Query 011258
Match_columns 490
No_of_seqs 148 out of 178
Neff 5.0
Searched_HMMs 46136
Date Thu Mar 28 23:21:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011258.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011258hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02818 tocopherol cyclase 100.0 1E-131 2E-136 1017.6 37.7 401 64-479 1-403 (403)
2 PF14249 Tocopherol_cycl: Toco 100.0 9E-101 2E-105 781.8 34.8 333 78-448 1-336 (336)
3 PF07143 CrtC: Hydroxyneurospo 97.8 0.0003 6.5E-09 71.5 13.0 58 266-326 143-204 (312)
4 PF10974 DUF2804: Protein of u 95.0 0.23 4.9E-06 51.8 11.4 107 273-389 172-284 (333)
5 PF08622 Svf1: Svf1-like; Int 54.9 29 0.00062 36.7 6.2 23 269-291 134-156 (325)
6 COG5621 Predicted secreted hyd 36.1 5.7E+02 0.012 27.3 20.0 47 275-324 206-256 (354)
7 PF06523 DUF1106: Protein of u 32.5 30 0.00065 29.2 1.8 26 71-105 8-33 (91)
8 PF10974 DUF2804: Protein of u 24.7 4.7E+02 0.01 27.3 9.4 80 370-456 121-209 (333)
9 COG4729 Uncharacterized conser 19.2 2.9E+02 0.0062 26.5 5.8 23 275-297 117-139 (156)
10 COG5620 Uncharacterized conser 15.1 1.3E+02 0.0027 29.5 2.4 67 291-362 48-115 (200)
No 1
>PLN02818 tocopherol cyclase
Probab=100.00 E-value=1.1e-131 Score=1017.57 Aligned_cols=401 Identities=70% Similarity=1.347 Sum_probs=392.7
Q ss_pred CccCCCcccccCCCCCCceeeEEEEEecCCCCeEEEEEEEeecCCcccccchhhhhccCCccccceEEEEecCCeEEEEc
Q 011258 64 ELRTPHSGYHFDGSTRRFFEGWYFRVSIPERKQSFCIIYSVENPAFKKKLSSLEVAQHGPRFTGVGVQILGADDKYMCHY 143 (490)
Q Consensus 64 ~~~tPhsgyh~~g~~~~fFEGWYfK~~~p~~~~sfa~iysI~~p~g~~~~~a~~~~~~~~~~~g~~iQVl~~~~~y~~~~ 143 (490)
+++||||||||||++|||||||||||++||.+|||||||||+||.++++++.|++.++|++++|+++|||+++|+|+||+
T Consensus 1 ~~~tPHsGyh~dg~~rrFfEGWy~rvtlpe~~qsf~fmysiedp~~~~~~~~~~~~~~~~~~~g~~aQilg~~d~y~~~~ 80 (403)
T PLN02818 1 ALRTPHSGYHFDGTPRRFFEGWYFKVSLPEVKQSFAFMYSIEDPAFRERMSGLEELLHGSRFTGVGAQILGPDDKYLCQF 80 (403)
T ss_pred CCcCCCCCcccCCCCcCcccceEEEEEcCCCCceEEEEEEeeCCccccccccchhhcCCCCCCCceeeeecCCCceEEEe
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccCcceEEeCceecCCCCCCCCCCCCCCccccccccccccchhhhceeeccceeeccceeceeeecCCCCccc
Q 011258 144 SEESSNFWGSRHELMLGNTFRADKGSQPPTKEVPPQVRGSYLLLHGFSWQEFNRRVLEGFQVTPLWHQGCIHDDGRTNFA 223 (490)
Q Consensus 144 ~~~~~~f~~~~~~l~iG~~~~s~~~~~~~~~~~~p~~~g~~~~~~~~~~~~f~~~~~~g~q~t~~~~qG~l~~~~~~~~~ 223 (490)
++++.+||+++++|+|||++..+.+.+.+.++|+|+ ||+++|+||||+||+||||+|+|+++++|.
T Consensus 81 ~~~~~~Fw~~~~~l~lg~~~~~~~~~~~~~~~~~p~--------------~f~~~v~~G~q~t~~~~qG~i~d~~~~~~~ 146 (403)
T PLN02818 81 TEDSTKFWGSRHELALGNTFAPKNGSTPPRSEVPPD--------------EFYRRVEEGFQVTPFWHQGRLRDDGRSPYA 146 (403)
T ss_pred CCCcccccccchhcccccccccccCCCCCcccCChH--------------HHHHhhhcceeeccceecceecCCCCCccc
Confidence 999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred ccccccccceecccccccCCCCCCCCccCCcccccCCCCcceEEEecCcceEEEEEECCEEEEEcCCcccccCCCCCCCC
Q 011258 224 ETVKSARWEYSTRPVYGWGNVGSKQNSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFP 303 (490)
Q Consensus 224 ~~~~~~~W~~si~p~~gwG~~~~~~~~~mGpfs~LP~mEphw~V~m~h~lasG~I~~NGk~~dF~~g~GYiEKNWG~SFP 303 (490)
++++++||+|+|+|+||||++.++|++|||||++||+|||||||+|+|++++|+|+|||++|+|++++||+|||||+|||
T Consensus 147 ~~~~~~rw~y~~~p~~gwG~~~~~~~stmGwfs~lP~fEp~wqVlmahg~asG~I~wnG~~yeF~~apgY~EKNWG~sFP 226 (403)
T PLN02818 147 KTVKTARWEYSTRPVYGWGDVGSKQKSTAGWLAALPVFEPHWQICMAHGLATGWIEWGGERYEFEDAPSYSEKNWGGGFP 226 (403)
T ss_pred cccceEEEEEEeeeeeecCCCCCCCCCccchhhhcccccCcceeeecCcEEEEEEEECCEEEEecCCCeeeEccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCCCCcceEEEEcccccccCcc-ccccceEEEEEEECCEEEEEecCCccEEEEEeeeeeEEEEEEeCcEE
Q 011258 304 RKWFWVQCNVFEGATGEVALTAGGGLRQLPVL-DSFENAAMIGIHYDGILYEFVPWNGVVSWEISQWGYWYFAAENQTHM 382 (490)
Q Consensus 304 ~~w~W~Qcn~Fd~~~~s~sLt~AGG~~~IP~l-~~f~~~~lIgl~~~Gk~YrFaty~ga~~~~v~~~g~w~i~~~n~~~~ 382 (490)
++|+|+|||+|+++++ +||||+||+|+||++ .++++++||+||++||+|||+||+|++.|+|++|++|+|+++|++|+
T Consensus 227 ~kWfWiQCN~F~~~~~-LalTagGg~r~IP~l~~~fe~v~ligvh~~GkfYrFap~~g~v~w~v~pwg~W~i~a~n~~~~ 305 (403)
T PLN02818 227 SKWFWVQCNVFDGASG-LSLTAGGGLRGLPLLPGVFEEVALIGVHYDGKFYEFVPWNGEVEWDVSPWGRWKLRAENETHE 305 (403)
T ss_pred cCeeeEecccCCCCCc-EEEEecCCcccCccccccccceEEEEEEECCEEEEEEeecceEEEEEccCCcEEEEEECCCEE
Confidence 9999999999999998 999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred EEEEEEe-cCCCceEeCCCCCCCcccceeecccEEEEEEEEeccccCCCceEEEEEeeceeEEeeeCCcccccccccccc
Q 011258 383 VELKATT-KYPGTTLRAPTSEAGLAPACKDTCFGELTLQLWERRYDGTKGKMILDVTSDMAALEVGGGPWFNTWKAKTAT 461 (490)
Q Consensus 383 Lei~~~~-~~~g~~L~AP~~g~gM~~~c~ES~~g~v~v~L~ek~~~g~~g~lI~d~~s~~AglEiGG~pw~~~w~~~~~~ 461 (490)
|+|++++ +.+++.|+||+.+.+|++.|+||+.|+++|+|+++.+++.+|++|++++|++||||+||+||+++|+++++|
T Consensus 306 veIe~~~~~~~g~~LrAPt~~~gM~~~crESl~G~l~l~L~~~~~~~~~gk~I~d~~S~~AGLEvGGgpW~~~W~~~~~~ 385 (403)
T PLN02818 306 VELEATTAKEPGTVLRAPTTDVGLAPFCRDTFAGKLKLQLWERSWDGSKGKLILDATSSMAAVEVGGGPWWSTWKGTARM 385 (403)
T ss_pred EEEEEEEcCCCCceEECCCCCCCCCchhhhcCCceEEEEEEecccCCCCCcEEEEeccCceeEEecCCcCcccccccccc
Confidence 9999999 668999999998868999999999999999999987788888999999999999999999999999999999
Q ss_pred hHHHhhhcccceeccccc
Q 011258 462 PELLRRTLNVPVDVDGLF 479 (490)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~ 479 (490)
+|||+++|++|||||+|+
T Consensus 386 ~~~~~~~~~~p~d~~~~~ 403 (403)
T PLN02818 386 KEPLKSLLGLPVDVESIF 403 (403)
T ss_pred hhhHHHHhCCccchhhcC
Confidence 999999999999999985
No 2
>PF14249 Tocopherol_cycl: Tocopherol cyclase
Probab=100.00 E-value=9e-101 Score=781.84 Aligned_cols=333 Identities=53% Similarity=1.100 Sum_probs=316.0
Q ss_pred CCCceeeEEEEEecCCCCeEEEEEEEeecCCcccccchhhhhccCCccccceEEEEecCCeEEEEcCccccccccCcceE
Q 011258 78 TRRFFEGWYFRVSIPERKQSFCIIYSVENPAFKKKLSSLEVAQHGPRFTGVGVQILGADDKYMCHYSEESSNFWGSRHEL 157 (490)
Q Consensus 78 ~~~fFEGWYfK~~~p~~~~sfa~iysI~~p~g~~~~~a~~~~~~~~~~~g~~iQVl~~~~~y~~~~~~~~~~f~~~~~~l 157 (490)
+|||||||||||++|+.+|||||||||+||.++++ ++|+++|||+++|+|+||+++++.+||++++++
T Consensus 1 ~~~ffEGWy~rvtlp~~~~sf~~mysi~dp~~~~~------------~~g~~aqilg~~d~y~~~~~~~~~~fw~~~~~~ 68 (336)
T PF14249_consen 1 SRRFFEGWYFRVTLPEIGQSFAFMYSIEDPIGGQP------------YSGGAAQILGPDDKYLCRTFPDVQKFWASRHEL 68 (336)
T ss_pred CCccccceEEEEEcCCCCcEEEEEEEEEcCCCCCC------------cCCceeEEecCCCeEEEEECCCCCceEEecccc
Confidence 58999999999999999999999999999999877 899999999999999999999999999999999
Q ss_pred EeCceecCC---CCCCCCCCCCCCccccccccccccchhhhceeeccceeeccceeceeeecCCCCccccccccccccee
Q 011258 158 MLGNTFRAD---KGSQPPTKEVPPQVRGSYLLLHGFSWQEFNRRVLEGFQVTPLWHQGCIHDDGRTNFAETVKSARWEYS 234 (490)
Q Consensus 158 ~iG~~~~s~---~~~~~~~~~~~p~~~g~~~~~~~~~~~~f~~~~~~g~q~t~~~~qG~l~~~~~~~~~~~~~~~~W~~s 234 (490)
+||+.+... +.++.++++|+|+ +|+++|+||||+|++||||.|+|+++..+| +|+|+
T Consensus 69 ~lg~~~~~~~~~~~~~~~~~~~~p~--------------~f~~~v~~g~q~t~~~~qg~~~~~~~~~~~------~w~y~ 128 (336)
T PF14249_consen 69 ALGNLFLGHWGKTDLKPPPGYLPPQ--------------EFERRVQEGYQVTATWNQGIIRDPGTGKTC------RWDYS 128 (336)
T ss_pred ccCceeeeecccCCCCCCccccChH--------------HhHhhhhccceeccccccCCccCCCCccEE------EEEEE
Confidence 988888777 6677788899999 999999999999999999999999987777 89999
Q ss_pred cccccccCCCCCCCCccCCcccccCCCCcceEEEecCcceEEEEEECCEEEEEcCCcccccCCCCCCCCCCcEEEEeccC
Q 011258 235 TRPVYGWGNVGSKQNSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWVQCNVF 314 (490)
Q Consensus 235 i~p~~gwG~~~~~~~~~mGpfs~LP~mEphw~V~m~h~lasG~I~~NGk~~dF~~g~GYiEKNWG~SFP~~w~W~Qcn~F 314 (490)
|+|++|||+++++|++|||||++||+|||||||+|+|++++|+|+|||++|+|++|+||+|||||+|||++|+|+|||+|
T Consensus 129 i~p~~~wg~~~~~~~~~mGwfs~lP~~Ec~w~V~~~~g~asG~i~~nG~~~~F~~g~gY~EKNWG~sFP~~W~W~QcN~F 208 (336)
T PF14249_consen 129 IKPIYGWGNSGRLQKSIMGWFSFLPFFECYWQVLMAHGLASGWIEWNGKRYDFTGGPGYIEKNWGGSFPSKWFWIQCNSF 208 (336)
T ss_pred EcccccCCCccccCCCccchHhhccccCCCchheecCcEEEEEEEECCEEEEECCCceeeccccCcCCCCCcEEEEcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEEEcccccccCccccccceEEEEEEECCEEEEEecCCccEEEEEeeeeeEEEEEEeCcEEEEEEEEecCCCc
Q 011258 315 EGATGEVALTAGGGLRQLPVLDSFENAAMIGIHYDGILYEFVPWNGVVSWEISQWGYWYFAAENQTHMVELKATTKYPGT 394 (490)
Q Consensus 315 d~~~~s~sLt~AGG~~~IP~l~~f~~~~lIgl~~~Gk~YrFaty~ga~~~~v~~~g~w~i~~~n~~~~Lei~~~~~~~g~ 394 (490)
+++++ ++|+++||+++||++ .+.++|||||++||+|||+||++.+.|+|++|++|+|+++|++|+|+|+++++.+++
T Consensus 209 ~~~~~-~slt~sgg~~~i~~~--~e~~~ligi~~~Gk~YrF~p~n~~v~~~V~~~g~w~i~~~n~~~~lei~~~~~~~g~ 285 (336)
T PF14249_consen 209 DGEPD-VSLTASGGRRPIPGL--TESVGLIGIHYDGKFYRFAPYNSKVSWQVDPWGRWRIRARNRKYELEIEATTDSPGT 285 (336)
T ss_pred CCCCC-eEEEEeecccccCcc--ccccEEEEEEECCEEEEEEcccceEEEEEeeCceEEEEEECCCEEEEEEEEECCCCc
Confidence 98876 999999999999875 445899999999999999999999999999999999999999999999999877789
Q ss_pred eEeCCCCCCCcccceeecccEEEEEEEEeccccCCCceEEEEEeeceeEEeeeC
Q 011258 395 TLRAPTSEAGLAPACKDTCFGELTLQLWERRYDGTKGKMILDVTSDMAALEVGG 448 (490)
Q Consensus 395 ~L~AP~~g~gM~~~c~ES~~g~v~v~L~ek~~~g~~g~lI~d~~s~~AglEiGG 448 (490)
.|+||+.+ +|++.|+||+.|+++|+|++++ +.++++|++++|++||||+||
T Consensus 286 ~L~AP~~~-~m~~~~rEsl~g~v~v~L~~~~--~~~g~lI~~~~s~~AGLEvGG 336 (336)
T PF14249_consen 286 PLRAPTEG-GMQPRCRESLQGRVRVELWEKK--GKKGKLIFDGTSNLAGLEVGG 336 (336)
T ss_pred EEeCcCCC-CCchhhhccCcEEEEEEEEECc--CCCCcEEEEeecCcEEEeecC
Confidence 99999988 8999999999999999999953 455899999999999999997
No 3
>PF07143 CrtC: Hydroxyneurosporene synthase (CrtC); InterPro: IPR010791 This family consists of several purple photosynthetic bacterial hydroxyneurosporene synthase (CrtC) proteins. The enzyme catalyses the conversion of various acyclic carotenes including 1-hydroxy derivatives. This broad substrate specificity reflects the participation of CrtC in 1'-HO-spheroidene and in spirilloxanthin biosynthesis [].; GO: 0016491 oxidoreductase activity, 0015979 photosynthesis, 0015995 chlorophyll biosynthetic process, 0016117 carotenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2ICH_B.
Probab=97.79 E-value=0.0003 Score=71.46 Aligned_cols=58 Identities=19% Similarity=0.396 Sum_probs=42.9
Q ss_pred EEEecCcceEEEEEECCEEEEEcCCcccccCCCCCCC--CC--CcEEEEeccCCCCCcceEEEEc
Q 011258 266 QICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAF--PR--KWFWVQCNVFEGATGEVALTAG 326 (490)
Q Consensus 266 ~V~m~h~lasG~I~~NGk~~dF~~g~GYiEKNWG~SF--P~--~w~W~Qcn~Fd~~~~s~sLt~A 326 (490)
.-++.+..++|+|+++|+.+.++ |.||.+||||... +. .|-|.+.+.-++. ++|+...
T Consensus 143 yws~P~~~v~Gtl~i~g~~~~V~-G~aw~Dh~WG~~~l~~~~~gW~W~~l~l~dg~--~l~~y~~ 204 (312)
T PF07143_consen 143 YWSAPRLRVSGTLTIDGKTIQVT-GTAWFDHQWGSFPLAPGQSGWDWFRLQLDDGR--ELMLYQL 204 (312)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEE-EEEEEEEEEESS-S-TTEEEEEEEEEEETTS---EEEEEEE
T ss_pred EEccccEEEEEEEEECCEEEEEe-eeEEEEEcccCccCccCCCccEEEEEECCCCC--EEEEEEE
Confidence 33477777899999999999999 8999999999754 22 5999999643322 2555443
No 4
>PF10974 DUF2804: Protein of unknown function (DUF2804); InterPro: IPR021243 This is a family of proteins with unknown function.
Probab=95.02 E-value=0.23 Score=51.76 Aligned_cols=107 Identities=15% Similarity=0.374 Sum_probs=75.9
Q ss_pred ceEEEEEECCEEEEEcCCcccccCCCCCCC---CCCcEEEEeccCCCCCcceEEEEcccccccCccccccceEEEEEEEC
Q 011258 273 LSTGWIEWDGERFEFQDAPSYSEKNWGGAF---PRKWFWVQCNVFEGATGEVALTAGGGLRQLPVLDSFENAAMIGIHYD 349 (490)
Q Consensus 273 lasG~I~~NGk~~dF~~g~GYiEKNWG~SF---P~~w~W~Qcn~Fd~~~~s~sLt~AGG~~~IP~l~~f~~~~lIgl~~~ 349 (490)
.++|+|.++|++++|+...++.=-|||+.+ -..|-|.-++...+.-..+.|-++.|... +- +..=-+|.++
T Consensus 172 pv~G~v~~g~~~~~~~~~~~~a~lD~~rG~~~~~t~W~Was~sg~~~dG~~iG~NL~~g~~d-~t-----~~tEN~l~~d 245 (333)
T PF10974_consen 172 PVSGSVRLGGKEYSFDPENAFAVLDWGRGYWPRETFWNWASASGRLDDGRRIGFNLGAGFND-GT-----GATENALWVD 245 (333)
T ss_pred ceEEEEEECCEEEecCCCCcEEEEEcCCCccCCcCeEEEEEEEEECCCCCEEEEEeeccccc-CC-----CCcceEEEEC
Confidence 359999999999999977777777888764 34899999998864221377777776544 11 1233568899
Q ss_pred CEEEEEecCCccEEEEEee---eeeEEEEEEeCcEEEEEEEEe
Q 011258 350 GILYEFVPWNGVVSWEISQ---WGYWYFAAENQTHMVELKATT 389 (490)
Q Consensus 350 Gk~YrFaty~ga~~~~v~~---~g~w~i~~~n~~~~Lei~~~~ 389 (490)
|+.+++ ..+.++++. -..|+|+-.++...|+.+-..
T Consensus 246 G~~~kL----~~V~f~~~~~~~~~pW~i~s~dg~vdL~FtP~~ 284 (333)
T PF10974_consen 246 GKLHKL----PPVRFEYDREDPMKPWRITSDDGRVDLTFTPIF 284 (333)
T ss_pred CEEEEC----CcEEEEecCcCCCCCeEEEcCCCeEEEEEEEee
Confidence 999988 344666653 247999998777766665443
No 5
>PF08622 Svf1: Svf1-like; InterPro: IPR013931 This entry represents oxidative stress survival proteins, such as Svf1. The protein Svf1 is required for yeast survival under conditions of oxidative stress, including cold stress []. Cells deficient in Svf1 have increased levels of reactive oxygen species (ROS) under certain conditions. ; GO: 0006979 response to oxidative stress
Probab=54.90 E-value=29 Score=36.71 Aligned_cols=23 Identities=22% Similarity=0.368 Sum_probs=18.2
Q ss_pred ecCcceEEEEEECCEEEEEcCCc
Q 011258 269 MAGGLSTGWIEWDGERFEFQDAP 291 (490)
Q Consensus 269 m~h~lasG~I~~NGk~~dF~~g~ 291 (490)
..-..++|+|..+++.++|++.+
T Consensus 134 wPR~~v~GtI~~~~~~~~~~g~~ 156 (325)
T PF08622_consen 134 WPRCKVEGTITTKGKEIDFKGVP 156 (325)
T ss_pred eeccEEEEEEEECCEEEEecCCc
Confidence 33445599999999999999853
No 6
>COG5621 Predicted secreted hydrolase [General function prediction only]
Probab=36.07 E-value=5.7e+02 Score=27.34 Aligned_cols=47 Identities=23% Similarity=0.558 Sum_probs=33.9
Q ss_pred EEEEEECCEEEEEcCCcccccCCCCCCC----CCCcEEEEeccCCCCCcceEEE
Q 011258 275 TGWIEWDGERFEFQDAPSYSEKNWGGAF----PRKWFWVQCNVFEGATGEVALT 324 (490)
Q Consensus 275 sG~I~~NGk~~dF~~g~GYiEKNWG~SF----P~~w~W~Qcn~Fd~~~~s~sLt 324 (490)
+|+|.+||+..+++ |.+..+|-||++- =..|=|.-.. +++... +|+.
T Consensus 206 ~Gtv~v~g~t~~V~-G~AWld~Ewgs~~lA~~q~gwDwfslh-l~~ge~-Lmlf 256 (354)
T COG5621 206 SGTVSVDGETFEVT-GLAWLDHEWGSQPLASEQVGWDWFSLH-LASGEK-LMLF 256 (354)
T ss_pred eeeEEecCceeEEc-ceeeeccccccccccccccccceEEEE-cCCCcc-eeee
Confidence 89999999998887 8999999999843 2366666544 333333 5653
No 7
>PF06523 DUF1106: Protein of unknown function (DUF1106); InterPro: IPR009490 This family consists of several hypothetical bacterial proteins found in Escherichia coli and Citrobacter rodentium. The function of this family is unknown.
Probab=32.48 E-value=30 Score=29.17 Aligned_cols=26 Identities=38% Similarity=0.667 Sum_probs=20.3
Q ss_pred ccccCCCCCCceeeEEEEEecCCCCeEEEEEEEee
Q 011258 71 GYHFDGSTRRFFEGWYFRVSIPERKQSFCIIYSVE 105 (490)
Q Consensus 71 gyh~~g~~~~fFEGWYfK~~~p~~~~sfa~iysI~ 105 (490)
-|...|++||||| ++..||.+|-+-.
T Consensus 8 lfy~~g~rrryfe---------q~e~sfsiicgrl 33 (91)
T PF06523_consen 8 LFYFPGQRRRYFE---------QGEHSFSIICGRL 33 (91)
T ss_pred HhcCCcceeehhh---------ccCeeEEEEeece
Confidence 3678899999998 4688898886543
No 8
>PF10974 DUF2804: Protein of unknown function (DUF2804); InterPro: IPR021243 This is a family of proteins with unknown function.
Probab=24.67 E-value=4.7e+02 Score=27.34 Aligned_cols=80 Identities=16% Similarity=0.172 Sum_probs=50.7
Q ss_pred eeEEEE----EEeCcEEEEEEEEec--CCCceEeCCCCCCCccccee-ecccEEEEEEEEeccccCCCceEEEEEeecee
Q 011258 370 GYWYFA----AENQTHMVELKATTK--YPGTTLRAPTSEAGLAPACK-DTCFGELTLQLWERRYDGTKGKMILDVTSDMA 442 (490)
Q Consensus 370 g~w~i~----~~n~~~~Lei~~~~~--~~g~~L~AP~~g~gM~~~c~-ES~~g~v~v~L~ek~~~g~~g~lI~d~~s~~A 442 (490)
+.++|. ...+.+.+++++... .+.+.+..|....+.....+ .++.++..|++-. .+..++.....|
T Consensus 121 ~~~~l~~~~~~~~~~l~~~~~l~~~~~~e~L~vv~P~~~~~f~yt~K~~~~pv~G~v~~g~-------~~~~~~~~~~~a 193 (333)
T PF10974_consen 121 GGRRLDVDLFGKGPGLEADLELDRPPGHEPLNVVTPWGENRFYYTQKQNGLPVSGSVRLGG-------KEYSFDPENAFA 193 (333)
T ss_pred CeEEEEEEccCCCCCEEEEEEEeCCCCCCCEEEEeecCCCCEEEEEEecCcceEEEEEECC-------EEEecCCCCcEE
Confidence 566666 667788888888742 24478889986633233333 2444566666621 134466667889
Q ss_pred EEeeeCCccc--cccc
Q 011258 443 ALEVGGGPWF--NTWK 456 (490)
Q Consensus 443 glEiGG~pw~--~~w~ 456 (490)
.|..+.+.|. +.|.
T Consensus 194 ~lD~~rG~~~~~t~W~ 209 (333)
T PF10974_consen 194 VLDWGRGYWPRETFWN 209 (333)
T ss_pred EEEcCCCccCCcCeEE
Confidence 9999998874 4555
No 9
>COG4729 Uncharacterized conserved protein [Function unknown]
Probab=19.19 E-value=2.9e+02 Score=26.46 Aligned_cols=23 Identities=13% Similarity=0.075 Sum_probs=18.5
Q ss_pred EEEEEECCEEEEEcCCcccccCC
Q 011258 275 TGWIEWDGERFEFQDAPSYSEKN 297 (490)
Q Consensus 275 sG~I~~NGk~~dF~~g~GYiEKN 297 (490)
.-+|.+||+.|+.....+..|+.
T Consensus 117 ~~~l~vngr~~~l~~~~~~~ei~ 139 (156)
T COG4729 117 GYRLCVNGRSYALARDISPPEIK 139 (156)
T ss_pred cEEEeeCCEEEEeeccCCccCcc
Confidence 45899999999988777777765
No 10
>COG5620 Uncharacterized conserved protein [Function unknown]
Probab=15.05 E-value=1.3e+02 Score=29.54 Aligned_cols=67 Identities=13% Similarity=0.203 Sum_probs=44.2
Q ss_pred cccccCCCCCCCCCCcEEEEe-ccCCCCCcceEEEEcccccccCccccccceEEEEEEECCEEEEEecCCccE
Q 011258 291 PSYSEKNWGGAFPRKWFWVQC-NVFEGATGEVALTAGGGLRQLPVLDSFENAAMIGIHYDGILYEFVPWNGVV 362 (490)
Q Consensus 291 ~GYiEKNWG~SFP~~w~W~Qc-n~Fd~~~~s~sLt~AGG~~~IP~l~~f~~~~lIgl~~~Gk~YrFaty~ga~ 362 (490)
.-.+||-|| |.-+.++|+|- ..|+.--..+.+ .++.+.||+..+ +.+=|.++.+++.++..-|+|..
T Consensus 48 ~~W~e~Gfg-s~~dg~~wi~~P~~f~pVIe~~~~--~~a~~sV~i~~~--aFGdii~W~~~~ti~in~~kg~~ 115 (200)
T COG5620 48 KFWIEKGFG-SWSDGQYWICDPSIFQPVIEMSYF--RDATVSVPIGYT--AFGDIITWEGNATIRINLYKGGV 115 (200)
T ss_pred HHHHhcccc-eeccceEEecCccccchhHHHhhc--cCCceEEEEEEe--ccCcEEEecCCceEEEEecCCcc
Confidence 457899998 89999999995 455533221222 335556666522 23555588899999988887764
Done!