Query 011265
Match_columns 490
No_of_seqs 182 out of 1593
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 04:34:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011265.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011265hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.8 3.3E-16 1.1E-20 158.9 30.8 358 71-452 6-380 (445)
2 3gia_A Uncharacterized protein 99.7 2E-13 6.9E-18 138.2 32.2 353 71-451 4-369 (444)
3 4djk_A Probable glutamate/gamm 99.5 2.2E-11 7.6E-16 125.5 30.0 245 71-332 9-262 (511)
4 2jln_A MHP1; hydantoin, transp 98.8 5.4E-06 1.8E-10 84.5 31.1 333 72-436 24-375 (501)
5 3dh4_A Sodium/glucose cotransp 98.1 0.013 4.4E-07 59.9 34.8 148 71-234 18-167 (530)
6 2xq2_A Sodium/glucose cotransp 97.7 0.037 1.3E-06 57.3 28.9 87 72-159 48-135 (593)
7 2a65_A Leutaa, Na(+):neurotran 94.4 4.8 0.00016 40.5 31.9 56 74-129 8-68 (519)
8 3l1l_A Arginine/agmatine antip 54.7 1.4E+02 0.0048 28.6 12.8 47 135-181 259-305 (445)
9 3tx3_A Uncharacterized protein 34.7 2.4E+02 0.0083 24.9 11.5 34 295-331 23-56 (249)
10 4djk_A Probable glutamate/gamm 34.6 3.3E+02 0.011 26.5 15.4 32 148-179 287-318 (511)
11 3gia_A Uncharacterized protein 28.3 1.6E+02 0.0054 28.2 8.2 44 136-179 258-301 (444)
12 4b4a_A TATC, SEC-independent p 22.4 4E+02 0.014 23.5 13.2 116 352-471 59-201 (249)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.77 E-value=3.3e-16 Score=158.85 Aligned_cols=358 Identities=11% Similarity=0.026 Sum_probs=211.9
Q ss_pred CCCCCchHHHHHHHHHHhHhhhhchHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCHHHHHHHhcCCc
Q 011265 71 SNEGSGVAGAVFNLTTTVIGAGIMALPAAMKVLGLAVGFVLIIFMGILSEVSVELLVRFSVLC-KATSYGEVVQYALGRP 149 (490)
Q Consensus 71 ~~~~~s~~~~~~~l~~~~iG~GiL~lP~af~~~G~~~g~i~l~~~~~~~~~s~~~l~~~~~~~-~~~~y~~l~~~~~G~~ 149 (490)
++|+.|.++.++..+++++|+|++.+|....+.|. .+++.+++.+++.......+.|...+. +.....+.+++.+||+
T Consensus 6 ~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~-~~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G~~ 84 (445)
T 3l1l_A 6 DAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGG-IAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPF 84 (445)
T ss_dssp -CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSCHH
T ss_pred CCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcCCh
Confidence 45689999999999999999999999988888886 478888888888988888899987654 4457888889999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchhhccCcccchhHHHHHHHHHHHHhccccccchhhhhhhhHH
Q 011265 150 AKILSEICIILNNAGVLVVYLIIVGDVMSGSLHHTGVFDQWLGKGMWDHRKLLILIVLVVFLAPLCALDRIESLSMSSAA 229 (490)
Q Consensus 150 ~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~l~~l~~~s~~ 229 (490)
..++..+...+........+....++++....+.. +.+ + ....+ ...+++++-....+..+....++.+
T Consensus 85 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~--~~~~~-~~~~~~~~~~in~~g~~~~~~~~~~ 153 (445)
T 3l1l_A 85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPIL-------KDP-W--VLTIT-CVVVLWIFVLLNIVGPKMITRVQAV 153 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGG-------GSH-H--HHHHH-HHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccc-------ccc-H--HHHHH-HHHHHHHHHHHHHhchHHHHHHHHH
Confidence 99999999988887777788888888876533211 011 1 11111 1111222233334445555555544
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC--CchhhhhHHhhhhhhhhhhhhhcchHHHHHhcccCCccchhHH
Q 011265 230 SVALAVVFVVVCFFIAFIKLVEGKLDPPRMSPDFG--SKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRTPQKMNHV 307 (490)
Q Consensus 230 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~faf~~~~~~~~i~~~m~~p~~~~~~~~ 307 (490)
.....++.+++.++ ......+ +....+.+. ...++.++..++....|+|.+........+|+|||+ |+.+|+
T Consensus 154 ~~~~~i~~~~~~~i---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~-r~ip~a 227 (445)
T 3l1l_A 154 ATVLALIPIVGIAV---FGWFWFR--GETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPK-RNVPIA 227 (445)
T ss_dssp HHHHHHHHHHHHHH---TTSTTCC--CCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHH-HHHHHH
T ss_pred HHHHHHHHHHHHHH---HHHHHhC--hhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCcc-ccccHH
Confidence 44322222222111 1111111 111111111 112356778899999999999999999999999997 789999
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhcCCCCc----hhhhcCCccccCcccchHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 011265 308 GRLTTILCIVVYSSTAISGYLLFGKDTE----SDVLTNFDKDLGIGYSTALNYIVRVGYIFHLILVFPVVHFSLRQTVDA 383 (490)
Q Consensus 308 ~~~~~~~~~~~Y~~~g~~gy~~fG~~~~----~~il~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pl~~~~~~~~~~~ 383 (490)
+..+..++.++|.+..+......+.+.. .+...-+... .+++...+..+...+..+.+.--..+...+.+..
T Consensus 228 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~ 303 (445)
T 3l1l_A 228 TIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMA----LGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKA 303 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTTSCSTTCTHHHHHHHH----HCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHhccCcHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887776664321 1111111110 0023334444445555555444444444444443
Q ss_pred hhccCCCC------ccccchhhHHHHHHHHHHHHHHHhhc----CchhHHHHHhhhhhhhhHHHhhhHHHHHHhhcCCC
Q 011265 384 LFFEGSAP------LLESRKRSLALTVVLLVLIYFGSTMI----PSIWTAFKFTGATTAVSLGFIFPPLVALRLRKEGP 452 (490)
Q Consensus 384 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ia~~~----p~~~~i~~l~Ga~~~~~~~~ilP~~~~~~~~~~~~ 452 (490)
.-..+.-+ .+.+...+......++...+.+.... ..++.+.++.+ .+..+.|.++++.+++++++++
T Consensus 304 ~a~dg~lP~~~~~~~~~~~P~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~y~~~~~~~~~~r~~~~ 380 (445)
T 3l1l_A 304 AADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSV--IFTLVPYLYTCAALLLLGHGHF 380 (445)
T ss_dssp HHHTTSSCGGGGCCCTTCCCHHHHHHHHHHHHHHHHSTTSHHHHCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHSSSS
T ss_pred HHhCCCCcHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCc
Confidence 32111111 00111122211111111111111112 34666767655 4557889999999999887654
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.65 E-value=2e-13 Score=138.25 Aligned_cols=353 Identities=12% Similarity=0.113 Sum_probs=200.1
Q ss_pred CCCCCchHHHHHHHHHHhHhhhhchHH-HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCCHHHHHHHhcCC
Q 011265 71 SNEGSGVAGAVFNLTTTVIGAGIMALP-AAMKVLGLAVGFVLIIFMGILSEVSVELLVRFSVLC-KATSYGEVVQYALGR 148 (490)
Q Consensus 71 ~~~~~s~~~~~~~l~~~~iG~GiL~lP-~af~~~G~~~g~i~l~~~~~~~~~s~~~l~~~~~~~-~~~~y~~l~~~~~G~ 148 (490)
++|+.|.++.+...+++++|+|++..| .+...+|- ..++.+++.+++.......+.|...+. +.....+.+++.+||
T Consensus 4 ~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~-~~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G~ 82 (444)
T 3gia_A 4 KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGD 82 (444)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHCS
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhCc
Confidence 467899999999999999999999988 55666775 577788888888888889999987654 445677888999999
Q ss_pred ch-hHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchhhccCcccchhHHHHHHHHHHHHhccccccchhhhhhhh
Q 011265 149 PA-KILSEICIILNNAGVLVVYLIIVGDVMSGSLHHTGVFDQWLGKGMWDHRKLLILIVLVVFLAPLCALDRIESLSMSS 227 (490)
Q Consensus 149 ~~-~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~l~~l~~~s 227 (490)
+. ...+.+...+........+....++++....+.. ...+ ...+....+++++-....+..+....++
T Consensus 83 ~~~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~in~~g~~~~~~~~ 151 (444)
T 3gia_A 83 NIITGALSILLWMSYVISIALFAKGFAGYFLPLINAP--------INTF---NIAITEIGIVAFFTALNFFGSKAVGRAE 151 (444)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------CCHH---HHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------CchH---HHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 62 2233455555555566667777777665422210 0101 0111111112222233344455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCchhhhhHHhhhhhhhhhhhhhcchHHHHHhcccCCccchhHH
Q 011265 228 AASVALAVVFVVVCFFIAFIKLVEGKLDPPRMSPDFGSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRTPQKMNHV 307 (490)
Q Consensus 228 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~faf~~~~~~~~i~~~m~~p~~~~~~~~ 307 (490)
.+.....+..+++.++..+... + +.+..|.. .+.++.+++.++....|+|.+........+|+|||+ |+.+|+
T Consensus 152 ~~~~~~~i~~~~~~ii~~~~~~---~--~~~~~~~~-~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~-r~ip~a 224 (444)
T 3gia_A 152 FFIVLVKLLILGLFIFAGLITI---H--PSYVIPDL-APSAVSGMIFASAIFFLSYMGFGVITNASEHIENPK-KNVPRA 224 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---C--GGGTSCCC-SHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc---C--hhhcCCCC-CCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcc-cchhHH
Confidence 4444322222222222222211 1 11122222 234566788889999999999999999999999998 779999
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhcCCCCchhhhcCCccc--c--CcccchHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 011265 308 GRLTTILCIVVYSSTAISGYLLFGKDTESDVLTNFDKD--L--GIGYSTALNYIVRVGYIFHLILVFPVVHFSLRQTVDA 383 (490)
Q Consensus 308 ~~~~~~~~~~~Y~~~g~~gy~~fG~~~~~~il~~~~~~--~--~~~~~~~~~~~~~~~~~i~~~~~~pl~~~~~~~~~~~ 383 (490)
+..+..++.++|.+..+......+.+ ++..+-+.. . ....+++...+..+...+..+.+..-..+...+.+..
T Consensus 225 i~~~~~~~~~~y~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a 301 (444)
T 3gia_A 225 IFISILIVMFVYVGVAISAIGNLPID---ELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYS 301 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCHH---HHHHTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHH---HHhcccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887766555421 111110000 0 0000012223333334444444433333333333332
Q ss_pred h----hccCCCCc--cccchhhHHHHHHHHHHHHHHHhhcCchhHHHHHhhhhhhhhHHHhhhHHHHHHhhcCC
Q 011265 384 L----FFEGSAPL--LESRKRSLALTVVLLVLIYFGSTMIPSIWTAFKFTGATTAVSLGFIFPPLVALRLRKEG 451 (490)
Q Consensus 384 ~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ia~~~p~~~~i~~l~Ga~~~~~~~~ilP~~~~~~~~~~~ 451 (490)
. ..++.-.+ .....+-+.... +++.++.. ..+++.+.++.+ .+..+.|.++.+.++++++++
T Consensus 302 ~a~dg~lP~~f~~~~~~~P~~a~~~~~---~~~~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~r~~~ 369 (444)
T 3gia_A 302 LAKDGELPEFFERKVWFKSTEGLYITS---ALGVLFAL-LFNMEGVASITS--AVFMVIYLFVILSHYILIDEV 369 (444)
T ss_dssp HHHHSSCCSSCCTTSCCSCTHHHHHHH---HHHHHHHH-HSCHHHHHHHHH--HHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHCCCCCHHHhCCCCCCCcHHHHHHH---HHHHHHHH-HcCHHHHHHHHH--HHHHHHHHHHHHHHHHhhhcC
Confidence 2 11211100 011111122111 22222222 246788888755 456788999999998887654
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.49 E-value=2.2e-11 Score=125.50 Aligned_cols=245 Identities=14% Similarity=0.103 Sum_probs=139.8
Q ss_pred CCCCCchHHHHHHHHHHhHhhhhchHHHHHHHhCHHHHHHHHHHHHHHH-HHHHHHHHHHhh--hcCCCCHHHHHHHhcC
Q 011265 71 SNEGSGVAGAVFNLTTTVIGAGIMALPAAMKVLGLAVGFVLIIFMGILS-EVSVELLVRFSV--LCKATSYGEVVQYALG 147 (490)
Q Consensus 71 ~~~~~s~~~~~~~l~~~~iG~GiL~lP~af~~~G~~~g~i~l~~~~~~~-~~s~~~l~~~~~--~~~~~~y~~l~~~~~G 147 (490)
.+|+.+.++.+...++.++| +.++|. ....|.. +++..++.+++. ......+.|... +.+.......+++.+|
T Consensus 9 ~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~-~~~~~~i~~~~~~l~~al~~ael~s~~~~P~GG~y~~~~~~~g 84 (511)
T 4djk_A 9 KAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFS-LVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLG 84 (511)
T ss_dssp ---CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTH-HHHHHHHHHHHTHHHHHHHHHHHHTTSCC---CHHHHHHHHHC
T ss_pred cCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHcccccCCCCChhhhHHhhcC
Confidence 45689999999999999986 567775 4667742 333333333333 236677777665 4336677788899999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchhhccCcccchhHHHHHHHHHHHHhccccccchhhhhhhh
Q 011265 148 RPAKILSEICIILNNAGVLVVYLIIVGDVMSGSLHHTGVFDQWLGKGMWDHRKLLILIVLVVFLAPLCALDRIESLSMSS 227 (490)
Q Consensus 148 ~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~l~~l~~~s 227 (490)
|+.+++..+...+.......++....++.+.....+ +.. ....|.. ..+.+. +++++-....+..+....++
T Consensus 85 ~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~-~~~~~~~--~~~~~~-~~~~~~~in~~g~~~~~~~~ 156 (511)
T 4djk_A 85 PRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKW----PAL-NEDPITK--TIAALI-ILWALALTQFGGTKYTARIA 156 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTC----GGG-TSCSSHH--HHHHHH-HHHHHHHHHHTCSSSHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----ccc-ccCcHHH--HHHHHH-HHHHHHHHHHhChHHHHHHH
Confidence 999999888887777666556655555555432211 111 1111211 111111 11222223333344444444
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHhhcCCC-----CCCCCCCCCCCchhhhhHHhhhhhhhhhhhhhcchHHHHHhcccCCc
Q 011265 228 AASVALAVV-FVVVCFFIAFIKLVEGKL-----DPPRMSPDFGSKKAILDLLVVIPIMTNAYVCHFNVQPIYNELEGRTP 301 (490)
Q Consensus 228 ~~~~~~~~~-~~~i~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~~~~~~faf~~~~~~~~i~~~m~~p~~ 301 (490)
.+..+..++ .+++.++..+.....++. +.....|+... .+.+.++...+|+|.+........+|+|||+
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~- 231 (511)
T 4djk_A 157 KVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSK----VGTLVVFVAFILSYMGVEASATHVNEMSNPG- 231 (511)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCTTS----TTTTTTHHHHHHHHTTGGGGTGGGSSSSCCT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCccc----chHHHHHHHHHHHHhhHHHHHHHHHhccCcc-
Confidence 443221111 111111111221111111 11112222211 2234567788999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhHHHhhcCC
Q 011265 302 QKMNHVGRLTTILCIVVYSSTAISGYLLFGK 332 (490)
Q Consensus 302 ~~~~~~~~~~~~~~~~~Y~~~g~~gy~~fG~ 332 (490)
|+.+|++..+..++.++|++..+......++
T Consensus 232 k~ip~ai~~~~~~~~~~y~~~~~~~~~~~~~ 262 (511)
T 4djk_A 232 RDYPLAMLLLMVAAICLSSVGGLSIAMVIPG 262 (511)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHeecCH
Confidence 8899999999999999999998877766654
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.84 E-value=5.4e-06 Score=84.47 Aligned_cols=333 Identities=9% Similarity=0.003 Sum_probs=172.1
Q ss_pred CCCCchHHHHHHHHHHhHhhhhchHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHhcCCch
Q 011265 72 NEGSGVAGAVFNLTTTVIGAGIMALPAAMKV-LGLAVGFVLIIFMGILSEVSVELLVRFSVLCKATSYGEVVQYALGRPA 150 (490)
Q Consensus 72 ~~~~s~~~~~~~l~~~~iG~GiL~lP~af~~-~G~~~g~i~l~~~~~~~~~s~~~l~~~~~~~~~~~y~~l~~~~~G~~~ 150 (490)
+|+.++++-+..-++..++.+.+.+...+.. .++.-+++.+++..++...-+.+......+.+.. +.++.+..||+++
T Consensus 24 ~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~~~Gl~-~~v~~R~~FG~~G 102 (501)
T 2jln_A 24 ERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGIN-FTVAARMPFGIRG 102 (501)
T ss_dssp GCCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCC-HHHHTTTTSCTTT
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCCC-hhhhhHhhcchhH
Confidence 4567888888878888887777777655554 2356666666666666666666666666666555 9999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchhhccCcccchhHHHHHHHHHHHHhccccccchhhhhhhhHHH
Q 011265 151 KILSEICIILNNAGVLVVYLIIVGDVMSGSLHHTGVFDQWLGKGMWDHRKLLILIVLVVFLAPLCALDRIESLSMSSAAS 230 (490)
Q Consensus 151 ~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~l~~l~~~s~~~ 230 (490)
..+..++..+.+.|-........++.+...+. ..++.. ..+...++..++.+++.... ++.+++...+.
T Consensus 103 s~i~~ll~~i~~igw~~v~~~~gg~al~~~~~------~~~g~~----~~~v~~~i~~~l~~~~~~~G-~~~i~~~~~~~ 171 (501)
T 2jln_A 103 SLIPITLKALLSLFWFGFQTWLGALALDEITR------LLTGFT----NLPLWIVIFGAIQVVTTFYG-ITFIRWMNVFA 171 (501)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHCCC----CHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCcc----hHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHH
Confidence 99999999999888888888888877755221 111111 11222222333444544333 66666666666
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCC--CCCCCCCCCCCchhhhhHHhhhhh-hhhhhhhhcchHHHHHhcccCCc---c--
Q 011265 231 VALAVVFVVVCFFIAFIKLVEGKL--DPPRMSPDFGSKKAILDLLVVIPI-MTNAYVCHFNVQPIYNELEGRTP---Q-- 302 (490)
Q Consensus 231 ~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~-~~faf~~~~~~~~i~~~m~~p~~---~-- 302 (490)
....++.++...+..+... +. .+....+.. ...+.+..++.. +.+.-....+.+.+.+.+|+++. |
T Consensus 172 ~p~~~i~~i~~~~~~l~~~---g~~~~~~~~~~~~---~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~~~~~~~~~~~~ 245 (501)
T 2jln_A 172 SPVLLAMGVYMVYLMLDGA---DVSLGEVMSMGGE---NPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQ 245 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHH---TCCHHHHTTCCCS---SCCSCHHHHHHHHHTTTHHHHTTTHHHHTTBCCCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc---CCcchhhhccCCc---cchHHHHHHHHHHHHHHHHHHhccCcccccCCCCccccccch
Confidence 5433333322222222111 11 000001101 111223333333 22333445778999999988882 0
Q ss_pred -----chhHHHHHHHHHHHHHHHHHHhHHHhhcCCCCchhhhcC-CccccCcccchHHHHHHH-HHHHHHHHHhhh-hhh
Q 011265 303 -----KMNHVGRLTTILCIVVYSSTAISGYLLFGKDTESDVLTN-FDKDLGIGYSTALNYIVR-VGYIFHLILVFP-VVH 374 (490)
Q Consensus 303 -----~~~~~~~~~~~~~~~~Y~~~g~~gy~~fG~~~~~~il~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~p-l~~ 374 (490)
+..+....+..+...+..++|+......+......++.. ++.. ..+..+.- +.+.+..+.+-- -..
T Consensus 246 ~~~~~~~~~g~~lG~~i~~~~~~~lG~~~~~~~~~~dp~~~l~~~l~~~------~~~~~~~~~~~~~la~i~tn~~~n~ 319 (501)
T 2jln_A 246 TKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGV------SIPMAILFQVFVLLATWSTNPAANL 319 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHTCC------CHHHHHHHHHHHHHHHHTTHHHHHT
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHhccc------hHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 033344455566666666666654433332222223322 1111 01122222 333444433333 256
Q ss_pred hHHHHHHHHhhccCCCCccccchhhHHHHHHHHHHHHHHHhhc--CchhHHHHHhhhhhhhhHH
Q 011265 375 FSLRQTVDALFFEGSAPLLESRKRSLALTVVLLVLIYFGSTMI--PSIWTAFKFTGATTAVSLG 436 (490)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~--p~~~~i~~l~Ga~~~~~~~ 436 (490)
++....+.+.. ++. .++++... +..+++++++... ..+..++++.|.+......
T Consensus 320 ys~~~~l~~~~-~~~----i~~~~~~~---i~~vi~~~i~~~~~~~~f~~FL~~lg~~l~P~~g 375 (501)
T 2jln_A 320 LSPAYTLCSTF-PRV----FTFKTGVI---VSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAG 375 (501)
T ss_dssp HHHHHHHHHHS-TTT----CCHHHHHH---HHHHHHHHTCGGGTHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHhC-ccc----cchhHHHH---HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 77776777653 221 01222221 2223333343332 2355566666665555444
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=98.10 E-value=0.013 Score=59.92 Aligned_cols=148 Identities=13% Similarity=0.085 Sum_probs=79.6
Q ss_pred CCCCCchHHHHHHHHHHhHhhh-hchHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHhcCCc
Q 011265 71 SNEGSGVAGAVFNLTTTVIGAG-IMALPAAMKVLGLAVGFVLIIFMGILSEVSVELLVRFSVLCKATSYGEVVQYALGRP 149 (490)
Q Consensus 71 ~~~~~s~~~~~~~l~~~~iG~G-iL~lP~af~~~G~~~g~i~l~~~~~~~~~s~~~l~~~~~~~~~~~y~~l~~~~~G~~ 149 (490)
..|+.+++...+.+..+.+++. ++++|....+.|+......+.. ++.....+..+.+..++.+..|..|.-++-||++
T Consensus 18 aGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~~-~~~~~i~~~~~~p~~~~~~~~T~~e~l~~Rfg~~ 96 (530)
T 3dh4_A 18 AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKK 96 (530)
T ss_dssp CCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHHH-HHHHHHHHHHTHHHHHHTTCCSHHHHHHHHTCHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCccHHHHHHHHcCcH
Confidence 4568889988888888877665 4899977777886432211111 1111122333344456778999999999999999
Q ss_pred hhHHHHHHHHH-HHHHHHHHHHHhhcccccccccccccchhhccCcccchhHHHHHHHHHHHHhccccccchhhhhhhhH
Q 011265 150 AKILSEICIIL-NNAGVLVVYLIIVGDVMSGSLHHTGVFDQWLGKGMWDHRKLLILIVLVVFLAPLCALDRIESLSMSSA 228 (490)
Q Consensus 150 ~~~~~~~~~~~-~~~g~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~l~~l~~~s~ 228 (490)
.+.+..+...+ +.+..+.+-+...+..++. .++ + +.....++..+++.......-++...+...
T Consensus 97 ~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~----------~~G---i--~~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~ 161 (530)
T 3dh4_A 97 LKTILAVFWISLYIFVNLTSVLYLGGLALET----------ILG---I--PLMYSILGLALFALVYSIYGGLSAVVWTDV 161 (530)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH----------HTT---C--CHHHHHHHHHHHHHHTTC------CCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhC---C--CHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 88877765443 2222222222222322222 111 1 122223333345555666666777777777
Q ss_pred HHHHHH
Q 011265 229 ASVALA 234 (490)
Q Consensus 229 ~~~~~~ 234 (490)
+-.++.
T Consensus 162 iQ~~im 167 (530)
T 3dh4_A 162 IQVFFL 167 (530)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666433
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.68 E-value=0.037 Score=57.32 Aligned_cols=87 Identities=13% Similarity=0.063 Sum_probs=53.8
Q ss_pred CCCCchHHHHHHHHHHhHhhhh-chHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHhcCCch
Q 011265 72 NEGSGVAGAVFNLTTTVIGAGI-MALPAAMKVLGLAVGFVLIIFMGILSEVSVELLVRFSVLCKATSYGEVVQYALGRPA 150 (490)
Q Consensus 72 ~~~~s~~~~~~~l~~~~iG~Gi-L~lP~af~~~G~~~g~i~l~~~~~~~~~s~~~l~~~~~~~~~~~y~~l~~~~~G~~~ 150 (490)
.|+.+++...+.+..+.+++.. ++.|....+.|+......+.. ++........+.+-.++.+..|..|.-++-||++.
T Consensus 48 GR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~T~~e~l~~Rfg~~~ 126 (593)
T 2xq2_A 48 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKL 126 (593)
T ss_dssp ---CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHHH-HHHHHHHHHTHHHHHHHTTCCSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCCCCcHHHHHHHccCch
Confidence 4677888888888777666554 789977667786422111111 11111122334444467789999999999999988
Q ss_pred hHHHHHHHH
Q 011265 151 KILSEICII 159 (490)
Q Consensus 151 ~~~~~~~~~ 159 (490)
+.+..+...
T Consensus 127 ~~~~ai~~l 135 (593)
T 2xq2_A 127 KTILAVFWI 135 (593)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877765544
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=94.38 E-value=4.8 Score=40.48 Aligned_cols=56 Identities=14% Similarity=0.246 Sum_probs=36.9
Q ss_pred CCchHHHHHHHHHHhHhhh-hchHHHHHHH-hC---HHHHHHHHHHHHHHHHHHHHHHHHH
Q 011265 74 GSGVAGAVFNLTTTVIGAG-IMALPAAMKV-LG---LAVGFVLIIFMGILSEVSVELLVRF 129 (490)
Q Consensus 74 ~~s~~~~~~~l~~~~iG~G-iL~lP~af~~-~G---~~~g~i~l~~~~~~~~~s~~~l~~~ 129 (490)
=.|..+-++..+...+|.| +.=.||-..+ +| +++=++++++.++=-.+.=..+.|.
T Consensus 8 W~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~ 68 (519)
T 2a65_A 8 WATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRY 68 (519)
T ss_dssp CSCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4577888999999999999 7889976555 44 4444444444444444444455553
No 8
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=54.73 E-value=1.4e+02 Score=28.60 Aligned_cols=47 Identities=21% Similarity=0.437 Sum_probs=39.6
Q ss_pred CCCHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 011265 135 ATSYGEVVQYALGRPAKILSEICIILNNAGVLVVYLIIVGDVMSGSL 181 (490)
Q Consensus 135 ~~~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~~~ 181 (490)
...+.++.+..+|+++..++.+...+..++...++....++.+....
T Consensus 259 ~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a 305 (445)
T 3l1l_A 259 ASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAA 305 (445)
T ss_dssp TCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999888888887766533
No 9
>3tx3_A Uncharacterized protein involved in cysteine BIOS; structural genomics, PSI-biology, NEW YORK consortium on MEM protein structure, nycomps; HET: LDA; 2.30A {Idiomarina loihiensis}
Probab=34.67 E-value=2.4e+02 Score=24.91 Aligned_cols=34 Identities=6% Similarity=0.031 Sum_probs=22.3
Q ss_pred hcccCCccchhHHHHHHHHHHHHHHHHHHhHHHhhcC
Q 011265 295 ELEGRTPQKMNHVGRLTTILCIVVYSSTAISGYLLFG 331 (490)
Q Consensus 295 ~m~~p~~~~~~~~~~~~~~~~~~~Y~~~g~~gy~~fG 331 (490)
.+.+| ++++.+....++..++|.......+..++
T Consensus 23 ~i~~p---~lr~~vl~Pllinl~L~~~~~~~~~~~~~ 56 (249)
T 3tx3_A 23 LIRTK---GLRRYVVVPILTNLILFSLAFTWLYGEVD 56 (249)
T ss_dssp HHTST---TTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455 47888888888888887666544444444
No 10
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=34.56 E-value=3.3e+02 Score=26.48 Aligned_cols=32 Identities=6% Similarity=-0.034 Sum_probs=23.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 011265 148 RPAKILSEICIILNNAGVLVVYLIIVGDVMSG 179 (490)
Q Consensus 148 ~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~ 179 (490)
++...++.+...+..++...++....++.+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sR~l~a 318 (511)
T 4djk_A 287 EWTVRVISALLLLGVLAEIASWIVGPSRGMYV 318 (511)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTHHHHHTCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567777777777788777777777777665
No 11
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=28.28 E-value=1.6e+02 Score=28.23 Aligned_cols=44 Identities=11% Similarity=0.079 Sum_probs=34.5
Q ss_pred CCHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 011265 136 TSYGEVVQYALGRPAKILSEICIILNNAGVLVVYLIIVGDVMSG 179 (490)
Q Consensus 136 ~~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~ 179 (490)
....++.+..+|+++..++.+...+..++...+.....++.+..
T Consensus 258 ~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a 301 (444)
T 3gia_A 258 NALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYS 301 (444)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHH
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667788888888888888888888888888877776666654
No 12
>4b4a_A TATC, SEC-independent protein translocase protein TATC; transport protein, TAT secretion system, protein translocati; HET: LMN; 3.50A {Aquifex aeolicus}
Probab=22.38 E-value=4e+02 Score=23.45 Aligned_cols=116 Identities=14% Similarity=0.229 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHhhccCCCCccccchh-hHHHHHHHHHHHHHHHhh--------------
Q 011265 352 TALNYIVRVGYIFHLILVFPVVHFSLRQTVDALFFEGSAPLLESRKR-SLALTVVLLVLIYFGSTM-------------- 416 (490)
Q Consensus 352 ~~~~~~~~~~~~i~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ia~~-------------- 416 (490)
+.+..-.++.....+..+.|...+-.-.-+..-+.++++ +..+ .+.....+.......+.+
T Consensus 59 e~f~~~lkvs~~~g~~~a~P~ilyQiw~Fi~PgLy~~Er----r~~~~~~~~s~~LF~~G~~f~Yf~v~P~~~~Fl~~~~ 134 (249)
T 4b4a_A 59 EPLFILIKISLAVGFIIASPVILYQFWRFIEPALYSHEK----RAFIPLLLGSILLFMLGALFAYFIVLPLALKFLLGLG 134 (249)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCT----TTTHHHHHHHHHHHHHHHHHHHHTHHHHHHHTTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 578888999999999999999887554444433333332 2222 222233333333333332
Q ss_pred ------cC--chhHHHHHhhhhh-hhhHHHhhhHHHHHHhhcCC---CCCChhhHHHHHHHHHHHHH
Q 011265 417 ------IP--SIWTAFKFTGATT-AVSLGFIFPPLVALRLRKEG---PGLSLGEKFLSGLMLVLAIV 471 (490)
Q Consensus 417 ------~p--~~~~i~~l~Ga~~-~~~~~~ilP~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~ 471 (490)
.| +.++.++++-.+. ...++|-+|.++.+-.+-+- +..++++|.....+++++.+
T Consensus 135 ~~~i~~~~~~~i~~Yl~fv~~l~l~fGl~FelPvi~~~L~~~Giv~~~~l~~~Rr~~iv~~~v~aAi 201 (249)
T 4b4a_A 135 FTQLLATPYLSVDMYISFVLKLVVAFGIAFEMPIVLYVLQKAGVITPEQLASFRKYFIVIAFVIGAI 201 (249)
T ss_dssp STTSSSSTTEEHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHhHHHHHHHHHHHHH
Confidence 13 4555555544332 34577889998887644221 12333455444444444443
Done!