
K++ N I S++ EEI D F GV++ W+ Q + + + P
Sbjct: 81 SSSRAKKLTANTIKGNKSIILSMDDHEEITDEFQGVKVWWQSKKHQSESRAIS----FYP 136
Query: 147 VVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDR-MHGMRGD 205
E R + L FH++ ++V+ Y+ HV ++ + G +
Sbjct: 137 KA-DESRFYMLKFHRRDREVITKKYLNHVISEGKTIEVKNRERKLYSNNPSQNWSGYKQT 195
Query: 206 VWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTG 265
W V +HPATFDTLAM+ K+ I +DL +F K++Y+ +GKAWKRGYLL+GPPGTG
Sbjct: 196 KWSHVTFEHPATFDTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKAWKRGYLLFGPPGTG 255
Query: 266 KSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAK 325
KS++IAAMAN L +DVYDLELT ++ N ELR LLI T KSI+V+EDIDCS++L + K
Sbjct: 256 KSTMIAAMANLLEYDVYDLELTTVKDNTELRRLLIETSGKSIIVIEDIDCSLDLTGQ-RK 314
Query: 326 AKATNAMDLNVIQPV-------MNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHK 378
K D + P+ N+ +VTLSG+LNFIDGLWS+CG ERII+FTTN
Sbjct: 315 QKKDEEEDEDETSPIEKQMKKDQGENKGSKVTLSGLLNFIDGLWSACGGERIIVFTTNFI 374
Query: 379 DRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITE---HPLFLEVEGL--IEKAKV 433
D+LDPA +R GRMD HI MSYC FK+LA++YL E + LF E++ L +E+ K+
Sbjct: 375 DKLDPALIRKGRMDKHIEMSYCGFEAFKVLANNYLDAKEEDDNELFDEIKRLLEVEEIKM 434
Query: 434 TPADVAEQLMRN---EVPEIALRELIQFLEIKRRES 466
TPADV E L++ E EI L+ LI+ L+ ++ E+
Sbjct: 435 TPADVGENLLKKSEVETKEICLKRLIEALKEEKEEA 470
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 185/457 (40%), Positives = 263/457 (57%)
Query: 29 RSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEPRIP 88
++I P E+R F L + FSS + I E D G+N N L+ A +LYL +
Sbjct: 19 QTIVQLVFPPELRLAFLHFLTRIRHVFSSHIYFDITEID-GVNTNELYNAVQLYLSSSVT 77
Query: 89 --PYVK------RIKIN-LPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVH 139
V R+ + +PN + ++ + ++ I DVFNGV + W + V +
Sbjct: 78 VNDAVSSSNNNTRLSLTRVPNSSS-VTFGLSNNDRITDVFNGVTILW----EHVVVQRQV 132
Query: 140 HPDHYNPVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRM 199
+ P+ + E R F L +K+ K +V+DSY+ ++ +T
Sbjct: 133 QSFSWRPMPE-EKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEERLLYTNSRGVS 191
Query: 200 HGMRGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLY 259
R W SV HP+TFDTLAMD + K+ IM+DL F + FY+ G+AWKRGYLLY
Sbjct: 192 LDARSHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFYQKTGRAWKRGYLLY 251
Query: 260 GPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIEL 319
GPPGTGKSSLIAAMANYL +D+YDLELT ++ N ELR LL+ T +KSI+V+EDIDCSI L
Sbjct: 252 GPPGTGKSSLIAAMANYLGYDIYDLELTEVQNNSELRKLLMKTSSKSIIVIEDIDCSISL 311
Query: 320 QDRFAKAKATNAMDLNV-IQPVMNLNQV-PQVTLSGMLNFIDGLWSSCGDERIIIFTTNH 377
R K + + + + L + VTLSG+LNF DGLWS CG E+I +FTTNH
Sbjct: 312 TKRGKNKKKNGSYEYDPGLTNGSGLEEPGSSVTLSGLLNFTDGLWSCCGSEKIFVFTTNH 371
Query: 378 KDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPL----FLEVEGLIEKAKV 433
++LD A +R GRMD+H+HM +C K+L +YL + E + E+E +E+A++
Sbjct: 372 IEKLDSALMRSGRMDMHVHMGFCKFPALKILLKNYLRLEEEDMDSVVLKEMEECVEEAEI 431
Query: 434 TPADVAEQLMRNEVP-EIALRELIQFLE---IKRRES 466
TPADV+E L+RN E A+RE++ L+ +KRR+S
Sbjct: 432 TPADVSEVLIRNRSDAEKAVREIVSVLKERVVKRRKS 468
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 173/455 (38%), Positives = 263/455 (57%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEY--DDGLNQNVLFKAAKLYL 83
M S+ ++P+++R Y + S+ + + EY D GL ++ + + YL
Sbjct: 19 MFFWSVYRQFVPYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTEDKGLKKSQAYDLIRNYL 78
Query: 84 EPRIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDH 143
+ +R+K N + S++ E + DVF GV++ W S + D
Sbjct: 79 SSKSTARAQRLKANESKNSKSLVLSLDNHEAVEDVFQGVKVVWSLS-------VWKSNDQ 131
Query: 144 YNPVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGM- 202
+ SE R LSFH +Y++++ +Y+ HV +T + +
Sbjct: 132 AD---SSEKRYLTLSFHNRYREMITTTYLDHVLREGKEIGLKNRERKLYTNNSSQDYSAW 188
Query: 203 RGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPP 262
R W +V DHPATF+TLAMD + K+ + DL +F K K++YR VGK WKRGYLL+GPP
Sbjct: 189 REGRWSNVPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKPWKRGYLLFGPP 248
Query: 263 GTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDR 322
GTGKS++I+AMAN+L +DVYDLELT ++ N EL+ L++ T+ KSI+V+EDIDCS++L +
Sbjct: 249 GTGKSTMISAMANFLEYDVYDLELTTVKDNSELKKLMLDTKGKSIVVIEDIDCSLDLTGQ 308
Query: 323 FAKAKATNAMD-----LNVIQPVMNLNQ---VPQVTLSGMLNFIDGLWSSCGDERIIIFT 374
K K + + + ++ + +VTLSG+LN IDGLWS+C E+II+FT
Sbjct: 309 RKKKKEEDEDEEEEEKKKEAEKLLKRERGERESKVTLSGLLNAIDGLWSACSGEKIIVFT 368
Query: 375 TNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVT 434
TN+ D+LDPA +R GRMD HI MSYC FK+LA +YL I H LF E++ L+E+ ++
Sbjct: 369 TNYLDKLDPALIRRGRMDNHIEMSYCRFEAFKVLAKNYLEIESHDLFGEIKRLVEETDMS 428
Query: 435 PADVAEQLMRN---EVPEIALRELIQFLEIKRRES 466
PADVAE LM + +I L L++ LE ++ ++
Sbjct: 429 PADVAENLMPKSDEDDADICLTRLVKSLEEEKEKA 463
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 178/435 (40%), Positives = 245/435 (56%)
Query: 29 RSITHDYLPFEVRAYFAVKLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEPRIP 88
+S+ P E+R F + FSS I E D G+N N L+ A +LYL +
Sbjct: 19 QSLMQSIFPPELRFAFLKFFNRIFHVFSSYCYFDITEID-GVNTNELYNAVQLYLSSSVS 77
Query: 89 PYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYNPVV 148
R+ + + I+ + ++ IVD FNGV + W + V T+ + P+
Sbjct: 78 IAGNRLSLTRAVNSSSITFGLSNNDSIVDTFNGVTVLW----EHVVTQRQTQTFAWRPLP 133
Query: 149 KSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRGDVWQ 208
+ E R F L KK K ++++SY+ ++ +T RG W+
Sbjct: 134 E-EKRGFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLLYTNSRGGSLDSRGHPWE 192
Query: 209 SVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSS 268
SV HP+TF+TLAMD KQ IMDDL+ F + + FY+ G+AWKRGYLLYGPPGTGKSS
Sbjct: 193 SVPFKHPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRGYLLYGPPGTGKSS 252
Query: 269 LIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKA 328
+IAAMANYL +D+YDLELT + N ELR LL+ T +KSI+V+EDIDCSI L +R K +
Sbjct: 253 MIAAMANYLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIVIEDIDCSINLTNR--KKNS 310
Query: 329 TNAMDLNVIQPVMNLNQVPQ--------------VTLSGMLNFIDGLWSSCGDERIIIFT 374
+N N +TLSG+LNF DGLWS CG ERI +FT
Sbjct: 311 SNVSSQRSYYDAETRNGSGSGSGGSGEEGGNGNTITLSGLLNFTDGLWSCCGSERIFVFT 370
Query: 375 TNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPL----FLEVEGLIEK 430
TNH ++LDPA LR GRMD+HI+MS+C K+L +YLG + E+E ++EK
Sbjct: 371 TNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKILLKNYLGYGVEDINGDVLKEMEMVVEK 430
Query: 431 AKVTPADVAEQLMRN 445
A++TPADV+E L++N
Sbjct: 431 AEMTPADVSEALIKN 445
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 157/317 (49%), Positives = 214/317 (67%)
Query: 153 RCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGM-RGDVWQSVN 211
R F+L+FH++ + +V DSYI +V FT G + W+ ++
Sbjct: 137 RTFKLTFHRRSRDIVTDSYIKYVFEEGKSIQAKSKQMKLFTNNPSSHWGTSKKSFWRYID 196
Query: 212 LDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIA 271
+HPA+F TLAMD+ K+ I++DL F KE+Y+ +GKAWKRGYLL+GPPGTGKS++IA
Sbjct: 197 FEHPASFHTLAMDTKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTMIA 256
Query: 272 AMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNA 331
AMAN+LN+ +YDLELT +R N ELR LL AT +KSI+V+EDIDCS++L + K K N
Sbjct: 257 AMANHLNYSIYDLELTAIRNNSELRKLLTATSSKSIIVIEDIDCSLDLTGKRKKEK--NL 314
Query: 332 MDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRM 391
M VTLSG+LNFIDG+WS+CG ERIIIFTTNH ++LDPA +R GRM
Sbjct: 315 MTSREDGEQGTEEDKSFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRM 374
Query: 392 DVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRNEVPEI- 450
D+HI +SYC+ FK+LA +YL + HPLF ++E L+++ K+ PADVAE LM+ EI
Sbjct: 375 DMHIELSYCSFEAFKILAKNYLDLDTHPLFKKIESLLKETKIAPADVAENLMKKNT-EID 433
Query: 451 ---ALRELIQFLEIKRR 464
+L++LIQ LE K++
Sbjct: 434 ADGSLKDLIQALEGKKK 450
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 725 (260.3 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 156/316 (49%), Positives = 203/316 (64%)
Query: 148 VKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLR--YDRMHGMRGD 205
VK + C L+FH+ VV SY+ +V + M+G
Sbjct: 131 VKGKKIC-RLTFHRSNWDVVTGSYLRYVVEEGKSIKARKKKVMVLMNNPSLNWKTSMKG- 188
Query: 206 VWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTG 265
+W +HPATFDTLAMD D K I DL F KE+Y +GKAWKRGYLLYGPPGTG
Sbjct: 189 LWTCTEFEHPATFDTLAMDIDKKDEIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTG 248
Query: 266 KSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQ-DRFA 324
KS++IAAMAN + +++YDLELT++ N EL+ LLIAT NKSI+V+EDIDCS++L +R
Sbjct: 249 KSTMIAAMANLMKYNIYDLELTSIGNNWELKKLLIATTNKSIIVIEDIDCSLDLTGEREV 308
Query: 325 KAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPA 384
K DL + N V TLSG+LNFIDG+WS+CG ERI++FTTNH +LD A
Sbjct: 309 K-------DLKGDKEGKKSNAV---TLSGLLNFIDGIWSACGQERILVFTTNHVGKLDQA 358
Query: 385 FLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMR 444
+R GRMD+HI +SYCT FK+LA +YL I H LF E+E L+++ K+TPADVAE +M
Sbjct: 359 LIRRGRMDMHIELSYCTFGAFKILAKNYLNIDSHHLFGEIESLLKETKITPADVAEHMMA 418
Query: 445 NEVPEIALRELIQFLE 460
EV + +L+ LI+ LE
Sbjct: 419 KEV-DGSLKGLIRALE 433
Score = 73 (30.8 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 47 KLKSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEPRIPPYVKRIKINLPNKETKIS 106
+L + F S + +G N F A K YL ++ VK +K N KE +S
Sbjct: 47 RLSDKILEFFSPYAYIRFREIEGYRYNYAFAAVKTYLGAKVNSEVKNLKGNQV-KEN-MS 104
Query: 107 CSVEKDE-EIVDVFNGVQLKW 126
+++D+ +I + + GV++ W
Sbjct: 105 LDLKRDDVKIEEEYEGVKMWW 125
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 161/355 (45%), Positives = 226/355 (63%)
Query: 82 YLEPRIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHP 141
YL +I P ++++ ++ + + E + DV+ G++LKWR+ + V
Sbjct: 57 YLSSKISPDASKLRMTRDPNNKNVNLHLSQGEVVSDVYKGIELKWRYLEGRNKKTTVVGE 116
Query: 142 DHYNPVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHG 201
+ +V + CFELSF KK+K +V+ SYI +V R +MH
Sbjct: 117 ETEEAIVNWQ--CFELSFDKKHKDLVVKSYIAYVERKAKVIKEER--------RIIKMHS 166
Query: 202 MRGDV--WQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLY 259
WQSV +HP+TF T+AM +K +M+DL+RF+KRK++Y+ VGKAWKR Y LY
Sbjct: 167 YSSYTLRWQSVKFEHPSTFHTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLY 226
Query: 260 GPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIEL 319
GPPGTGKSSL+AAMANYL FD+YDL+L N++G+ +LR+LL+AT N SIL+VEDIDCS++L
Sbjct: 227 GPPGTGKSSLVAAMANYLKFDIYDLQLANVQGDAQLRSLLLATNNSSILLVEDIDCSVDL 286
Query: 320 QDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKD 379
R A T L + P +TLSG+LN IDGLWSSCGDERI+IFTTN+K+
Sbjct: 287 PTRLQPATTT----LGAPK-----GSTP-LTLSGLLNCIDGLWSSCGDERIVIFTTNNKE 336
Query: 380 RLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITE-----HPLFLEVEGLIE 429
LDPA LRPG MD+HI++ +C+ GFK+LAS+YLG+ H L+ +++ LI+
Sbjct: 337 VLDPALLRPGCMDMHIYLGHCSFEGFKILASNYLGMPHDSDDPHRLYPDIKRLID 391
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 152/316 (48%), Positives = 210/316 (66%)
Query: 153 RCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGM-RGDVWQSVN 211
+ +L+FH++ + +V +SYI +V FT G + W+ ++
Sbjct: 136 KTLKLTFHRRSRDIVTNSYIKYVVEEGKSIDAKNKKMKLFTNNPSSHWGSSKTSFWRYID 195
Query: 212 LDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIA 271
+HPATF+TLAMD K+ I++DL F K++Y+ +GKAWKRGYLLYGPPGTGKS++IA
Sbjct: 196 FEHPATFETLAMDPKKKEQILNDLAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIA 255
Query: 272 AMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNA 331
AMAN LN+ +YDLELT ++ N ELR +L AT NKSI+V+EDIDCS++L + K K +N
Sbjct: 256 AMANLLNYSIYDLELTAIQNNSELRKILTATSNKSIIVIEDIDCSLDLTGK-RKKKESNL 314
Query: 332 MDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRM 391
M N VTLSG+LNFIDG+WS+CG ERII+FTTNH +LDPA +R GRM
Sbjct: 315 MIWRKDGDQDNEENKSFVTLSGLLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRM 374
Query: 392 DVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMR-NEVPEI 450
D+HI +SYCT FK LA +YL + HPLF ++E L+++ + PADVAE LM+ N +
Sbjct: 375 DMHIELSYCTFEAFKTLAKNYLDLDSHPLFSKIESLMKETNIAPADVAENLMKKNRETDA 434
Query: 451 --ALRELIQFLEIKRR 464
+L +LI+ LE K++
Sbjct: 435 DGSLNDLIESLERKKK 450
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 177/446 (39%), Positives = 259/446 (58%)
Query: 35 YLPFEVRAYF--AVK--LKSLLARFSSELTLVINEYD-DGLNQNVLFKAAKLYLEPRIPP 89
++P+++R Y ++ L L R S+ + + EY +GL+++ + YL
Sbjct: 14 FVPYQLREYLENTIQKYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAYDEIGNYLSSISTA 73
Query: 90 YVKRIKIN-LPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYNPVV 148
KR+K N ++ + C ++ DE +V VF GV + W SS V E D +N
Sbjct: 74 RAKRLKAKESENSKSLVLC-LDDDEAVVVVFQGVNVVW--SSTVVDKE-----DKHN--- 122
Query: 149 KSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRGD-VW 207
E R L+F ++ ++ ++YI HV +T + + +W
Sbjct: 123 SKEGRYLTLTFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNNDSSSYSSWWEGLW 182
Query: 208 QSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKS 267
+V +H A+F+TL MD D K+ I DL +F K K++YR V K WKRGYLL+GPPGTGKS
Sbjct: 183 SNVPFNHHASFETLGMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPGTGKS 242
Query: 268 SLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAK 327
++I+A+AN+L +DVYDLELT ++ N EL+ L++ T+ KSI+V+EDIDCS+EL + K K
Sbjct: 243 TMISAIANFLEYDVYDLELTTVKDNAELKKLMLDTKGKSIVVIEDIDCSLELTEHRKKKK 302
Query: 328 ATNAMDLNVIQPVMNLNQVP-----QVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLD 382
+ D + NL +V VTLSG+LN IDGLWS+C DE+IIIFTTN D LD
Sbjct: 303 EEDE-DKEEKKEAENLKRVSGNNESNVTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLD 361
Query: 383 PAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQL 442
PA +R GRMD HI MSYC FK+LA +YL H L+ E+ L+E+ V+PADVAE L
Sbjct: 362 PALIRRGRMDYHIEMSYCRFEAFKVLAKNYLENESHDLYGEIGRLLEEVDVSPADVAENL 421
Query: 443 MRN---EVPEIALRELIQFLEIKRRE 465
M + +I R L++ LE ++++
Sbjct: 422 MPKSDEDDADICFRRLVKSLEEEKKK 447
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 166/440 (37%), Positives = 258/440 (58%)
Query: 26 MVIRSITHDYLPFEVRAYFAVKLKSLLAR-FSSELTLVINEYDDGLNQNVLFKAAKLYLE 84
M+ R+I ++ +P +R Y A+K + F S+ T VI + + + +N F+AA++YL
Sbjct: 26 MLFRTILNEIVPKRIREYIAMKAVDFFSSYFQSDFTFVIEQRWEFV-ENQTFRAAEVYL- 83
Query: 85 PRIPPYVKRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHY 144
P + K+ + + K + K + + ++ F + E H
Sbjct: 84 PTCLAGLSTGKLLVGSSNLKNPAAEPK----LGIPVNTKIIDNFEG--IHLEWTLHSVET 137
Query: 145 NPVVKSEDRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRG 204
+ E R F L+ K++++ +M Y ++ +T DR
Sbjct: 138 KKYLP-EKRYFHLTCKKEFREKIMTDYFTYLAKSAEKIMSHRENLKIYTYNQDRSK---- 192
Query: 205 DVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGT 264
W+S +H TF+TLA++ D+K+ ++DDL+ F K K+F+++VG+AWKRGYLLYGPPGT
Sbjct: 193 --WESAIFEHHTTFETLAVEPDLKKTLIDDLDAFSKGKDFFKSVGRAWKRGYLLYGPPGT 250
Query: 265 GKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFA 324
GKSS++AA+AN++ + +YDL++ ++R + ELR +L +T+N+SIL++EDIDC + R
Sbjct: 251 GKSSMVAAIANHMKYHIYDLQIQSVRDDGELREILTSTKNRSILLIEDIDCGADASRRRQ 310
Query: 325 KAKATNAMDLNVIQPVMNLNQVPQ-VTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDP 383
K + +P + ++LSG+LNF+DGLWSSCG+E+IIIFTTNHK++LDP
Sbjct: 311 SKKKEEDGGEDDGEPQKRKKKFEVGISLSGLLNFVDGLWSSCGEEKIIIFTTNHKEKLDP 370
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLM 443
A LRPGRMDVHI M CT FK L + YL EH LF +E LI + TPA+V +QLM
Sbjct: 371 ALLRPGRMDVHILMDNCTPFVFKKLVALYLKTDEHVLFDPIEKLILEVSSTPAEVTQQLM 430
Query: 444 RNEVPEIALRELIQFLEIKR 463
++ +IAL+ L +FLE K+
Sbjct: 431 ASKNADIALKGLAEFLENKK 450
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 152/321 (47%), Positives = 216/321 (67%)
Query: 147 VVKSE-DRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRGD 205
VV ++ +R ++L+FH + + ++ +SYI +V FT +
Sbjct: 134 VVDNDGNRYYKLTFHNRARTLITNSYIKYVVEEGKSIIVKNKQTRLFTNNLSTQWVFGQN 193
Query: 206 VWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTG 265
+W+S+ +HPA+F TLAMD K+ I++DL F KE+Y+ +GKAWKRGYLLYGPPGTG
Sbjct: 194 MWRSIEFEHPASFQTLAMDPKKKEEIVNDLIAFSNGKEYYKKIGKAWKRGYLLYGPPGTG 253
Query: 266 KSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAK 325
KS++I+AMAN LN+++YDLELT ++ N EL+ LL AT +KSI+V+EDIDCS + K
Sbjct: 254 KSTMISAMANLLNYNIYDLELTAVKNNSELKKLLTATSSKSIIVIEDIDCSADFTSNRIK 313
Query: 326 AKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAF 385
K +N+ + + + N V TLSG+LNFIDG+WS+CG ERI++FTTNH ++LDPA
Sbjct: 314 -KESNSRE-RYGKEDKDENSV---TLSGLLNFIDGIWSACGQERIVVFTTNHLEKLDPAL 368
Query: 386 LRPGRMDVHIHMSYCTSCGFKMLASSYL---GITEHPLFLEVEGLIEKAKVTPADVAEQL 442
+R GRMD+HI +SYCT FK+LA +YL G HPLF E++ L+E+ K++PADVAE L
Sbjct: 369 IRRGRMDMHIELSYCTYEAFKILAKNYLDLDGDDAHPLFSEIKALLEETKISPADVAENL 428
Query: 443 M-RNEVPEI--ALRELIQFLE 460
M RN+ ++ +L LI LE
Sbjct: 429 MARNQQIDVDKSLNLLISALE 449
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 123/241 (51%), Positives = 176/241 (73%)
Query: 223 MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVY 282
M+ ++K ++ DL+ F K+F++ VG+AWKRGYLLYGPPGTGKSSL+AA+AN++N+ +Y
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 283 DLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMN 342
DL++ +++ + LR +L +TEN+SIL++ED+DCS D + + + + Q
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSILLIEDLDCSGA--DTTCRKENKDETEYGENQNKKK 118
Query: 343 LNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTS 402
P+VTLSG+LNF+DGLWSSC +ERIIIFTTNHK++LDPA LRPGRMDVHI M YCT
Sbjct: 119 KKD-PKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCTP 177
Query: 403 CGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRNEVPEIALRELIQFLEIK 462
FK LA+ YL I EH LF +E + + K TPA++ E+LM ++ P++ L+ L++FLE K
Sbjct: 178 IVFKKLAALYLEIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKGLVEFLESK 237
Query: 463 R 463
+
Sbjct: 238 K 238
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 363 (132.8 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
Identities = 87/287 (30%), Positives = 148/287 (51%)
Query: 36 LPFEVRAYFAVKL--KSLLARFSSELTLVINEYDDGLNQNVLFKAAKLYLEPRIPPYVKR 93
L F+ + VKL + ++ F + E++D + +N L++ +YL +
Sbjct: 24 LLFKTGLIYMVKLWRRKIIDWFHVYQFYKVPEFNDNVQENHLYQKVYMYLNS-LSSIENS 82
Query: 94 IKINL--PNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYNPVVKSE 151
NL K +I +++++ + D F G ++ W ++ D +
Sbjct: 83 DFTNLFTGKKSNEIILRLDRNQVVGDEFLGARVCW-----------INGED------EDG 125
Query: 152 DRCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXF-TLRYD---RMHGMRGDVW 207
R F L K K+ ++ SY+ H+ F + D + W
Sbjct: 126 ARNFVLKIRKADKRRILGSYLQHIHTVSDELEQRNTELKLFINVGIDDHLNKKKKKNGRW 185
Query: 208 QSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKS 267
+S+ DHP TFD +AM++D+K + DLE F+K K++Y +G+ WKR YLLYGP GTGKS
Sbjct: 186 RSIPFDHPCTFDNIAMETDLKNKVKSDLESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKS 245
Query: 268 SLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDID 314
S +AAMAN+L++DVYD++L+ + + +L+ LL+ T KS++V+ED+D
Sbjct: 246 SFVAAMANFLDYDVYDIDLSKVVDDSDLKMLLLQTRGKSVIVIEDLD 292
Score = 287 (106.1 bits), Expect = 7.8e-62, Sum P(2) = 7.8e-62
Identities = 67/158 (42%), Positives = 97/158 (61%)
Query: 310 VEDIDCSIELQDRFAKAKA--TNAMDLNVIQPV-MNLN-QVPQVTLSGMLNFIDGLWSSC 365
V DID S + D K T + VI+ + +L+ + V LSG+LNF D + SSC
Sbjct: 259 VYDIDLSKVVDDSDLKMLLLQTRGKSVIVIEDLDRHLSTKSTAVNLSGILNFTDSILSSC 318
Query: 366 -GDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEV 424
DERI++FT K+++DPA LRPGR+DVHIH C FK LA++YLG+ EH LF +V
Sbjct: 319 TADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFTAFKTLANNYLGVKEHKLFSQV 378
Query: 425 EGLIEK-AKVTPADVAEQLMRNE-VPEIALRELIQFLE 460
EG+ + A ++PA++ E ++ N P AL+ +I L+
Sbjct: 379 EGIFQNGASLSPAEIGELMIANRNSPTRALKHVINALQ 416
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 342 (125.4 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 68/166 (40%), Positives = 105/166 (63%)
Query: 153 RCFELSFHKKYKQVVMDSYIPHVXXXXXXXXXXXXXXXXFTLRYDRMHGMRGDVWQSVNL 212
+CFEL F +K++ +V DSYIP V T Y H D W++ L
Sbjct: 105 QCFELRFDEKHRDLVFDSYIPFVESKAKEIKSKKRILEMHT--YS--HCC--DTWETKIL 158
Query: 213 DHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAA 272
DH ++F+T+ M D+K+ ++DD++ F+ +++FY+ VG+ W R YLL+G PG GK+SL+AA
Sbjct: 159 DHHSSFETIVMKEDLKRRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAA 218
Query: 273 MANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIE 318
+A YLNFDVY++ ++ + + R L+ E+ SIL+VEDID S+E
Sbjct: 219 IAKYLNFDVYNIT-QGVKTDFDTRRLIRRVEDSSILLVEDIDTSLE 263
Score = 206 (77.6 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 46/123 (37%), Positives = 77/123 (62%)
Query: 348 QVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKM 407
+V LS +L+ + WS+ G R++IFTTN+K+R D L RM++ I+M +C FK
Sbjct: 266 KVALSQLLSSLTWPWSN-GKARVVIFTTNNKERFDQTLLC--RMEMKIYMGHCCFEDFKT 322
Query: 408 LASSYLGITE-----HPLFLEVEGLIEKAKVTPADVAEQLMRNEVPEIALRELIQFLEIK 462
LAS+YLGI+ H L+ +++ LI+ VTP V E+LM+++ ++AL+ L+++ K
Sbjct: 323 LASNYLGISHDNDAPHRLYPDIKRLIDGQAVTPGQVVEELMKSQDVDVALQSLVRYSSSK 382
Query: 463 RRE 465
+
Sbjct: 383 END 385
Score = 97 (39.2 bits), Expect = 9.8e-20, Sum P(2) = 9.8e-20
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 104 KISCSVEKDEEIVDVFNGVQLKWR-FSSKQVPTEMVHHPDHYNPVVKSEDRCFELSFHKK 162
KI+ ++ E D++ G +LKWR F K N + +CFEL F +K
Sbjct: 68 KINLDFVEEREFDDIYQGAKLKWRIFVDK-------------NNIGNIPKQCFELRFDEK 114
Query: 163 YKQVVMDSYIPHV 175
++ +V DSYIP V
Sbjct: 115 HRDLVFDSYIPFV 127
Score = 49 (22.3 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 22/101 (21%), Positives = 45/101 (44%)
Query: 52 LARFSSELTLVINEYDDGLNQNVLFKAAKLYLEPRIP-PYVKRIKINLPNKETKISCSVE 110
L +++T++I E + NV+ A + YL +I +V+ + + + K+ +
Sbjct: 34 LTHHDNQVTVIIEETSENGRINVIHGATQAYLFDKINLDFVEEREFDDIYQGAKLKWRIF 93
Query: 111 KDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYNPVVKSE 151
D+ + + RF K ++V D Y P V+S+
Sbjct: 94 VDKNNIGNIPKQCFELRFDEKH--RDLVF--DSYIPFVESK 130
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 318 (117.0 bits), Expect = 3.5e-28, P = 3.5e-28
Identities = 90/283 (31%), Positives = 142/283 (50%)
Query: 193 TLRYDRMHGMRGDVWQSVNLDHPAT---FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVG 249
TL Y M G W+ HP ++ +D ++I+ D+++F+ ++Y + G
Sbjct: 184 TLIYTSM----GTDWR--RFGHPRRKRPISSVILDKGKSELIIQDVKKFLNNSDWYNDRG 237
Query: 250 KAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSIL 308
++RGYLLYGPPGTGKSS I A+A L + L L + L LL +SI+
Sbjct: 238 IPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSII 297
Query: 309 VVEDIDCSIEL--QDRFAKAKATNAMDLNV----IQPVMNLNQVPQ----VTLSGMLNFI 358
++EDID +I+ D AK+ + NA ++ Q V +T SG+LN +
Sbjct: 298 LLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSVSSGGSALTFSGLLNAL 357
Query: 359 DGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEH 418
DG+ +S G RI+ TTNH ++LD +RPGR+D+ I + C+S + + + T+
Sbjct: 358 DGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSYQMEQMFLKFYP-TDF 414
Query: 419 PLFLEVEGLIEKAKVTPADVAEQLM---RNEVPEIA-LRELIQ 457
L + +E K +PA + M N + I L ELI+
Sbjct: 415 DLAKQFVEKLENYKFSPAQLQAYFMTYSNNSIEAINNLNELIK 457
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 298 (110.0 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 73/184 (39%), Positives = 108/184 (58%)
Query: 220 TLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNF 279
++ +D Q I+ D + F+K +Y G ++RGYLLYGPPG GKSS I A+A L +
Sbjct: 191 SVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGELEY 250
Query: 280 DVYDLELTNLRGNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
V L L+ RG + L +LL +SI+++EDID + R A + +A D
Sbjct: 251 SVCLLNLSE-RGLTDDRLNHLLNVAPEQSIILLEDIDAAFV--SREATPQQKSAFD---- 303
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
LN++ T SG+LN +DG+ S+ + RI+ TTN+ DRLDPA +RPGR+D+ ++
Sbjct: 304 ----GLNRI---TFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYI 354
Query: 398 SYCT 401
YCT
Sbjct: 355 GYCT 358
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 296 (109.3 bits), Expect = 5.0e-25, P = 5.0e-25
Identities = 80/251 (31%), Positives = 132/251 (52%)
Query: 199 MHGMRGDVWQSVNLDHPAT-FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYL 257
M+ G W++ D++ + + I+ D+ F+ ++Y + G ++RGYL
Sbjct: 168 MYTAVGSEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYL 227
Query: 258 LYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCS 316
LYGPPG GKSS I A+A L + L LT+ + L +LL +S++++ED+D +
Sbjct: 228 LYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Query: 317 IELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTN 376
F + DL V PV + ++T SG+LN +DG+ S+ + RI+ TTN
Sbjct: 288 ------FL------SRDLAVENPV-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTN 332
Query: 377 HKDRLDPAFLRPGRMDVHIHMSYCTSCGF-KMLASSYLGITEHPLFLE--VEGLIEK-AK 432
H DRLDPA +RPGR+D+ ++ YC+ +M Y G + P E E +++ ++
Sbjct: 333 HIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPG--QAPSLAENFAEHVLKATSQ 390
Query: 433 VTPADVAEQLM 443
++PA V M
Sbjct: 391 ISPAQVQGYFM 401
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 198 (74.8 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 50/156 (32%), Positives = 90/156 (57%)
Query: 214 HPAT---FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLI 270
HP + ++ ++S++K+MI DD+ F++ ++Y G ++RGYLLYGPPG+GK+S +
Sbjct: 200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFL 259
Query: 271 AAMANYLNFDVYDLELTNLRGNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKA 328
A+A L++D+ L L +G + L +LL K+++++ED+D + + ++R +
Sbjct: 260 YALAGELDYDICVLNLAE-KGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRERSGEVG- 317
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSS 364
+ N VT SG+LN +DG+ SS
Sbjct: 318 ------------FHAN----VTFSGLLNALDGVTSS 337
Score = 153 (58.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 40/114 (35%), Positives = 62/114 (54%)
Query: 349 VTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKML 408
VT SG+LN +DG+ SS DERII TTNH ++LDPA +RPGR+DV ++ T + +
Sbjct: 322 VTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREM 379
Query: 409 ASSYLGIT-------------EHPLFLEVEGLIEKAKVTPADVAEQLMRNEVPE 449
+ + G + ++ ++GL K +PAD + M E+P+
Sbjct: 380 FTRFYGHSPEMADDLSDIVCPKNTSMASLQGLFVMNKSSPADAVD--MAKELPD 431
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 290 (107.1 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 76/230 (33%), Positives = 125/230 (54%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
+++ + + I+ D++ F+ ++Y + G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 NSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 248
Query: 279 FDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
+ L LT+ + L +LL +S++++ED+D + F + DL V
Sbjct: 249 HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA------FL------SRDLAVE 296
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
PV + ++T SG+LN +DG+ S+ + RI+ TTNH DRLDPA +RPGR+D+ ++
Sbjct: 297 NPV-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYV 353
Query: 398 SYCTSCGF-KMLASSYLGITEHPLFLE--VEGLIEKA-KVTPADVAEQLM 443
YC+ +M Y G + P E E ++ +++PA V M
Sbjct: 354 GYCSHWQLTQMFQRFYPG--QAPSLAENFAEHVLRATNQISPAQVQGYFM 401
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 289 (106.8 bits), Expect = 5.9e-24, P = 5.9e-24
Identities = 78/251 (31%), Positives = 132/251 (52%)
Query: 199 MHGMRGDVWQSVNLDHPAT-FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYL 257
M+ G W++ D++ + + I+ D+ F+ ++Y + G ++RGYL
Sbjct: 168 MYTAVGSEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYL 227
Query: 258 LYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCS 316
LYGPPG GKSS I A+A L + L LT+ + L +LL +S++++ED+D +
Sbjct: 228 LYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Query: 317 IELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTN 376
F + DL V P+ + ++T SG+LN +DG+ S+ + RI+ TTN
Sbjct: 288 ------FL------SRDLAVENPI-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTN 332
Query: 377 HKDRLDPAFLRPGRMDVHIHMSYCTSCGF-KMLASSYLGITEHPLFLE--VEGLIEK-AK 432
+ DRLDPA +RPGR+D+ ++ YC+ +M Y G + P E E +++ ++
Sbjct: 333 YIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPG--QAPSLAENFAEHVLKATSE 390
Query: 433 VTPADVAEQLM 443
++PA V M
Sbjct: 391 ISPAQVQGYFM 401
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 290 (107.1 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 68/187 (36%), Positives = 111/187 (59%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T D++ +D +K+ I++D++ F+ + +Y + G ++RGYLLYGPPGTGKSS I A+A
Sbjct: 248 TLDSVILDKGVKERIVEDVKDFLATESWYHDRGIPYRRGYLLYGPPGTGKSSFIQAVAGE 307
Query: 277 LNFDVYDLELTNLRGNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDL 334
L++D+ L L+ RG + L LL ++++++ED+D + F+ + D
Sbjct: 308 LDYDIAILNLSE-RGMTDDRLNRLLTIVPKRTLVLLEDVDAA------FSNRRTQTDED- 359
Query: 335 NVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVH 394
N VT SG+LN +DG+ S+ +ERI+ TTNH +RLD A +RPGR+D+
Sbjct: 360 ----GYRGAN----VTFSGLLNALDGVASA--EERIVFLTTNHVERLDEALVRPGRVDMT 409
Query: 395 IHMSYCT 401
+ + T
Sbjct: 410 VRIGELT 416
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 285 (105.4 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 81/261 (31%), Positives = 140/261 (53%)
Query: 199 MHGMRGDVWQSV-NLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYL 257
++G G+ W+ N + ++ + D+K +++D++ F+ + +YRN G ++RGYL
Sbjct: 167 INGGNGN-WERFGNPRSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYL 225
Query: 258 LYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCS 316
LYG PG GKSSLI A+A LN D+ + L++ + ++ +LL KSIL++EDID +
Sbjct: 226 LYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAA 285
Query: 317 IELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTN 376
K+ N +D N N N +T SG+LN +DG+ S G RI+ TTN
Sbjct: 286 F-------KSHRDN-VDSNN----NNSNNNNSLTYSGLLNALDGVASQEG--RILFMTTN 331
Query: 377 HKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGI-TEHPLFLEVEGLIEKAKVTP 435
+ LD A +R GR+D+ I +S T L + + + T++ L + + +++
Sbjct: 332 KIELLDSALIREGRIDLKIKVSNATKSQAAQLFTHFYNLPTDNQLAIRFSENLHDHQLSM 391
Query: 436 ADVAEQLMRN-EVPEIALREL 455
+ + L++ PE A+ E+
Sbjct: 392 SQIQGFLLKYINSPEKAIEEV 412
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 284 (105.0 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 77/241 (31%), Positives = 129/241 (53%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
+++ ++ + I+ D+ F+ ++Y + G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 NSVVLEQGLADRIVRDIREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELQ 248
Query: 279 FDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
+ L LT+ + L +LL +S++++ED+D + +D A+
Sbjct: 249 HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAE------------ 296
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
PV + ++T SG+LN +DG+ S+ + RI+ TTNH DRLDPA +RPGR+D+ ++
Sbjct: 297 NPV-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYV 353
Query: 398 SYCTSCGF-KMLASSYLGITEHPLFLEV---EGLIEKAKVTPADVAEQLM--RNEVPEIA 451
+C+ +M Y G + P E L +++PA V M +N+ PE A
Sbjct: 354 GHCSRWQLTQMFQRFYPG--QAPSLAESFADRALQATTQISPAQVQGYFMLYKND-PEGA 410
Query: 452 L 452
+
Sbjct: 411 V 411
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 283 (104.7 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 79/253 (31%), Positives = 129/253 (50%)
Query: 199 MHGMRGDVWQSVNLDH---PATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRG 255
M+ G W+ P T ++ + + I+ D+ F+ ++Y + G ++RG
Sbjct: 168 MYTAMGSEWRPFGYPRRRRPLT--SVVLGQGLADRIVRDVREFIDNPKWYTDRGIPYRRG 225
Query: 256 YLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDID 314
YLLYGPPG GKSS I A+A L + L LT+ + L +LL +S++++ED+D
Sbjct: 226 YLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVD 285
Query: 315 CSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFT 374
+ +D A+ PV + ++T SG+LN +DG+ S+ + RI+ T
Sbjct: 286 AAFLSRDLAAE------------NPV-KYQGLGRLTFSGLLNALDGVAST--EARIVFMT 330
Query: 375 TNHKDRLDPAFLRPGRMDVHIHMSYCTSCGF-KMLASSYLGITEHPLFLEV-EGLIEKA- 431
TNH DRLDPA +RPGR+D+ ++ YC+ +M Y G + P E G + +
Sbjct: 331 TNHVDRLDPALIRPGRVDMKEYVGYCSHWQLTQMFQRFYPG--QAPSLAEAFAGRVLQVT 388
Query: 432 -KVTPADVAEQLM 443
+++PA V M
Sbjct: 389 TQISPAQVQGYFM 401
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 289 (106.8 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 75/233 (32%), Positives = 121/233 (51%)
Query: 207 WQSVNLDHPATFDTLAMDSDMKQMIMDDLERFV--KRKEFYRNVGKAWKRGYLLYGPPGT 264
W P T+ +D K +DD++ ++ + + +Y N G ++RGYLL+GPPGT
Sbjct: 262 WSRCMARAPRALSTVVLDKAQKDAFIDDIKDYLHPRTRRWYNNRGIPYRRGYLLHGPPGT 321
Query: 265 GKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCSIELQDRF 323
GK+SL A A L ++Y L L++ EL L + I+++ED+DC+ Q R
Sbjct: 322 GKTSLCFAAAGLLGLELYLLNLSSKSLDEDELMALFTDLPTRCIVLLEDVDCAGMSQKR- 380
Query: 324 AKAKATNAMDLNVIQPVMN----------------LNQVPQVTLSGMLNFIDGLWSSCGD 367
++N + N P + + + V+LSG+LN IDG+ ++C +
Sbjct: 381 TPGSSSNDDNGNSASPELQEQGEGNSSGTTTGGTGVFEKQGVSLSGLLNVIDGV-AAC-E 438
Query: 368 ERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPL 420
RI++ TTNH ++LDPA +RPGR+D+ I + T+ K L S+ E L
Sbjct: 439 GRILVMTTNHPEKLDPALVRPGRIDLSIAFGHSTTSDIKELFSAIYSTLEGDL 491
Score = 37 (18.1 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 163 YKQVVMDSYIPHV 175
Y Q+ + SYIP++
Sbjct: 47 YLQIDLSSYIPYL 59
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 182 (69.1 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 39/111 (35%), Positives = 68/111 (61%)
Query: 207 WQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGK 266
W+ + + D++ +D ++ + +++DL F+ K++Y + G ++RGYLLYGPPG+GK
Sbjct: 236 WECIACQNKRLVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGK 295
Query: 267 SSLIAAMANYLNFDVYDLELTNLRGNMELRNL--LIATENK-SILVVEDID 314
+S I +MA NF + + N+ + N+ +I NK +ILV+EDID
Sbjct: 296 TSFILSMAG--NFGK-SISIMNMSKGIHDGNIHSIIQKCNKDTILVLEDID 343
Score = 156 (60.0 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 32/90 (35%), Positives = 53/90 (58%)
Query: 349 VTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKML 408
+T SG+LN IDGL SS D RI++ TTNH +RL PA +RPGR+D+ + Y ++ +++
Sbjct: 360 LTFSGLLNAIDGLASS--DGRILMMTTNHLERLSPALIRPGRIDLKVKFDYASNHQIELM 417
Query: 409 ASSYLGITEHPLFLEVEGLIEKAKVTPADV 438
+ H L + +E +++ A +
Sbjct: 418 FKRFFDQKYHYLIDSINSKLENHQISTAQL 447
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 200 (75.5 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 53/147 (36%), Positives = 85/147 (57%)
Query: 220 TLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNF 279
++ +DS +K+ I+DD+ F+K ++Y + G ++RGYLLYGPPG+GK+S I A+A L++
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 280 DVYDLELT--NLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
++ L L+ NL + L +L+ +SIL++EDID + F K T +
Sbjct: 287 NICILNLSENNLTDD-RLNHLMNNMPERSILLLEDIDAA------FNKRSQTGEQGFH-- 337
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSS 364
VT SG+LN +DG+ SS
Sbjct: 338 ---------SSVTFSGLLNALDGVTSS 355
Score = 132 (51.5 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 349 VTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGF-KM 407
VT SG+LN +DG+ SS +E I TTNH ++LD A +RPGR+D + + T KM
Sbjct: 340 VTFSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNATPYQVEKM 397
Query: 408 LASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQ---LMRNEVPEIALR 453
Y G T+ + + +++ +T + Q +M + P AL+
Sbjct: 398 FMKFYPGETD--ICKKFVNSVKELDITVSTAQLQGLFVMNKDAPHDALK 444
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 280 (103.6 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 76/241 (31%), Positives = 130/241 (53%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
+++ +D + + +++D + F+ +Y + G ++RGYL YGPPGTGKSS I+A+A++
Sbjct: 209 ESVILDGRICEELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTGKSSFISALASHFG 268
Query: 279 FDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCS-IELQDRFAKAKATNAMDLNV 336
+ V L L+ + L +LL S++++EDID + + +D + A +
Sbjct: 269 YSVCLLSLSERTLDDDRLNHLLNTAPPNSVVILEDIDAAFVSREDPMSNHPAYQGLS--- 325
Query: 337 IQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIH 396
+VT SG+LN +DG+ +C +ER+ TTN+ +RLDPA +RPGR+D +
Sbjct: 326 -----------RVTFSGLLNALDGV--ACAEERLTFMTTNYVERLDPALIRPGRVDRKQY 372
Query: 397 MSYCTSCGF--KMLASSYLGITEHPLFLE-VEGLIE-KAKVTPADVAEQ-LMRNEVPEIA 451
T G KM + Y ++ L E V+ + E K +++PA + LM + P A
Sbjct: 373 FGNATD-GMLSKMFSRFYRQPSDSVLADEFVKRVSEHKTELSPAMIQGHFLMYKQDPRAA 431
Query: 452 L 452
L
Sbjct: 432 L 432
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 282 (104.3 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 89/280 (31%), Positives = 138/280 (49%)
Query: 196 YDRMHGMRGDV-WQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKR--KEFYRNVGKAW 252
Y M +R V W + T+ +DS K+ ++DD+ +++ +++Y N G +
Sbjct: 192 YRAMSNVRDLVRWNRITTRPSRAISTVILDSCKKKAVLDDMREYLREDTRQWYANHGIPY 251
Query: 253 KRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELT--NLRGNMELRNLLIATENKSILVV 310
+RGYL GPPGTGK+SL +A+A D+Y L L N+ + LR L + ++++
Sbjct: 252 RRGYLFSGPPGTGKTSLSSALAGVFGLDIYVLSLLDPNISESHFLR-LFSEVPTQCVVLL 310
Query: 311 EDIDCS-IELQ---DRFAKAKATNAMDLNVIQ-----PVMNLNQVPQVTLSGMLNFIDGL 361
EDID + + L+ + A T + D+ + PV P ++LS +LN IDG+
Sbjct: 311 EDIDAAGMTLKRANEEPVTADTTASFDVMKKRARPGAPVPTSPPTP-ISLSALLNAIDGV 369
Query: 362 WSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLF 421
S G RI+I TTN LDPA +RPGR+D+HI + F+ L S
Sbjct: 370 SSQEG--RILIMTTNAPQDLDPALIRPGRVDMHIRFELPSRVEFRELFRSMFSDAPSGPD 427
Query: 422 LEVEGLIEKAKVTPADVAEQLMRNEVPEIALRELIQ-FLE 460
EV+G E + A E+ + + I L L Q F E
Sbjct: 428 SEVKG--ESDIGSDALKLEETKKKNIDMIDLDRLAQEFAE 465
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 277 (102.6 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 62/184 (33%), Positives = 108/184 (58%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
+++ ++ + + I+ D+ F+ ++Y + G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 NSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQ 248
Query: 279 FDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
+ L LT+ + L +LL +S++++ED+D + +D A+
Sbjct: 249 HSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAAE------------ 296
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
P+ + ++T SG+LN +DG+ S+ + RI+ TTNH DRLDPA +RPGR+D+ ++
Sbjct: 297 NPI-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYV 353
Query: 398 SYCT 401
+C+
Sbjct: 354 GHCS 357
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 274 (101.5 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 64/205 (31%), Positives = 112/205 (54%)
Query: 199 MHGMRGDVWQSVNLDHPAT-FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYL 257
M+ G W+ ++ ++ + + +++D++ F+ ++Y G ++RGYL
Sbjct: 168 MYTAMGTEWRQFGFPRRRRPLSSVVLEKGVSERLVEDVKEFIDNPKWYIERGIPYRRGYL 227
Query: 258 LYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCS 316
LYGPPG GKSS I A+A L + L L++ + L LL +SI+++ED+D +
Sbjct: 228 LYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDDRLNYLLSVAPQQSIILLEDVDAA 287
Query: 317 IELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTN 376
+D A+ P M + ++T SG+LN +DG+ S+ + RI+ TTN
Sbjct: 288 FVSRDLAAE------------NPAM-YQGMGRLTFSGLLNALDGVAST--EARIVFMTTN 332
Query: 377 HKDRLDPAFLRPGRMDVHIHMSYCT 401
+ DRLDPA +RPGR+D+ ++ +C+
Sbjct: 333 YVDRLDPALVRPGRVDLKQYVGHCS 357
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 273 (101.2 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 66/206 (32%), Positives = 113/206 (54%)
Query: 199 MHGMRGDVWQSVNLDHPAT-FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKA-WKRGY 256
M+ G W+ ++ ++ + + +++D++ F+ ++Y GKA +RGY
Sbjct: 168 MYTAMGTEWRQFGFPRRRRPLSSVVLEKGVSERLVEDVKEFIDNPKWYIERGKAPVRRGY 227
Query: 257 LLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDC 315
LLYGPPG GKSS I A+A L + L L++ + L LL +SI+++ED+D
Sbjct: 228 LLYGPPGCGKSSFITALAGELQHSICLLSLSDRSLSDDRLNYLLSVAPQQSIILLEDVDA 287
Query: 316 SIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTT 375
+ +D A+ P M + ++T SG+LN +DG+ S+ + RI+ TT
Sbjct: 288 AFVSRDLAAE------------NPAM-YQGMGRLTFSGLLNALDGVAST--EARIVFMTT 332
Query: 376 NHKDRLDPAFLRPGRMDVHIHMSYCT 401
N+ DRLDPA +RPGR+D+ ++ +C+
Sbjct: 333 NYVDRLDPALVRPGRVDLKQYVGHCS 358
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 273 (101.2 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 65/205 (31%), Positives = 114/205 (55%)
Query: 199 MHGMRGDVWQSVNLDHPAT-FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYL 257
M+ G W+ ++ ++S + + I+DD++ F+ ++Y + G ++RGYL
Sbjct: 168 MYTAMGAEWRPFGFPRRRRPLSSVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYL 227
Query: 258 LYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCS 316
LYGPPG GKSS I A+A L + + + L++ + L +LL +SI+++ED+D +
Sbjct: 228 LYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAA 287
Query: 317 IELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTN 376
F + L P+ + ++T SG+LN +DG+ SS + RI+ TTN
Sbjct: 288 ------FVSREL-----LPTENPLA-YQGMGRLTFSGLLNALDGVASS--EARIVFMTTN 333
Query: 377 HKDRLDPAFLRPGRMDVHIHMSYCT 401
+RLDPA +RPGR+D+ ++ +C+
Sbjct: 334 FIERLDPALVRPGRVDLKQYVGHCS 358
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 48/69 (69%), Positives = 57/69 (82%)
Query: 347 PQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFK 406
PQV+LSG+L F+DGLWS+ +ERIIIFTTNHK++LDPAFLRPG+MDVHI M YCT FK
Sbjct: 25 PQVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGKMDVHILMDYCTPVVFK 84
Query: 407 MLASSYLGI 415
L + YL I
Sbjct: 85 KLDALYLDI 93
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 186 (70.5 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 48/149 (32%), Positives = 88/149 (59%)
Query: 199 MHGMRGDVWQSVNLDH-PATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYL 257
++ ++G W + L ++ + +K+ I++D++ F+ R ++Y + G ++R YL
Sbjct: 217 VYNIQGMSWAQLGLPRRKRPLASVVFEKGLKEAIVEDVQDFLSRHQWYADRGIPYRRTYL 276
Query: 258 LYGPPGTGKSSLIAAMANYLNFDVYDLELTNL--RG--NMELRNLLIATENKSILVVEDI 313
L+GPPG+GKSS I A+A L+ Y+L + NL RG + +L N+L+ +SIL++ED+
Sbjct: 277 LHGPPGSGKSSFIHALAGELD---YNLAIVNLVERGLTDDKLANMLMRLPPRSILLLEDV 333
Query: 314 DCSI----ELQ-DRFAKAKATNAMDLNVI 337
D + E+ D ++ A T + LNV+
Sbjct: 334 DVAFGNRQEMSPDGYSGATVTYSGLLNVL 362
Score = 139 (54.0 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 349 VTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCT 401
VT SG+LN +DG+ + G++RI TTN+ +RLDPA +RPGR+DV + + T
Sbjct: 353 VTYSGLLNVLDGM--AAGEDRIAFLTTNYVERLDPALIRPGRVDVKVRVGEAT 403
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 195 (73.7 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 52/147 (35%), Positives = 86/147 (58%)
Query: 220 TLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNF 279
++ +D + + I++D++ F+ E+Y G ++RGYLLYGPPG+GK+S I A+A L++
Sbjct: 214 SVILDEGIAENIVNDVKDFLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 273
Query: 280 DVYDLELT--NLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
++ L L+ NL + L +L+ N+SIL++ED+D + F K + TN N
Sbjct: 274 NICILNLSENNLTDD-RLNHLMNHIPNRSILLLEDVDAA------FNKREQTNDQGFN-- 324
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSS 364
N VT SG+LN +DG+ S+
Sbjct: 325 ----N-----GVTFSGLLNALDGVASA 342
Score = 127 (49.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 349 VTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCT 401
VT SG+LN +DG+ S+ +E I TTNH ++LDPA LRPGR+D + + T
Sbjct: 327 VTFSGLLNALDGVASA--EECITFMTTNHPEKLDPALLRPGRVDYKVMIDNAT 377
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 268 (99.4 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 62/212 (29%), Positives = 121/212 (57%)
Query: 204 GDVWQSV-NLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPP 262
G W+ N + +++ + ++ + I++D++ F+ ++Y + G ++R YLL+GPP
Sbjct: 201 GPEWRPFGNPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPP 260
Query: 263 GTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCSIELQD 321
G GKSSLI A+A Y +F++ + + ++ + +LL K+IL++EDID I + D
Sbjct: 261 GCGKSSLITALAGYFDFNICTININDIYLTDDRFIHLLATIPPKTILILEDIDF-IFIND 319
Query: 322 ---RFAKAKATNAMDLNVIQPVMNLNQVPQ--VTLSGMLNFIDGLWSSCGDERIIIFTTN 376
++ ++ + ++ N + + V+ SG+LN +DG+ ++ +ERII TTN
Sbjct: 320 PIMKYTNNDQNSSSNSSIFTGTNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIFMTTN 377
Query: 377 HKDRLDPAFLRPGRMDVHIHMSYCTSCGFKML 408
+ ++L P +RPGR+D+ I + Y +K +
Sbjct: 378 NIEKLPPTLIRPGRVDMKILIPYANIYQYKKM 409
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 268 (99.4 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 62/212 (29%), Positives = 121/212 (57%)
Query: 204 GDVWQSV-NLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPP 262
G W+ N + +++ + ++ + I++D++ F+ ++Y + G ++R YLL+GPP
Sbjct: 201 GPEWRPFGNPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPP 260
Query: 263 GTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCSIELQD 321
G GKSSLI A+A Y +F++ + + ++ + +LL K+IL++EDID I + D
Sbjct: 261 GCGKSSLITALAGYFDFNICTININDIYLTDDRFIHLLATIPPKTILILEDIDF-IFIND 319
Query: 322 ---RFAKAKATNAMDLNVIQPVMNLNQVPQ--VTLSGMLNFIDGLWSSCGDERIIIFTTN 376
++ ++ + ++ N + + V+ SG+LN +DG+ ++ +ERII TTN
Sbjct: 320 PIMKYTNNDQNSSSNSSIFTGTNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIFMTTN 377
Query: 377 HKDRLDPAFLRPGRMDVHIHMSYCTSCGFKML 408
+ ++L P +RPGR+D+ I + Y +K +
Sbjct: 378 NIEKLPPTLIRPGRVDMKILIPYANIYQYKKM 409
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 264 (98.0 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 68/200 (34%), Positives = 111/200 (55%)
Query: 204 GDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVK--RKEFYRNVGKAWKRGYLLYGP 261
G W S L T+ D +K+ ++ D+ ++ ++FY G ++RGYLL+GP
Sbjct: 239 GAHWDSTILRPTRPIQTVHFDEQVKKDLIADIINYLDPHTRDFYHQRGIPYRRGYLLHGP 298
Query: 262 PGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDC-SIELQ 320
PGTGK+SL A+A+ ++Y L + +L + EL ++ + I+++EDID I +
Sbjct: 299 PGTGKTSLSLALASMFKLELYLLHVPSLANDGELESMFDELPPRCIILLEDIDAVGIPRR 358
Query: 321 DRFAKAKATNAMDLNVIQP---VMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNH 377
+ A A+ T D + + N + + TLSG+LN +DG+ S G RI+ T+N
Sbjct: 359 NELA-ARMTGLDDKDDDEDDEDEENGSGRGRSTLSGLLNVLDGVASQEG--RIVFMTSNL 415
Query: 378 KDRLDPAFLRPGRMDVHIHM 397
D+LDPA +RPGR+D I +
Sbjct: 416 ADKLDPALVRPGRIDRKIFL 435
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 170 (64.9 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 42/139 (30%), Positives = 72/139 (51%)
Query: 198 RMHGMRGDVWQSVNLDHPAT-FDTLAMDSDMKQMIMDDLERFVKRK--EFYRNVGKAWKR 254
R HG W SV + P +T+ +D K ++ D+ +++ + +Y N G +R
Sbjct: 264 RRHGRHS--WTSV-ANRPVRPMNTVVLDQKQKTAVLSDMNEYLQPETPRWYANRGIPLRR 320
Query: 255 GYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNME-LRNLLIATENKSILVVEDI 313
GYL +GPPGTGK+SL A+A D+Y + L + + E L NL + ++++EDI
Sbjct: 321 GYLFHGPPGTGKTSLSFALAGVFGLDIYVVSLLEPQLSEEDLSNLFNCLPRRCVVLLEDI 380
Query: 314 DCS--IELQDRFAKAKATN 330
D + +++ + TN
Sbjct: 381 DTAGLTRTEEKIGHSVRTN 399
Score = 120 (47.3 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 349 VTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCT 401
++LSG+LN IDG+ S G R++I TTN + LD A +RPGR+D+ + S T
Sbjct: 442 ISLSGLLNAIDGVASHEG--RVLIMTTNRPESLDDALIRPGRVDLQVAFSNAT 492
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 218 (81.8 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 60/202 (29%), Positives = 100/202 (49%)
Query: 207 WQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKE--FYRNVGKAWKRGYLLYGPPGT 264
W+ V T+ +D + K ++ D+ +++ K +Y N G +RGYL +GPPGT
Sbjct: 258 WREVAKRPVRPISTVVLDQEQKTAVLSDMNEYLQPKTECWYSNRGIPLRRGYLFHGPPGT 317
Query: 265 GKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCS------- 316
GK+SL A+A ++Y + L + + +L L + I+++EDID +
Sbjct: 318 GKTSLSFALAGVFGLEIYVISLIEPQLSDEDLSTLFNGLPRRCIVLLEDIDTAGMSRAEG 377
Query: 317 -IELQDRFAKAKATNAMDLNVIQPVMNLNQVPQ--VTLSGMLNFIDGLWSSCGDERIIIF 373
I + + DL V + Q +++SG+LN IDG+ + G RI I
Sbjct: 378 EIRTETKTEGPSEWKVADLARALKVGRGHGDDQKGISMSGLLNVIDGVAAHEG--RIFIM 435
Query: 374 TTNHKDRLDPAFLRPGRMDVHI 395
TTN + LD A +R GR+D+ +
Sbjct: 436 TTNKPEILDEALIRSGRVDLQV 457
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 187 (70.9 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 50/130 (38%), Positives = 74/130 (56%)
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVV 310
++RGYLLYGPPG GKSS I A+A L + L LT+ + L +LL +S++++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 63
Query: 311 EDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERI 370
ED+D + F + DL V PV + ++T SG+LN +DG+ S+ + RI
Sbjct: 64 EDVDAA------FL------SRDLAVENPV-KYQGLGRLTFSGLLNALDGVAST--EARI 108
Query: 371 IIFTTNHKDR 380
+ TTNH DR
Sbjct: 109 VFMTTNHVDR 118
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 185 (70.2 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 50/195 (25%), Positives = 90/195 (46%)
Query: 51 LLARFSSELTLVINEYD-DGLNQNVLFKAAKLYLEPRIPPYVKRIKINLPNKETKISCSV 109
L+ S+ + + NEY +GL ++ F YL + R+K N K + S+
Sbjct: 37 LMGWVSNSVHIKFNEYSGEGLEKSEAFDTIHNYLSTKSTALGNRLKANESKKSKSLVLSL 96
Query: 110 EKDEEIVDVFNGVQLKWRFSSKQVPTEMVHHPDHYNPVVKSEDRCFELSFHKKYKQVVMD 169
+ E + DVF GV++KW S ++ + + D +E R LSFH ++++++
Sbjct: 97 DDHETVEDVFQGVKVKWSSSVRENQNQSSTNRDKGF----AERRYLTLSFHSRHREMITT 152
Query: 170 SYIPHVXXXXXXXXXXXXXXXXFTLR--YDRMHGMRGDVWQSVNLDHPATFDTLAMDSDM 227
+Y+ HV +T ++ + G W +V+ DHPAT +T AMD +
Sbjct: 153 TYLDHVLREGKEIGLKKRERKLYTNNSSHEWISWRLGTNWSNVSFDHPATLETFAMDPEK 212
Query: 228 KQMIMDDLERFVKRK 242
+ + E + KR+
Sbjct: 213 NKA---EKEAWKKRR 224
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 173 (66.0 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 55/179 (30%), Positives = 92/179 (51%)
Query: 270 IAAMANYLNFDVYDLELTNLR-GNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKA 328
+ ++A L + L LT+ + L +LL +S++++ED+D + F
Sbjct: 22 VLSLAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA------FL---- 71
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRP 388
+ DL V PV + ++T SG+LN +DG+ S+ + RI+ TTNH DRLDPA +RP
Sbjct: 72 --SRDLAVENPV-KYQGLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRP 126
Query: 389 GRMDVHIHMSYCTSCGF-KMLASSYLGITEHPLFLE--VEGLIEKA-KVTPADVAEQLM 443
GR+D+ ++ YC+ +M Y G + P E E ++ +++PA V M
Sbjct: 127 GRVDLKEYVGYCSHWQLTQMFQRFYPG--QAPSLAENFAEHVLRATNQISPAQVQGYFM 183
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 191 (72.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 79/262 (30%), Positives = 126/262 (48%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A ++ KQ +M+ + +F++ E Y +G RG +L GPPGTGK+ L A A
Sbjct: 372 FKDVAGMAEAKQEVMEFV-KFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 430
Query: 278 NFDVYDL---ELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKAT 329
Y + E + G +R+L A EN SI+ V++ID + + +K AT
Sbjct: 431 GVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDA---IGKQRSKGNAT 487
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
A N + TL+ +L +DG +S D +++ TN D LD A +RPG
Sbjct: 488 GA------------NDERETTLNQLLVEMDGFDTS--DHVVVLAGTNRPDILDRALMRPG 533
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLG-IT-EHPLFLEVEGLIEKAKVTP----ADVAEQLM 443
R D H+H+ G K + +L IT + + ++ G + A +TP AD+A +
Sbjct: 534 RFDRHVHIDNPELLGRKEIFDVHLQKITLQKDIDPDLSGRL--AALTPGFSGADIAN--V 589
Query: 444 RNEVPEIALRELIQFLEIKRRE 465
NE IA R +F+ ++ E
Sbjct: 590 CNEAALIAARYNAEFVTLRHFE 611
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 64/205 (31%), Positives = 103/205 (50%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ + + KQ + + +E F+K E + N+G +G LL GPPGTGK+ L A+A
Sbjct: 298 TFEDVKGCDEAKQELKEVVE-FLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGE 356
Query: 277 LN---FDVYDLELTNL---RGNMELRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKA 328
F E + +G +R+L A + ++ ++ +++ID S+ AK
Sbjct: 357 AKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEID-SVG-------AKR 408
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRP 388
TN+ V+ P N T++ +L+ +DG + G I++ TN +D LD A LRP
Sbjct: 409 TNS----VLHPYANQ------TINQLLSEMDGFHQNAGV--IVLGATNRRDDLDQALLRP 456
Query: 389 GRMDVHIHMSYCTSCGFKMLASSYL 413
GR DV + +S G K + S YL
Sbjct: 457 GRFDVEVMVSTPDFTGRKEILSLYL 481
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 64/186 (34%), Positives = 100/186 (53%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T+D + +D +K+ I + +E VK E + ++G A +G +LYGPPGTGK+ L A+A
Sbjct: 141 STYDMVGGLDKQIKE-IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 199
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ V EL G+ +R L + A E+ SI+ +++ID SI ++
Sbjct: 200 HHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGS----SRV 254
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ ++ D V Q T+ +LN +DG SS D +II+ TN D LDPA L
Sbjct: 255 EGSSGGDSEV-----------QRTMLELLNQLDGFESS-KDIKIIM-ATNRLDILDPALL 301
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 302 RPGRID 307
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/184 (34%), Positives = 87/184 (47%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D + K+ IM+ + +F+K +FY +G RG +L GPPGTGK+ L A A N
Sbjct: 297 DVAGVD-EAKEEIMEFV-KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEAN 354
Query: 279 FDVYD------LELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAM 332
LE+ G +R+L AT K+ + ID E+ D KA+
Sbjct: 355 VPFLSVSGSEFLEMFVGVGPSRVRDLF-ATARKNAPCIIFID---EI-DAIGKARGRGGQ 409
Query: 333 DLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFT-TNHKDRLDPAFLRPGRM 391
N + TL+ +L +DG SS E I++F TN D LDPA LRPGR
Sbjct: 410 --------FGSNDERESTLNQLLVEMDGFTSS---EHIVVFAGTNRPDVLDPALLRPGRF 458
Query: 392 DVHI 395
D I
Sbjct: 459 DRQI 462
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 61/186 (32%), Positives = 97/186 (52%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T+D + +D +K+ I + +E +K E + ++G A +G LLYGPPGTGK+ L A+A
Sbjct: 129 STYDMIGGLDQQIKE-IKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G+ +R L + A E+ SI+ +++ID SI ++
Sbjct: 188 HHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGS----SRI 242
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG + + II TN D LDPA L
Sbjct: 243 DSAGSGDSEV-----------QRTMLELLNQLDGFEPTKNIK--IIMATNRLDILDPALL 289
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 290 RPGRID 295
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 165 (63.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 61/186 (32%), Positives = 96/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T+D + + +K+ I + +E VK E + ++G A +G +LYGPPGTGK+ L A+A
Sbjct: 145 STYDMVGGLTKQIKE-IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 203
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G+ +R L + A E+ SI+ +++ID SI +
Sbjct: 204 HHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGS----TRV 258
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG +S + II TN D LDPA L
Sbjct: 259 EGSGGGDSEV-----------QRTMLELLNQLDGFETSKNIK--IIMATNRLDILDPALL 305
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 306 RPGRID 311
Score = 42 (19.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 400 CTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAE 440
CT G L + +T+ L V ++ K + T VA+
Sbjct: 362 CTEAGMYALRERRIHVTQEDFELAVGKVMNKNQETAISVAK 402
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 164 (62.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 64/224 (28%), Positives = 103/224 (45%)
Query: 226 DM-KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN--YLNF-DV 281
DM KQ + + +E + E Y +G G L+YGPPGTGK+ L+ A+AN + F V
Sbjct: 144 DMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGV 203
Query: 282 YDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
E G +R++ +A EN SI+ ++++D A AT D
Sbjct: 204 VGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD-----------AIATKRFDAQT 252
Query: 337 IQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIH 396
+V ++ L +LN +DG S + +I TN D LDPA LRPGR+D I
Sbjct: 253 GAD----REVQRILLE-LLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRKIE 305
Query: 397 MSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKA-KVTPADVA 439
+++ + + + +E + + K++ AD+A
Sbjct: 306 FPLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIA 349
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 164 (62.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 64/224 (28%), Positives = 103/224 (45%)
Query: 226 DM-KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN--YLNF-DV 281
DM KQ + + +E + E Y +G G L+YGPPGTGK+ L+ A+AN + F V
Sbjct: 144 DMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGV 203
Query: 282 YDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
E G +R++ +A EN SI+ ++++D A AT D
Sbjct: 204 VGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD-----------AIATKRFDAQT 252
Query: 337 IQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIH 396
+V ++ L +LN +DG S + +I TN D LDPA LRPGR+D I
Sbjct: 253 GAD----REVQRILLE-LLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRKIE 305
Query: 397 MSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKA-KVTPADVA 439
+++ + + + +E + + K++ AD+A
Sbjct: 306 FPLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIA 349
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 164 (62.8 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 62/186 (33%), Positives = 96/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T+D + +D +K+ I + +E +K E + ++G A +G LLYGPPGTGK+ L A+A
Sbjct: 142 STYDMVGGLDKQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 200
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G+ +R L I A E+ SI+ +++ID SI R
Sbjct: 201 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEID-SIG-SSR--GE 256
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ D V Q T+ +LN +DG S+ + ++ TN D LDPA L
Sbjct: 257 SGSGGGDSEV-----------QRTMLELLNQLDGFESTKNIK--VLMCTNRIDILDPALL 303
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 304 RPGRID 309
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 164 (62.8 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 60/189 (31%), Positives = 91/189 (48%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
TFD + Q + + +E + E+Y +G +G +LYG PGTGK+ L A+AN
Sbjct: 181 TFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANS 240
Query: 276 ----YLNFDVYDL-ELTNLRGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKA 328
++ DL + + G +R + +A E SI+ +++ID A
Sbjct: 241 TSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEID-----------AVG 289
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRP 388
T D + Q Q TL +LN +DG + S GD +II+ TN D LDPA +RP
Sbjct: 290 TKRFDTS-----SRGEQEVQRTLLELLNQLDG-FESRGDVKIIM-ATNRIDSLDPALIRP 342
Query: 389 GRMDVHIHM 397
GR+D I +
Sbjct: 343 GRIDRKIEL 351
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 163 (62.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 72/246 (29%), Positives = 127/246 (51%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D ++S +++ I + +E + E Y ++G +G +LYGPPGTGK+ L A+AN +
Sbjct: 194 DIGGLESQIQE-IKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS 252
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R + +A E+ SI+ +++ID ++ + R+ +AT+
Sbjct: 253 ATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEID-AVGTK-RY---EATS 307
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
+ + Q T+ +LN +DG + S GD ++I+ TN D LDPA +RPGR
Sbjct: 308 GGEREI-----------QRTMLELLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGR 354
Query: 391 MDVHIHM-SYCTSCGFKMLASSYLGITEHP-LFLEVEGLIEKAKVTPADVAEQLMRNEVP 448
+D I + + T ++ +T P + LE E ++ K +++ AD+ + + E
Sbjct: 355 IDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLE-EFVMSKDELSGADI--KAICTEAG 411
Query: 449 EIALRE 454
+ALRE
Sbjct: 412 LLALRE 417
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 163 (62.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 72/246 (29%), Positives = 127/246 (51%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D ++S +++ I + +E + E Y ++G +G +LYGPPGTGK+ L A+AN +
Sbjct: 194 DIGGLESQIQE-IKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS 252
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R + +A E+ SI+ +++ID ++ + R+ +AT+
Sbjct: 253 ATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEID-AVGTK-RY---EATS 307
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
+ + Q T+ +LN +DG + S GD ++I+ TN D LDPA +RPGR
Sbjct: 308 GGEREI-----------QRTMLELLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGR 354
Query: 391 MDVHIHM-SYCTSCGFKMLASSYLGITEHP-LFLEVEGLIEKAKVTPADVAEQLMRNEVP 448
+D I + + T ++ +T P + LE E ++ K +++ AD+ + + E
Sbjct: 355 IDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLE-EFVMSKDELSGADI--KAICTEAG 411
Query: 449 EIALRE 454
+ALRE
Sbjct: 412 LLALRE 417
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 161 (61.7 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 61/181 (33%), Positives = 86/181 (47%)
Query: 228 KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDL 284
KQ + + +E + + + YR +G RG LLYGPPGTGK+ L+ A+AN NF V
Sbjct: 143 KQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGS 202
Query: 285 ELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNVIQP 339
E G +R++ +A EN +I+ +++ID A AT D
Sbjct: 203 EFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEID-----------AIATKRFDAQT--- 248
Query: 340 VMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM-S 398
++ Q L +L +DG G +I TN D LDPA LRPGR+D I S
Sbjct: 249 --GADREVQRILIELLTQMDGF--DQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPS 304
Query: 399 Y 399
Y
Sbjct: 305 Y 305
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 161 (61.7 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 54/196 (27%), Positives = 94/196 (47%)
Query: 202 MRGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGP 261
M D+ +S N + ++ + S+ + + + +E + Y+ VG +G LLYGP
Sbjct: 120 MISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGP 179
Query: 262 PGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQD 321
PGTGK+ L AMA+ +N + + ++ + + I E + E C I + +
Sbjct: 180 PGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNY-AKEHQPCIIFMDE 238
Query: 322 RFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRL 381
+A+ + ++ Q TL +LN +DG + G+ +II+ TN D L
Sbjct: 239 -------IDAIGGRRFSQGTSADREIQRTLMELLNHLDG-FEELGNVKIIM-ATNRPDVL 289
Query: 382 DPAFLRPGRMDVHIHM 397
DPA +RPGR+D I +
Sbjct: 290 DPALVRPGRLDRKIEI 305
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 161 (61.7 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 54/196 (27%), Positives = 94/196 (47%)
Query: 202 MRGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGP 261
M D+ +S N + ++ + S+ + + + +E + Y+ VG +G LLYGP
Sbjct: 120 MISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGP 179
Query: 262 PGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQD 321
PGTGK+ L AMA+ +N + + ++ + + I E + E C I + +
Sbjct: 180 PGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNY-AKEHQPCIIFMDE 238
Query: 322 RFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRL 381
+A+ + ++ Q TL +LN +DG + G+ +II+ TN D L
Sbjct: 239 -------IDAIGGRRFSQGTSADREIQRTLMELLNHLDG-FEELGNVKIIM-ATNRPDVL 289
Query: 382 DPAFLRPGRMDVHIHM 397
DPA +RPGR+D I +
Sbjct: 290 DPALVRPGRLDRKIEI 305
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 161 (61.7 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 59/186 (31%), Positives = 97/186 (52%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T+D + +D +K+ I + +E +K E + ++G A +G LLYGPPGTGK+ L A+A
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G+ +R L + A E+ SI+ +++ID SI A
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SI------GSA 269
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + N + Q T+ +LN +DG +S ++ ++ TN D LD A L
Sbjct: 270 RMESGSG--------NGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALL 319
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 320 RPGRID 325
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 161 (61.7 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 59/186 (31%), Positives = 97/186 (52%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T+D + +D +K+ I + +E +K E + ++G A +G LLYGPPGTGK+ L A+A
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G+ +R L + A E+ SI+ +++ID SI A
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SI------GSA 269
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + N + Q T+ +LN +DG +S ++ ++ TN D LD A L
Sbjct: 270 RMESGSG--------NGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALL 319
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 320 RPGRID 325
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 161 (61.7 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 57/176 (32%), Positives = 88/176 (50%)
Query: 226 DM-KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLNF 279
DM KQ I + +E + + Y+ +G RG LLYGPPGTGK+ L+ A+AN ++
Sbjct: 172 DMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRV 231
Query: 280 DVYDLELTNL-RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
+ + L G +R++ +A EN +I+ +++ID A AT D
Sbjct: 232 NGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEID-----------AIATKRFDAQT 280
Query: 337 IQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+V ++ L +LN +DG + + +I TN D LDPA LRPGR+D
Sbjct: 281 GAD----REVQRILLE-LLNQMDGFEQTSNVK--VIMATNRADTLDPALLRPGRLD 329
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 56/173 (32%), Positives = 82/173 (47%)
Query: 228 KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYDL 284
KQ I + +E + E Y+ +G RG LLYGPPGTGK+ L A+AN+ V
Sbjct: 164 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGS 223
Query: 285 ELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNVIQP 339
E G +R++ +A EN +I+ ++++D A+ A D V +
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIAT-----ARFDAQTGADREVQRI 278
Query: 340 VMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+M L LN +DG + + +I TN D LDPA LRPGR+D
Sbjct: 279 LMEL-----------LNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLD 318
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 57/176 (32%), Positives = 89/176 (50%)
Query: 226 DM-KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLNF 279
DM KQ I + +E + + + Y +G RG LLYGPPGTGK+ L+ A+AN ++
Sbjct: 161 DMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRI 220
Query: 280 DVYDLELTNL-RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
+ + L G +R++ +A EN +I+ +++ID A AT D
Sbjct: 221 NGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEID-----------AIATKRFDAQT 269
Query: 337 IQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+V ++ L +LN +DG + ++I+ TN D LDPA LRPGR+D
Sbjct: 270 GAD----REVQRILLE-LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 57/176 (32%), Positives = 89/176 (50%)
Query: 226 DM-KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN-----YLNF 279
DM KQ I + +E + + + Y +G RG LLYGPPGTGK+ L+ A+AN ++
Sbjct: 161 DMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRI 220
Query: 280 DVYDLELTNL-RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
+ + L G +R++ +A EN +I+ +++ID A AT D
Sbjct: 221 NGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEID-----------AIATKRFDAQT 269
Query: 337 IQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+V ++ L +LN +DG + ++I+ TN D LDPA LRPGR+D
Sbjct: 270 GAD----REVQRILLE-LLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 133 (51.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 216 ATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
A++D + +D MKQ ++DD F K + Y + WKRG + YGPPG GK+ I A N
Sbjct: 190 ASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPPGNGKTVSIKATMN 249
Query: 276 YL 277
L
Sbjct: 250 ML 251
Score = 72 (30.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 352 SGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL-RPGRMD 392
S LN +DGL ++ D +I +TNH +RLDP RP R D
Sbjct: 306 SYFLNEVDGLKNN--DGIFMIGSTNHLERLDPGISKRPSRFD 345
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 26/70 (37%), Positives = 43/70 (61%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
+++ + + I+ D++ F+ ++Y + G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 69 NSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 128
Query: 279 FDVYDLELTN 288
+ L LT+
Sbjct: 129 HSICLLSLTD 138
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 61/176 (34%), Positives = 86/176 (48%)
Query: 226 DM-KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDV 281
DM KQ I + +E + + + Y +G RG LLYGPPGTGK+ L+ A+AN V
Sbjct: 178 DMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRV 237
Query: 282 YDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
E + G +R++ +A EN SI+ ++++D SI + RF A D V
Sbjct: 238 NGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVD-SIATK-RF---DAQTGSDREV 292
Query: 337 IQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
Q L +L +DG S + +I TN D LDPA LRPGR+D
Sbjct: 293 -----------QRILIELLTQMDGFDQSTNVK--VIMATNRADTLDPALLRPGRLD 335
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 113 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 171
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 172 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 220
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 221 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 273
Query: 391 MD 392
+D
Sbjct: 274 ID 275
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 185 DIGGLDTQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 243
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 244 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AVGTK 292
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 293 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 345
Query: 391 MD 392
+D
Sbjct: 346 ID 347
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 161 (61.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 75/259 (28%), Positives = 120/259 (46%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D MD + K IM+ + F+K E ++ +G RG +L GPPGTGK+ L A A
Sbjct: 403 DVAGMD-EAKVEIMEFVS-FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESG 460
Query: 279 ---FDVYDLELTNLR---GNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAM 332
F V E + G +R+L A K+ C I + + A K+ +A
Sbjct: 461 VPFFSVSGSEFVEMFVGVGPSRVRDLF-ANARKNT------PCIIFIDEIDAIGKSRSAK 513
Query: 333 DLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+ + N + TL+ +L +DG +S D+ +++ TN D LD A +RPGR D
Sbjct: 514 NFS------GGNDERESTLNQILTEMDGFNTS--DQVVVLAGTNRPDVLDKALMRPGRFD 565
Query: 393 VHIHMSYCTSCGFKMLASSYLG--ITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
HI + T G K + +L +T+ + + G + + +TP AD+A + NE
Sbjct: 566 RHISIDRPTMDGRKQIFRVHLKKIVTKEDMDY-LTGRL--SALTPGFAGADIANCV--NE 620
Query: 447 VPEIALRELIQFLEIKRRE 465
+A RE + + +K E
Sbjct: 621 AALVAARENAESVTMKHFE 639
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 184 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 242
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 243 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 291
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 292 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 344
Query: 391 MD 392
+D
Sbjct: 345 ID 346
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 185 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 243
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 244 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 292
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 293 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 345
Query: 391 MD 392
+D
Sbjct: 346 ID 347
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATEN-KSILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEID-----------AIGTK 293
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 294 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 346
Query: 391 MD 392
+D
Sbjct: 347 ID 348
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 293
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 294 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 346
Query: 391 MD 392
+D
Sbjct: 347 ID 348
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 293
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 294 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 346
Query: 391 MD 392
+D
Sbjct: 347 ID 348
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 293
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 294 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 346
Query: 391 MD 392
+D
Sbjct: 347 ID 348
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 293
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 294 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 346
Query: 391 MD 392
+D
Sbjct: 347 ID 348
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 293
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 294 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 346
Query: 391 MD 392
+D
Sbjct: 347 ID 348
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYGPPGTGK+ L A+AN +
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 293
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 294 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 346
Query: 391 MD 392
+D
Sbjct: 347 ID 348
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 157 (60.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 60/186 (32%), Positives = 97/186 (52%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 145 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ V EL G+ +R L + A E+ SI+ +++ID SI ++
Sbjct: 204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGS----SRI 258
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
++ + D V Q T+ +LN +DG ++ + +I TN D LDPA L
Sbjct: 259 ESGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALL 305
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 306 RPGRID 311
Score = 39 (18.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 347 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 392
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 152 (58.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 59/186 (31%), Positives = 97/186 (52%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ + + +E VK E + ++G + +G LLYGPPGTGK+ L A+A
Sbjct: 176 STYEMVGGLDQQVKE-VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G+ +R L + A E+ SI+ +++ID SI Q +
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSQ----RI 289
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG S+ + +I TN D LD A L
Sbjct: 290 EGEHG-DSEV-----------QRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALL 335
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 336 RPGRID 341
Score = 45 (20.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 64 NEYDDGLNQNVLFKAAKLYLEPRIPPYVKRIKINLPNKE 102
N+ LN+ + K Y E +I Y I L NK+
Sbjct: 35 NKNSSALNEEQVQSGIKRYYELKIEEYESIINKKLQNKK 73
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 152 (58.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 59/186 (31%), Positives = 97/186 (52%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ + + +E VK E + ++G + +G LLYGPPGTGK+ L A+A
Sbjct: 176 STYEMVGGLDQQVKE-VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G+ +R L + A E+ SI+ +++ID SI Q +
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGSQ----RI 289
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG S+ + +I TN D LD A L
Sbjct: 290 EGEHG-DSEV-----------QRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALL 335
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 336 RPGRID 341
Score = 45 (20.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 64 NEYDDGLNQNVLFKAAKLYLEPRIPPYVKRIKINLPNKE 102
N+ LN+ + K Y E +I Y I L NK+
Sbjct: 35 NKNSSALNEEQVQSGIKRYYELKIEEYESIINKKLQNKK 73
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 158 (60.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 78/268 (29%), Positives = 119/268 (44%)
Query: 213 DHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAA 272
D +F +A + KQ IM+ + F+K Y +G RG +L GPPGTGK+ L A
Sbjct: 282 DIKISFKNVAGCDEAKQEIMEFVH-FLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKA 340
Query: 273 MANYLN---FDVYDLELTNLR---GNMELRNLLIATENK--SILVVEDIDCSIELQDRFA 324
A N V E + G +R+L + SI+ +++ID +I ++R
Sbjct: 341 TAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEID-AIG-KER-G 397
Query: 325 KAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPA 384
K A N + TL+ +L +DG +S D+ +++ TN D LD A
Sbjct: 398 KGGALGGA-----------NDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNA 444
Query: 385 FLRPGRMDVHIHMSYCTSCGFKMLASSYLG-ITEHPLFLE-VEGLIEK-AKVTP----AD 437
+RPGR D HI + G + + +L + PL + + L K A +TP AD
Sbjct: 445 LMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGAD 504
Query: 438 VAEQLMRNEVPEIALRELIQFLEIKRRE 465
+A NE IA R ++ I E
Sbjct: 505 IANAC--NEAALIAARHNDPYITIHHFE 530
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 154 (59.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 76/244 (31%), Positives = 109/244 (44%)
Query: 228 KQM--IMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVY 282
KQM I + +E +K E + VG +G LLYGPPGTGK+ L A+A N V
Sbjct: 177 KQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVV 236
Query: 283 DLELTNL---RGNMELRNLLIATENK--SILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
EL G ++++ + K SI+ +++ID AK T+A+
Sbjct: 237 GSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDA--------IAAKRTDALTGG-- 286
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
++ Q TL +L +DG + + GD +II TN D LDPA LRPGR D I +
Sbjct: 287 ------DREVQRTLMQLLAEMDG-FDARGDVKII-GATNRPDILDPAILRPGRFDRIIEV 338
Query: 398 SYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMR--NEVPEIALREL 455
G + + T E L E AK+T V +L E A+REL
Sbjct: 339 PAPDEKGRLEILKIH---TRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIREL 395
Query: 456 IQFL 459
++
Sbjct: 396 RDYV 399
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 158 (60.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 67/251 (26%), Positives = 111/251 (44%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+D + S + I + +E +K+ E +++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANE 410
Query: 277 LNFDVYDLE----LTNLRGNME--LRNLLI-AT-ENKSILVVEDIDCSIELQDRFAKAKA 328
+ V + ++ G E LR + AT + SI+ ++++D K
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--------KR 462
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIF-TTNHKDRLDPAFLR 387
A N+V + ++ +L +DG+ S + ++++ TN LD A R
Sbjct: 463 EGAQ-----------NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRR 511
Query: 388 PGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQL--MRN 445
PGR D I + + + L H L EVE L++ A V L + N
Sbjct: 512 PGRFDKEIEIGVPNAADRLDILQKLLQRVPH-LLTEVE-LLQLANSAHGYVGADLKALCN 569
Query: 446 EVPEIALRELI 456
E ALR ++
Sbjct: 570 EAGLYALRRVL 580
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 58/209 (27%), Positives = 97/209 (46%)
Query: 199 MHGMRGDVWQSVNLDHP-ATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYL 257
M+ +R + V +D P ++ + ++K + +E +K E + +G +G L
Sbjct: 606 MNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVL 665
Query: 258 LYGPPGTGKSSLIAAMANY--LNF-DVYDLELTNLR-GNME--LRNLLIATE--NKSILV 309
LYGPPG K+ + A+AN LNF + EL N G E +R + + SI+
Sbjct: 666 LYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIF 725
Query: 310 VEDIDC-SIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDE 368
+++D +IE R + + A N D L+ +L +DG+ D
Sbjct: 726 FDELDALAIE---RGSSSGAGNVADR---------------VLAQLLTEMDGI-EQLKDV 766
Query: 369 RIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
I+ TN DR+D A +RPGR+D I++
Sbjct: 767 TILA-ATNRPDRIDKALMRPGRIDRIIYV 794
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 153 (58.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 55/173 (31%), Positives = 83/173 (47%)
Query: 228 KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVYDL 284
KQ + + +E + Y+ +G RG LLYGPPGTGK+ L A+A++ + V
Sbjct: 159 KQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGS 218
Query: 285 ELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNVIQP 339
E G +R++ +A EN +I+ +++ID A AT D
Sbjct: 219 EFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEID-----------AIATKRFDAQT--- 264
Query: 340 VMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
++ Q L +LN +DG S + +I TN +D LDPA LRPGR+D
Sbjct: 265 --GADREVQRILMELLNQMDGFDVSVNVK--VIMATNRQDTLDPALLRPGRLD 313
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 158 (60.7 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 57/185 (30%), Positives = 89/185 (48%)
Query: 226 DMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
D+K I+D ++ + K+ + + G + G LLYGPPGTGK+ L A+A + L
Sbjct: 665 DVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECS-----LN 718
Query: 286 LTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQ 345
+++G EL N+ I K+ V DI E + R A+ +L+ + P +
Sbjct: 719 FLSVKGP-ELINMYIGESEKN---VRDI---FE-KARSARPCVIFFDELDSLAPARGASG 770
Query: 346 ----VPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCT 401
V +S ML IDGL S + II +N D +DPA LRPGR D +++
Sbjct: 771 DSGGVMDRVVSQMLAEIDGL-SDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNA 829
Query: 402 SCGFK 406
++
Sbjct: 830 DASYR 834
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 157 (60.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 67/253 (26%), Positives = 116/253 (45%)
Query: 217 TFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
T+D + ++S +K+ I + +E +K+ E +++ G + RG LLYGPPGTGK+ + A+AN
Sbjct: 345 TYDMIGGLNSQLKE-IREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 276 YLNFDVYDLE----LTNLRGNME--LRNLLI-AT-ENKSILVVEDIDCSIELQDRFAKAK 327
+ V + ++ G E LR + AT + SI+ ++++D K
Sbjct: 404 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--------K 455
Query: 328 ATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIF-TTNHKDRLDPAFL 386
A N+V + ++ +L +DG+ S + ++++ TN LD A
Sbjct: 456 REGAQ-----------NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALR 504
Query: 387 RPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQL--MR 444
RPGR D I + + + L H L E E L++ A V L +
Sbjct: 505 RPGRFDKEIEIGVPNAQDRLDILQKLLRRVPH-LLTEAE-LLQLANSAHGYVGADLKALC 562
Query: 445 NEVPEIALRELIQ 457
NE ALR +++
Sbjct: 563 NEAGLYALRRVLR 575
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 156 (60.0 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 59/183 (32%), Positives = 85/183 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TFD +A + KQ M+ +E F+K+ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 218 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 277 LN---FDVYDLELTNLR---GNMELRNLLI-ATENKSILVVEDIDCSIELQDRFAKAKAT 329
F + E + G +R+L A EN +V D E+ D + + T
Sbjct: 277 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD-----EI-DAVGRQRGT 330
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N + TL+ +L +DG + G I++ TN D LD A LRPG
Sbjct: 331 G---------IGGGNDEREQTLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPG 379
Query: 390 RMD 392
R D
Sbjct: 380 RFD 382
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 156 (60.0 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 59/183 (32%), Positives = 85/183 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TFD +A + KQ M+ +E F+K+ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 225 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 277 LN---FDVYDLELTNLR---GNMELRNLLI-ATENKSILVVEDIDCSIELQDRFAKAKAT 329
F + E + G +R+L A EN +V D E+ D + + T
Sbjct: 284 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD-----EI-DAVGRQRGT 337
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N + TL+ +L +DG + G I++ TN D LD A LRPG
Sbjct: 338 G---------IGGGNDEREQTLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPG 386
Query: 390 RMD 392
R D
Sbjct: 387 RFD 389
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 157 (60.3 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 69/250 (27%), Positives = 111/250 (44%)
Query: 215 PATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
P F+ +A + K +++ ++ F+K +E Y +G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 275 NYLNFD-VYD-----LELTNLRGNMELRNLLIATEN--KSILVVEDIDCSIELQDRFAKA 326
N +Y +E+ +G +R L + SI+ +++ID + + +
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSSG 260
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
A Q LNQ+ V + G N + ++I TN D LD A L
Sbjct: 261 SVNGAGQREHDQ---TLNQL-LVEMDGFSNTV---------HIMVIGATNRIDTLDSALL 307
Query: 387 RPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTPADVAEQLMR- 444
RPGR D +++ G K + Y+ + L LE IEK A++TP L
Sbjct: 308 RPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLED---IEKIARLTPGFSGADLENV 364
Query: 445 -NEVPEIALR 453
NE +A R
Sbjct: 365 VNEATILATR 374
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 157 (60.3 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 69/250 (27%), Positives = 111/250 (44%)
Query: 215 PATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
P F+ +A + K +++ ++ F+K +E Y +G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 275 NYLNFD-VYD-----LELTNLRGNMELRNLLIATEN--KSILVVEDIDCSIELQDRFAKA 326
N +Y +E+ +G +R L + SI+ +++ID + + +
Sbjct: 204 TEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDA---IGGKRSSG 260
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
A Q LNQ+ V + G N + ++I TN D LD A L
Sbjct: 261 SVNGAGQREHDQ---TLNQL-LVEMDGFSNTV---------HIMVIGATNRIDTLDSALL 307
Query: 387 RPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTPADVAEQLMR- 444
RPGR D +++ G K + Y+ + L LE IEK A++TP L
Sbjct: 308 RPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLED---IEKIARLTPGFSGADLENV 364
Query: 445 -NEVPEIALR 453
NE +A R
Sbjct: 365 VNEATILATR 374
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 152 (58.6 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 59/186 (31%), Positives = 96/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + ++ +K+ I + +E VK E + ++G +G LLYGPPGTGK+ L A+A
Sbjct: 142 STYEMVGGLEKQIKE-IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G+ +R L + A E+ SI+ +++ID SI R +
Sbjct: 201 HHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID-SIG-SSRSDSS 258
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ D V Q T+ +LN +DG ++ + +I TN D LDPA L
Sbjct: 259 GGSG--DSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALL 303
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 304 RPGRID 309
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 58/176 (32%), Positives = 85/176 (48%)
Query: 226 DM-KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA--NYLNF-DV 281
DM KQ + + +E + E Y+ +G RG L+YGPPG GK+ L A+A +F V
Sbjct: 167 DMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRV 226
Query: 282 YDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
E G +R++ +A EN SI+ +++ID A AT D
Sbjct: 227 VGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEID-----------AIATKRFDAQT 275
Query: 337 IQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+V ++ L +LN +DG S + +I TN +D LDPA LRPGR+D
Sbjct: 276 GAD----REVQRILLE-LLNQMDGFDQSTNVK--VIMATNRQDTLDPALLRPGRLD 324
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 158 (60.7 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 56/176 (31%), Positives = 84/176 (47%)
Query: 227 MKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLEL 286
+K I+D ++ +K E + N G + G L YGPPGTGK+ L A+A NF L
Sbjct: 823 VKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIAT--NFS---LNF 876
Query: 287 TNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQ- 345
+++G EL N+ I ++ V + R AK +L+ + P NQ
Sbjct: 877 FSVKGP-ELLNMYIGESEANVRRVFQ-------RARDAKPCVIFFDELDSVAPKRG-NQG 927
Query: 346 ----VPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
V +S +L +DG+ S GD ++ TN D LD A LRPGR D +++
Sbjct: 928 DSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 983
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 158 (60.7 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 56/176 (31%), Positives = 84/176 (47%)
Query: 227 MKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLEL 286
+K I+D ++ +K E + N G + G L YGPPGTGK+ L A+A NF L
Sbjct: 823 VKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIAT--NFS---LNF 876
Query: 287 TNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQ- 345
+++G EL N+ I ++ V + R AK +L+ + P NQ
Sbjct: 877 FSVKGP-ELLNMYIGESEANVRRVFQ-------RARDAKPCVIFFDELDSVAPKRG-NQG 927
Query: 346 ----VPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
V +S +L +DG+ S GD ++ TN D LD A LRPGR D +++
Sbjct: 928 DSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYL 983
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 156 (60.0 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 77/251 (30%), Positives = 112/251 (44%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K+ IM+ + F+K Y +G RG +L GPPGTGK+ L A A
Sbjct: 347 FKDVAGCDEAKEEIMEFVS-FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEA 405
Query: 278 NFDVYDL---ELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKAT 329
Y + E + G +R+L A EN SI+ +++ID KA+
Sbjct: 406 GVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDA-------IGKARQK 458
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
N + TL+ ML +DG + D +++ TN D LD A LRPG
Sbjct: 459 GNFS--------GANDERENTLNQMLVEMDGFTPA--DHVVVLAGTNRPDILDKALLRPG 508
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFL--EVEGLIEK-AKVTP----ADVAEQL 442
R D HI++ G K + + +L H L L E+ L + A +TP AD+A
Sbjct: 509 RFDRHINIDKPELEGRKAIFAVHL----HHLKLAGEIFDLKNRLAALTPGFSGADIAN-- 562
Query: 443 MRNEVPEIALR 453
+ NE IA R
Sbjct: 563 VCNEAALIAAR 573
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 156 (60.0 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 66/252 (26%), Positives = 111/252 (44%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+D + S + I + +E +K+ E +++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 410
Query: 277 LNFDVYDLE----LTNLRGNME--LRNLLI-AT-ENKSILVVEDIDCSIELQDRFAKAKA 328
+ V + ++ G E LR + AT + SI+ ++++D K
Sbjct: 411 VGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCP--------KR 462
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIF-TTNHKDRLDPAFLR 387
A N+V + ++ +L +DG+ S + ++++ TN LD A R
Sbjct: 463 EGAQ-----------NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRR 511
Query: 388 PGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQL--MRN 445
PGR D I + + + L H L E E L++ A V L + N
Sbjct: 512 PGRFDKEIEIGVPNAQDRLDILQKLLRRVPH-LLTEAE-LLQLANSAHGYVGADLKVLCN 569
Query: 446 EVPEIALRELIQ 457
E ALR +++
Sbjct: 570 EAGLCALRRILK 581
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 57/203 (28%), Positives = 91/203 (44%)
Query: 199 MHGMRGDVWQSVNLDHP-ATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYL 257
M+ +R + + +D P ++ + +K + +E +K E + +G +G L
Sbjct: 606 MNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVL 665
Query: 258 LYGPPGTGKSSLIAAMANY--LNF-DVYDLELTNLRGNMELRNLLIATENKSILVVEDID 314
LYGPPG K+ + A+AN LNF + EL N E + T K+ V I
Sbjct: 666 LYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVG-ESERAVRETFRKARAVAPSII 724
Query: 315 CSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFT 374
EL D A + ++ NV V L+ +L +DG+ D I+
Sbjct: 725 FFDEL-DALAVERGSSLGAGNVADRV----------LAQLLTEMDGI-EQLKDVTILA-A 771
Query: 375 TNHKDRLDPAFLRPGRMDVHIHM 397
TN DR+D A +RPGR+D I++
Sbjct: 772 TNRPDRIDKALMRPGRIDRIIYV 794
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 55/196 (28%), Positives = 90/196 (45%)
Query: 213 DH-P-ATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLI 270
DH P T+D + S + I + +E +KR E +++ G + RG LLYGPPGTGK+ +
Sbjct: 310 DHGPQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIA 369
Query: 271 AAMANYLNFDVYDLE----LTNLRGNMELRNLLIATE----NKSILVVEDIDCSIELQDR 322
A+AN + V + ++ G E R I E SI+ ++++D
Sbjct: 370 KAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCP---- 425
Query: 323 FAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIF-TTNHKDRL 381
K A N+V + ++ +L +DG+ S + ++++ TN L
Sbjct: 426 ----KREGAQ-----------NEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHAL 470
Query: 382 DPAFLRPGRMDVHIHM 397
D A RPGR D I +
Sbjct: 471 DAALRRPGRFDKEIEI 486
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 50/181 (27%), Positives = 82/181 (45%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+D + S + I + +E +KR E +++ G + RG LLYGPPGTGK+ + A+AN
Sbjct: 316 TYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANE 375
Query: 277 LNFDVYDLE----LTNLRGNMELRNLLIATE----NKSILVVEDID--CSIELQDRFAKA 326
+ V + ++ G E R I E SI+ ++++D C +
Sbjct: 376 VGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREGAQNEVE 435
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLN---FIDGLWSSCG--DERIIIFTTNHKDRL 381
K A L ++ + + Q+ + G N +D G D+ I I N +DRL
Sbjct: 436 KRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIPNAQDRL 495
Query: 382 D 382
D
Sbjct: 496 D 496
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 58/182 (31%), Positives = 90/182 (49%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +DS +++ I + +E + E+Y +G +G +LYG PGTGK+ L A+AN +
Sbjct: 186 DIGGLDSQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 244
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 293
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 294 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 346
Query: 391 MD 392
+D
Sbjct: 347 ID 348
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 71/234 (30%), Positives = 107/234 (45%)
Query: 229 QMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTN 288
Q I + +E + E Y ++G +G +LYG PGTGK+ L A+AN T
Sbjct: 198 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN-------STSATF 250
Query: 289 LRG-NMELRNLLIATENKSIL----VVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNL 343
LR EL + K + V +D+ SI D A T D N
Sbjct: 251 LRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEI-DAVGTKRYDAN-----SGG 304
Query: 344 NQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM---SYC 400
+ Q T+ +LN +DG + S GD ++I+ TN + LDPA LRPGR+D I
Sbjct: 305 EREIQRTMLELLNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKIEFPLPDIK 362
Query: 401 TSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRNEVPEIALRE 454
T + +S + + E + LE E ++ K + + AD+ + + E +ALRE
Sbjct: 363 TRRRIFQIHTSKMTLAED-VNLE-EFVMTKDEFSGADI--KAICTEAGLLALRE 412
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/178 (30%), Positives = 84/178 (47%)
Query: 228 KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFD---VYDL 284
KQ I + +E + + Y+ +G RG LL+GPPG GK+ L A+A++ V
Sbjct: 161 KQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGS 220
Query: 285 ELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNVIQP 339
E G +R+L +A +N SI+ +++ID A AT D
Sbjct: 221 EFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEID-----------AIATKRFDAQTGAD 269
Query: 340 VMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+V ++ L +LN +DG + + +I TN D LDPA LRPGR+D I +
Sbjct: 270 ----REVQRILLE-LLNQMDGFDETTNIK--VIMATNRADTLDPALLRPGRLDRKIEL 320
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 153 (58.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 59/186 (31%), Positives = 96/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LL+GPPGTGK+ L A+A
Sbjct: 156 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVA 214
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 215 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRV 269
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ ++ D V Q T+ +LN +DG ++ + +I TN D LDPA L
Sbjct: 270 EGSSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALL 316
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 317 RPGRID 322
Score = 38 (18.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 388 PGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
PG + S CT G L + +T+ + V +++K
Sbjct: 362 PGASGAEVK-SVCTEAGMFALRERRIHVTQEDFEMAVGKVMQK 403
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 71/247 (28%), Positives = 117/247 (47%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D +++ I + +E + E+Y +G +G +LYG PGTGK+ L A+AN +
Sbjct: 189 DVGGLDQQIQE-IKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTS 247
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
+ EL G +R L +A EN SI+ +++ID A T
Sbjct: 248 ATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEID-----------AVGTK 296
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++++ TN + LDPA +RPGR
Sbjct: 297 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVLM-ATNRIESLDPALIRPGR 349
Query: 391 MDVHIHMSYC---TSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRNEV 447
+D I T + +S + + + + LE E + K +++ AD+ + M E
Sbjct: 350 IDRKIEFPLPDEKTKRRIFQIHTSRMTLGKE-VNLE-EFITAKDELSGADI--KAMCTEA 405
Query: 448 PEIALRE 454
+ALRE
Sbjct: 406 GLLALRE 412
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 67/253 (26%), Positives = 115/253 (45%)
Query: 217 TFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
T+D + ++S +K+ I + +E +K+ E +++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 342 TYDMIGGLNSQLKE-IREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 276 YLNFDVYDLE----LTNLRGNME--LRNLLI-AT-ENKSILVVEDIDCSIELQDRFAKAK 327
+ V + ++ G E LR + AT + SI+ ++++D K
Sbjct: 401 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--------K 452
Query: 328 ATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIF-TTNHKDRLDPAFL 386
A N+V + ++ +L +DG+ S + ++++ TN LD A
Sbjct: 453 REGAQ-----------NEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALR 501
Query: 387 RPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQL--MR 444
RPGR D I + + + L H L E E L++ A V L +
Sbjct: 502 RPGRFDKEIEIGVPNAQDRLDILQKLLRRVPH-LLTEAE-LLQLANSAHGYVGADLKALC 559
Query: 445 NEVPEIALRELIQ 457
NE ALR +++
Sbjct: 560 NEAGLHALRRVLR 572
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 56/176 (31%), Positives = 84/176 (47%)
Query: 226 DM-KQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFD---V 281
DM KQ I + +E + E Y+ +G RG L+YGPPG GK+ L A+A++ V
Sbjct: 166 DMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRV 225
Query: 282 YDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
E G +R++ +A EN +I+ +++ID A AT D
Sbjct: 226 VGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-----------AIATKRFDAQT 274
Query: 337 IQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+V ++ L +LN +DG + + +I TN D LDPA LRPGR+D
Sbjct: 275 GAD----REVQRILLE-LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLD 323
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 76/261 (29%), Positives = 120/261 (45%)
Query: 208 QSVNLDHPATF-DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGK 266
++V TF D MD + K+ IM+ + F+K Y+ +G +G +L GPPGTGK
Sbjct: 343 KAVKATSTTTFKDVAGMD-EAKEEIMEFVS-FLKDPSRYKKLGARIPKGAILSGPPGTGK 400
Query: 267 SSLIAAMANYLNFDVYDLELTNLR------GNMELRNLLI-ATENKSILVVEDIDCSIEL 319
+ L A A + Y + ++ G +R+L A N +V D E+
Sbjct: 401 TLLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFID-----EI 455
Query: 320 QDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFT-TNHK 378
D +A++ N + TL+ +L +DG S+ G +++F TN
Sbjct: 456 -DAVGRARSRGGFH----------NDERENTLNQLLVEMDGFSSTSG---VVVFAGTNRS 501
Query: 379 DRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP-- 435
D LDPA LRPGR D I++ G K + +L + L E+E + +K A +TP
Sbjct: 502 DVLDPALLRPGRFDRQIYVGKPDIKGRKDIFMVHLKNIK--LDGEMEEIAKKLATLTPGF 559
Query: 436 --ADVAEQLMRNEVPEIALRE 454
AD+A + NE +A R+
Sbjct: 560 SGADIAN--VCNEGALVAARK 578
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 74/248 (29%), Positives = 118/248 (47%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D ++S +++ I + +E + E Y +G +G +LYG PGTGK+ L A+AN +
Sbjct: 183 DIGGLESQIQE-IKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 241
Query: 279 ---FDVYDLELTN--LRGNMEL-RNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
+ EL L L R + +A EN SI+ +++ID A T
Sbjct: 242 ATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEID-----------AIGTK 290
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + GD ++I+ TN + LDPA +RPGR
Sbjct: 291 RYDSN-----SGGEREIQRTMLELLNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGR 343
Query: 391 MDVHIHMSYCT-SCGFKMLA--SSYLGITEHPLFLEVEGLIE-KAKVTPADVAEQLMRNE 446
+D I S K+L +S + ++E + +E L+ K ++ AD+ Q M E
Sbjct: 344 IDRKILFENPDLSTKKKILGIHTSKMNLSED---VNLETLVTTKDDLSGADI--QAMCTE 398
Query: 447 VPEIALRE 454
+ALRE
Sbjct: 399 AGLLALRE 406
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 73/231 (31%), Positives = 111/231 (48%)
Query: 235 LERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDLELTNLR- 290
+E +K E + VG +G LLYGPPGTGK+ L A+A L NF V + +
Sbjct: 148 IELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYI 207
Query: 291 GNME--LRNLL-IATENKS-ILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQV 346
G +R + A E++ ++ +++ID +I + RF++ T+A D +
Sbjct: 208 GESARIIREMFGYAKEHEPCVIFMDEID-AIGGR-RFSEG--TSA-DREI---------- 252
Query: 347 PQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCGFK 406
Q TL +LN +DG + G +II+ TN D LDPA LRPGR+D I + G
Sbjct: 253 -QRTLMELLNQMDG-FDYLGQTKIIM-ATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRM 309
Query: 407 MLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRNEVPE---IALRE 454
+ +L ++ E L+ K+T L RN V E IA++E
Sbjct: 310 EILKIHLEKVSKQGEIDYEALV---KLTDGTNGADL-RNVVTEAGFIAIKE 356
>UNIPROTKB|P63345 [details] [associations]
symbol:mpa "Proteasome-associated ATPase" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0010498 "proteasomal protein catabolic process"
evidence=IDA;IMP] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019941 "modification-dependent protein
catabolic process" evidence=IDA;IMP] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0032182 "small conjugating protein binding" evidence=IDA;IPI]
[GO:0043335 "protein unfolding" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0051409 "response to
nitrosative stress" evidence=IMP] [GO:0070628 "proteasome binding"
evidence=IPI] [GO:0071732 "cellular response to nitric oxide"
evidence=IMP] HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0009405 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0051260 EMBL:BX842578 GO:GO:0016887
GO:GO:0071732 GO:GO:0051409 eggNOG:COG0464 EMBL:DQ888314 PIR:F70512
RefSeq:NP_216631.1 RefSeq:NP_336644.1 RefSeq:YP_006515531.1
PDB:3FP9 PDB:3M91 PDB:3M9B PDB:3M9D PDB:3M9H PDBsum:3FP9
PDBsum:3M91 PDBsum:3M9B PDBsum:3M9D PDBsum:3M9H
ProteinModelPortal:P63345 SMR:P63345 DIP:DIP-48292N
MINT:MINT-7262409 PRIDE:P63345 EnsemblBacteria:EBMYCT00000003259
EnsemblBacteria:EBMYCT00000070852 GeneID:13316922 GeneID:887297
GeneID:923659 KEGG:mtc:MT2175 KEGG:mtu:Rv2115c KEGG:mtv:RVBD_2115c
PATRIC:18126540 TubercuList:Rv2115c HOGENOM:HOG000245286 KO:K13527
OMA:VFFDEME ProtClustDB:CLSK872012 UniPathway:UPA00997
EvolutionaryTrace:P63345 GO:GO:0022623 GO:GO:0032182 GO:GO:0019941
GO:GO:0010499 GO:GO:0043335 PANTHER:PTHR23073:SF4
TIGRFAMs:TIGR03689 Uniprot:P63345
Length = 609
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 57/200 (28%), Positives = 94/200 (47%)
Query: 229 QMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTN 288
+ I D +E KE YR +G LLYGPPG GK+ + A+AN L ++
Sbjct: 262 EQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLA-----KKMAE 316
Query: 289 LRGN--MELRNLLIATENKSIL--VVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNL- 343
+RG+ E ++ + + +L V + + I L + A+ KA+ + V M+
Sbjct: 317 VRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSI 376
Query: 344 ---------NQVPQVTLSGMLNFIDGLWSSCGDERIIIF-TTNHKDRLDPAFLRPGRMDV 393
+ V + +L+ IDG+ G E +I+ +N +D +DPA LRPGR+DV
Sbjct: 377 FRTRGTGVSSDVETTVVPQLLSEIDGVE---GLENVIVIGASNREDMIDPAILRPGRLDV 433
Query: 394 HIHMSYCTSCGFKMLASSYL 413
I + + + + S YL
Sbjct: 434 KIKIERPDAEAAQDIYSKYL 453
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 61/185 (32%), Positives = 90/185 (48%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
TFD +A + K + + ++ K+F R GK K G LL GPPGTGK+ L A+A
Sbjct: 173 TFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPK-GVLLVGPPGTGKTLLARAVAGE 231
Query: 276 ----YLNFDVYD-LELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
+L+ +E+ G +R+L AT KS + ID EL D +++
Sbjct: 232 ADVTFLSISASQFIEMFVGVGAGRVRDLF-ATAKKSAPSIIFID---EL-DAVGRSRGAG 286
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
+ + + TL+ +L+ +DG S DE I++ TN D LDPA LRPGR
Sbjct: 287 ---------LGGGHDEREQTLNQLLSEMDGFDSH--DEVIVMAATNRPDVLDPALLRPGR 335
Query: 391 MDVHI 395
D H+
Sbjct: 336 FDRHV 340
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 57/209 (27%), Positives = 98/209 (46%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
SD + + + +E + E + VG +G LLYGPPGTGK+ L A+A+ N D L
Sbjct: 146 SDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS--NIDANFL 203
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + Q +A+ + +
Sbjct: 204 KIVS----SAIIDKYIGESAR--LIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 257
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTS-C 403
+ Q TL +LN +DG + G ++I+ TN D LDPA LRPGR+D I +
Sbjct: 258 REIQRTLMELLNQLDG-FDELGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQA 315
Query: 404 GFKMLASSYLGITEHPLFLEVEGLIEKAK 432
++L GI +H ++ E +++ A+
Sbjct: 316 RMEVLKIHAAGIAKHGE-IDYEAVVKLAE 343
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 68/248 (27%), Positives = 114/248 (45%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D MD KQ + + +E + E Y+ +G RG L+YGPPG GK+ L A+A++
Sbjct: 165 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 223
Query: 279 ---FDVYDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V E G +R++ +A EN +I+ +++ID A AT
Sbjct: 224 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-----------AIATK 272
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D +V ++ L +LN +DG + + +I TN D LDPA LRPGR
Sbjct: 273 RFDAQTGAD----REVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGR 325
Query: 391 MDVHIHMSYCTSCGFKMLAS---SYLGITEHPLFLEVEGLIEKA-KVTPADVAEQLMRNE 446
+D I +++ S S + ++E +++E + + K++ AD+ + E
Sbjct: 326 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEE---VDLEDYVARPDKISGADINS--ICQE 380
Query: 447 VPEIALRE 454
+A+RE
Sbjct: 381 SGMLAVRE 388
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 68/248 (27%), Positives = 114/248 (45%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D MD KQ + + +E + E Y+ +G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 279 ---FDVYDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V E G +R++ +A EN +I+ +++ID A AT
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-----------AIATK 273
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D +V ++ L +LN +DG + + +I TN D LDPA LRPGR
Sbjct: 274 RFDAQTGAD----REVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGR 326
Query: 391 MDVHIHMSYCTSCGFKMLAS---SYLGITEHPLFLEVEGLIEKA-KVTPADVAEQLMRNE 446
+D I +++ S S + ++E +++E + + K++ AD+ + E
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEE---VDLEDYVARPDKISGADINS--ICQE 381
Query: 447 VPEIALRE 454
+A+RE
Sbjct: 382 SGMLAVRE 389
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 68/248 (27%), Positives = 114/248 (45%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D MD KQ + + +E + E Y+ +G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 279 ---FDVYDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V E G +R++ +A EN +I+ +++ID A AT
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-----------AIATK 273
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D +V ++ L +LN +DG + + +I TN D LDPA LRPGR
Sbjct: 274 RFDAQTGAD----REVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGR 326
Query: 391 MDVHIHMSYCTSCGFKMLAS---SYLGITEHPLFLEVEGLIEKA-KVTPADVAEQLMRNE 446
+D I +++ S S + ++E +++E + + K++ AD+ + E
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEE---VDLEDYVARPDKISGADINS--ICQE 381
Query: 447 VPEIALRE 454
+A+RE
Sbjct: 382 SGMLAVRE 389
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 68/248 (27%), Positives = 114/248 (45%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D MD KQ + + +E + E Y+ +G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 279 ---FDVYDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V E G +R++ +A EN +I+ +++ID A AT
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-----------AIATK 273
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D +V ++ L +LN +DG + + +I TN D LDPA LRPGR
Sbjct: 274 RFDAQTGAD----REVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGR 326
Query: 391 MDVHIHMSYCTSCGFKMLAS---SYLGITEHPLFLEVEGLIEKA-KVTPADVAEQLMRNE 446
+D I +++ S S + ++E +++E + + K++ AD+ + E
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEE---VDLEDYVARPDKISGADINS--ICQE 381
Query: 447 VPEIALRE 454
+A+RE
Sbjct: 382 SGMLAVRE 389
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 68/248 (27%), Positives = 114/248 (45%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D MD KQ + + +E + E Y+ +G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 279 ---FDVYDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V E G +R++ +A EN +I+ +++ID A AT
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-----------AIATK 273
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D +V ++ L +LN +DG + + +I TN D LDPA LRPGR
Sbjct: 274 RFDAQTGAD----REVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGR 326
Query: 391 MDVHIHMSYCTSCGFKMLAS---SYLGITEHPLFLEVEGLIEKA-KVTPADVAEQLMRNE 446
+D I +++ S S + ++E +++E + + K++ AD+ + E
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEE---VDLEDYVARPDKISGADINS--ICQE 381
Query: 447 VPEIALRE 454
+A+RE
Sbjct: 382 SGMLAVRE 389
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 68/248 (27%), Positives = 114/248 (45%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D MD KQ + + +E + E Y+ +G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 279 ---FDVYDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V E G +R++ +A EN +I+ +++ID A AT
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-----------AIATK 273
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D +V ++ L +LN +DG + + +I TN D LDPA LRPGR
Sbjct: 274 RFDAQTGAD----REVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGR 326
Query: 391 MDVHIHMSYCTSCGFKMLAS---SYLGITEHPLFLEVEGLIEKA-KVTPADVAEQLMRNE 446
+D I +++ S S + ++E +++E + + K++ AD+ + E
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEE---VDLEDYVARPDKISGADINS--ICQE 381
Query: 447 VPEIALRE 454
+A+RE
Sbjct: 382 SGMLAVRE 389
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 68/248 (27%), Positives = 114/248 (45%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D MD KQ + + +E + E Y+ +G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 279 ---FDVYDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V E G +R++ +A EN +I+ +++ID A AT
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-----------AIATK 273
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D +V ++ L +LN +DG + + +I TN D LDPA LRPGR
Sbjct: 274 RFDAQTGAD----REVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGR 326
Query: 391 MDVHIHMSYCTSCGFKMLAS---SYLGITEHPLFLEVEGLIEKA-KVTPADVAEQLMRNE 446
+D I +++ S S + ++E +++E + + K++ AD+ + E
Sbjct: 327 LDRKIEFPLPDRRQKRLIFSTITSKMNLSEE---VDLEDYVARPDKISGADINS--ICQE 381
Query: 447 VPEIALRE 454
+A+RE
Sbjct: 382 SGMLAVRE 389
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 64/212 (30%), Positives = 102/212 (48%)
Query: 192 FTLRYDRMHGMRGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKA 251
F L +R V +SVN+ T+D + ++K+ + + +E V + Y G +
Sbjct: 464 FALGNSNPSALRETVVESVNV----TWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLS 519
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDLELTNL-RGNME--LRNLLIATENK 305
+G L YGPPGTGK+ L A+A + NF V EL ++ G E +R++
Sbjct: 520 PSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAA 579
Query: 306 SILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSC 365
+ VV +D EL D AKA+ + D + +NQ +L +DG+ +
Sbjct: 580 APTVVF-LD---EL-DSIAKARGGSLGDAGGASDRV-VNQ--------LLTEMDGM--NA 623
Query: 366 GDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+I TN D++DPA LRPGR+D I++
Sbjct: 624 KKNVFVIGATNRPDQIDPAILRPGRLDQLIYV 655
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 60/251 (23%), Positives = 110/251 (43%)
Query: 228 KQM--IMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVY 282
KQM I + +E ++ + ++ +G RG L+YGPPGTGK+ + A+AN F +
Sbjct: 221 KQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLIN 280
Query: 283 DLE-LTNLRGNME--LRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
E ++ + G E LR E + I+ +++ID +D+ TN
Sbjct: 281 GPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDK------TNG------ 328
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+V + +S +L +DG+ ++I TN + +DPA R GR D + +
Sbjct: 329 -------EVERRVVSQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFDREVDI 379
Query: 398 SYCTSCGFKMLASSYLGITEHPLFLEVEGLI-EKAKVTPADVAEQLMRNEVPEIALRELI 456
+ G + + + +++E L E AD+A + +E +RE +
Sbjct: 380 GIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIAS--LCSEAAMQQIREKM 437
Query: 457 QFLEIKRRESD 467
+++ E D
Sbjct: 438 DLIDLDEDEID 448
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 57/182 (31%), Positives = 90/182 (49%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D+ +++ I + +E + E+Y +G +G +LYG PGTGK+ L A+AN +
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 244
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L +A E+ SI+ +++ID A T
Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID-----------AIGTK 293
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D N + Q T+ +LN +DG + S GD ++I+ TN + LDPA +RPGR
Sbjct: 294 RYDSN-----SGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGR 346
Query: 391 MD 392
+D
Sbjct: 347 ID 348
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 57/208 (27%), Positives = 98/208 (47%)
Query: 226 DMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
D + + + +E + E + VG +G LLYGPPGTGK+ L A+A+ N D L+
Sbjct: 146 DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS--NIDANFLK 203
Query: 286 LTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQ 345
+ + + + I + L+ E + + E Q +A+ + ++
Sbjct: 204 VVS----SAIIDKYIGESAR--LIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADR 257
Query: 346 VPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCG- 404
Q TL +LN +DG + + G ++I+ TN D LDPA LRPGR+D I +
Sbjct: 258 EIQRTLMELLNQLDG-FDNLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 405 FKMLASSYLGITEHPLFLEVEGLIEKAK 432
+L GI +H ++ E +++ A+
Sbjct: 316 MDILKIHAAGIAKHGE-IDYEAIVKLAE 342
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 149 (57.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 259
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 260 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 306
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 307 RPGRID 312
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 348 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 149 (57.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 259
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 260 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 306
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 307 RPGRID 312
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 348 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 149 (57.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 259
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 260 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 306
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 307 RPGRID 312
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 348 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 149 (57.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 259
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 260 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 306
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 307 RPGRID 312
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 348 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 149 (57.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 259
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 260 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 306
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 307 RPGRID 312
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 348 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 149 (57.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 259
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 260 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 306
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 307 RPGRID 312
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 348 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 149 (57.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 259
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 260 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 306
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 307 RPGRID 312
Score = 39 (18.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 348 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 149 (57.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 152 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 210
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 211 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 265
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 266 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 312
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 313 RPGRID 318
Score = 39 (18.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 354 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 399
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 149 (57.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 154 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 267
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 268 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 314
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 315 RPGRID 320
Score = 39 (18.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 356 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 401
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 149 (57.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 154 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRL 267
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 268 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 314
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 315 RPGRID 320
Score = 39 (18.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 356 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 401
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 70/234 (29%), Positives = 108/234 (46%)
Query: 229 QMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTN 288
Q I + +E + E Y ++G +G +LYG PGTGK+ L A+AN T
Sbjct: 198 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVAN-------STSATF 250
Query: 289 LRG-NMELRNLLIATENKSIL----VVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNL 343
LR EL + K + V +D+ SI D A T D +
Sbjct: 251 LRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEI-DAVGTKRYDAH-----SGG 304
Query: 344 NQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM---SYC 400
+ Q T+ +LN +DG + S GD ++I+ TN + LDPA LRPGR+D I
Sbjct: 305 EREIQRTMLELLNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRIDRKIEFPLPDIK 362
Query: 401 TSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRNEVPEIALRE 454
T + +S + ++E + LE E ++ K + + AD+ + + E +ALRE
Sbjct: 363 TRRRIFQIHTSKMTLSED-VNLE-EFVMTKDEFSGADI--KAICTEAGLLALRE 412
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 72/267 (26%), Positives = 124/267 (46%)
Query: 211 NLDH--PA--TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGK 266
N+ H P T+ + +D + + + +E + E + VG +G LLYGPPGTGK
Sbjct: 129 NMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGK 188
Query: 267 SSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKA 326
+ L A+A+ L D L++ + + + I + L+ E + + + Q
Sbjct: 189 TLLARAVASQL--DANFLKVVS----SAIVDKYIGESAR--LIREMFNYARDHQPCIIFM 240
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+A+ + ++ Q TL +LN +DG + S G ++I+ TN D LDPA L
Sbjct: 241 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDG-FDSLGQVKMIM-ATNRPDSLDPALL 298
Query: 387 RPGRMDVHIHMSYCTS-CGFKMLASSYLGITEHPLFLEVEGLIEKA-KVTPADVAEQLMR 444
RPGR+D I + ++L L I +H ++ E +++ + AD+
Sbjct: 299 RPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGE-IDYEAIVKLSDNFNGADLRNVCTE 357
Query: 445 NEVPEI-ALRE-LIQ--FLEIKRRESD 467
+ I A RE +IQ F++ R+ SD
Sbjct: 358 AGLFAIRAEREYVIQGDFMKAVRKVSD 384
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 58/212 (27%), Positives = 101/212 (47%)
Query: 196 YDRMHGMRGDVWQSVNLDHPAT-FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKR 254
Y + +R + + L+ P + + ++K+ +++ ++ ++ + ++N+G + +
Sbjct: 475 YHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPK 534
Query: 255 GYLLYGPPGTGKSSLIAAMANY--LNF-DVYDLELTNLR-GNME--LRNLL--IATENKS 306
G LLYGPPG K+ A+A LNF V E+ N G E +R + + S
Sbjct: 535 GVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPS 594
Query: 307 ILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCG 366
I+ ++ID DR + T A NV L+ +LN IDG+ G
Sbjct: 595 IIFFDEIDAIAG--DRDGDSSTTAAS--NV--------------LTSLLNEIDGVEELKG 636
Query: 367 DERIIIFTTNHKDRLDPAFLRPGRMDVHIHMS 398
+I+ TN +DPA LRPGR+D HI+++
Sbjct: 637 V--VIVGATNKPTEIDPALLRPGRLDRHIYVA 666
Score = 131 (51.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 47/192 (24%), Positives = 82/192 (42%)
Query: 211 NLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLI 270
NL T+D + S +++ +E + + + G + RG LL+GPPGTGK+ L+
Sbjct: 221 NLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLL 280
Query: 271 AAMANYLNFDVYDLELTNLRGNMELRNLLIATEN--KSIL-VVEDIDCSIELQDRFAKAK 327
+AN + + + + G + L TEN + I + SI D
Sbjct: 281 RCVAN----SITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIA 336
Query: 328 ATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDE-RIIIF-TTNHKDRLDPAF 385
+ D + + ++ +L +DG+ GD RI++ TN + +D A
Sbjct: 337 PSRTSD--------DSGETESRVVAQLLTVMDGM----GDNGRIVVIGATNRPNSIDSAL 384
Query: 386 LRPGRMDVHIHM 397
RPGR D + +
Sbjct: 385 RRPGRFDQEVEI 396
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 62/200 (31%), Positives = 92/200 (46%)
Query: 204 GDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFV---KRKEFYRNVGKAWKRGYLLYG 260
GD+ VN D +TL + D + M+ +E V KE + N+G +G L+YG
Sbjct: 113 GDL-VGVNKDSYLILETLPTEYDSRVKAMELVEAIVLPMNHKEKFENLGIQPPKGVLMYG 171
Query: 261 PPGTGKSSLIAAMANYLNFDVYDL---ELTNL---RGNMELRNLLIATENK--SILVVED 312
PPGTGK+ L A A L +L + G +R+ + K SI+ +++
Sbjct: 172 PPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDE 231
Query: 313 IDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIII 372
+D +I + RF KA D V Q T+ +LN +DG + + +I
Sbjct: 232 LD-AIGTK-RFDSEKAG---DREV-----------QRTMLELLNQLDGFQPNTQVK--VI 273
Query: 373 FTTNHKDRLDPAFLRPGRMD 392
TN D LDPA LR GR+D
Sbjct: 274 AATNRVDILDPALLRSGRLD 293
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 149 (57.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D+ +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 172 STYEMVGGLDTQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 230
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 231 HHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIGS----SRV 285
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 286 EGSRGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 332
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 333 RPGRID 338
Score = 38 (18.4 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 388 PGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
PG + S CT G L + +T+ + V +++K
Sbjct: 378 PGASGAEVK-SVCTEAGMFALRERRIHVTQEDFEMAVGKVMQK 419
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 148 (57.2 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 59/186 (31%), Positives = 95/186 (51%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 141 STYEMIGGLDKQIKE-IKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVA 199
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ + V EL G +R L + A E+ SI+ +++ID SI ++
Sbjct: 200 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID-SIG-----SRL 253
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ + D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 254 EGGSGGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALL 300
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 301 RPGRID 306
Score = 39 (18.8 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 11/47 (23%), Positives = 19/47 (40%)
Query: 384 AFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK 430
A L PG + CT G L + +T+ + V +++K
Sbjct: 342 AELMPGASGAEVK-GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 387
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 144 (55.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 51/172 (29%), Positives = 83/172 (48%)
Query: 226 DMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLE 285
D + + + +E + E + VG +G LLYGPPGTGK+ L A+A+ N D L+
Sbjct: 146 DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS--NIDANFLK 203
Query: 286 LTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQ 345
+ + + + I + L+ E + + E Q +A+ + ++
Sbjct: 204 VVS----SAIIDKYIGESAR--LIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADR 257
Query: 346 VPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
Q TL +LN +DG + G ++I+ TN D LDPA LRPGR+D I +
Sbjct: 258 EIQRTLMELLNQLDG-FDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKIEI 307
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 148 (57.2 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 70/258 (27%), Positives = 114/258 (44%)
Query: 208 QSVNLDHP-ATF-DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTG 265
+ ++ D P TF D +D ++++ +++ F++ Y+ +G +G LLYGPPGTG
Sbjct: 151 KQLSKDMPKTTFADVAGVDEAVEELY--EIKDFLQNPSRYQALGAKIPKGVLLYGPPGTG 208
Query: 266 KSSLIAAMANYLN---FDVYDLELTNLR---GNMELRNLLIATENKS--ILVVEDIDCSI 317
K+ L A+A F + + + G +R+L + S I+ V++ID
Sbjct: 209 KTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAV- 267
Query: 318 ELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNH 377
R A D + LNQ +L +DG G I+I TN
Sbjct: 268 ---GRQRGAGLGGGHD----EREQTLNQ--------LLVEMDGFGDRAGV--ILIAATNR 310
Query: 378 KDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAK-VTPA 436
D LDPA LRPGR D I +S G + + + +++GL ++ +T A
Sbjct: 311 PDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGA 370
Query: 437 DVAEQLMRNEVPEIALRE 454
D+A + NE + RE
Sbjct: 371 DLANVI--NEAALLTARE 386
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 152 (58.6 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 72/255 (28%), Positives = 117/255 (45%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF+ +A + K+ + +++ +F+K + + +G +G LL GPPGTGK+ L A+A
Sbjct: 151 TFEDVAGVDEAKEEL-EEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGE 209
Query: 277 LN---FDVYDLELTNLR---GNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
F + + + G +R+L + + + ++ ID I+ R A
Sbjct: 210 AGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIF-ID-EIDAVGRHRGAGLGG 267
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + LNQ +L +DG S+ G I+I TN D LDPA LRPGR
Sbjct: 268 GHD----EREQTLNQ--------LLVEMDGFESNEGV--ILIAATNRPDVLDPALLRPGR 313
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVE-GLIEKAKVTPADVAEQLMR--NEV 447
D + + G +M+ + T PL +V+ G+I A+ TP L NE
Sbjct: 314 FDRQVVVPQPDVKGREMILKVHTKKT--PLASDVDLGVI--ARGTPGFSGADLSNVVNEA 369
Query: 448 PEIALRELIQFLEIK 462
+A R+ F+E+K
Sbjct: 370 ALLAARKDKSFVEMK 384
Score = 38 (18.4 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 102 ETKISCSVEKDEEIVDVFNGVQLKW 126
E KI+ S + +EE V F+ + + W
Sbjct: 85 EKKINVSAKPEEEKVSWFS-IFISW 108
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 144 (55.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 56/179 (31%), Positives = 84/179 (46%)
Query: 227 MKQMIMDDLERFV---KRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYD 283
+++ I + +E V KE + +G +G LLYGPPGTGK+ + A A N
Sbjct: 175 LEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 234
Query: 284 LELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNL 343
L L M + + + +L E C I + + A T D V +
Sbjct: 235 LAGPQLV-QMFIGDGAKLVRDAFLLAKEKSPCIIFIDE--IDAIGTKRFDSEV-----SG 286
Query: 344 NQVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHMSYCT 401
++ Q T+ +LN +DG +SS D+RI +I TN D LDPA +R GR+D I + T
Sbjct: 287 DREVQRTMLELLNQLDG-FSS--DDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 342
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 144 (55.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 57/179 (31%), Positives = 83/179 (46%)
Query: 227 MKQMIMDDLERFV---KRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYD 283
+++ I + +E V KE + +G +G LLYGPPGTGK+ + A A N
Sbjct: 176 LEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 235
Query: 284 LELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNL 343
L L M + + + L E C I + + A T D V +
Sbjct: 236 LAGPQLV-QMFIGDGAKLVRDAFQLAKEKAPCIIFIDE--IDAIGTKRFDSEV-----SG 287
Query: 344 NQVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHMSYCT 401
++ Q T+ +LN +DG +SS DERI +I TN D LDPA +R GR+D I + T
Sbjct: 288 DREVQRTMLELLNQLDG-FSS--DERIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 343
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 150 (57.9 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 75/262 (28%), Positives = 122/262 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ + +++K+ + + + ++ K Y + +G LLYGPPG GK+ L A+AN
Sbjct: 932 TWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANE 991
Query: 277 L--NF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF V EL + G E +R+L S ++ D E+ D AK + +N
Sbjct: 992 CKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIF-FD---EI-DSLAKERNSN 1046
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
N N ++ +L IDG+ II TN D LD A RPGR
Sbjct: 1047 T---N--------NDASDRVINQILTEIDGINEK--KTIFIIAATNRPDILDKALTRPGR 1093
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEH-PLFLEVEGLIEKAKVTP----ADVAEQLMRN 445
+D I++S K S + I ++ PL +V+ + + AK T AD+ L ++
Sbjct: 1094 LDKLIYISLPD---LKSRYSIFKAILKNTPLNEDVD-IHDMAKRTEGFSGADITN-LCQS 1148
Query: 446 EVPEIALRELIQFLEIKRRESD 467
V E A++E I L I+++E +
Sbjct: 1149 AVNE-AIKETIHLLNIRKKEQE 1169
Score = 125 (49.1 bits), Expect = 0.00035, P = 0.00035
Identities = 50/189 (26%), Positives = 91/189 (48%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ L I + +E +K E + ++G + +G L++G PGTGK+S+ A+AN
Sbjct: 525 TYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANE 584
Query: 277 LNFDVYDL---ELTNLR-GNME--LRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKA 328
N Y + E+ + G E LR + K+ I+ +++ID SI + ++K+
Sbjct: 585 SNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEID-SIANK----RSKS 639
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRP 388
N ++ V+ S +L +DGL + + +++ TN + +DPA R
Sbjct: 640 NNELEKRVV--------------SQLLTLMDGLKKN--NNVLVLAATNRPNSIDPALRRF 683
Query: 389 GRMDVHIHM 397
GR D I +
Sbjct: 684 GRFDREIEI 692
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 150 (57.9 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 75/262 (28%), Positives = 122/262 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ + +++K+ + + + ++ K Y + +G LLYGPPG GK+ L A+AN
Sbjct: 932 TWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANE 991
Query: 277 L--NF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF V EL + G E +R+L S ++ D E+ D AK + +N
Sbjct: 992 CKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIF-FD---EI-DSLAKERNSN 1046
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
N N ++ +L IDG+ II TN D LD A RPGR
Sbjct: 1047 T---N--------NDASDRVINQILTEIDGINEK--KTIFIIAATNRPDILDKALTRPGR 1093
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEH-PLFLEVEGLIEKAKVTP----ADVAEQLMRN 445
+D I++S K S + I ++ PL +V+ + + AK T AD+ L ++
Sbjct: 1094 LDKLIYISLPD---LKSRYSIFKAILKNTPLNEDVD-IHDMAKRTEGFSGADITN-LCQS 1148
Query: 446 EVPEIALRELIQFLEIKRRESD 467
V E A++E I L I+++E +
Sbjct: 1149 AVNE-AIKETIHLLNIRKKEQE 1169
Score = 125 (49.1 bits), Expect = 0.00035, P = 0.00035
Identities = 50/189 (26%), Positives = 91/189 (48%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T++ L I + +E +K E + ++G + +G L++G PGTGK+S+ A+AN
Sbjct: 525 TYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANE 584
Query: 277 LNFDVYDL---ELTNLR-GNME--LRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKA 328
N Y + E+ + G E LR + K+ I+ +++ID SI + ++K+
Sbjct: 585 SNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEID-SIANK----RSKS 639
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRP 388
N ++ V+ S +L +DGL + + +++ TN + +DPA R
Sbjct: 640 NNELEKRVV--------------SQLLTLMDGLKKN--NNVLVLAATNRPNSIDPALRRF 683
Query: 389 GRMDVHIHM 397
GR D I +
Sbjct: 684 GRFDREIEI 692
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 59/196 (30%), Positives = 98/196 (50%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TFD + ++ + + + +E +K E ++ VG +G LLYGPPGTGK+ L A+A
Sbjct: 179 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 238
Query: 277 L--NFDVYDLE--LTNLRGNME--LRNLLI-ATENKS-ILVVEDIDCSIELQDRFAKAKA 328
+ NF + G +R + A E++ I+ ++++D +I + RF++
Sbjct: 239 IGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVD-AIGGR-RFSEG-- 294
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRP 388
T+A D + Q TL +L +DG + + G +II+ TN D LDPA LRP
Sbjct: 295 TSA-DREI-----------QRTLMELLTQMDG-FDNLGQTKIIM-ATNRPDTLDPALLRP 340
Query: 389 GRMDVHIHMSYCTSCG 404
GR+D + + G
Sbjct: 341 GRLDRKVEIPLPNEAG 356
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 147 (56.8 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 75/249 (30%), Positives = 117/249 (46%)
Query: 227 MKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN--YLNF-DVYD 283
+K+ + + ++ V+ + + G RG L YGPPG GK+ L A+AN NF V
Sbjct: 482 VKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKG 541
Query: 284 LELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPV 340
EL + G E +R++ + + V+ D EL D AKA+ N D
Sbjct: 542 PELLTMWFGESEANVRDIFDKARSAAPCVLF-FD---EL-DSIAKARGGNVGDAGGAADR 596
Query: 341 MNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYC 400
+ +NQ+ L +DG+ + II TN D +DPA LRPGR+D I++
Sbjct: 597 V-INQI--------LTEMDGMGAK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 645
Query: 401 TSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNEVPEIALRELI 456
+ + + L + PL EV+ L AKVT AD+ E R ++A+R+ I
Sbjct: 646 DDKSREAILKANL--RKSPLAKEVD-LTYIAKVTQGFSGADLTEICQR--ACKLAIRQAI 700
Query: 457 QFLEIKRRE 465
+ EI+R +
Sbjct: 701 E-AEIRREK 708
Score = 120 (47.3 bits), Expect = 0.00074, P = 0.00074
Identities = 51/187 (27%), Positives = 85/187 (45%)
Query: 228 KQM--IMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVY 282
KQ+ I + +E ++ ++ +G RG L+YGPPGTGK+ + A+AN F +
Sbjct: 208 KQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLIN 267
Query: 283 DLEL-TNLRGNME--LRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
E+ + L G E LR E S I+ +++ID +D+ T+
Sbjct: 268 GPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDK------THG------ 315
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+V + +S +L +DG+ S I++ TN + +DPA R GR D I +
Sbjct: 316 -------EVERRIVSQLLTLMDGMKKS--SHLIVMAATNRPNSIDPALRRFGRFDREIDI 366
Query: 398 SYCTSCG 404
+ G
Sbjct: 367 GIPDATG 373
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 147 (56.8 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 53/191 (27%), Positives = 92/191 (48%)
Query: 217 TFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
T+D + ++S +K I + +E +K+ E +++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLKA-IREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 276 YLNFDVYDLE----LTNLRGNME--LRNLLI-AT-ENKSILVVEDIDCSIELQDRFAKAK 327
+ V + ++ G E LR + AT + SI+ ++++D K
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--------K 461
Query: 328 ATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIF-TTNHKDRLDPAFL 386
A ++V + ++ +L +DG+ S + R+++ TN LD A
Sbjct: 462 REGAQ-----------SEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALR 510
Query: 387 RPGRMDVHIHM 397
RPGR D I +
Sbjct: 511 RPGRFDKEIEI 521
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 146 (56.5 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 58/197 (29%), Positives = 94/197 (47%)
Query: 208 QSVNL-DHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGK 266
Q VN D TFD + D ++ ++++ ++K E Y +G +G LL GPPGTGK
Sbjct: 236 QEVNPEDVQVTFDDVR-GMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGK 294
Query: 267 SSLIAAMANYLN---FDVYDLELTNL---RGNMELRNLLIATENKS--ILVVEDIDCSIE 318
+ L A+A F E + +G +R+L + ++ I+ +++ID S+
Sbjct: 295 TLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEID-SV- 352
Query: 319 LQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHK 378
+ +N+ I P N T++ +L+ +DG + G I+I TN
Sbjct: 353 -----GSKRVSNS-----IHPYANQ------TINQLLSEMDGFTRNEGI--IVIAATNRV 394
Query: 379 DRLDPAFLRPGRMDVHI 395
D LD A LRPGR DV +
Sbjct: 395 DDLDKALLRPGRFDVRV 411
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 147 (56.8 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 53/191 (27%), Positives = 92/191 (48%)
Query: 217 TFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN 275
T+D + ++S +K I + +E +K+ E +++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLKA-IREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 276 YLNFDVYDLE----LTNLRGNME--LRNLLI-AT-ENKSILVVEDIDCSIELQDRFAKAK 327
+ V + ++ G E LR + AT + SI+ ++++D K
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP--------K 461
Query: 328 ATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIF-TTNHKDRLDPAFL 386
A ++V + ++ +L +DG+ S + R+++ TN LD A
Sbjct: 462 REGAQ-----------SEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALR 510
Query: 387 RPGRMDVHIHM 397
RPGR D I +
Sbjct: 511 RPGRFDKEIEI 521
Score = 120 (47.3 bits), Expect = 0.00084, P = 0.00084
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 199 MHGMRGDVWQSVNLDHP-ATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYL 257
M+ +R + V +D P ++ + ++K + +E +K + + +G +G L
Sbjct: 606 MNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVL 665
Query: 258 LYGPPGTGKSSLIAAMANY--LNF-DVYDLELTNLRGNMELRNLLIATENKSILVVEDID 314
LYGPPG K+ + A+AN LNF + EL N E + K+ V I
Sbjct: 666 LYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVG-ESERAVREIFRKARAVAPSII 724
Query: 315 CSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFT 374
EL D A + +++ NV V L+ +L +DG+ ++
Sbjct: 725 FFDEL-DALAVERGSSSGAGNVADRV----------LAQLLTEMDGIEQL--KNVTVLAA 771
Query: 375 TNHKDRLDPAFLRPGRMDVHIHM 397
TN DR+D A +RPGR+D I++
Sbjct: 772 TNRPDRIDKALMRPGRIDRIIYV 794
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 145 (56.1 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 73/257 (28%), Positives = 112/257 (43%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A ++K+ + + +E F+K Y +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 277 LN---FDVYDLELTNLR---GNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
F + + + G +R+L + + +V ID I+ R A
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVF-ID-EIDAVGRQRGAGLGG 272
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + LNQ+ V + G N +G+ III TN D LDPA LRPGR
Sbjct: 273 GHD----EREQTLNQL-LVEMDGF-NSNEGI--------IIIAATNRPDILDPALLRPGR 318
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQL--MRNEVP 448
D HI + G K + + + PL +V+ L A+ TP L M NE
Sbjct: 319 FDRHIVVDTPDINGRKEILKVH--VKGKPLGDDVD-LDVLARRTPGFTGADLANMVNEAA 375
Query: 449 EIALRELIQFLEIKRRE 465
+A R + + ++ E
Sbjct: 376 LLAARRNKKVINMEEME 392
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 145 (56.1 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 73/257 (28%), Positives = 112/257 (43%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TF +A ++K+ + + +E F+K Y +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 277 LN---FDVYDLELTNLR---GNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
F + + + G +R+L + + +V ID I+ R A
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVF-ID-EIDAVGRQRGAGLGG 272
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + LNQ+ V + G N +G+ III TN D LDPA LRPGR
Sbjct: 273 GHD----EREQTLNQL-LVEMDGF-NSNEGI--------IIIAATNRPDILDPALLRPGR 318
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQL--MRNEVP 448
D HI + G K + + + PL +V+ L A+ TP L M NE
Sbjct: 319 FDRHIVVDTPDINGRKEILKVH--VKGKPLGDDVD-LDVLARRTPGFTGADLANMVNEAA 375
Query: 449 EIALRELIQFLEIKRRE 465
+A R + + ++ E
Sbjct: 376 LLAARRNKKVINMEEME 392
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 142 (55.0 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 75/256 (29%), Positives = 127/256 (49%)
Query: 209 SVNLDHPATFDTLAMD--SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGK 266
+++L+ P + + +D + + + +E +K E ++ VG +G LLYGPPGTGK
Sbjct: 125 NMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGK 184
Query: 267 SSLIAAMANYL--NF-DVYDLELTNLR-GNME--LRNLL-IATENKS-ILVVEDIDCSIE 318
+ L A+A+ + NF V + + G +R + A E++ I+ +++ID +I
Sbjct: 185 TLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEID-AIG 243
Query: 319 LQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHK 378
+ RF++ T+A D + Q TL +LN +DG + G +II+ TN
Sbjct: 244 GR-RFSEG--TSA-DREI-----------QRTLMELLNQLDG-FDYLGKTKIIM-ATNRP 286
Query: 379 DRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIE-KAKVTPAD 437
D LDPA LR GR+D I + G ++ L I H +++EG I+ ++ V +D
Sbjct: 287 DTLDPALLRAGRLDRKIEIPLPNEVG-RL---EILKI--HSSTVQMEGDIDFESVVKMSD 340
Query: 438 VAEQL-MRNEVPEIAL 452
+RN V E L
Sbjct: 341 GLNGADLRNVVTEAGL 356
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 47/156 (30%), Positives = 77/156 (49%)
Query: 239 VKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNL 298
+KR E Y++VG + G LL+GPPG GK+ L A+AN + ++RG EL N
Sbjct: 512 IKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKAN-----FISIRGP-ELLNK 565
Query: 299 LIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMN--LNQVPQVTLSGMLN 356
+ +++ + L+ R + +L+ + P + L++ ++ +L
Sbjct: 566 YVGESERAVR-------QVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLT 618
Query: 357 FIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+DGL G +I TN D +DPA LRPGR+D
Sbjct: 619 ELDGLSDRSGV--YVIAATNRPDIIDPAMLRPGRLD 652
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 63/212 (29%), Positives = 102/212 (48%)
Query: 192 FTLRYDRMHGMRGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKA 251
F L +R V ++VN+ T+D + ++K + + +E V + Y+ G A
Sbjct: 465 FALGNSNPSALRETVVENVNV----TWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLA 520
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDLELTNL-RGNME--LRNLLIATENK 305
+G L +GPPGTGK+ L A+A + NF V EL ++ G E +R++
Sbjct: 521 PTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAA 580
Query: 306 SILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSC 365
+ VV +D EL D AKA+ + D + +NQ +L +DG+ +
Sbjct: 581 APTVVF-LD---EL-DSIAKARGGSHGDAGGASDRV-VNQ--------LLTEMDGM--NA 624
Query: 366 GDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+I TN D++DPA LRPGR+D I++
Sbjct: 625 KKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 48/175 (27%), Positives = 82/175 (46%)
Query: 228 KQM--IMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVY 282
KQM I + +E ++ + ++++G +G L+YGPPGTGK+ + A+AN F +
Sbjct: 222 KQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLIN 281
Query: 283 DLEL-TNLRGNME--LRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
E+ + + G E LR E S I+ +++ID +D+ TN
Sbjct: 282 GPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK------TNG------ 329
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+V + +S +L +DG+ ++I TN + +DPA R GR D
Sbjct: 330 -------EVERRVVSQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFD 375
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 63/212 (29%), Positives = 102/212 (48%)
Query: 192 FTLRYDRMHGMRGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKA 251
F L +R V ++VN+ T+D + ++K + + +E V + Y+ G A
Sbjct: 465 FALGNSNPSALRETVVENVNV----TWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLA 520
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDLELTNL-RGNME--LRNLLIATENK 305
+G L +GPPGTGK+ L A+A + NF V EL ++ G E +R++
Sbjct: 521 PTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAA 580
Query: 306 SILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSC 365
+ VV +D EL D AKA+ + D + +NQ +L +DG+ +
Sbjct: 581 APTVVF-LD---EL-DSIAKARGGSHGDAGGASDRV-VNQ--------LLTEMDGM--NA 624
Query: 366 GDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+I TN D++DPA LRPGR+D I++
Sbjct: 625 KKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 48/175 (27%), Positives = 82/175 (46%)
Query: 228 KQM--IMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVY 282
KQM I + +E ++ + ++++G +G L+YGPPGTGK+ + A+AN F +
Sbjct: 222 KQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLIN 281
Query: 283 DLEL-TNLRGNME--LRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
E+ + + G E LR E S I+ +++ID +D+ TN
Sbjct: 282 GPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK------TNG------ 329
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+V + +S +L +DG+ ++I TN + +DPA R GR D
Sbjct: 330 -------EVERRVVSQLLTLMDGM--KARSNVVVIAATNRPNSIDPALRRFGRFD 375
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 67/244 (27%), Positives = 110/244 (45%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
TF +A + K+ + +++ F+K + Y +G RG LL G PGTGK+ L A+A
Sbjct: 327 TFADVAGVDEAKEEL-EEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 385
Query: 276 ----YLNFDVYD-LELTNLRGNMELRNLLIATENK--SILVVEDIDCSIELQDRFAKAKA 328
+++ + +EL G +R+L + + SI+ +++ID + +D K +
Sbjct: 386 SDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD--GKFRM 443
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRP 388
+ N + TL+ +L +DG SS I++ TN D LDPA RP
Sbjct: 444 VS-------------NDEREQTLNQLLTEMDGFDSSSAV--IVLGATNRADVLDPALRRP 488
Query: 389 GRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRNEVP 448
GR D + + G + + ++ E PL +V L A +T L N V
Sbjct: 489 GRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVN-LASIASMTTGFTGADLA-NLVN 546
Query: 449 EIAL 452
E AL
Sbjct: 547 EAAL 550
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 67/248 (27%), Positives = 113/248 (45%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D MD KQ + + +E + E Y+ +G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224
Query: 279 ---FDVYDLELTNL---RGNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
V E G +R++ +A EN +I+ +++ID A AT
Sbjct: 225 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEID-----------AIATK 273
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D +V ++ L +LN +DG + + +I TN D LDPA L PGR
Sbjct: 274 RFDAQTGAD----REVQRILLE-LLNQMDGFDQNVNVK--VIMATNRADTLDPALLCPGR 326
Query: 391 MDVHIHMSYCTSCGFKMLAS---SYLGITEHPLFLEVEGLIEKA-KVTPADVAEQLMRNE 446
+D I +++ S S + ++E +++E + + K++ AD+ + E
Sbjct: 327 LDRKIEFPLPDRRQKRLVFSTITSKMNLSEE---VDLEDYVARPDKISGADINS--ICQE 381
Query: 447 VPEIALRE 454
+A+RE
Sbjct: 382 AGMLAVRE 389
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 59/186 (31%), Positives = 94/186 (50%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +++ I + +E VK E + +G +G LLYGPPGTGK+ L A+A
Sbjct: 140 STYEMVGGLDKQIQE-IKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVA 198
Query: 275 NYLN---FDVYDLELTNL---RGNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKA 326
++ V EL G+ +R L + A E+ SI+ +++ID SI A+
Sbjct: 199 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID-SIGS----ARL 253
Query: 327 KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFL 386
+ T D V Q T+ +LN +DG ++ + +I TN D LD A L
Sbjct: 254 E-TGTGDSEV-----------QRTMLELLNQLDGFEATKNIK--VIMATNRIDVLDQALL 299
Query: 387 RPGRMD 392
RPGR+D
Sbjct: 300 RPGRID 305
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 56/163 (34%), Positives = 88/163 (53%)
Query: 243 EFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDLELTNLR-GNME--LR 296
E ++ VG +G LL+GPPGTGK+ L A+A+ L NF V + + G +R
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 297 NLL-IATENKSILV-VEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGM 354
+ A +++ +V +++ID +I + RF++ T+A D + Q TL +
Sbjct: 234 EMFNYARDHQPCIVFMDEID-AIGGR-RFSEG--TSA-DREI-----------QRTLMEL 277
Query: 355 LNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
LN +DG + S G ++I+ TN D LDPA LRPGR+D I +
Sbjct: 278 LNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLDRKIEI 318
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 56/163 (34%), Positives = 88/163 (53%)
Query: 243 EFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDLELTNLR-GNME--LR 296
E ++ VG +G LL+GPPGTGK+ L A+A+ L NF V + + G +R
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIR 233
Query: 297 NLL-IATENKSILV-VEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGM 354
+ A +++ +V +++ID +I + RF++ T+A D + Q TL +
Sbjct: 234 EMFNYARDHQPCIVFMDEID-AIGGR-RFSEG--TSA-DREI-----------QRTLMEL 277
Query: 355 LNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
LN +DG + S G ++I+ TN D LDPA LRPGR+D I +
Sbjct: 278 LNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLDRKIEI 318
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 131 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 188
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 189 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 242
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 243 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 293
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 58/189 (30%), Positives = 85/189 (44%)
Query: 211 NLDHPA-TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSL 269
N+D P TF +A + KQ + + +E F+K +E ++ +G +G LL GPPGTGK+ L
Sbjct: 150 NMDKPTITFANVAGVDEAKQEVGEVVE-FLKSREKFQALGARIPKGILLIGPPGTGKTLL 208
Query: 270 IAAMANYLN---FDVYDLELTNLR---GNMELRNLLIATENKSILVVEDIDCSIELQDRF 323
A+A F + E + G +R+L + + ++ ID I+ R
Sbjct: 209 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIF-ID-EIDAVGRQ 266
Query: 324 AKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDP 383
A D + LNQ+ L +DG I+I TN D LDP
Sbjct: 267 RGAGLGGGHD----EREQTLNQI--------LVEMDGF--DTDTSVIVIAATNRPDILDP 312
Query: 384 AFLRPGRMD 392
A LRPGR D
Sbjct: 313 ALLRPGRFD 321
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 196
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 197 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 250
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 251 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 196
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 197 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 250
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 251 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 196
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 197 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 250
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 251 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 196
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 197 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 250
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 251 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 196
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 197 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 250
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 251 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 196
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 197 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 250
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 251 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 139 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 196
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 197 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 250
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 251 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 139 (54.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 145 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 202
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 203 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 256
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 257 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 307
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 153 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 210
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 211 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 264
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 265 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 153 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 210
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 211 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 264
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 265 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 225 SDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL 284
S+ + + + +E + E ++ VG +G LLYGPPGTGK+ L A+A+ L D L
Sbjct: 153 SEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFL 210
Query: 285 ELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLN 344
++ + + + I + L+ E + + + Q +A+ + +
Sbjct: 211 KVVS----SSIVDKYIGESAR--LIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 264
Query: 345 QVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMDVHIHM 397
+ Q TL +LN +DG + R+ +I TN D LDPA LRPGR+D IH+
Sbjct: 265 REIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 144 (55.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/187 (26%), Positives = 84/187 (44%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D + ++ +L +++K + + +G G LL GPPG GK+ + A+A
Sbjct: 431 DVAGIDEAVDEL--QELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAG 488
Query: 279 FDVYDL---ELTNLR---GNMELRNLLI-ATENK-SILVVEDIDCSIELQDRFAKAKATN 330
Y + E + G+ +R+L A NK S++ +++ID + K +
Sbjct: 489 VPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQ 548
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
+ Q + TL+ +L +DG G I + TN +D LDPA LRPGR
Sbjct: 549 LYNA--------ATQERETTLNQLLIELDGF--DTGKGVIFLGATNRRDLLDPALLRPGR 598
Query: 391 MDVHIHM 397
D I +
Sbjct: 599 FDRKIRV 605
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 67/248 (27%), Positives = 113/248 (45%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
+F +A + K + + ++ ++K + Y +G +G LL GPPG GK+ L A+A
Sbjct: 298 SFKDVAGMREAKMEVKEFVD-YLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATE 356
Query: 277 LNFDVYDL---ELTNLRGNM---ELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
+ E + G + +R+L ++ +V ID E+ D K ++TN
Sbjct: 357 AQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVY-ID---EI-DAVGKKRSTN 411
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
+ + LNQ +L +DG+ ++ D I++ +TN D LD A +RPGR
Sbjct: 412 MSGFSNTEEEQTLNQ--------LLVEMDGMGTT--DHVIVLASTNRADILDNALMRPGR 461
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D HI + T K + +L I + + L A++TP AD+A + NE
Sbjct: 462 LDRHIFIDLPTLQERKEIFEQHLKILKLTQPADFYSL-RLAELTPGFSGADIAN--ICNE 518
Query: 447 VPEIALRE 454
A RE
Sbjct: 519 AALHAARE 526
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 68/249 (27%), Positives = 114/249 (45%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
TF +A + K+ + +++ F++ E Y +G RG LL G PGTGK+ L A+A
Sbjct: 323 TFADVAGVDEAKEEL-EEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 381
Query: 276 ----YLNFDVYD-LELTNLRGNMELRNLLIATENK--SILVVEDIDCSIELQDRFAKAKA 328
+++ + +EL G +R+L + + SI+ +++ID + +D K +
Sbjct: 382 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD--GKFR- 438
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRP 388
M N + TL+ +L +DG S+ I++ TN D LDPA RP
Sbjct: 439 ------------MGSNDEREQTLNQLLTEMDGFDSNSAV--IVLGATNRADVLDPALRRP 484
Query: 389 GRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVE-GLIEKAKV--TPADVAEQLMRN 445
GR D + + G + + ++ E PL +V G I T AD+A + N
Sbjct: 485 GRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLV--N 542
Query: 446 EVPEIALRE 454
E +A R+
Sbjct: 543 EAALLAGRK 551
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 143 (55.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 65/247 (26%), Positives = 118/247 (47%)
Query: 226 DMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVY 282
++K+ +++ ++ V E ++ G + RG L YGPPGTGK+ L A+AN NF V
Sbjct: 506 EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 565
Query: 283 DLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQP 339
EL ++ G E +R++ + VV +D EL D AK++ + D
Sbjct: 566 GPELLSMWFGESESNIRDIFDKARAAAPCVVF-LD---EL-DSIAKSRGGSVGDAGGASD 620
Query: 340 VMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSY 399
+ +NQ +L +DG+ S +I TN ++LD A +RPGR+D +++
Sbjct: 621 RV-VNQ--------LLTEMDGMTSK--KNVFVIGATNRPEQLDAALVRPGRLDTLVYVPL 669
Query: 400 CTSCGFKMLASSYLGITEHPLFLEVEGLIEKAK-VTPADVAEQLMRNEVPEIALRELIQF 458
+ + + L T +++E + K + AD+ + ++A++E I
Sbjct: 670 PDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLG--FVTQRAVKLAIKESIS- 726
Query: 459 LEIKRRE 465
EI+R++
Sbjct: 727 AEIERQK 733
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 228 KQM--IMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVY 282
KQM I + +E ++ + ++++G RG L+YGPPGTGK+ + A+AN F +
Sbjct: 232 KQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLIN 291
Query: 283 DLEL-TNLRGNME--LRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
E+ + + G E LR E S I+ +++ID SI K + TN
Sbjct: 292 GPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEID-SIA-----PKREKTNG------ 339
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+V + +S +L +DG+ +++ TN + +DPA R GR D
Sbjct: 340 -------EVERRVVSQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRFD 385
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 143 (55.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 50/157 (31%), Positives = 75/157 (47%)
Query: 239 VKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNL 298
+KR E Y VG + G LL+GPPG GK+ L A+AN + +++G EL N
Sbjct: 553 IKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRAN-----FISIKGP-ELLNK 606
Query: 299 LIATENKSIL-VVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNF 357
+ +SI V S+ F + +D V + +L++ ++ +L
Sbjct: 607 YVGESERSIRQVFTRARASVPCVIFF------DELDALVPRRDTSLSESSSRVVNTLLTE 660
Query: 358 IDGLWSSCGDER--IIIFTTNHKDRLDPAFLRPGRMD 392
+DGL D R +I TN D +DPA LRPGR+D
Sbjct: 661 LDGL----NDRRGIFVIGATNRPDMIDPAMLRPGRLD 693
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 54/183 (29%), Positives = 92/183 (50%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D +++++ + + +KR + ++++G +G L+YGPPGTGK+ L A A N
Sbjct: 182 DVGGLDKQIEELV-EAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTN 240
Query: 279 FDVYDLELTNL------RGNMELRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKATN 330
L L G +R+ + K+ I+ ++++D +I + RF K+
Sbjct: 241 ATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELD-AIGTK-RFDSEKSG- 297
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPG 389
D V Q T+ +LN +DG +SS D+R+ ++ TN D LDPA LR G
Sbjct: 298 --DREV-----------QRTMLELLNQLDG-FSS--DDRVKVLAATNRVDVLDPALLRSG 341
Query: 390 RMD 392
R+D
Sbjct: 342 RLD 344
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 79/262 (30%), Positives = 115/262 (43%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVG-KAWKRGYLLYGPPGTGKSSLIAAMANY 276
F +A + K IM+ + F+K + Y+++G K K+G +L GPPGTGK+ L A A
Sbjct: 98 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGE 156
Query: 277 LNFDVYD------LELTNLRGNMELRNLL-IATENKS-ILVVEDIDCSIELQDRFAKAKA 328
N LE+ G +R+L +A +N IL +++ID A +
Sbjct: 157 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID---------AVGRK 207
Query: 329 TNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRP 388
+ N TL+ +L +DG ++ +I+ TN D LDPA LRP
Sbjct: 208 RGRGNFGGQSEQEN-------TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRP 258
Query: 389 GRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP----ADVAEQLM 443
GR D I + G + +L + LE E L K A +TP ADVA +
Sbjct: 259 GRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVAN--V 316
Query: 444 RNEVPEIALRELIQFLEIKRRE 465
NE IA R L + K E
Sbjct: 317 CNEAALIAARHLSDSINQKHFE 338
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 64/264 (24%), Positives = 111/264 (42%)
Query: 215 PATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
P +FD + ++K+ + +++ ++ Y ++G +G LL G PGTGK+ L A+A
Sbjct: 296 PTSFDDVKGIQEVKEEL-EEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIA 354
Query: 275 N-------YLNFDVYDLELTNLRGNMELRNLLIATENKS--ILVVEDIDCSIELQDRFAK 325
Y +D + + G+ +R L A K I+ +++ID A
Sbjct: 355 GEAGVSFLYTTGSSFDEKYVGV-GSRRVRELFNAAREKQPCIIFIDEID---------AV 404
Query: 326 AKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAF 385
K+ N N TL +L +DG + + +II TN + LDPA
Sbjct: 405 GKSRNTAHHNE-------------TLLQLLTEMDGFEGN--SQIMIIGATNAPNSLDPAL 449
Query: 386 LRPGRMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAK-VTPADVAEQLMR 444
LRPGR D HI + G + YL +H + ++ + + T AD++ +
Sbjct: 450 LRPGRFDRHISVPIPDMKGRSEIIDHYLKKVKHTVEVKADTIARATPGFTGADLSNLINT 509
Query: 445 NEVPEIAL-RELIQFLEIKRRESD 467
+ + +E I +I D
Sbjct: 510 AAIKAVQNGKETISIKQIDDARDD 533
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 55/190 (28%), Positives = 90/190 (47%)
Query: 210 VNLDHPAT-FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSS 268
VN + P F +A + K+ + + ++ F+K E Y +G +G LL GPPGTGK+
Sbjct: 168 VNSEKPKVKFSDVAGVEEAKEEVKEIVD-FLKYPERYIKLGAKIPKGLLLVGPPGTGKTL 226
Query: 269 LIAAMANYLNFDVYD------LELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDR 322
L A+A + + +E+ G +R+L + ++ +V ID E+ D
Sbjct: 227 LAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVF-ID---EI-DA 281
Query: 323 FAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLD 382
K++A + M M N + TL+ +L +DG + I++ TN + LD
Sbjct: 282 IGKSRAASGM--------MGGNDEREQTLNQLLAEMDGFGTESSPV-IVLAATNRPEVLD 332
Query: 383 PAFLRPGRMD 392
A LRPGR D
Sbjct: 333 AALLRPGRFD 342
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 142 (55.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 55/186 (29%), Positives = 87/186 (46%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
+D + + K ++ D L+ ++ E + G + G LLYGPPGTGK+ L A+A L
Sbjct: 654 WDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATEL 712
Query: 278 NFDVYDL---ELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNA 331
+ + + EL N+ G E +RN+ N S V+ D EL D A + ++
Sbjct: 713 SLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIF-FD---EL-DSIAPHRGNSS 767
Query: 332 MDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRM 391
NV+ V+ S +L +D + +I TN D LDP+ LRPGR
Sbjct: 768 DSGNVMDRVV----------SQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRF 817
Query: 392 DVHIHM 397
D +++
Sbjct: 818 DKLVYL 823
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 136 (52.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 47/164 (28%), Positives = 78/164 (47%)
Query: 239 VKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNL 298
+K+ E Y VG A G L++GPPG GK+ L A+AN + +++G EL N
Sbjct: 542 IKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRAN-----FISIKGP-ELLNK 595
Query: 299 LIATENKSIL-VVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNF 357
+ K++ V + S F + +D V + ++++ ++ +L
Sbjct: 596 YVGESEKAVRQVFQRARASTPCIIFF------DELDALVPRRDTSMSESSSRVVNTLLTE 649
Query: 358 IDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCT 401
+DGL G +I TN D +DPA LRPGR+D +++ T
Sbjct: 650 LDGLNDRKGV--FVIGATNRPDMIDPAMLRPGRLDKTLYIELPT 691
Score = 51 (23.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 92 KRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVP 134
+ I +N+PN+E +IS + I + NG +R SK P
Sbjct: 359 REICLNVPNEEQRISILKAMTKNI-KLENGEHFNYRELSKLTP 400
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 136 (52.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 47/164 (28%), Positives = 78/164 (47%)
Query: 239 VKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNL 298
+K+ E Y VG A G L++GPPG GK+ L A+AN + +++G EL N
Sbjct: 542 IKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRAN-----FISIKGP-ELLNK 595
Query: 299 LIATENKSIL-VVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNF 357
+ K++ V + S F + +D V + ++++ ++ +L
Sbjct: 596 YVGESEKAVRQVFQRARASTPCIIFF------DELDALVPRRDTSMSESSSRVVNTLLTE 649
Query: 358 IDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCT 401
+DGL G +I TN D +DPA LRPGR+D +++ T
Sbjct: 650 LDGLNDRKGV--FVIGATNRPDMIDPAMLRPGRLDKTLYIELPT 691
Score = 51 (23.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 92 KRIKINLPNKETKISCSVEKDEEIVDVFNGVQLKWRFSSKQVP 134
+ I +N+PN+E +IS + I + NG +R SK P
Sbjct: 359 REICLNVPNEEQRISILKAMTKNI-KLENGEHFNYRELSKLTP 400
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 68/248 (27%), Positives = 115/248 (46%)
Query: 226 DMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVY 282
++KQ + + ++ V E + G + RG L YGPPGTGK+ L A+AN NF V
Sbjct: 503 EVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 562
Query: 283 DLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQP 339
EL ++ G E +R++ + +V +D EL D AKA+ + D
Sbjct: 563 GPELLSMWFGESESNIRDIFDKARAAAPCIVF-LD---EL-DSIAKARGGSVGDAGGASD 617
Query: 340 VMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSY 399
+ +NQ +L +DG+ S +I TN ++LDPA RPGR+D I++
Sbjct: 618 RV-VNQ--------LLTEMDGMTSK--KNVFVIGATNRPEQLDPALCRPGRLDSLIYVPL 666
Query: 400 CTSCGFKMLASSYLGITEHPLFLEVEGLIEKAK-VTPADVAEQLMRNEVPEIALRELIQF 458
G + + L T ++++ + K + AD+ + +IA++E I
Sbjct: 667 PDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLG--FITQRAVKIAIKESIT- 723
Query: 459 LEIKRRES 466
+I R ++
Sbjct: 724 ADINRTKA 731
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 51/175 (29%), Positives = 83/175 (47%)
Query: 228 KQM--IMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVY 282
KQM I + +E ++ + ++++G RG LLYGPPGTGK+ + A+AN F +
Sbjct: 229 KQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLIN 288
Query: 283 DLEL-TNLRGNME--LRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
E+ + + G E LR E S I+ +++ID SI K + TN
Sbjct: 289 GPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEID-SIA-----PKREKTNG------ 336
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMD 392
+V + +S +L +DG+ +++ TN + +DPA R GR D
Sbjct: 337 -------EVERRVVSQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRFD 382
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 141 (54.7 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 57/213 (26%), Positives = 97/213 (45%)
Query: 193 TLRYDR-MHGMRGDVWQSVNLDHPAT--FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVG 249
TL + + + G +SVNL P +D + +++Q++MD ++ K E + N+
Sbjct: 489 TLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLP 548
Query: 250 KAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILV 309
+ G LLYGPPGTGK+ L +A + +++G L + A+E
Sbjct: 549 IRQRTGILLYGPPGTGKTLLAGVIARESR-----MNFISVKGPELLSKYIGASEQ----A 599
Query: 310 VEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQ--VPQVTLSGMLNFIDGLWSSCGD 367
V DI ++ + AK + I P + V ++ +L +DG+ G
Sbjct: 600 VRDIF----IRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGV 655
Query: 368 ERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYC 400
++ T+ D +DPA LRPGR+D + YC
Sbjct: 656 --YVLAATSRPDLIDPALLRPGRLDKCV---YC 683
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 141 (54.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 65/225 (28%), Positives = 102/225 (45%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+D + +K I+D ++ +K E + + G + G L YGPPGTGK+ + A+A
Sbjct: 730 TWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIAT- 787
Query: 277 LNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
NF L +++G EL N+ I ++ V + R AK +++
Sbjct: 788 -NFS---LNFFSVKGP-ELLNMYIGESEANVRRVFQ-------KAREAKPCVIFFDEIDS 835
Query: 337 IQPVMNLNQ-----VPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRM 391
+ P NQ V +S +L +DG+ S+ D +I TN D LD A LRPGR
Sbjct: 836 VAPKRG-NQGDSGGVMDRIVSQLLAELDGM-STDADGVFVIGATNRPDLLDEALLRPGRF 893
Query: 392 DVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVE-GLIEKAKVTP 435
D +++ K L + L L+ + LIE AK+ P
Sbjct: 894 DKLLYLGI-PDTDTKQL--NILEALTRKFVLDNDVKLIELAKLCP 935
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 57/179 (31%), Positives = 89/179 (49%)
Query: 235 LERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLNFDVYDLELTNL 289
+E +K E + VG +G LLYGPPGTGK+ L A+A N++ F +
Sbjct: 188 IELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFI-FSPASAIVDKY 246
Query: 290 RGNME--LRNLLI-ATENKS-ILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQ 345
G +R + A E++ I+ ++++D +I + RF++ T+A D +
Sbjct: 247 IGESARLIREMFAYAKEHEPCIIFMDEVD-AIGGR-RFSEG--TSA-DREI--------- 292
Query: 346 VPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCG 404
Q TL +LN +DG + + G +II+ TN D LDPA LR GR+D I + G
Sbjct: 293 --QRTLMELLNQMDG-FDTLGQTKIIM-ATNRPDTLDPALLRAGRLDRKIEIGLPNEAG 347
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 69/248 (27%), Positives = 115/248 (46%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D ++S +++ I + +E + E Y +G +G +LYG PGTGK+ L A+AN +
Sbjct: 192 DIGGLESQIQE-IKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 250
Query: 279 ---FDVYDLELTNLR---GNMELRNLLIATE--NKSILVVEDIDCSIELQDRFAKAKATN 330
V EL G +R L A E + SI+ +++ID A T
Sbjct: 251 ATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEID-----------AIGTK 299
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + Q T+ +LN +DG +S D ++I+ T D LDPA +RPGR
Sbjct: 300 RYDAQ-----SGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISD-LDPALIRPGR 353
Query: 391 MDVHI---HMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIE-KAKVTPADVAEQLMRNE 446
+D I + T + +S + + E + +E LI+ K ++ A++ + + +E
Sbjct: 354 IDRKILFENPDEATKRKIFTIHTSKMNLGED---VNLEELIQCKDDLSGAEI--KAIVSE 408
Query: 447 VPEIALRE 454
+ALRE
Sbjct: 409 AGLLALRE 416
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 135 (52.6 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 54/186 (29%), Positives = 86/186 (46%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN-- 275
F +A + KQ IM+ + F+K + Y ++G +G LL GPPGTGK+ L A A
Sbjct: 321 FKDVAGCDEAKQEIMEFVH-FLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 379
Query: 276 ---YLNFDVYD-LELTNLRGNMELRNLLIATENK--SILVVEDIDCSIELQDRFAKAKAT 329
+L+ D +E+ G +R+L SI+ +++ID +A+
Sbjct: 380 GVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDA-------IGRARGR 432
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N + TL+ +L +DG ++ G +++ TN D LD A LRPG
Sbjct: 433 GGL---------GGNDERESTLNQLLVEMDGFGTTAGV--VVLAGTNRPDILDKALLRPG 481
Query: 390 RMDVHI 395
R D I
Sbjct: 482 RFDRQI 487
Score = 48 (22.0 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 427 LIEKAKVTPADVAEQLMRNEV 447
L+E+ KV A++AE L+ EV
Sbjct: 727 LVEEHKVKVAEIAELLLEKEV 747
Score = 42 (19.8 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 66 YDDGLNQNVLFKAAK-LYLEPRIPPYVKRIKINLPNKET-KISC-SVEKDEEIVDVFNG 121
+ G Q + F+ K LEP + + I++ NK K+ S KD++ DV +G
Sbjct: 151 FGSGEQQQISFQEFKNKLLEPGLVDH-----IDVSNKSVAKVYVRSTPKDQQTTDVVHG 204
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 139 (54.0 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 74/261 (28%), Positives = 115/261 (44%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K IM+ + F+K + Y+++G +G +L GPPGTGK+ L A A
Sbjct: 302 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 360
Query: 278 N--FDVYD----LELTNLRGNMELRNLLI-ATENKS-ILVVEDIDCSIELQDRFAKAKAT 329
N F + LE+ G +R+L + A +N IL +++ID A +
Sbjct: 361 NVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEID---------AVGRKR 411
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N TL+ +L +DG + +++ TN D LDPA +RPG
Sbjct: 412 GRGNFGGQSEQEN-------TLNQLLVEMDGF--NTATNVVVLAGTNRPDILDPALMRPG 462
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP----ADVAEQLMR 444
R D I++ G + +L + L+ E L K A +TP AD+A +
Sbjct: 463 RFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIAN--VC 520
Query: 445 NEVPEIALRELIQFLEIKRRE 465
NE IA R L + K E
Sbjct: 521 NEAALIAARHLSDAINQKHFE 541
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 77/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + D ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 589
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 590 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 639 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LEFLAKMTNGFSGADLTEICQR-- 693
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 694 ACKLAIRESIES-EIRRERE 712
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 141 (54.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 57/213 (26%), Positives = 97/213 (45%)
Query: 193 TLRYDR-MHGMRGDVWQSVNLDHPAT--FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVG 249
TL + + + G +SVNL P +D + +++Q++MD ++ K E + N+
Sbjct: 811 TLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLP 870
Query: 250 KAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILV 309
+ G LLYGPPGTGK+ L +A + +++G L + A+E
Sbjct: 871 IRQRTGILLYGPPGTGKTLLAGVIARESR-----MNFISVKGPELLSKYIGASEQ----A 921
Query: 310 VEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQ--VPQVTLSGMLNFIDGLWSSCGD 367
V DI ++ + AK + I P + V ++ +L +DG+ G
Sbjct: 922 VRDIF----IRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGV 977
Query: 368 ERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYC 400
++ T+ D +DPA LRPGR+D + YC
Sbjct: 978 --YVLAATSRPDLIDPALLRPGRLDKCV---YC 1005
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 135 (52.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 54/183 (29%), Positives = 87/183 (47%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + D + + + +E + E Y N+G +G LLYGPPGTGK+ A+AN
Sbjct: 175 TYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANR 234
Query: 277 LN---FDVYDLELTNL---RGNMELRNLL-IATENKSILVVEDIDCSIELQDRFAKAKAT 329
+ V EL G +R L +A K+ L+ D E+ D A+
Sbjct: 235 TDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD-----EI-DAVGGARFD 288
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ + N+V Q T+ ++N +DG + G+ ++++ TN D LDPA +RPG
Sbjct: 289 DGQGGD--------NEV-QRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPG 337
Query: 390 RMD 392
R+D
Sbjct: 338 RLD 340
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 135 (52.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 54/183 (29%), Positives = 87/183 (47%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+ + D + + + +E + E Y N+G +G LLYGPPGTGK+ A+AN
Sbjct: 175 TYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANR 234
Query: 277 LN---FDVYDLELTNL---RGNMELRNLL-IATENKSILVVEDIDCSIELQDRFAKAKAT 329
+ V EL G +R L +A K+ L+ D E+ D A+
Sbjct: 235 TDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFD-----EI-DAVGGARFD 288
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ + N+V Q T+ ++N +DG + G+ ++++ TN D LDPA +RPG
Sbjct: 289 DGQGGD--------NEV-QRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPG 337
Query: 390 RMD 392
R+D
Sbjct: 338 RLD 340
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 138 (53.6 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 58/204 (28%), Positives = 101/204 (49%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN-- 275
F +A S+ KQ + + ++ ++K E Y+ +G RG LL GPPG GK+ L A+A
Sbjct: 340 FRDVAGLSEAKQEVKEFVD-YLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEA 398
Query: 276 ---YLNFDVYD-LELTNLRGNMELRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKAT 329
+L+ + + +E+ G +R+L + ++ I+ +++ID +I Q T
Sbjct: 399 QVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEID-AIGRQ-----RSGT 452
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+M + + Q TL+ +L +DG+ + G +++ +TN D LD A LRPG
Sbjct: 453 ESMGQG------SSGESEQ-TLNQLLVEMDGMATKEGV--LMLASTNRADILDKALLRPG 503
Query: 390 RMDVHIHMSYCTSCGFKMLASSYL 413
R D HI + T K + +L
Sbjct: 504 RFDRHILIDLPTLAERKEIFEKHL 527
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 137 (53.3 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 50/174 (28%), Positives = 77/174 (44%)
Query: 232 MDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLR- 290
++++ F++ + +G RG LL GPPGTGK+ L A+A N + + +
Sbjct: 279 LEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDE 338
Query: 291 -----GNMELRNLLIATENK--SILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNL 343
G +R L A + SI+ ++++D A + NA D ++ L
Sbjct: 339 MYVGVGAKRVRELFAAARKQAPSIIFIDELD---------AIGQKRNARDAAHMR--QTL 387
Query: 344 NQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
NQ+ V L G D + I TN + LDPA RPGR D HIH+
Sbjct: 388 NQL-LVDLDGFSKNED-----LAHPVVFIGATNFPESLDPALTRPGRFDRHIHV 435
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 136 (52.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 46/156 (29%), Positives = 72/156 (46%)
Query: 246 RNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENK 305
R +G W RG LLYGPPGTGK+SL+ A+ D L L + R A E++
Sbjct: 49 RTLGLKWPRGLLLYGPPGTGKTSLVRAVVQEC-----DAHLIVLSPHSVHR--AHAGESE 101
Query: 306 SILVVEDIDCSIE-LQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGML-NFIDGLWS 363
+L + S + D K +++V+ P + + V ++ L +D
Sbjct: 102 KVLREAFAEASSHAVSD---KPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMDSNKP 158
Query: 364 SCGDERIIIF-TTNHKDRLDPAFLRPGRMDVHIHMS 398
S R+++ +TN D +DPA R GR D + +S
Sbjct: 159 SSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVS 194
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 52/193 (26%), Positives = 87/193 (45%)
Query: 208 QSVNLDHP-ATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGK 266
+ + ++ P T+D + D+K+ + +E +K + +G + RG LL+GPPG K
Sbjct: 274 RGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSK 333
Query: 267 SSLIAAMANYLNFDVYDLELTNLRGNM--ELRNLLIATENKSILVVEDIDCSIELQDRFA 324
++L A AN + L L E LL T ++ L SI D A
Sbjct: 334 TTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASP----SIIFFDE-A 388
Query: 325 KAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPA 384
A D + N + V + LS +L +DGL + G +++ TN +D A
Sbjct: 389 DVVACKRGD----ESSSNSSTVGERLLSTLLTEMDGLEEAKGI--LVLAATNRPYAIDAA 442
Query: 385 FLRPGRMDVHIHM 397
+RPGR D+ +++
Sbjct: 443 LMRPGRFDLVLYV 455
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 138 (53.6 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 56/217 (25%), Positives = 105/217 (48%)
Query: 208 QSVNLDHPATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGK 266
+++NL+ F ++ +D +KQ I + ++ + + ++ G +G LLYGPPGTGK
Sbjct: 305 KNINLN----FQSIGGLDLQVKQ-IRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGK 359
Query: 267 SSLIAAMANYLNFDVYDLE----LTNLRGNME--LRNLL--IATENKSILVVEDIDCSI- 317
+ L +A N ++ + L G E L+ + A ++ SI+ ++++D
Sbjct: 360 TLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCP 419
Query: 318 ELQDRFAKA-KATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTN 376
+ +D ++ K L ++ V++ + Q G N +G + GD+ I+I TN
Sbjct: 420 KREDNSSEVEKRIVGSLLTLMDGVVSTSD--QNDGGGGDNG-NGNGNCGGDKVIVIGCTN 476
Query: 377 HKDRLDPAFLRPGRMDVHIHMSYCTSCGFKMLASSYL 413
D +D A RPGR D I +S G + + + +L
Sbjct: 477 RPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFL 513
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 136 (52.9 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 67/243 (27%), Positives = 116/243 (47%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TFD +A + K+ +++ ++ F+K ++ + +G +G LL G PGTGK+ L A+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 277 LNFDVYDLELTNLRGNMELRNLLIATENKSILVV--EDIDCSIELQDRFAKAKATNAMDL 334
N + + ++ +E+ + A+ + + + C I + + A + + L
Sbjct: 215 ANVPFFSISGSDF---VEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRH-RGIGL 270
Query: 335 NVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVH 394
N + TL+ +L +DG S+ G +II TN D LDPA LRPGR D
Sbjct: 271 G------GGNDEREQTLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQ 322
Query: 395 IHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNEVPEI 450
+ +S G + + + + + PL +V+ L A+ TP AD+A + NE I
Sbjct: 323 VTISIPDINGREKIIAVHA--KKVPLAPDVD-LRVIARGTPGFSGADLANLV--NEAALI 377
Query: 451 ALR 453
A R
Sbjct: 378 AAR 380
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 136 (52.9 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 67/243 (27%), Positives = 116/243 (47%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
TFD +A + K+ +++ ++ F+K ++ + +G +G LL G PGTGK+ L A+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 277 LNFDVYDLELTNLRGNMELRNLLIATENKSILVV--EDIDCSIELQDRFAKAKATNAMDL 334
N + + ++ +E+ + A+ + + + C I + + A + + L
Sbjct: 215 ANVPFFSISGSDF---VEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRH-RGIGL 270
Query: 335 NVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVH 394
N + TL+ +L +DG S+ G +II TN D LDPA LRPGR D
Sbjct: 271 G------GGNDEREQTLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQ 322
Query: 395 IHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNEVPEI 450
+ +S G + + + + + PL +V+ L A+ TP AD+A + NE I
Sbjct: 323 VTISIPDINGREKIIAVHA--KKVPLAPDVD-LRVIARGTPGFSGADLANLV--NEAALI 377
Query: 451 ALR 453
A R
Sbjct: 378 AAR 380
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 140 (54.3 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 55/190 (28%), Positives = 89/190 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANY 276
T+D + ++K +M+ ++ ++R E + G + G L YGPPGTGK+ L A+A
Sbjct: 994 TWDDVGGLGNVKDAVMETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATE 1052
Query: 277 LNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNV 336
Y L +++G EL N+ I ++ V + R A+ +L+
Sbjct: 1053 -----YSLNFFSVKGP-ELLNMYIGESEANVRRVFQ-------RARDARPCVVFFDELDS 1099
Query: 337 IQPVMNLNQ-----VPQVTLSGMLNFIDGLWSSCGDER----IIIFTTNHKDRLDPAFLR 387
+ P NQ V +S +L +DG+ S GD+ +I TN D LD A LR
Sbjct: 1100 VAPKRG-NQGDSGGVMDRIVSQLLAELDGM--SSGDDSGGGVFVIGATNRPDLLDQALLR 1156
Query: 388 PGRMDVHIHM 397
PGR D +++
Sbjct: 1157 PGRFDKLLYL 1166
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 136 (52.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 56/183 (30%), Positives = 84/183 (45%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
FD +A + K+ + + + F+K+ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 171 FDDVAGIDEAKEELQE-VVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 278 N---FDVYDLELTNLR---GNMELRNLLI-ATENKSILV-VEDIDCSIELQDRFAKAKAT 329
F + E + G +R+L A EN L+ +++ID A +
Sbjct: 230 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEID---------AVGRQR 280
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
A + N + TL+ +L +DG + G III TN D LD A +RPG
Sbjct: 281 GA-------GIGGGNDEREQTLNQLLTEMDGFEGNTGI--IIIAATNRPDVLDSALMRPG 331
Query: 390 RMD 392
R D
Sbjct: 332 RFD 334
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 133 (51.9 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 60/185 (32%), Positives = 93/185 (50%)
Query: 243 EFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL--NF-DVYDLELTNLR-GNME--LR 296
E + VG +G LLYGPPGTGK+ L A+A+ L NF V + + G +R
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIR 220
Query: 297 NLL-IATENKS-ILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGM 354
+ A +++ ++ +++ID +I + RF++ T+A D + Q TL +
Sbjct: 221 EMFGYARDHQPCVIFMDEID-AIGGR-RFSEG--TSA-DREI-----------QRTLMEL 264
Query: 355 LNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSCG-FKMLASSYL 413
LN +DG + + +II+ TN D LDPA LRPGR+D I + G +L
Sbjct: 265 LNQMDG-FDTLSKVKIIM-ATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAA 322
Query: 414 GITEH 418
IT+H
Sbjct: 323 NITKH 327
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 136 (52.9 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 74/261 (28%), Positives = 115/261 (44%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K IM+ + F+K + Y ++G +G +L GPPGTGK+ L A A
Sbjct: 151 FKDVAGCEEAKLEIMEFVN-FLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 209
Query: 278 N--FDVYD----LELTNLRGNMELRNLL-IATENKS-ILVVEDIDCSIELQDRFAKAKAT 329
N F + LE+ G +R+L +A +N IL +++ID A +
Sbjct: 210 NVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID---------AVGRKR 260
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N TL+ +L +DG ++ +I+ TN D LDPA +RPG
Sbjct: 261 GRGNFGGQSEQEN-------TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPG 311
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP----ADVAEQLMR 444
R D I++ G + +L + L+ + L K A +TP AD+A +
Sbjct: 312 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIAN--VC 369
Query: 445 NEVPEIALRELIQFLEIKRRE 465
NE IA R L + K E
Sbjct: 370 NEAALIAARHLSDAINQKHFE 390
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 137 (53.3 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 50/179 (27%), Positives = 85/179 (47%)
Query: 229 QMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDL---E 285
+M + + ++K + Y +G +G LL GPPG GK+ L A+A + E
Sbjct: 291 KMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGSE 350
Query: 286 LTNLRGNM---ELRNLLIATENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMN 342
+ G + +R+L + ++ +V ID E+ D K ++TN
Sbjct: 351 FVEVIGGLGAARVRSLFREAQARAPCIVY-ID---EI-DAVGKKRSTNVSGF-------- 397
Query: 343 LNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCT 401
N + TL+ +L +DG+ ++ D I++ +TN D LD A +RPGR+D HI + T
Sbjct: 398 ANAEEEQTLNQLLVEMDGMGTT--DHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPT 454
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 135 (52.6 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 207 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 266
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 267 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 321
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 322 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 370
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 371 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LDFLAKMTNGFSGADLTEICQR-- 425
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 426 ACKLAIRESIES-EIRRERE 444
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 589
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 590 VGDGGGAADRV-INQI--------LTEMDGMSSK--KNVFIIGATNRPDIIDPAILRPGR 638
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 639 LDQLIYIPLPDEKS--RIAILKANLRKSPISKDVD-LDFLAKMTNGFSGADLTEICQR-- 693
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 694 ACKLAIRESIEN-EIRRERE 712
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 67/282 (23%), Positives = 131/282 (46%)
Query: 192 FTLRYDRMHGMRGDVWQSVNLDHPATFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKA 251
F + D++H + + + D + ++K+ I+D ++ ++ E ++G
Sbjct: 379 FNVALDQLHDAHSQAVGAPKIPSVSWQDVGGLH-EVKKEILDTIQLPLEHPELL-SLGLC 436
Query: 252 WKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVE 311
+ G LLYGPPGTGK+ L A+A + +++G EL N+ + +++ V
Sbjct: 437 -RSGLLLYGPPGTGKTLLAKAVATTCT-----MTFLSVKGP-ELINMYVGQSEENVRNV- 488
Query: 312 DIDCSIELQDRFAKAKATNAM-----DLNVIQPVMNLNQ----VPQVTLSGMLNFIDGLW 362
FA+A+A +L+ + P + V +S +L +DGL
Sbjct: 489 -----------FARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLH 537
Query: 363 SSCGDERIIIFTTNHKDRLDPAFLRPGRMD--VHIHMSYCTSCGFKMLASSYLGITEHPL 420
SS E +I TN D LDPA LRPGR D V++ ++ ++L++ P
Sbjct: 538 SS--REVFVIGATNRPDLLDPALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFKLDPS 595
Query: 421 FLEVEGLIEK--AKVTPADVAEQLMRNEVPEIALRELIQFLE 460
+ + ++E+ A++T AD+ + ++ A++ ++++E
Sbjct: 596 -VNLSSILEECPAQLTGADIYS--LCSDAMMCAVKRKVEWIE 634
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/158 (29%), Positives = 72/158 (45%)
Query: 242 KEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIA 301
KE + +G +G L++GPPGTGK+ L A A+ N L G +L + I
Sbjct: 209 KEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTN-----ATFLKLAGP-QLVQMFIG 262
Query: 302 TENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGL 361
K +V + + + E +A+ ++ ++ Q T+ +LN +DG
Sbjct: 263 DGAK--MVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGF 320
Query: 362 WSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSY 399
S D +I TN D LDPA LR GR+D I + +
Sbjct: 321 --STDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPH 356
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/158 (29%), Positives = 72/158 (45%)
Query: 242 KEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIA 301
KE + +G +G L++GPPGTGK+ L A A+ N L G +L + I
Sbjct: 209 KEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTN-----ATFLKLAGP-QLVQMFIG 262
Query: 302 TENKSILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGL 361
K +V + + + E +A+ ++ ++ Q T+ +LN +DG
Sbjct: 263 DGAK--MVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGF 320
Query: 362 WSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSY 399
S D +I TN D LDPA LR GR+D I + +
Sbjct: 321 --STDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPH 356
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 52/182 (28%), Positives = 93/182 (51%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D ++S +++ + + +E + E Y +G +G +LYG PGTGK+ L A+AN +
Sbjct: 205 DIGGLESQIQE-VRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 263
Query: 279 ---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
+ EL G +R + +A E+ SI+ +++ID +I + R+ +T+
Sbjct: 264 ATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEID-AIGTK-RY---DSTS 318
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
+ + Q T+ +LN +DG + GD ++I+ TN + LDPA +RPGR
Sbjct: 319 GGEREI-----------QRTMLELLNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGR 365
Query: 391 MD 392
+D
Sbjct: 366 ID 367
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 55/183 (30%), Positives = 90/183 (49%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D +D +++ I++ + +K E ++ +G +G L+YGPPGTGK+ L A A N
Sbjct: 212 DIGGLDKQIEE-IVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETN 270
Query: 279 FDVYDL---ELTNL---RGNMELRNLLIATENK--SILVVEDIDCSIELQDRFAKAKATN 330
L +L + G +R+ + K SI+ ++++D ++ + RF K+
Sbjct: 271 ATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELD-AVGTK-RFDSEKSG- 327
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPG 389
D V Q T+ +LN +DG S D+RI ++ TN D LDPA LR G
Sbjct: 328 --DREV-----------QRTMLELLNQLDGFAS---DDRIKVLAATNRVDVLDPALLRSG 371
Query: 390 RMD 392
R+D
Sbjct: 372 RLD 374
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/182 (29%), Positives = 94/182 (51%)
Query: 219 DTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 278
D ++S +++ I + +E + E Y +G +G +LYG PGTGK+ L A+AN +
Sbjct: 187 DIGGLESQIQE-IKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 245
Query: 279 ---FDVYDLELTN--LRGNMEL-RNLL-IATENK-SILVVEDIDCSIELQDRFAKAKATN 330
+ EL L L R + IA ++ SI+ +++ID +I + R+ ++T+
Sbjct: 246 ATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEID-AIGTK-RY---ESTS 300
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
+ + Q T+ +LN +DG + GD ++I+ TN + LDPA +RPGR
Sbjct: 301 GGEREI-----------QRTMLELLNQLDG-FDDRGDIKVIM-ATNKIESLDPALIRPGR 347
Query: 391 MD 392
+D
Sbjct: 348 ID 349
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 66/244 (27%), Positives = 104/244 (42%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K+ IM+ + +F++ Y +G RG +L GPPGTGK+ L A A
Sbjct: 286 FKDVAGCDESKEEIMEFV-KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 344
Query: 278 N---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKAT 329
V E + G +R+L A E +I+ V++ID K +
Sbjct: 345 GVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDA-------IGKERGN 397
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
M N + TL+ +L +DG ++ D +++ TN D LD A LRPG
Sbjct: 398 GRM---------GGNDERENTLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPG 446
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRNEVPE 449
R D HI + G K + +L + V+ + K K +QL E+ +
Sbjct: 447 RFDRHISIDVPDVEGRKQIFKVHLNKLK---LKSVQDIDAKQKDVDFSKYQQLKNEEIEK 503
Query: 450 IALR 453
+A R
Sbjct: 504 LAGR 507
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 66/244 (27%), Positives = 104/244 (42%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K+ IM+ + +F++ Y +G RG +L GPPGTGK+ L A A
Sbjct: 286 FKDVAGCDESKEEIMEFV-KFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 344
Query: 278 N---FDVYDLELTNLR---GNMELRNLL-IATENK-SILVVEDIDCSIELQDRFAKAKAT 329
V E + G +R+L A E +I+ V++ID K +
Sbjct: 345 GVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDA-------IGKERGN 397
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
M N + TL+ +L +DG ++ D +++ TN D LD A LRPG
Sbjct: 398 GRM---------GGNDERENTLNQLLVEMDGFDTT--DHVVVLAGTNRPDILDKALLRPG 446
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTPADVAEQLMRNEVPE 449
R D HI + G K + +L + V+ + K K +QL E+ +
Sbjct: 447 RFDRHISIDVPDVEGRKQIFKVHLNKLK---LKSVQDIDAKQKDVDFSKYQQLKNEEIEK 503
Query: 450 IALR 453
+A R
Sbjct: 504 LAGR 507
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 74/261 (28%), Positives = 115/261 (44%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K IM+ + F+K + Y ++G +G +L GPPGTGK+ L A A
Sbjct: 307 FKDVAGCEEAKLEIMEFVN-FLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 365
Query: 278 N--FDVYD----LELTNLRGNMELRNLL-IATENKS-ILVVEDIDCSIELQDRFAKAKAT 329
N F + LE+ G +R+L +A +N IL +++ID A +
Sbjct: 366 NVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID---------AVGRKR 416
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N TL+ +L +DG ++ +I+ TN D LDPA +RPG
Sbjct: 417 GRGNFGGQSEQEN-------TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPG 467
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP----ADVAEQLMR 444
R D I++ G + +L + L+ + L K A +TP AD+A +
Sbjct: 468 RFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIAN--VC 525
Query: 445 NEVPEIALRELIQFLEIKRRE 465
NE IA R L + K E
Sbjct: 526 NEAALIAARHLSDAINQKHFE 546
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 76/261 (29%), Positives = 113/261 (43%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K IM+ + F+K + Y+++G +G +L GPPGTGK+ L A A
Sbjct: 308 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 366
Query: 278 NFDVYD------LELTNLRGNMELRNLL-IATENKS-ILVVEDIDCSIELQDRFAKAKAT 329
N LE+ G +R+L +A +N IL +++ID A +
Sbjct: 367 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID---------AVGRKR 417
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N TL+ +L +DG ++ +I+ TN D LDPA +RPG
Sbjct: 418 GRGNFGGQSEQEN-------TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPG 468
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP----ADVAEQLMR 444
R D I + G + +L + LE E L K A +TP ADVA +
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVAN--VC 526
Query: 445 NEVPEIALRELIQFLEIKRRE 465
NE IA R L + K E
Sbjct: 527 NEAALIAARHLSDSINQKHFE 547
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 73/258 (28%), Positives = 117/258 (45%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 589
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 590 IGDGGGAADRV-INQI--------LTEMDGM--SIKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAK-VTPADVAEQLMRNEVPE 449
+D I++ + + L + ++V+ L + + AD+ E R +
Sbjct: 639 LDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQR--ACK 696
Query: 450 IALRELIQFLEIKRRESD 467
+A+RE I+ EI RRE D
Sbjct: 697 LAIRESIEN-EI-RRERD 712
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 76/261 (29%), Positives = 113/261 (43%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K IM+ + F+K + Y+++G +G +L GPPGTGK+ L A A
Sbjct: 308 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 366
Query: 278 NFDVYD------LELTNLRGNMELRNLL-IATENKS-ILVVEDIDCSIELQDRFAKAKAT 329
N LE+ G +R+L +A +N IL +++ID A +
Sbjct: 367 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID---------AVGRKR 417
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N TL+ +L +DG ++ +I+ TN D LDPA +RPG
Sbjct: 418 GRGNFGGQSEQEN-------TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALMRPG 468
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP----ADVAEQLMR 444
R D I + G + +L + LE E L K A +TP ADVA +
Sbjct: 469 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVAN--VC 526
Query: 445 NEVPEIALRELIQFLEIKRRE 465
NE IA R L + K E
Sbjct: 527 NEAALIAARHLSDSINQKHFE 547
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 55/197 (27%), Positives = 91/197 (46%)
Query: 208 QSVNLDHPAT--FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTG 265
++VNL P +D + +++Q++MD ++ K E + N+ + G LLYGPPGTG
Sbjct: 830 RNVNLHKPRDLGWDHIGGLREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTG 889
Query: 266 KSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAK 325
K+ L +A + L LR EL + I ++ V DI ++ + AK
Sbjct: 890 KTLLAGVVARESG-----MILLVLRYGPELLSKYIGASEQA---VRDIF----IRAQAAK 937
Query: 326 AKATNAMDLNVIQPVMNLNQ--VPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDP 383
+ I P + V ++ +L +DG+ G ++ T+ D +DP
Sbjct: 938 PCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGV--YVLAATSRPDLIDP 995
Query: 384 AFLRPGRMDVHIHMSYC 400
A LRPGR+D + YC
Sbjct: 996 ALLRPGRLDKCV---YC 1009
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 42/114 (36%), Positives = 56/114 (49%)
Query: 344 NQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHMSYCTSC 403
N + TL+ +L +DG ++ G III TN D LDPA LRPGR D I +S
Sbjct: 273 NDEREQTLNQLLVEMDGFEANEGV--IIIAATNRPDVLDPALLRPGRFDRQITISIPDIA 330
Query: 404 GFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNEVPEIALR 453
G + + +L + P VE I A+ TP AD+A + NE IA R
Sbjct: 331 GRQKILEVHL--KKIPTAPNVEVSII-ARGTPGFSGADLANLV--NESALIAAR 379
Score = 86 (35.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
TF +A + K+ + + +E F++ + ++ +G +G LL GPPGTGK+ L A+A
Sbjct: 155 TFHDVAGIDEAKEELAEIVE-FLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIA 211
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 53/163 (32%), Positives = 81/163 (49%)
Query: 239 VKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDVYDLELTNL------RGN 292
+++ + +R +G +G L++GPPGTGK+ L A A N L L G
Sbjct: 205 MQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGA 264
Query: 293 MELRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKATNAMDLNVIQPVMNLNQVPQVT 350
+R+ + KS I+ ++++D +I + RF KA D V Q T
Sbjct: 265 KLVRDAFALAKEKSPAIIFIDELD-AIGTK-RFDSEKAG---DREV-----------QRT 308
Query: 351 LSGMLNFIDGLWSSCGDERI-IIFTTNHKDRLDPAFLRPGRMD 392
+ +LN +DG +SS D+R+ +I TN D LDPA LR GR+D
Sbjct: 309 MLELLNQLDG-FSS--DDRVKVIAATNRVDTLDPALLRSGRLD 348
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/261 (29%), Positives = 113/261 (43%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K IM+ + F+K + Y+++G +G +L GPPGTGK+ L A A
Sbjct: 307 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 365
Query: 278 NFDVYD------LELTNLRGNMELRNLL-IATENKS-ILVVEDIDCSIELQDRFAKAKAT 329
N LE+ G +R+L +A +N IL +++ID A +
Sbjct: 366 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID---------AVGRKR 416
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N TL+ +L +DG ++ +I+ TN D LDPA LRPG
Sbjct: 417 GRGNFGGQSEQEN-------TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPG 467
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP----ADVAEQLMR 444
R D I + G + +L + LE + L K A +TP ADVA +
Sbjct: 468 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVAN--VC 525
Query: 445 NEVPEIALRELIQFLEIKRRE 465
NE IA R L + K E
Sbjct: 526 NEAALIAARHLSDSINQKHFE 546
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/261 (29%), Positives = 113/261 (43%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K IM+ + F+K + Y+++G +G +L GPPGTGK+ L A A
Sbjct: 306 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 364
Query: 278 NFDVYD------LELTNLRGNMELRNLL-IATENKS-ILVVEDIDCSIELQDRFAKAKAT 329
N LE+ G +R+L +A +N IL +++ID A +
Sbjct: 365 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID---------AVGRKR 415
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N TL+ +L +DG ++ +I+ TN D LDPA LRPG
Sbjct: 416 GRGNFGGQSEQEN-------TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPG 466
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP----ADVAEQLMR 444
R D I + G + +L + LE + L K A +TP ADVA +
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVAN--VC 524
Query: 445 NEVPEIALRELIQFLEIKRRE 465
NE IA R L + K E
Sbjct: 525 NEAALIAARHLSDAINEKHFE 545
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/261 (29%), Positives = 113/261 (43%)
Query: 218 FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 277
F +A + K IM+ + F+K + Y+++G +G +L GPPGTGK+ L A A
Sbjct: 306 FKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 364
Query: 278 NFDVYD------LELTNLRGNMELRNLL-IATENKS-ILVVEDIDCSIELQDRFAKAKAT 329
N LE+ G +R+L +A +N IL +++ID A +
Sbjct: 365 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID---------AVGRKR 415
Query: 330 NAMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPG 389
+ N TL+ +L +DG ++ +I+ TN D LDPA LRPG
Sbjct: 416 GRGNFGGQSEQEN-------TLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPG 466
Query: 390 RMDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEK-AKVTP----ADVAEQLMR 444
R D I + G + +L + LE + L K A +TP ADVA +
Sbjct: 467 RFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVAN--VC 524
Query: 445 NEVPEIALRELIQFLEIKRRE 465
NE IA R L + K E
Sbjct: 525 NEAALIAARHLSDAINEKHFE 545
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 473 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 532
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 533 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 587
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 588 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 636
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 637 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LDFLAKMTNGFSGADLTEICQR-- 691
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 692 ACKLAIRESIES-EIRRERE 710
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 589
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 590 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 639 LDQLIYIPLPDEKS--RIAILKANLRKSPVAKDVD-LDFLAKMTNGFSGADLTEICQR-- 693
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 694 ACKLAIRESIEN-EIRRERE 712
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 589
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 590 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 639 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LEFLAKMTNGFSGADLTEICQR-- 693
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 694 ACKLAIRESIES-EIRRERE 712
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 589
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 590 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 639 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LEFLAKMTNGFSGADLTEICQR-- 693
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 694 ACKLAIRESIES-EIRRERE 712
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 589
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 590 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 639 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LEFLAKMTNGFSGADLTEICQR-- 693
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 694 ACKLAIRESIES-EIRRERE 712
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 589
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 590 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 639 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LEFLAKMTNGFSGADLTEICQR-- 693
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 694 ACKLAIRESIES-EIRRERE 712
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 475 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 534
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 535 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 589
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 590 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 638
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 639 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LEFLAKMTNGFSGADLTEICQR-- 693
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 694 ACKLAIRESIES-EIRRERE 712
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 479 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 538
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 539 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 593
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 594 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 642
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 643 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LDFLAKMTNGFSGADLTEICQR-- 697
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 698 ACKLAIRESIES-EIRRERE 716
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 50/187 (26%), Positives = 85/187 (45%)
Query: 228 KQM--IMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMANYLN---FDVY 282
KQ+ I + +E ++ ++ +G RG LLYGPPGTGK+ + A+AN F +
Sbjct: 211 KQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN 270
Query: 283 DLEL-TNLRGNME--LRNLLIATENKS--ILVVEDIDCSIELQDRFAKAKATNAMDLNVI 337
E+ + L G E LR TE + I+ ++++D +I D F + ++ ++
Sbjct: 271 GPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELD-AIASDDCFPSPQTHGEVERRIV 329
Query: 338 QPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGRMDVHIHM 397
S +L +DGL I++ TN + +DPA R GR D + +
Sbjct: 330 --------------SQLLTLMDGLKQRA--HVIVMAATNRPNSIDPALRRFGRFDREVDI 373
Query: 398 SYCTSCG 404
+ G
Sbjct: 374 GIPDATG 380
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 217 TFDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMAN- 275
T++ + D+K+ + + ++ V+ + + G +G L YGPPG GK+ L A+AN
Sbjct: 491 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 550
Query: 276 -YLNF-DVYDLELTNLR-GNME--LRNLLIATENKSILVVEDIDCSIELQDRFAKAKATN 330
NF + EL + G E +R + + V+ D EL D AKA+ N
Sbjct: 551 CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLF-FD---EL-DSIAKARGGN 605
Query: 331 AMDLNVIQPVMNLNQVPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDPAFLRPGR 390
D + +NQ+ L +DG+ S II TN D +DPA LRPGR
Sbjct: 606 IGDGGGAADRV-INQI--------LTEMDGM--STKKNVFIIGATNRPDIIDPAILRPGR 654
Query: 391 MDVHIHMSYCTSCGFKMLASSYLGITEHPLFLEVEGLIEKAKVTP----ADVAEQLMRNE 446
+D I++ +A + + P+ +V+ L AK+T AD+ E R
Sbjct: 655 LDQLIYIPLPDEKS--RVAILKANLRKSPVAKDVD-LEFLAKMTNGFSGADLTEICQR-- 709
Query: 447 VPEIALRELIQFLEIKR-RE 465
++A+RE I+ EI+R RE
Sbjct: 710 ACKLAIRESIES-EIRRERE 728
>UNIPROTKB|J3QRW1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000579708 Uniprot:J3QRW1
Length = 143
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 216 ATFDTLA-MDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTGKSSLIAAMA 274
+T++ + +D +K+ I + +E VK E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 69 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 127
Query: 275 NY 276
++
Sbjct: 128 HH 129
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/197 (26%), Positives = 91/197 (46%)
Query: 208 QSVNLDHPAT--FDTLAMDSDMKQMIMDDLERFVKRKEFYRNVGKAWKRGYLLYGPPGTG 265
++VNL P +D + +++Q++MD ++ K E + N+ + G LLYGPPGTG
Sbjct: 828 RNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 887
Query: 266 KSSLIAAMANYLNFDVYDLELTNLRGNMELRNLLIATENKSILVVEDIDCSIELQDRFAK 325
K+ L +A + +++G L + A+E V D+ ++ + AK
Sbjct: 888 KTLLAGVVARESG-----MNFISIKGPELLSKYIGASEQ----AVRDVF----IRAQAAK 934
Query: 326 AKATNAMDLNVIQPVMNLNQ--VPQVTLSGMLNFIDGLWSSCGDERIIIFTTNHKDRLDP 383
+ I P + V ++ +L +DG+ G ++ T+ D +DP
Sbjct: 935 PCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGV--YVLAATSRPDLIDP 992
Query: 384 AFLRPGRMDVHIHMSYC 400
A LRPGR+D + YC
Sbjct: 993 ALLRPGRLDKCV---YC 1006
WARNING: HSPs involving 128 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 490 435 0.00087 118 3 11 22 0.50 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 378
No. of states in DFA: 616 (65 KB)
Total size of DFA: 275 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 39.93u 0.08s 40.01t Elapsed: 00:00:39
Total cpu time: 40.00u 0.08s 40.08t Elapsed: 00:00:41
Start: Thu May 9 20:01:14 2013 End: Thu May 9 20:01:55 2013
WARNINGS ISSUED: 2