BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011267
(489 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FG2|P Chain P, Crystal Structure Of Ferredoxin Reductase For The Cyp199a2
System From Rhodopseudomonas Palustris
Length = 404
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 165/344 (47%), Gaps = 28/344 (8%)
Query: 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLP 112
+ V++ G AG+ + GR+ +++ E + PY+RP L+K YL
Sbjct: 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYL----------- 50
Query: 113 GFHTCVGSGGERQT----PE-WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLI 167
SGG+ + PE +++++ IE+I D + SID E + L+ SG ++YG L+
Sbjct: 51 ------KSGGDPNSLMFRPEKFFQDQAIELI-SDRMVSIDREGRKLLLASGTAIEYGHLV 103
Query: 168 VATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAV 227
+ATG +R + LP V Y+R + +++ L + K +IG+E AA A
Sbjct: 104 LATGAR-NRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATAR 162
Query: 228 GWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAV 287
L+ ++ ++ R+ TP ++ + + G++ + G + A D RV V
Sbjct: 163 AKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIR-MHYGVRATEIAAEGD-RVTGV 220
Query: 288 KLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAF 347
L DG+T+ D +V+G+G P V + GI VD Q T P I AIGD A F
Sbjct: 221 VLSDGNTLPCDLVVVGVGVIPNVE-IAAAAGLPTAAGIIVDQQLLTSDPHISAIGDCALF 279
Query: 348 PLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYS 391
+ T RVE V +A A+ C+ A L+ YD P+F+S
Sbjct: 280 ESVRFGETMRVESVQNATDQAR-CVAARLTGDAKPYDGYPWFWS 322
>pdb|3LB8|A Chain A, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
pdb|3LB8|B Chain B, Crystal Structure Of The Covalent Putidaredoxin Reductase-
Putidaredoxin Complex
Length = 436
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 166/350 (47%), Gaps = 19/350 (5%)
Query: 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKP 108
N N VIVG G A A G +G + +V P+ P L+K YL
Sbjct: 1 NANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYL----AGK 55
Query: 109 ARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIV 168
A + +TP+ Y + I+++ VT+I+ ++Q +I + G+ L Y L++
Sbjct: 56 ATAESLYL--------RTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVL 107
Query: 169 ATGCTASRFPEKIG--GYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAA 226
ATG P G G Y+R + DA+ + L + YIG+EVAA A
Sbjct: 108 ATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATA 167
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSD-GRVA 285
+ + T++ +L+R+ P ++ YE L+++ GV ++ G + E +D +V
Sbjct: 168 IKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVD-IRTGTQVCGFEMSTDQQKVT 226
Query: 286 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVA 345
AV EDG+ + AD ++ GIG P GL GI ++ +T P I A+GD A
Sbjct: 227 AVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NGIVINEHMQTSDPLIMAVGDCA 285
Query: 346 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFE 395
F ++YDR R+E V +A + A+ I A+L + + P+F+S +E
Sbjct: 286 RFHSQLYDRWVRIESVPNALEQARK-IAAILCGKVPRDEAAPWFWSDQYE 334
>pdb|1Q1R|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1R|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|A Chain A, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
pdb|1Q1W|B Chain B, Crystal Structure Of Putidaredoxin Reductase From
Pseudomonas Putida
Length = 431
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 166/350 (47%), Gaps = 19/350 (5%)
Query: 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKP 108
N N VIVG G A A G +G + +V P+ P L+K YL
Sbjct: 2 NANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYL----AGK 56
Query: 109 ARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIV 168
A + +TP+ Y + I+++ VT+I+ ++Q +I + G+ L Y L++
Sbjct: 57 ATAESLYL--------RTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVL 108
Query: 169 ATGCTASRFPEKIG--GYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAA 226
ATG P G G Y+R + DA+ + L + YIG+EVAA A
Sbjct: 109 ATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATA 168
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSD-GRVA 285
+ + T++ +L+R+ P ++ YE L+++ GV ++ G + E +D +V
Sbjct: 169 IKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVD-IRTGTQVCGFEMSTDQQKVT 227
Query: 286 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVA 345
AV EDG+ + AD ++ GIG P GL GI ++ +T P I A+GD A
Sbjct: 228 AVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NGIVINEHMQTSDPLIMAVGDCA 286
Query: 346 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFE 395
F ++YDR R+E V +A + A+ I A+L + + P+F+S +E
Sbjct: 287 RFHSQLYDRWVRIESVPNALEQARK-IAAILCGKVPRDEAAPWFWSDQYE 335
>pdb|3LXD|A Chain A, Crystal Structure Of Ferredoxin Reductase Arr From
Novosphingobium Aromaticivorans
Length = 415
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 171/357 (47%), Gaps = 28/357 (7%)
Query: 77 DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFH-TCVGSGGERQTPEWYKEKGI 135
+GR+ ++ +E PYERP L+K YL AR F C+ + +++++K +
Sbjct: 34 EGRVLVIGREPEIPYERPPLSKEYL-------AREKTFERICI------RPAQFWEDKAV 80
Query: 136 EMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVA 195
EM V S+D T+ G ++YG LI ATG R +G L GVH +R
Sbjct: 81 EMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRL-SCVGADLAGVHAVRTKE 139
Query: 196 DADALISSLEK-AKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254
DAD L++ L+ AK YIG+E AA + ++ T++ +L R+ +L++
Sbjct: 140 DADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEF 199
Query: 255 YEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE 314
Y+ ++ +GV + GA++ +E G +V V+++DGS I AD +++GIG P V
Sbjct: 200 YQAEHRAHGVDL-RTGAAMDCIE-GDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALI 257
Query: 315 RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA-RVEHVDHARQSAQHCIK 373
G S G+ VD RT + ++AIGD AA D R+E V +A A K
Sbjct: 258 SAG-ASGGNGVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAK 316
Query: 374 ALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETIEIGNFDPKIATFWI 430
+ A Y P+F+S ++ + Q G + G + DP +F +
Sbjct: 317 DICGAPV-PYKATPWFWSNQYDLK-------LQTVGLSTGHDNAVLRGDPATRSFSV 365
>pdb|3EF6|A Chain A, Crystal Structure Of Toluene 2,3-Dioxygenase Reductase
pdb|4EMI|A Chain A, Toluene Dioxygenase Reductase In Reduced State In Complex
With Nad+
pdb|4EMJ|A Chain A, Complex Between The Reductase And Ferredoxin Components Of
Toluene Dioxygenase
Length = 410
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 19/299 (6%)
Query: 56 IVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFH 115
I+G G A+ G +GR+ ++ E + PY+RP+L+K L ++P L
Sbjct: 7 IIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPIL---- 61
Query: 116 TCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175
+WY E I+M+ VT++D++ +T+ + G L ++++ATG A
Sbjct: 62 ---------AEADWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRA- 111
Query: 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTI 235
R G LPGV +R D L S A + IG EVA A L TI
Sbjct: 112 RTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTI 171
Query: 236 IFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTI 295
+ + LL R+ + L + GV+ V++G + +G++ V DG +
Sbjct: 172 LEAGDELLVRVLGRRIGAWLRGLLTELGVQ-VELGTGVVGFSG--EGQLEQVMASDGRSF 228
Query: 296 DADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354
AD+ +I +GA+P + GL G I VD T G+FA+GDVA++PL+ R
Sbjct: 229 VADSALICVGAEPADQLARQAGLACDRGVI-VDHCGATLAKGVFAVGDVASWPLRAGGR 286
>pdb|1D7Y|A Chain A, Crystal Structure Of Nadh-Dependent Ferredoxin Reductase,
Bpha4
pdb|1F3P|A Chain A, Ferredoxin Reductase (Bpha4)-Nadh Complex
pdb|2GQW|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2GR0|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (oxidized
Form, Nad+ Complex)
pdb|2GR1|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Hydroquinone)
pdb|2GR2|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
pdb|2YVF|A Chain A, Crystal Structure Of Ferredoxin Reductase Bpha4
(Hydroquinone)
pdb|2YVG|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4
(Blue-Semiquinone)
pdb|2YVJ|A Chain A, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
pdb|2YVJ|P Chain P, Crystal Structure Of The Ferredoxin-Ferredoxin Reductase
(Bpha3-Bpha4)complex
Length = 408
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 30/333 (9%)
Query: 63 AGYAARTFV---EHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVG 119
AG A+ +FV G + +V EA PY+RP L+K ++ D + RL C
Sbjct: 15 AGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRL----DC-- 68
Query: 120 SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPE 179
++ PE +E + S D + T+ + G+ L YG+L++ATG P
Sbjct: 69 ----KRAPE------VEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPT 118
Query: 180 KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPE 239
G +P VH +R + DA + + L + IG+E+AA A + +++ +
Sbjct: 119 LQGATMP-VHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQ 177
Query: 240 NHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRV-AAVKLEDGSTIDAD 298
L+ R +LA + + GV E G V V L+DG+ I AD
Sbjct: 178 PRLMSRAAPATLADFVARYHAAQGVDL--------RFERSVTGSVDGVVLLDDGTRIAAD 229
Query: 299 TIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 358
+V+GIG + GL GI VD RT P ++A+GDV + R R+
Sbjct: 230 MVVVGIGVLANDALARAAGLACD-DGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERI 288
Query: 359 EHVDHARQSAQHCIKALLSAQTHTYDYLPYFYS 391
E +A+ + L+ Y LP+++S
Sbjct: 289 ETWSNAQNQGIAVARHLVDPTAPGYAELPWYWS 321
>pdb|2GR3|A Chain A, Crystal Structure Of Ferredoxin Reductase, Bpha4 (Oxidized
Form)
Length = 408
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 30/333 (9%)
Query: 63 AGYAARTFV---EHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVG 119
AG A+ +FV G + +V EA PY+RP L+K ++ D + RL C
Sbjct: 15 AGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRL----DC-- 68
Query: 120 SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPE 179
++ PE +E + S D + T+ + G+ L YG+L++ATG P
Sbjct: 69 ----KRAPE------VEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPT 118
Query: 180 KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPE 239
G +P VH +R + DA + + L + IG+E+AA A + +++ +
Sbjct: 119 LQGATMP-VHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQ 177
Query: 240 NHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRV-AAVKLEDGSTIDAD 298
L+ R +LA + + GV E G V V L+DG+ I AD
Sbjct: 178 PRLMSRAAPATLADFVARYHAAQGVDL--------RFERSVTGSVDGVVLLDDGTRIAAD 229
Query: 299 TIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 358
+V+GIG + GL GI VD RT P ++A+GDV + R R+
Sbjct: 230 MVVVGIGVLANDALARAAGLACD-DGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERI 288
Query: 359 EHVDHARQSAQHCIKALLSAQTHTYDYLPYFYS 391
E +A+ + L+ Y LP+++S
Sbjct: 289 ETWSNAQNQGIAVARHLVDPTAPGYAELPWYFS 321
>pdb|4FDC|B Chain B, Crystal Structure Of The E493v Mutant Of Human Apoptosis
Inducing Factor (Aif)
Length = 514
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 163/373 (43%), Gaps = 50/373 (13%)
Query: 79 RLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGER----QTPEWY---- 130
R+ IVS++ PY RP L+K F D + F +G ER Q P +Y
Sbjct: 56 RVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQW--NGKERSIYFQPPSFYVSAQ 113
Query: 131 -----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGG 183
+ G+ ++ V +D+ + N G + Y ++ATG T ++ G
Sbjct: 114 DLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGA 173
Query: 184 YLPG-VHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWK---LDTTII--F 237
+ R + D +L + K ++G E+ A A+G K L T +I F
Sbjct: 174 EVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSEL-ACALGRKARALGTEVIQLF 232
Query: 238 PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDA 297
PE + ++ L+ + ++ GVK V A ++++ S G++ +KL+DG ++
Sbjct: 233 PEKGNMGKILPEYLSNWTMEKVRREGVK-VMPNAIVQSVGV-SSGKL-LIKLKDGRKVET 289
Query: 298 DTIVIGIGAKPTVSPFERVGL--NSSVGGIQVDGQFRTRMPGIFAIGDVAAF-PLKMYDR 354
D IV +G +P V + GL +S GG +V+ + + R I+ GD A F +K+ R
Sbjct: 290 DHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARS-NIWVAGDAACFYDIKLGRR 348
Query: 355 TARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE 414
RVEH DHA + L+ + T PY++ +F W G +VG
Sbjct: 349 --RVEHHDHA------VVSGRLAGENMTGAAKPYWHQSMF----------WSDLGPDVG- 389
Query: 415 TIEIGNFDPKIAT 427
+ IG D + T
Sbjct: 390 YVAIGLVDSSLPT 402
>pdb|3IWA|A Chain A, Crystal Structure Of A Fad-Dependent Pyridine
Nucleotide-Disulphide Oxidoreductase From Desulfovibrio
Vulgaris
Length = 472
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 14/234 (5%)
Query: 125 QTPEWYK-EKGIEMIYQDPVTSID-----IEKQTLITNSGKLLKYGSLIVATGCTASRFP 178
+ PE+++ K +E + + +ID +E + L T + LKY L++A G A+R P
Sbjct: 70 RDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPP 129
Query: 179 EKIGGYLPGVHYIRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAA-AVGWKLDTTI 235
+ G L GV + ++ +A+ + ++ + K +IG+E+A + A W +DTT+
Sbjct: 130 VE-GMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTV 188
Query: 236 IFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTI 295
+ + ++ + SL+Q ++N V V G + LE G +G+VA V + D T+
Sbjct: 189 VELADQIMPGFTSKSLSQMLRHDLEKNDV-VVHTGEKVVRLE-GENGKVARV-ITDKRTL 245
Query: 296 DADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFP 348
DAD +++ G P GL G I VD + RT P IFA GD P
Sbjct: 246 DADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIP 299
>pdb|1GV4|A Chain A, Murine Apoptosis-Inducing Factor (Aif)
pdb|1GV4|B Chain B, Murine Apoptosis-Inducing Factor (Aif)
Length = 528
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 154/359 (42%), Gaps = 49/359 (13%)
Query: 79 RLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGER----QTPEWY---- 130
R+ IVS++ PY RP L+K F D + F +G ER Q P +Y
Sbjct: 75 RVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQW--NGKERSIYFQPPSFYVSAQ 132
Query: 131 -----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGG 183
+ G+ ++ V +D+ + N G + + ++ATG T ++ G
Sbjct: 133 DLPNIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTPRSLSAIDRAGA 192
Query: 184 YLPG-VHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWK-----LDTTIIF 237
+ R + D AL + K ++G E+ A A+G K ++ +F
Sbjct: 193 EVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSEL-ACALGRKSQASGIEVIQLF 251
Query: 238 PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDA 297
PE + ++ L+ + ++ GVK V A ++++ G G +KL+DG ++
Sbjct: 252 PEKGNMGKILPQYLSNWTMEKVKREGVK-VMPNAIVQSV--GVSGGRLLIKLKDGRKVET 308
Query: 298 DTIVIGIGAKPTVSPFERVGL--NSSVGGIQVDGQFRTRMPGIFAIGDVAAF-PLKMYDR 354
D IV +G +P V + GL +S GG +V+ + + R I+ GD A F +K+ R
Sbjct: 309 DHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAACFYDIKLGRR 367
Query: 355 TARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 413
RVEH DHA + L+ + T PY++ +F W G +VG
Sbjct: 368 --RVEHHDHA------VVSGRLAGENMTGAAKPYWHQSMF----------WSDLGPDVG 408
>pdb|3GD3|A Chain A, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|B Chain B, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|C Chain C, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
pdb|3GD3|D Chain D, Crystal Structure Of A Naturally Folded Murine Apoptosis
Inducing Factor
Length = 535
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 154/359 (42%), Gaps = 49/359 (13%)
Query: 79 RLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGER----QTPEWY---- 130
R+ IVS++ PY RP L+K F D + F +G ER Q P +Y
Sbjct: 80 RVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQW--NGKERSIYFQPPSFYVSAQ 137
Query: 131 -----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGG 183
+ G+ ++ V +D+ + N G + + ++ATG T ++ G
Sbjct: 138 DLPNIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTPRSLSAIDRAGA 197
Query: 184 YLPG-VHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWK-----LDTTIIF 237
+ R + D AL + K ++G E+ A A+G K ++ +F
Sbjct: 198 EVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSEL-ACALGRKSQASGIEVIQLF 256
Query: 238 PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDA 297
PE + ++ L+ + ++ GVK V A ++++ G G +KL+DG ++
Sbjct: 257 PEKGNMGKILPQYLSNWTMEKVKREGVK-VMPNAIVQSV--GVSGGRLLIKLKDGRKVET 313
Query: 298 DTIVIGIGAKPTVSPFERVGL--NSSVGGIQVDGQFRTRMPGIFAIGDVAAF-PLKMYDR 354
D IV +G +P V + GL +S GG +V+ + + R I+ GD A F +K+ R
Sbjct: 314 DHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAACFYDIKLGRR 372
Query: 355 TARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 413
RVEH DHA + L+ + T PY++ +F W G +VG
Sbjct: 373 --RVEHHDHA------VVSGRLAGENMTGAAKPYWHQSMF----------WSDLGPDVG 413
>pdb|3GD4|A Chain A, Crystal Structure Of The Reduced, Nad-Bound Form Of Murine
Apoptosis Inducing Factor
pdb|3GD4|B Chain B, Crystal Structure Of The Reduced, Nad-Bound Form Of Murine
Apoptosis Inducing Factor
Length = 511
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 154/359 (42%), Gaps = 49/359 (13%)
Query: 79 RLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGER----QTPEWY---- 130
R+ IVS++ PY RP L+K F D + F +G ER Q P +Y
Sbjct: 56 RVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLQFRQW--NGKERSIYFQPPSFYVSAQ 113
Query: 131 -----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGG 183
+ G+ ++ V +D+ + N G + + ++ATG T ++ G
Sbjct: 114 DLPNIENGGVAVLTGKKVVHLDVRGNMVKLNDGSQITFEKCLIATGGTPRSLSAIDRAGA 173
Query: 184 YLPG-VHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWK-----LDTTIIF 237
+ R + D AL + K ++G E+ A A+G K ++ +F
Sbjct: 174 EVKSRTTLFRKIGDFRALEKISREVKSITVIGGGFLGSEL-ACALGRKSQASGIEVIQLF 232
Query: 238 PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDA 297
PE + ++ L+ + ++ GVK V A ++++ G G +KL+DG ++
Sbjct: 233 PEKGNMGKILPQYLSNWTMEKVKREGVK-VMPNAIVQSV--GVSGGRLLIKLKDGRKVET 289
Query: 298 DTIVIGIGAKPTVSPFERVGL--NSSVGGIQVDGQFRTRMPGIFAIGDVAAF-PLKMYDR 354
D IV +G +P V + GL +S GG +V+ + + R I+ GD A F +K+ R
Sbjct: 290 DHIVTAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAACFYDIKLGRR 348
Query: 355 TARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 413
RVEH DHA + L+ + T PY++ +F W G +VG
Sbjct: 349 --RVEHHDHA------VVSGRLAGENMTGAAKPYWHQSMF----------WSDLGPDVG 389
>pdb|1M6I|A Chain A, Crystal Structure Of Apoptosis Inducing Factor (Aif)
Length = 493
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 49/359 (13%)
Query: 79 RLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGER----QTPEWY---- 130
R+ IVS++ PY RP L+K F D + F +G ER Q P +Y
Sbjct: 38 RVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQW--NGKERSIYFQPPSFYVSAQ 95
Query: 131 -----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGG 183
+ G+ ++ V +D+ + N G + Y ++ATG T ++ G
Sbjct: 96 DLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGA 155
Query: 184 YLPG-VHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWK---LDTTII--F 237
+ R + D +L + K ++G E+ A A+G K L T +I F
Sbjct: 156 EVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSEL-ACALGRKARALGTEVIQLF 214
Query: 238 PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDA 297
PE + ++ L+ + ++ GVK V A ++++ S G++ +KL+DG ++
Sbjct: 215 PEKGNMGKILPEYLSNWTMEKVRREGVK-VMPNAIVQSVGV-SSGKL-LIKLKDGRKVET 271
Query: 298 DTIVIGIGAKPTVSPFERVGL--NSSVGGIQVDGQFRTRMPGIFAIGDVAAF-PLKMYDR 354
D IV +G +P V + GL +S GG +V+ + + R I+ GD A F +K+ R
Sbjct: 272 DHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAACFYDIKLGRR 330
Query: 355 TARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG 413
RVEH DHA + L+ + T PY++ +F W G +VG
Sbjct: 331 --RVEHHDHA------VVSGRLAGENMTGAAKPYWHQSMF----------WSDLGPDVG 371
>pdb|1XHC|A Chain A, Nadh Oxidase /nitrite Reductase From Pyrococcus Furiosus
Pfu-1140779- 001
Length = 367
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 38/316 (12%)
Query: 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG 187
+WY+++GIE+ + ID ++ +IT G+ + Y +L++ATG A R P+ + G
Sbjct: 68 DWYRKRGIEIRLAEEAKLIDRGRKVVITEKGE-VPYDTLVLATGARA-REPQ-----IKG 120
Query: 188 VHY---IRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQ 244
Y +R + DAD + S+E + + +IG+E+A +I L
Sbjct: 121 KEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180
Query: 245 RLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGI 304
L+ + + ++ GVKF + + LEA +G L + I+ + I
Sbjct: 181 --LDEELSNMIKDMLEETGVKFF---LNSELLEANEEG-----VLTNSGFIEGKVKICAI 230
Query: 305 GAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 364
G P V R G+++ GI +D FRT ++AIGD A + + + A
Sbjct: 231 GIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIGDCAEY-------SGIIAGTAKA 282
Query: 365 RQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETIEIGNFDPK 424
+ +L + Y++ F S VF++ K+ G+ GE G +
Sbjct: 283 AMEQARVLADILKGEPRRYNF--KFRSTVFKF----GKLQIAIIGNTKGE----GKWIED 332
Query: 425 IATFWIDSGKLKGVLV 440
+ ++GK+ G +V
Sbjct: 333 NTKVFYENGKIIGAVV 348
>pdb|3CGC|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGC|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGE|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGE|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 135/307 (43%), Gaps = 38/307 (12%)
Query: 54 FVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE-----AYAPYERPALTKGYLFPLDKKP 108
+VI+GG A AA V + D +V+ E +YA P + G + +K
Sbjct: 39 YVIIGGDAAGMSAAMQIVRN---DENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLI 95
Query: 109 ARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL-----LKY 163
AR + + GI+ + VT +D EK+ + K Y
Sbjct: 96 AR--------------NVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSY 141
Query: 164 GSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE--KAKKXXXXXXXYIGME 221
L++ATG PE G L GVH ++ + DA+ ++ +LE K + IG+E
Sbjct: 142 DRLLIATGVRPV-MPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLE 200
Query: 222 VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEA-GS 280
+A V +I +H + ++ +A E +Y++ +++ + +N++A
Sbjct: 201 MAETFVELGKKVRMIERNDH-IGTIYDGDMA---EYIYKEADKHHIEILTN-ENVKAFKG 255
Query: 281 DGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIF 339
+ RV AV+ + G T AD +++ +G KP E + ++ G I+V+ +T + ++
Sbjct: 256 NERVEAVETDKG-TYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVY 314
Query: 340 AIGDVAA 346
A GD A
Sbjct: 315 AAGDCAT 321
>pdb|2CDU|A Chain A, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
pdb|2CDU|B Chain B, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
Length = 452
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 21/232 (9%)
Query: 126 TPEWYKEKGIEMIYQDPVTSIDIEKQT-----LITNSGKLLKYGSLIVATGCTASRFPEK 180
+PE G + + VT++D E +T LITN K Y LI+ TG + P
Sbjct: 64 SPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPP-- 121
Query: 181 IGGYLPG-----VHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTI 235
+PG V+ ++ DA L KAK YIG E+A A + +
Sbjct: 122 ----IPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNL 177
Query: 236 IFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTI 295
I +L + F + Y+ +GV V +G+ + E D + K DG I
Sbjct: 178 IDGHERVLYKYFDKEFTDILAKDYEAHGVNLV-LGSKVAAFEEVDDEIIT--KTLDGKEI 234
Query: 296 DADTIVIGIGAKPTVSPFE-RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAA 346
+D ++ IG +P + +V + + G I D + IFA GD AA
Sbjct: 235 KSDIAILCIGFRPNTELLKGKVAMLDN-GAIITDEYMHSSNRDIFAAGDSAA 285
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 28/225 (12%)
Query: 149 EKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208
E++ L+ +G+ L+ +++ATG +A P V Y R V +AL S E K
Sbjct: 116 ERKVLVEETGEELEARYILIATG-SAPLIPP-----WAQVDYERVVTSTEAL-SFPEVPK 168
Query: 209 KXXXXXXXYIGMEVAAAAVGW-KLDTTIIFPENHLLQRLFTPSL----AQRYEQLYQQNG 263
+ IG+E+ V W +L +I E + R+ P++ ++ E+++++ G
Sbjct: 169 RLIVVGGGVIGLELG---VVWHRLGAEVIVLE--YMDRIL-PTMDLEVSRAAERVFKKQG 222
Query: 264 VKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS--PFERVGLNSS 321
+ ++ G + + + G A V+LE G ++AD +++ +G +P E GL++
Sbjct: 223 LT-IRTGVRVTAVVPEAKG--ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTD 279
Query: 322 -VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT----ARVEHV 361
G I VD RTR+P I+AIGDV P+ + + A VEH+
Sbjct: 280 ERGRIPVDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHM 324
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 156 NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXX 215
+S + + + I+ATG SR E LP + + D+ ++ E K
Sbjct: 127 DSAQTYTFKNAIIATG---SRPIE-----LPNFKFSNRILDSTGALNLGEVPKSLVVIGG 178
Query: 216 XYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKN 275
YIG+E+ A + TI+ +L F +A ++ ++ GV+ V A K
Sbjct: 179 GYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKKKGVEVV-TNALAKG 236
Query: 276 LEAGSDGRVAAVKLE-DGSTIDADTIVIGIGAKPTVSPF--ERVGLN-SSVGGIQVDGQF 331
E DG + + TIDAD +++ +G +P E++G+ ++ G I+VD Q
Sbjct: 237 AEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQC 296
Query: 332 RTRMPGIFAIGDVAAFP 348
RT +P IFAIGD+ P
Sbjct: 297 RTSVPNIFAIGDIVPGP 313
>pdb|3CGB|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGB|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 16/232 (6%)
Query: 124 RQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL-----LKYGSLIVATGCTASRFP 178
R + + GI+ + VT +D EK+ + K Y L++ATG P
Sbjct: 97 RNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV-XP 155
Query: 179 EKIGGYLPGVHYIRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
E G L GVH ++ + DA+ ++ +LE K + IG+E A V I
Sbjct: 156 EWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEXAETFVELGKKVRXI 215
Query: 237 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEA-GSDGRVAAVKLEDGSTI 295
+H + ++ A E +Y++ +++ + +N++A + RV AV+ + G T
Sbjct: 216 ERNDH-IGTIYDGDXA---EYIYKEADKHHIEILTN-ENVKAFKGNERVEAVETDKG-TY 269
Query: 296 DADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAA 346
AD +++ +G KP E + ++ G I+V+ +T + ++A GD A
Sbjct: 270 KADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYXQTNVQDVYAAGDCAT 321
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 217 YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIK 274
Y+ +E A G LD T++ +L R F +A + + +++G+KF++ V I+
Sbjct: 200 YVALECAGFLAGIGLDVTVMV--RSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIE 257
Query: 275 NLEAGSDGR--VAAVKLEDGSTIDA--DTIVIGIGAKPTVSP--FERVG--LNSSVGGIQ 326
+EAG+ GR V A TI+ +T+++ +G E VG +N G I
Sbjct: 258 QIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIP 317
Query: 327 VDGQFRTRMPGIFAIGDVAAFPLKM 351
V + +T +P I+AIGD+ L++
Sbjct: 318 VTDEEQTNVPYIYAIGDILEGKLEL 342
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 217 YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIK 274
Y+ +E A G LD T++ +L R F +A + + +++G+KF++ V I+
Sbjct: 200 YVALECAGFLAGIGLDVTVMV--RSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIE 257
Query: 275 NLEAGSDGR--VAAVKLEDGSTIDA--DTIVIGIGAKPTVSP--FERVG--LNSSVGGIQ 326
+EAG+ GR V A TI+ +T+++ +G E VG +N G I
Sbjct: 258 QIEAGTPGRLKVTAKSTNSEETIEDEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIP 317
Query: 327 VDGQFRTRMPGIFAIGDVAAFPLKM 351
V + +T +P I+AIGD+ L++
Sbjct: 318 VTDEEQTNVPYIYAIGDILEGKLEL 342
>pdb|3NTD|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
pdb|3NTD|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C531s Mutant
Length = 565
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 109/248 (43%), Gaps = 35/248 (14%)
Query: 125 QTPEWYKEK-GIEMIYQDPVTSID-----IEKQTLITNSGKLLKYGSLIVATGCTASRFP 178
QTPE +K + +E+ + V +ID + + L+ S Y +L+++ G A P
Sbjct: 62 QTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA-APIVP 120
Query: 179 EKIGGYLPGVHYIRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G P H +R++ D D ++ +++ + +IG+E+ + + TT++
Sbjct: 121 PIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLL 180
Query: 237 FPENHLLQRLFTP---SLAQRYEQLYQQNGVKFVKVGASIKNLE-----------AGSDG 282
L ++ TP +A Q + GV ++G ++ + AG D
Sbjct: 181 ----ELADQVMTPVDREMAGFAHQAIRDQGVDL-RLGTALSEVSYQVQTHVASDAAGEDT 235
Query: 283 RVAAVK------LEDGSTIDADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRM 335
+K L +G ++ D +++ IG +P GL +GGI+V+ +T
Sbjct: 236 AHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSD 295
Query: 336 PGIFAIGD 343
P I+A+GD
Sbjct: 296 PAIYAVGD 303
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 217 YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIK 274
Y+ +E A G LD T++ +L R F +A + + +++G+KF++ V ++
Sbjct: 214 YVALECAGFLAGIGLDVTVMV--RSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVE 271
Query: 275 NLEAGSDGRVAAVKLEDGSTI----DADTIVIGIGAKPTVSP--FERVG--LNSSVGGIQ 326
+EAG+ GR+ V S + +T+++ IG E VG +N G I
Sbjct: 272 QIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIP 331
Query: 327 VDGQFRTRMPGIFAIGDV 344
V + +T +P I+AIGD+
Sbjct: 332 VTDEEQTNVPYIYAIGDI 349
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 217 YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIK 274
Y+ +E A G LD T++ +L R F +A + + +++G+KF++ V ++
Sbjct: 220 YVALECAGFLAGIGLDVTVMV--RSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVE 277
Query: 275 NLEAGSDGRVAAVKLEDGSTI----DADTIVIGIGAKPTVSP--FERVG--LNSSVGGIQ 326
+EAG+ GR+ V S + +T+++ IG E VG +N G I
Sbjct: 278 QIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIP 337
Query: 327 VDGQFRTRMPGIFAIGDV 344
V + +T +P I+AIGD+
Sbjct: 338 VTDEEQTNVPYIYAIGDI 355
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 217 YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIK 274
Y+ +E A G LD T++ +L R F +A + + +++G+KF++ V ++
Sbjct: 222 YVALECAGFLAGIGLDVTVMV--RSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVE 279
Query: 275 NLEAGSDGRVAAVKLEDGSTI----DADTIVIGIGAKPTVSP--FERVG--LNSSVGGIQ 326
+EAG+ GR+ V S + +T+++ IG E VG +N G I
Sbjct: 280 QIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIP 339
Query: 327 VDGQFRTRMPGIFAIGDV 344
V + +T +P I+AIGD+
Sbjct: 340 VTDEEQTNVPYIYAIGDI 357
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 217 YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIK 274
Y+ +E A G LD T++ +L R F +A + + +++G+KF++ V ++
Sbjct: 220 YVALECAGFLAGIGLDVTVMV--RSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVE 277
Query: 275 NLEAGSDGRVAAVKLEDGSTI----DADTIVIGIGAKPTVSP--FERVG--LNSSVGGIQ 326
+EAG+ GR+ V S + +T+++ IG E VG +N G I
Sbjct: 278 QIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIP 337
Query: 327 VDGQFRTRMPGIFAIGDV 344
V + +T +P I+AIGD+
Sbjct: 338 VTDEEQTNVPYIYAIGDI 355
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Query: 159 KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA-KKXXXXXXXY 217
+++ ++++ATG + FP G+ D + SL+K +K
Sbjct: 137 QVIDTKNILIATGSEVTPFP--------GITIDEDTIVSSTGALSLKKVPEKMVVIGAGV 188
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277
IG+E+ + D T + H+ +++ ++++ Q+ G KF K+ +
Sbjct: 189 IGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKF-KLNTKVTGAT 247
Query: 278 AGSDGRVAAVKLEDGS-----TIDADTIVIGIGAKPTVSPF--ERVGLN-SSVGGIQVDG 329
SDG++ V +E S I D +++ IG +P E +G+ G I V+
Sbjct: 248 KKSDGKID-VSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNT 306
Query: 330 QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT-YDYLP 387
+F+T++P I+AIGDV A P+ + A C++ + H Y+ +P
Sbjct: 307 RFQTKIPNIYAIGDVVAGPMLAH----------KAEDEGIICVEGMAGGAVHIDYNCVP 355
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Query: 159 KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA-KKXXXXXXXY 217
+++ ++++ATG + FP G+ D + SL+K +K
Sbjct: 137 QVIDTKNILIATGSEVTPFP--------GITIDEDTIVSSTGALSLKKVPEKMVVIGAGV 188
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277
IG+E+ + D T + H+ +++ ++++ Q+ G KF K+ +
Sbjct: 189 IGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKF-KLNTKVTGAT 247
Query: 278 AGSDGRVAAVKLEDGS-----TIDADTIVIGIGAKPTVSPF--ERVGLN-SSVGGIQVDG 329
SDG++ V +E S I D +++ IG +P E +G+ G I V+
Sbjct: 248 KKSDGKID-VSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNT 306
Query: 330 QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT-YDYLP 387
+F+T++P I+AIGDV A P+ + A C++ + H Y+ +P
Sbjct: 307 RFQTKIPNIYAIGDVVAGPMLAH----------KAEDEGIICVEGMAGGAVHIDYNCVP 355
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 217 YIGMEVAAA--AVGWKLDTTIIF--PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGAS 272
YIG+E A A G K+ I P L + FT L + E N + + G +
Sbjct: 159 YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEA----NNIT-IATGET 213
Query: 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR 332
++ E DGRV V + D + DAD +V+ +G +P + + G I+ D R
Sbjct: 214 VERYEG--DGRVQKV-VTDKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMR 270
Query: 333 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 375
T P +FA+GD D + +AR+ + +K L
Sbjct: 271 TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNL 313
>pdb|1NHS|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 217 YIGMEVAAA--AVGWKLDTTIIF--PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGAS 272
YIG+E A A G K+ I P L + FT L + E N + + G +
Sbjct: 159 YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEA----NNIT-IATGET 213
Query: 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR 332
++ E DGRV V + D + DAD +V+ +G +P + + G I+ D R
Sbjct: 214 VERYEG--DGRVQKV-VTDKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMR 270
Query: 333 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 375
T P +FA+GD D + +AR+ + +K L
Sbjct: 271 TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNL 313
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 30/239 (12%)
Query: 159 KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA-KKXXXXXXXY 217
+++ ++++ATG + FP G+ D + SL+K +K
Sbjct: 158 QVIDTKNILIATGSEVTPFP--------GITIDEDTIVSSTGALSLKKVPEKMVVIGAGV 209
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277
IG+E+ + D T + H+ +++ ++++ Q+ G KF K+ +
Sbjct: 210 IGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKF-KLNTKVTGAT 268
Query: 278 AGSDGRVAAVKLEDGS-----TIDADTIVIGIGAKPTVSPF--ERVGLN-SSVGGIQVDG 329
SDG++ V +E S I D +++ IG +P E +G+ G I V+
Sbjct: 269 KKSDGKID-VSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNT 327
Query: 330 QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT-YDYLP 387
+F+T++P I+AIGDV A P+ + A C++ + H Y+ +P
Sbjct: 328 RFQTKIPNIYAIGDVVAGPMLAH----------KAEDEGIICVEGMAGGAVHIDYNCVP 376
>pdb|1NHQ|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 217 YIGMEVAAA--AVGWKLDTTIIF--PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGAS 272
YIG+E A A G K+ I P L + FT L + E N + + G +
Sbjct: 159 YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEA----NNIT-IATGET 213
Query: 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR 332
++ E DGRV V + D + DAD +V+ +G +P + + G I+ D R
Sbjct: 214 VERYEG--DGRVQKV-VTDKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMR 270
Query: 333 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 375
T P +FA+GD D + +AR+ + +K L
Sbjct: 271 TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNL 313
>pdb|4GCM|A Chain A, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
pdb|4GCM|B Chain B, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
Length = 312
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 23/243 (9%)
Query: 110 RLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVA 169
PGF G + E K+ G Y D + D + +I K L ++I+A
Sbjct: 52 NFPGFEXITGPDLSTKXFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIA 111
Query: 170 TGCTASRFPEKIGGYLPGVHYI--RDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAV 227
TG +KIG +PG + R V+ + K K+ +E
Sbjct: 112 TGAEY----KKIG--VPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLT 165
Query: 228 GWKLDTTIIFPENHL-LQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286
+ TI+ + L QR+ ++ ++ + + F+ ++K++ DG+V +
Sbjct: 166 KFADKVTIVHRRDELRAQRILQ-------DRAFKNDKIDFI-WSHTLKSINE-KDGKVGS 216
Query: 287 VKL---EDGS--TIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAI 341
V L +DGS T +AD + I IG KP +PF+ +G+ + VG I T +PGIFA
Sbjct: 217 VTLTSTKDGSEETHEADGVFIYIGXKPLTAPFKDLGITNDVGYIVTKDDXTTSVPGIFAA 276
Query: 342 GDV 344
GDV
Sbjct: 277 GDV 279
>pdb|1NHP|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 217 YIGMEVAAA--AVGWKLDTTIIF--PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGAS 272
YIG+E A A G K+ I P L + FT L + E N + + G +
Sbjct: 159 YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEA----NNIT-IATGET 213
Query: 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR 332
++ E DGRV V + D + DAD +V+ +G +P + + G I+ D R
Sbjct: 214 VERYEG--DGRVQKV-VTDKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMR 270
Query: 333 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 375
T P +FA+GD D + +AR+ + +K L
Sbjct: 271 TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNL 313
>pdb|1JOA|A Chain A, Nadh Peroxidase With Cysteine-Sulfenic Acid
pdb|1NPX|A Chain A, Structure Of Nadh Peroxidase From Streptococcus Faecalis
10c1 Refined At 2.16 Angstroms Resolution
pdb|2NPX|A Chain A, Nadh Binding Site And Catalysis Of Nadh Peroxidase
Length = 447
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 217 YIGMEVAAA--AVGWKLDTTIIF--PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGAS 272
YIG+E A A G K+ I P L + FT L + E N + + G +
Sbjct: 159 YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEA----NNIT-IATGET 213
Query: 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR 332
++ E DGRV V + D + DAD +V+ +G +P + + G I+ D R
Sbjct: 214 VERYEG--DGRVQKV-VTDKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMR 270
Query: 333 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 375
T P +FA+GD D + +AR+ + +K L
Sbjct: 271 TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNL 313
>pdb|2V3A|A Chain A, Crystal Structure Of Rubredoxin Reductase From Pseudomonas
Aeruginosa.
pdb|2V3B|A Chain A, Crystal Structure Of The Electron Transfer Complex
Rubredoxin - Rubredoxin Reductase From Pseudomonas
Aeruginosa
Length = 384
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 29/302 (9%)
Query: 49 NENREFVIVGGGNAAGYAARTFVEHGMADGR--LCIVSKEAYAPYERPALTKGYLFPLDK 106
+E VI+G G A AR + + DG L +++ + Y +P L+ G+ D
Sbjct: 2 SERAPLVIIGTGLAGYNLAREWRK---LDGETPLLMITADDGRSYSKPMLSTGFSKNKDA 58
Query: 107 KPARLPGFHTCVGSGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGS 165
G P E+ ++ VT ID Q + ++ +Y
Sbjct: 59 -------------DGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGEEEV-RYRD 104
Query: 166 LIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVA-- 223
L++A G R P + G ++ I D+ D + ++ IG E A
Sbjct: 105 LVLAWGAEPIRVPVE-GDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFAND 163
Query: 224 AAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGR 283
++ G++LD ++ P ++ L P+ A+ + + GV+F +G + +L+ +G
Sbjct: 164 LSSGGYQLD--VVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRF-HLGPVLASLKKAGEGL 220
Query: 284 VAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGD 343
A L DG I D +V +G +P GL + G I VD RT I+A+GD
Sbjct: 221 EA--HLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANIYALGD 277
Query: 344 VA 345
A
Sbjct: 278 CA 279
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 240 NHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADT 299
N+L+ R F ++ + + NG++ + + + +DG V E G T+D D
Sbjct: 223 NNLILRGFDETIREEVTKQLTANGIE-IMTNENPAKVSLNTDGS-KHVTFESGKTLDVDV 280
Query: 300 IVIGIGAKPTVSPFE--RVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVA----AFPLKMY 352
+++ IG P + + VG+ + GG+QVD RT +P I+AIGD+ P+ +
Sbjct: 281 VMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAIN 340
Query: 353 DRTARVEHV--------DHAR 365
+ A V+ V DH R
Sbjct: 341 EGAALVDTVFGNKPRKTDHTR 361
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 240 NHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADT 299
N+L+ R F ++ + + NG++ + + + +DG V E G T+D D
Sbjct: 226 NNLILRGFDETIREEVTKQLTANGIE-IMTNENPAKVSLNTDGS-KHVTFESGKTLDVDV 283
Query: 300 IVIGIGAKPTVSPFE--RVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVA----AFPLKMY 352
+++ IG P + + VG+ + GG+QVD RT +P I+AIGD+ P+ +
Sbjct: 284 VMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAIN 343
Query: 353 DRTARVEHV--------DHAR 365
+ A V+ V DH R
Sbjct: 344 EGAALVDTVFGNKPRKTDHTR 364
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 156 NSGKLLKYGSLIVATGCTASRFPEKIGGY------LPGVHYI---RDVADADALISSLEK 206
N+ KLL G + TA R +GG+ LPG + D AL S+
Sbjct: 121 NTVKLLASGKTV-----TAERIVIAVGGHPSPHDALPGHELCITSNEAFDLPALPESILI 175
Query: 207 AKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 266
A YI +E A G + TT+I+ +L R F + ++ G++
Sbjct: 176 A------GGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQDXRRGLHAAXEEKGIRI 228
Query: 267 VKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF--ERVGLNSS-VG 323
+ I+++ A +DGR A + G + AD + + +G P + E G+ ++ +G
Sbjct: 229 L-CEDIIQSVSADADGRRVATTXKHGEIV-ADQVXLALGRXPNTNGLGLEAAGVRTNELG 286
Query: 324 GIQVDGQFRTRMPGIFAIGDV 344
I VD RT PGI+A+GDV
Sbjct: 287 AIIVDAFSRTSTPGIYALGDV 307
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 145 SIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204
+++++K+ N+ ++ ++VATG A FPE I G+ G D+D
Sbjct: 134 NVEVQKRD---NTTEVYSANHILVATGGKAI-FPENIPGFELG-------TDSDGFFRLE 182
Query: 205 EKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV 264
E+ KK YIG+E+A G +T ++ +L R F + Y + G+
Sbjct: 183 EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-RKFDECIQNTITDHYVKEGI 241
Query: 265 KFVKVGASIKNLEAGSDGRVAAVKLEDGSTI-DADTIVIGIGAKPTVSP-FERVGLN-SS 321
K+ +K +E + + + D +I D D ++ IG K + E VG+ +S
Sbjct: 242 NVHKLSKIVK-VEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNS 300
Query: 322 VGGIQVDGQFRTRMPGIFAIGDV 344
I D T +P I+++GDV
Sbjct: 301 HDQIIADEYQNTNVPNIYSLGDV 323
>pdb|3NTA|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
pdb|3NTA|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase
Length = 574
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 35/248 (14%)
Query: 125 QTPEWYKEK-GIEMIYQDPVTSID-----IEKQTLITNSGKLLKYGSLIVATGCTASRFP 178
QTPE +K + +E+ + V +ID + + L+ S Y +L+++ G A P
Sbjct: 62 QTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA-APIVP 120
Query: 179 EKIGGYLPGVHYIRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G P H +R++ D D ++ +++ + +IG+E + + TT++
Sbjct: 121 PIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEHATVVGGGFIGLEXXESLHHLGIKTTLL 180
Query: 237 FPENHLLQRLFTP---SLAQRYEQLYQQNGVKFVKVGASIKNLE-----------AGSDG 282
L ++ TP A Q + GV ++G ++ + AG D
Sbjct: 181 ----ELADQVXTPVDREXAGFAHQAIRDQGVDL-RLGTALSEVSYQVQTHVASDAAGEDT 235
Query: 283 RVAAVK------LEDGSTIDADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRM 335
+K L +G ++ D ++ IG +P GL +GGI+V+ +T
Sbjct: 236 AHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLARDAGLAIGELGGIKVNAXXQTSD 295
Query: 336 PGIFAIGD 343
P I+A+GD
Sbjct: 296 PAIYAVGD 303
>pdb|3NT6|A Chain A, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
pdb|3NT6|B Chain B, Structure Of The Shewanella Loihica Pv-4 Nadh-Dependent
Persulfide Reductase C43sC531S DOUBLE MUTANT
Length = 574
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 35/248 (14%)
Query: 125 QTPEWYKEK-GIEMIYQDPVTSID-----IEKQTLITNSGKLLKYGSLIVATGCTASRFP 178
QTPE +K + +E+ + V +ID + + L+ S Y +L+++ G A P
Sbjct: 62 QTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA-APIVP 120
Query: 179 EKIGGYLPGVHYIRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G P H +R++ D D ++ +++ + +IG+E + + TT++
Sbjct: 121 PIPGVDNPLTHSLRNIPDXDRILQTIQXNNVEHATVVGGGFIGLEXXESLHHLGIKTTLL 180
Query: 237 FPENHLLQRLFTP---SLAQRYEQLYQQNGVKFVKVGASIKNLE-----------AGSDG 282
L ++ TP A Q + GV ++G ++ + AG D
Sbjct: 181 ----ELADQVXTPVDREXAGFAHQAIRDQGVDL-RLGTALSEVSYQVQTHVASDAAGEDT 235
Query: 283 RVAAVK------LEDGSTIDADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRM 335
+K L +G ++ D ++ IG +P GL +GGI+V+ +T
Sbjct: 236 AHQHIKGHLSLTLSNGELLETDLLIXAIGVRPETQLARDAGLAIGELGGIKVNAXXQTSD 295
Query: 336 PGIFAIGD 343
P I+A+GD
Sbjct: 296 PAIYAVGD 303
>pdb|2BC0|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
pdb|2BC0|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: Wild-Type Nox
Length = 490
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 25/246 (10%)
Query: 128 EWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTASRFPEK---- 180
E + G ++ + PV SID + +T L+ + Y LI ATG P K
Sbjct: 100 EELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEI 159
Query: 181 ------IGGYLPGVHYIRDVADADALISSLEKA--KKXXXXXXXYIGMEVAAAAVGWKLD 232
L + +++ ++ +I+ LE K+ YIG+E+A A +
Sbjct: 160 KEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKE 219
Query: 233 TTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDG 292
+I + L + L + +++G++ G ++K E +G+V + + D
Sbjct: 220 VVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLA-FGETVK--EVAGNGKVEKI-ITDK 275
Query: 293 STIDADTIVIGIGAKPTVSPFE-RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKM 351
+ D D +++ +G +P + ++ L + G V+ + T +PG++AIGD A +
Sbjct: 276 NEYDVDMVILAVGFRPNTTLGNGKIDLFRN-GAFLVNKRQETSIPGVYAIGDCAT----I 330
Query: 352 YDRTAR 357
YD R
Sbjct: 331 YDNATR 336
>pdb|2BC1|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BC1|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox
pdb|2BCP|A Chain A, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
pdb|2BCP|B Chain B, Structural Analysis Of Streptococcus Pyogenes Nadh
Oxidase: C44s Nox With Azide
Length = 490
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 25/246 (10%)
Query: 128 EWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTASRFPEK---- 180
E + G ++ + PV SID + +T L+ + Y LI ATG P K
Sbjct: 100 EELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEI 159
Query: 181 ------IGGYLPGVHYIRDVADADALISSLEKA--KKXXXXXXXYIGMEVAAAAVGWKLD 232
L + +++ ++ +I+ LE K+ YIG+E+A A +
Sbjct: 160 KEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKE 219
Query: 233 TTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDG 292
+I + L + L + +++G++ G ++K E +G+V + + D
Sbjct: 220 VVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLA-FGETVK--EVAGNGKVEKI-ITDK 275
Query: 293 STIDADTIVIGIGAKPTVSPFE-RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKM 351
+ D D +++ +G +P + ++ L + G V+ + T +PG++AIGD A +
Sbjct: 276 NEYDVDMVILAVGFRPNTTLGNGKIDLFRN-GAFLVNKRQETSIPGVYAIGDCAT----I 330
Query: 352 YDRTAR 357
YD R
Sbjct: 331 YDNATR 336
>pdb|3KLJ|A Chain A, Crystal Structure Of Nadh:rubredoxin Oxidoreductase From
Clostridium Acetobutylicum
Length = 385
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 125/302 (41%), Gaps = 50/302 (16%)
Query: 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLP 112
+ +I+G G A AA+ + G D + +++ E Y PY RP L + + K +
Sbjct: 11 KILILGAGPAGFSAAKAAL--GKCDD-ITMINSEKYLPYYRPRLNE-----IIAKNKSID 62
Query: 113 GFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGC 172
+ +WY++ I++I + TSID + + SG+ +KY LI+A+G
Sbjct: 63 DILI--------KKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGS 114
Query: 173 TASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK---KXXXXXXXYIGMEVAAAAV-- 227
A++ +P I + D + ++ K K +G+E+A A +
Sbjct: 115 IANKIK------VPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDS 168
Query: 228 GWKLDTTII--FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVA 285
G II +P L R L + ++L G+K + N E
Sbjct: 169 GTPASIGIILEYPLERQLDRDGGLFLKDKLDRL----GIKIY----TNSNFE-------- 212
Query: 286 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVA 345
E G I + ++ +G KP + + + +S GI V+ T + I+A GDVA
Sbjct: 213 ----EMGDLIRSSCVITAVGVKPNLDFIKDTEI-ASKRGILVNDHMETSIKDIYACGDVA 267
Query: 346 AF 347
F
Sbjct: 268 EF 269
>pdb|1F8W|A Chain A, Crystal Structure Of Nadh Peroxidase Mutant: R303m
Length = 447
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 12/163 (7%)
Query: 217 YIGMEVAAA--AVGWKLDTTIIF--PENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGAS 272
YIG+E A A G K+ I P L + FT L + E N + + G +
Sbjct: 159 YIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEA----NNIT-IATGET 213
Query: 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR 332
++ E DGRV V + D + DAD +V+ +G +P + + G I+ D R
Sbjct: 214 VERYEG--DGRVQKV-VTDKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMR 270
Query: 333 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 375
T P +FA+GD D + +A + + +K L
Sbjct: 271 TSEPDVFAVGDATLIKYNPADTEVNIALATNAMKQGRFAVKNL 313
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 107/242 (44%), Gaps = 28/242 (11%)
Query: 154 ITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYI-RDVADADALISSLEKAKKXXX 212
I ++K +I+ATG LPGV + + + ++ E KK
Sbjct: 131 IEGENTVVKGKHIIIATGSDVKS--------LPGVTIDEKKIVSSTGALALSEIPKKLVV 182
Query: 213 XXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGAS 272
YIG+E+ + + T++ + ++ + + +++++ ++ G+KF K+
Sbjct: 183 IGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTM-DAEIRKQFQRSLEKQGMKF-KLKTK 240
Query: 273 IKNLEAGSDGRVAAVKLEDG---STIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQ 326
+ ++ DG V+ G + I+AD +++ G P S +++G+ + +G I
Sbjct: 241 VVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRIL 300
Query: 327 VDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT-YDY 385
V+ +F T + G++AIGDV P+ + A + C++ L H YD
Sbjct: 301 VNERFSTNVSGVYAIGDVIPGPMLAH----------KAEEDGVACVEYLAGKVGHVDYDK 350
Query: 386 LP 387
+P
Sbjct: 351 VP 352
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 148 IEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA 207
++ +TL N G+ + +++ATG S P+ +PGV Y D+D +
Sbjct: 118 VDAKTLEVN-GETITADHILIATGGRPSH-PD-----IPGVEY---GIDSDGFFALPALP 167
Query: 208 KKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFV 267
++ YI +E+A G T + F H R F P +++ ++ G +
Sbjct: 168 ERVAVVGAGYIAVELAGVINGLGAKTHL-FVRKHAPLRSFDPMISETLVEVMNAEGPQL- 225
Query: 268 KVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSSVGG- 324
A K + +DG + ++LEDG + D ++ IG +P E G+ ++ G
Sbjct: 226 HTNAIPKAVVKNTDGSLT-LELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGY 284
Query: 325 IQVDGQFRTRMPGIFAIGD 343
I VD T + GI+A+GD
Sbjct: 285 IVVDKYQNTNIEGIYAVGD 303
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 241 HLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTI 300
++ R F +L + + NG++ + K +E +DG +V E G +D D +
Sbjct: 224 EMILRGFDHTLREELTKQLTANGIQILTKENPAK-VELNADGS-KSVTFESGKKMDFDLV 281
Query: 301 VIGIGAKPTVSPFE--RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAA----FPLKMYDR 354
++ IG P + G+ GG+QVD RT + I+AIGDV P+ + +
Sbjct: 282 MMAIGRSPRTKDLQLQNAGVMIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEA 341
Query: 355 TARVEHV--------DHAR 365
A V+ V DH R
Sbjct: 342 AALVDTVFGTNPRKTDHTR 360
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 242 LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301
++ R F +L + + NG++ + K +E +DG +V E G +D D ++
Sbjct: 224 MILRGFDHTLREELTKQLTANGIQILTKENPAK-VELNADGS-KSVTFESGKKMDFDLVM 281
Query: 302 IGIGAKPTVSPFE--RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVA----AFPLKMYDRT 355
+ IG P + G+ GG+QVD RT + I+AIGDV P+ + +
Sbjct: 282 MAIGRSPRTKDLQLQNAGVMIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAA 341
Query: 356 ARVEHV--------DHAR 365
A V+ V DH R
Sbjct: 342 ALVDTVFGTTPRKTDHTR 359
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 242 LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301
++ R F +L + + NG++ + K +E +DG +V E G +D D ++
Sbjct: 225 MILRGFDHTLREELTKQLTANGIQILTKENPAK-VELNADGS-KSVTFESGKKMDFDLVM 282
Query: 302 IGIGAKPTVSPFE--RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVA----AFPLKMYDRT 355
+ IG P + G+ GG+QVD RT + I+AIGDV P+ + +
Sbjct: 283 MAIGRSPRTKDLQLQNAGVMIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAA 342
Query: 356 ARVEHV--------DHAR 365
A V+ V DH R
Sbjct: 343 ALVDTVFGTTPRKTDHTR 360
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 242 LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301
++ R F +L + + NG++ + K +E +DG +V E G +D D ++
Sbjct: 226 MILRGFDHTLREELTKQLTANGIQILTKENPAK-VELNADGS-KSVTFESGKKMDFDLVM 283
Query: 302 IGIGAKPTVSPFE--RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVA----AFPLKMYDRT 355
+ IG P + G+ GG+QVD RT + I+AIGDV P+ + +
Sbjct: 284 MAIGRSPRTKDLQLQNAGVMIKNGGVQVDEYSRTNVSNIYAIGDVTNRVMLTPVAINEAA 343
Query: 356 ARVEHV--------DHAR 365
A V+ V DH R
Sbjct: 344 ALVDTVFGTTPRKTDHTR 361
>pdb|4EQW|A Chain A, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
pdb|4EQW|B Chain B, Crystal Structure Of The Y361f, Y419f Mutant Of
Staphylococcus Aureus Coadr
Length = 437
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 126 TPE-WYKEKGIEMIYQDPVTSIDIEKQTLI-----TNSGKLLKYGSLIVATGCTASRFPE 179
TPE +Y K I + V +I+ E+QT+ TN Y LI++ G +A+
Sbjct: 62 TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-- 119
Query: 180 KIGGYLPGVHY-IRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G+ + + +R++ D DA+ ++ + K Y+ +EV L T+I
Sbjct: 120 ---GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLI 176
Query: 237 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTID 296
+ + +L + Q + + + ++ I + + + G
Sbjct: 177 HRSDKI-NKLMDADMNQPILDELDKREIPY-RLNEEINAINGNE------ITFKSGKVEH 228
Query: 297 ADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 355
D I+ G+G P E + G I V+ +F T +P I+AIGD+A + D
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLP 288
Query: 356 ARV 358
A V
Sbjct: 289 ASV 291
>pdb|4EQS|A Chain A, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQS|B Chain B, Crystal Structure Of The Y419f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 126 TPE-WYKEKGIEMIYQDPVTSIDIEKQTLI-----TNSGKLLKYGSLIVATGCTASRFPE 179
TPE +Y K I + V +I+ E+QT+ TN Y LI++ G +A+
Sbjct: 62 TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-- 119
Query: 180 KIGGYLPGVHY-IRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G+ + + +R++ D DA+ ++ + K Y+ +EV L T+I
Sbjct: 120 ---GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLI 176
Query: 237 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTID 296
+ + +L + Q + + + ++ I + + + G
Sbjct: 177 HRSDKI-NKLMDADMNQPILDELDKREIPY-RLNEEINAINGNE------ITFKSGKVEH 228
Query: 297 ADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 355
D I+ G+G P E + G I V+ +F T +P I+AIGD+A + D
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLP 288
Query: 356 ARV 358
A V
Sbjct: 289 ASV 291
>pdb|4EQR|A Chain A, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQR|B Chain B, Crystal Structure Of The Y361f Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 126 TPE-WYKEKGIEMIYQDPVTSIDIEKQTLI-----TNSGKLLKYGSLIVATGCTASRFPE 179
TPE +Y K I + V +I+ E+QT+ TN Y LI++ G +A+
Sbjct: 62 TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-- 119
Query: 180 KIGGYLPGVHY-IRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G+ + + +R++ D DA+ ++ + K Y+ +EV L T+I
Sbjct: 120 ---GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLI 176
Query: 237 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTID 296
+ + +L + Q + + + ++ I + + + G
Sbjct: 177 HRSDKI-NKLMDADMNQPILDELDKREIPY-RLNEEINAINGNE------ITFKSGKVEH 228
Query: 297 ADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 355
D I+ G+G P E + G I V+ +F T +P I+AIGD+A + D
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLP 288
Query: 356 ARV 358
A V
Sbjct: 289 ASV 291
>pdb|4EMW|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
pdb|4EMW|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Etvc-Coa
Length = 436
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 126 TPE-WYKEKGIEMIYQDPVTSIDIEKQTLI-----TNSGKLLKYGSLIVATGCTASRFPE 179
TPE +Y K I + V +I+ E+QT+ TN Y LI++ G +A+
Sbjct: 62 TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-- 119
Query: 180 KIGGYLPGVHY-IRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G+ + + +R++ D DA+ ++ + K Y+ +EV L T+I
Sbjct: 120 ---GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLI 176
Query: 237 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTID 296
+ + +L + Q + + + ++ I + + + G
Sbjct: 177 HRSDKI-NKLMDADMNQPILDELDKREIPY-RLNEEINAINGNE------ITFKSGKVEH 228
Query: 297 ADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 355
D I+ G+G P E + G I V+ +F T +P I+AIGD+A + D
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLP 288
Query: 356 ARV 358
A V
Sbjct: 289 ASV 291
>pdb|1YQZ|A Chain A, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
pdb|1YQZ|B Chain B, Structure Of Coenzyme A-Disulfide Reductase From
Staphylococcus Aureus Refined At 1.54 Angstrom
Resolution
Length = 438
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 126 TPE-WYKEKGIEMIYQDPVTSIDIEKQTLI-----TNSGKLLKYGSLIVATGCTASRFPE 179
TPE +Y K I + V +I+ E+QT+ TN Y LI++ G +A+
Sbjct: 63 TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-- 120
Query: 180 KIGGYLPGVHY-IRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G+ + + +R++ D DA+ ++ + K Y+ +EV L T+I
Sbjct: 121 ---GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLI 177
Query: 237 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTID 296
+ + +L + Q + + + ++ I + + + G
Sbjct: 178 HRSDKI-NKLMDADMNQPILDELDKREIPY-RLNEEINAINGNE------ITFKSGKVEH 229
Query: 297 ADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 355
D I+ G+G P E + G I V+ +F T +P I+AIGD+A + D
Sbjct: 230 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLP 289
Query: 356 ARV 358
A V
Sbjct: 290 ASV 292
>pdb|4EM3|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM3|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Mevs-Coa
pdb|4EM4|A Chain A, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
pdb|4EM4|B Chain B, Crystal Structure Of Staphylococcus Aureus Bound With The
Covalent Inhibitor Pethyl-Vs-Coa
Length = 437
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 126 TPE-WYKEKGIEMIYQDPVTSIDIEKQTLI-----TNSGKLLKYGSLIVATGCTASRFPE 179
TPE +Y K I + V +I+ E+QT+ TN Y LI++ G +A+
Sbjct: 62 TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-- 119
Query: 180 KIGGYLPGVHY-IRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G+ + + +R++ D DA+ ++ + K Y+ +EV L T+I
Sbjct: 120 ---GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLI 176
Query: 237 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTID 296
+ + +L + Q + + + ++ I + + + G
Sbjct: 177 HRSDKI-NKLMDADMNQPILDELDKREIPY-RLNEEINAINGNE------ITFKSGKVEH 228
Query: 297 ADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 355
D I+ G+G P E + G I V+ +F T +P I+AIGD+A + D
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLP 288
Query: 356 ARV 358
A V
Sbjct: 289 ASV 291
>pdb|4EQX|A Chain A, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
pdb|4EQX|B Chain B, Crystal Structure Of The C43s Mutant Of Staphylococcus
Aureus Coadr
Length = 437
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 126 TPE-WYKEKGIEMIYQDPVTSIDIEKQTLI-----TNSGKLLKYGSLIVATGCTASRFPE 179
TPE +Y K I + V +I+ E+QT+ TN Y LI++ G +A+
Sbjct: 62 TPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSL-- 119
Query: 180 KIGGYLPGVHY-IRDVADADALISSLE--KAKKXXXXXXXYIGMEVAAAAVGWKLDTTII 236
G+ + + +R++ D DA+ ++ + K Y+ +EV L T+I
Sbjct: 120 ---GFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLI 176
Query: 237 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTID 296
+ + +L + Q + + + ++ I + + + G
Sbjct: 177 HRSDKI-NKLMDADMNQPILDELDKREIPY-RLNEEINAINGNE------ITFKSGKVEH 228
Query: 297 ADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 355
D I+ G+G P E + G I V+ +F T +P I+AIGD+A + D
Sbjct: 229 YDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLP 288
Query: 356 ARV 358
A V
Sbjct: 289 ASV 291
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
Query: 166 LIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA-KKXXXXXXXYIGMEVAA 224
+I+A+G ++ LPGV Y D +S K + YIG+E+A+
Sbjct: 136 MIIASGAETAKLR------LPGVEYCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIAS 189
Query: 225 AAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRV 284
+ T II + L L + + + N +KF +K ++ +
Sbjct: 190 IFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILKLN-IKFNSPVTEVKKIKDDEYEVI 248
Query: 285 AAVKLEDGSTIDADTIVIGIGAKPTVSPFER-VGLNSSVGGIQVDGQFRTRMPGIFAIGD 343
+ K +I +++V+ G +P + R +GL+ S GI VD +T +P +FA GD
Sbjct: 249 YSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTGIVVDETMKTNIPNVFATGD 308
>pdb|3AB1|A Chain A, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
pdb|3AB1|B Chain B, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 260 QQNGVKFVKVGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPTVSPFER 315
+ NG V + + ++E S+G + V L DGS T++AD ++I IG K + P R
Sbjct: 212 RANGTIDVYLETEVASIEE-SNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLAR 270
Query: 316 VGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKM 351
L + VD +T + G++A GD+A +P K+
Sbjct: 271 WDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGKL 306
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 26/198 (13%)
Query: 160 LLKYGSLIVATGCTASRFPEKIGGYLP-GVHYIRDVADADALISSLEKAKKXXXXXXXYI 218
LL +++ATG R+P ++ G L G+ +D + E K Y+
Sbjct: 145 LLSAEHIVIATG-GRPRYPTQVKGALEYGI-------TSDDIFWLKESPGKTLVVGASYV 196
Query: 219 GMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIKNL 276
+E A G LDTT++ L R F ++ + + +G +F+K V + IK L
Sbjct: 197 ALECAGFLTGIGLDTTVMMRSIPL--RGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKL 254
Query: 277 EAGSDGRVAAVKLEDGS-----TIDADTIVIGIGAKPTVSPF--ERVGL--NSSVGGIQV 327
V ED + T DT++ IG P E+ G+ N I V
Sbjct: 255 PTNQ----LQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIV 310
Query: 328 DGQFRTRMPGIFAIGDVA 345
D Q T +P I+AIGDVA
Sbjct: 311 DAQEATSVPHIYAIGDVA 328
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 26/198 (13%)
Query: 160 LLKYGSLIVATGCTASRFPEKIGGYLP-GVHYIRDVADADALISSLEKAKKXXXXXXXYI 218
LL +++ATG R+P ++ G L G+ +D + E K Y+
Sbjct: 171 LLSAEHIVIATG-GRPRYPTQVKGALEYGI-------TSDDIFWLKESPGKTLVVGASYV 222
Query: 219 GMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIKNL 276
+E A G LDTT++ L R F ++ + + +G +F+K V + IK L
Sbjct: 223 ALECAGFLTGIGLDTTVMMRSIPL--RGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKL 280
Query: 277 EAGSDGRVAAVKLEDGS-----TIDADTIVIGIGAKPTVSPF--ERVGL--NSSVGGIQV 327
V ED + T DT++ IG P E+ G+ N I V
Sbjct: 281 PTNQ----LQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIV 336
Query: 328 DGQFRTRMPGIFAIGDVA 345
D Q T +P I+AIGDVA
Sbjct: 337 DAQEATSVPHIYAIGDVA 354
>pdb|3ICR|A Chain A, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICR|B Chain B, Crystal Structure Of Oxidized Bacillus Anthracis Coadr-Rhd
pdb|3ICS|A Chain A, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICS|B Chain B, Crystal Structure Of Partially Reduced Bacillus Anthracis
Coadr-Rhd
pdb|3ICT|A Chain A, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
pdb|3ICT|B Chain B, Crystal Structure Of Reduced Bacillus Anthracis Coadr-Rhd
Length = 588
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 285 AAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSV-GGIQVDGQFRTRMPGIFAIGD 343
A V+L+ GS I D +++ IG +P S + GL V G I+V+ +F+T P I+AIGD
Sbjct: 259 AVVRLKSGSVIQTDXLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGD 318
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 251 LAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA---VKLEDGSTIDADTIVIGIGAK 307
+A++ ++ + G+ F K+GA + DG VK + +T+DA+ ++I G K
Sbjct: 241 VAKQLQRXLTKQGIDF-KLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRK 299
Query: 308 PTVSPF--ERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFP 348
P+ + G+ S G +++D F+T + G++AIGDV P
Sbjct: 300 PSTDGLGLAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGP 343
>pdb|3OC4|A Chain A, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
pdb|3OC4|B Chain B, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
Length = 452
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 10/222 (4%)
Query: 126 TPEWYKEKGIEMIYQDPVTSIDIEKQTLI---TNSGKLLKYGSLIVATGCTASRFPEKI- 181
T E + + I+++ V + D+E Q + + Y LI+ATG AS+F +I
Sbjct: 64 TEEELRRQKIQLLLNREVVAXDVENQLIAWTRKEEQQWYSYDKLILATG--ASQFSTQIR 121
Query: 182 GGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENH 241
G + + ++ A A + LE ++ IG E V K + +
Sbjct: 122 GSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGXEAIDFLVKXKKTVHVFESLEN 181
Query: 242 LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301
LL + F ++ ++ V F ++ +E ++G V ++ I D+ +
Sbjct: 182 LLPKYFDKEXVAEVQKSLEKQAVIF-HFEETVLGIEETANGIVLETSEQE---ISCDSGI 237
Query: 302 IGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGD 343
+ P ++ ++ + I VD +T +P +FAIGD
Sbjct: 238 FALNLHPQLAYLDKKIQRNLDQTIAVDAYLQTSVPNVFAIGD 279
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 217 YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNL 276
YIG+E+ A +++ +L + L + ++ G+ +G S++
Sbjct: 181 YIGLELGIAYRKLGAQVSVVEARERILPT-YDSELTAPVAESLKKLGIAL-HLGHSVEGY 238
Query: 277 EAG----SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGG--IQVDGQ 330
E G +DG+ ++LE AD +++ +G +P F L+ + G I +D +
Sbjct: 239 ENGCLLANDGKGGQLRLE------ADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDER 292
Query: 331 FRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 361
+T M ++AIGDVA P+ + A+ E V
Sbjct: 293 CQTSMHNVWAIGDVAGEPMLAHRAMAQGEMV 323
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 28/205 (13%)
Query: 148 IEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA 207
++ +TL N G+ + +++ATG S P+ +PGV Y D+D +
Sbjct: 118 VDAKTLEVN-GETITADHILIATGGRPSH-PD-----IPGVEY---GIDSDGFFALPALP 167
Query: 208 KKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------FTPSLAQRYEQLYQQ 261
++ YIG+E+ G T HL + F P +++ ++
Sbjct: 168 ERVAVVGAGYIGVELGGVINGLGAKT-------HLFEMFDAPLPSFDPMISETLVEVMNA 220
Query: 262 NGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLN 319
G + A K + +DG + ++LEDG + D ++ IG +P E G+
Sbjct: 221 EGPQL-HTNAIPKAVVKNTDGSLT-LELEDGRSETVDCLIWAIGREPANDNINLEAAGVK 278
Query: 320 SSVGG-IQVDGQFRTRMPGIFAIGD 343
++ G I VD T + GI+A+GD
Sbjct: 279 TNEKGYIVVDKYQNTNIEGIYAVGD 303
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 251 LAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGST-----IDADTIVIGIG 305
+A+ ++ ++ G+ F K+ + + + D V + +ED T ++A+ +++ +G
Sbjct: 226 VAKATQKFLKKQGLDF-KLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVG 284
Query: 306 AKPTVSPF--ERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPL 349
+P ++ E++GL G + +D QF ++ P I +GDV P+
Sbjct: 285 RRPYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPM 331
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 185 LPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQ 244
P V I + +D + ++++KK YI +E+ +D+ I N +L+
Sbjct: 155 FPPVKGIENTISSDEFFN-IKESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213
Query: 245 RLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDA-DTIVIG 303
+ F S+ E ++N + V A + ++ SD ++ + L DG + D ++
Sbjct: 214 K-FDESVINVLENDMKKNNINIVTF-ADVVEIKKVSDKNLS-IHLSDGRIYEHFDHVIYC 270
Query: 304 IGAKPTVS--PFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 361
+G P E++ + ++ I VD RT + I+A+GD M ++ +E +
Sbjct: 271 VGRSPDTENLKLEKLNVETNNNYIVVDENQRTSVNNIYAVGDCC-----MVKKSKEIEDL 325
Query: 362 D 362
+
Sbjct: 326 N 326
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 197 ADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256
+D + ++ K+ YIG+E+A + + T++ E+ LL + F P L+
Sbjct: 156 SDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLLSATLA 214
Query: 257 QLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDA-DTIVIGIGAKPTVSPF-- 313
+ G++ + ++ LE D + + +DG+ ++ D+++ +G P
Sbjct: 215 ENMHAQGIE-THLEFAVAALE--RDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGL 271
Query: 314 ERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDV 344
E G+ S G + D T +PG++A+GD+
Sbjct: 272 EAAGIEVQSNGMVPTDAYQNTNVPGVYALGDI 303
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 166 LIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA-KKXXXXXXXYIGMEVAA 224
+++ATG +P ++G +PG + + +A LE A K+ YI +E A
Sbjct: 176 ILIATG----SWPTRLG--VPGDEFC--ITSNEAFY--LEDAPKRMLCVGGGYIAVEFAG 225
Query: 225 AAVGWK-----LDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAG 279
G+K +D + L+ R F + + + NG++ V+ + +
Sbjct: 226 IFNGYKPCGGYVD---LCYRGDLILRGFDTEVRKSLTKQLGANGIR-VRTNLNPTKITKN 281
Query: 280 SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE------RVGLNSSVGGIQVDGQFRT 333
DG V DG+ D D +++ IG P + R G N G +QVD +T
Sbjct: 282 EDGS-NHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRTGKN---GAVQVDAYSKT 337
Query: 334 RMPGIFAIGDVAA----FPLKMYDRTARVEHV 361
+ I+AIGDV P+ + + A VE V
Sbjct: 338 SVDNIYAIGDVTNRVMLTPVAINEGAAFVETV 369
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 147 DIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 206
D+ K+ +T KY +++ATGC P+ + G ++++ I SL+K
Sbjct: 177 DLSKEETVTG-----KY--ILIATGCRP-HIPDDVEG-------AKELSITSDDIFSLKK 221
Query: 207 A-KKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265
K Y+ +E + D T+ ++ R F A + + ++ GV
Sbjct: 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS--IVLRGFDQQCAVKVKLYMEEQGVM 279
Query: 266 FVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE----RVGLNSS 321
F K G K L D + V+ D ++ DT++ IG K + + +N S
Sbjct: 280 F-KNGILPKKLTKMDDKIL--VEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKS 336
Query: 322 VGGIQVDGQFRTRMPGIFAIGDVA 345
I D T +P IFA+GDVA
Sbjct: 337 NNKIIADHLSCTNIPSIFAVGDVA 360
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 166 LIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA-KKXXXXXXXYIGMEVAA 224
+++ATG +P ++G +PG + + +A LE A K+ YI +E A
Sbjct: 176 ILIATG----SWPTRLG--VPGDEFC--ITSNEAFY--LEDAPKRMLCVGGGYIAVEFAG 225
Query: 225 AAVGWK-----LDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAG 279
G+K +D + L+ R F + + + NG++ V+ + +
Sbjct: 226 IFNGYKPCGGYVD---LCYRGDLILRGFDTEVRKSLTKQLGANGIR-VRTNLNPTKITKN 281
Query: 280 SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE------RVGLNSSVGGIQVDGQFRT 333
DG V DG+ D D +++ IG P + R G N G +QVD +T
Sbjct: 282 EDGS-NHVHFNDGTEEDYDQVMLAIGRVPRSQALQLDKAGVRTGKN---GAVQVDAYSKT 337
Query: 334 RMPGIFAIGDVAA----FPLKMYDRTARVEHV 361
+ I+AIGDV P+ + + A VE V
Sbjct: 338 SVDNIYAIGDVTNRVMLTPVAINEGAAFVETV 369
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 13/225 (5%)
Query: 127 PEWY-KEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGY 184
PE + K++GI++ V +D + N G K ++ L+ A G + + P G
Sbjct: 65 PEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGAS-PQVPAIEGVN 123
Query: 185 LPGVHYIRDVADADALISSLEKAK--KXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHL 242
L GV DA A+ +EK K YIG+E+A A + T+I +
Sbjct: 124 LKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183
Query: 243 LQRLFTPSLAQRYEQ-LYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301
L+R F + E+ L + ++ ++ I+ E RV V + D A+ ++
Sbjct: 184 LRRSFDKEVTDILEEKLKKHVNLRLQEITMKIEGEE-----RVEKV-VTDAGEYKAELVI 237
Query: 302 IGIGAKPTVSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVA 345
+ G KP + +++G+ G I + + +T + ++A GDVA
Sbjct: 238 LATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVA 282
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 242 LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301
++ R F L ++ + + NG+ V+ + + +DG V E G+ D D ++
Sbjct: 224 MILRGFDSELRKQLTEQLRANGIN-VRTHENPAKVTKNADGTRHVV-FESGAEADYDVVM 281
Query: 302 IGIGAKPTVSPF--ERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDV 344
+ IG P E+ G+ + G I+VD +T + I+AIGDV
Sbjct: 282 LAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDV 327
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 242 LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301
++ R F L ++ + + NG+ V+ + + +DG V E G+ D D ++
Sbjct: 224 MILRGFDSELRKQLTEQLRANGIN-VRTHENPAKVTKNADGTRHVV-FESGAEADYDVVM 281
Query: 302 IGIGAKPTVSPF--ERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDV 344
+ IG P E+ G+ + G I+VD +T + I+AIGDV
Sbjct: 282 LAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDV 327
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 234 TIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA---VKLE 290
T++ ++H+L A E+ + + GV+ KN A S R A V +
Sbjct: 209 TVVASQDHVLP-YEDADAALVLEESFAERGVRL------FKNARAASVTRTGAGVLVTMT 261
Query: 291 DGSTIDADTIVIGIGAKPTVS--PFERVGLNSSVGG-IQVDGQFRTRMPGIFAIGDVAAF 347
DG T++ ++ IG+ P S ERVG+ G + VD RT GI+A GD
Sbjct: 262 DGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGL 321
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 242 LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301
++ R F L ++ + + NG+ V+ + + +DG V E G+ D D ++
Sbjct: 225 MILRGFDSELRKQLTEQLRANGIN-VRTHENPAKVTKNADGTRHVV-FESGAEADYDVVM 282
Query: 302 IGIGAKPTVSPF--ERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDV 344
+ IG P ++ G+ + G I+VD +T + I+AIGDV
Sbjct: 283 LAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDV 328
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 242 LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301
++ R F L ++ + + NG+ V+ + + +DG V E G+ D D ++
Sbjct: 225 MILRGFDSELRKQLTEQLRANGIN-VRTHENPAKVTKNADGTRHVV-FESGAEADYDVVM 282
Query: 302 IGIGAKPTVSPF--ERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDV 344
+ IG P ++ G+ + G I+VD +T + I+AIGDV
Sbjct: 283 LAIGRVPRSQTLQLDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDV 328
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 197 ADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256
+D L S + K YIG+E A G + T++ ++ R F +A+
Sbjct: 173 SDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMV--RSIVLRGFDQQMAELVA 230
Query: 257 QLYQQNGVKFVKVGASIKNLEAGSDGRVAA----VKLEDGSTIDADTIVIGIGAKPTVSP 312
++ G+ F++ + ++E DG++ V+ + S DT++ IG K V
Sbjct: 231 ASMEERGIPFLRKTVPL-SVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDD 289
Query: 313 FE--RVGLNSSVGGIQVDGQFRTRMPGIFAIGDV 344
G+ I VD Q T + I+A+GD+
Sbjct: 290 LNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDI 323
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 197 ADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256
+D L S + K YIG+E A G + T++ ++ R F +A+
Sbjct: 177 SDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMV--RSIVLRGFDQQMAELVA 234
Query: 257 QLYQQNGVKFVKVGASIKNLEAGSDGRVAA----VKLEDGSTIDADTIVIGIGAKPTVSP 312
++ G+ F++ + ++E DG++ V+ + S DT++ IG K V
Sbjct: 235 ASMEERGIPFLRKTVPL-SVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDD 293
Query: 313 FE--RVGLNSSVGGIQVDGQFRTRMPGIFAIGDV 344
G+ I VD Q T + I+A+GD+
Sbjct: 294 LNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDI 327
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 197 ADALISSLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256
+D L S + K YIG+E A G + T++ ++ R F +A+
Sbjct: 177 SDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMV--RSIVLRGFDQQMAELVA 234
Query: 257 QLYQQNGVKFVKVGASIKNLEAGSDGRVAA----VKLEDGSTIDADTIVIGIGAKPTVSP 312
++ G+ F++ + ++E DG++ V+ + S DT++ IG K V
Sbjct: 235 ASMEERGIPFLRKTVPL-SVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDD 293
Query: 313 FE--RVGLNSSVGGIQVDGQFRTRMPGIFAIGDV 344
G+ I VD Q T + I+A+GD+
Sbjct: 294 LNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDI 327
>pdb|3CTY|A Chain A, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
pdb|3CTY|B Chain B, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
Length = 319
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 279 GSDGRVAAVKLEDGST-----IDADTIVIGIGAKPTVSPFERVGLN-SSVGGIQVDGQFR 332
G +V VK +D +T I+ D + I +G P S + G+ G I VD + R
Sbjct: 218 GDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQR 277
Query: 333 TRMPGIFAIGDVAA 346
T +PG++A GDV +
Sbjct: 278 TSVPGVYAAGDVTS 291
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 32/233 (13%)
Query: 166 LIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAA 225
+I+ATG ++PE G G+ +D L S K Y+ +E A
Sbjct: 253 IILATG-ERPKYPEIPGAVEYGI-------TSDDLFSLPYFPGKTLVIGASYVALECAGF 304
Query: 226 AVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIKNLE-AGSDG 282
D T++ +L R F +A++ + +GVKF K V IK L+ ++
Sbjct: 305 LASLGGDVTVMV--RSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTEN 362
Query: 283 RVAAVKLEDGSTIDA-------DTIVIGIGAKPTVSPF--ERVGLNSSVGG-IQVDGQFR 332
+ L G D +T++ +G +P +S E VG+ G + +
Sbjct: 363 NKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQ 422
Query: 333 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDY 385
T + ++AIGD+ A + + A Q+ ++ + L + T DY
Sbjct: 423 TTVSNVYAIGDINA---------GKPQLTPVAIQAGRYLARRLFAGATELTDY 466
>pdb|2ZBW|A Chain A, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
pdb|2ZBW|B Chain B, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
Length = 335
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 295 IDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKM 351
++ D ++I G + P GL I+VD T +PG++A GD+ +P K+
Sbjct: 239 LEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTXATSIPGVYACGDIVTYPGKL 295
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 32/233 (13%)
Query: 166 LIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAA 225
+I+ATG ++PE G G+ +D L S K Y+ +E A
Sbjct: 253 IILATG-ERPKYPEIPGAVEYGI-------TSDDLFSLPYFPGKTLVIGASYVALECAGF 304
Query: 226 AVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIKNLE-AGSDG 282
D T++ +L R F +A++ + +GVKF K V IK L+ ++
Sbjct: 305 LASLGGDVTVMV--RSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTEN 362
Query: 283 RVAAVKLEDGSTIDA-------DTIVIGIGAKPTVSPF--ERVGLNSSVGG-IQVDGQFR 332
+ L G D +T++ +G +P +S E VG+ G + +
Sbjct: 363 NKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQ 422
Query: 333 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDY 385
T + ++AIGD+ A + + A Q+ ++ + L + T DY
Sbjct: 423 TTVSNVYAIGDINA---------GKPQLTPVAIQAGRYLARRLFAGATELTDY 466
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 32/233 (13%)
Query: 166 LIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGMEVAAA 225
+I+ATG ++PE G G+ +D L S K Y+ +E A
Sbjct: 253 IILATG-ERPKYPEIPGAVEYGI-------TSDDLFSLPYFPGKTLVIGASYVALECAGF 304
Query: 226 AVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK--VGASIKNLE-AGSDG 282
D T++ +L R F +A++ + +GVKF K V IK L+ ++
Sbjct: 305 LASLGGDVTVMV--RSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTEN 362
Query: 283 RVAAVKLEDGSTIDA-------DTIVIGIGAKPTVSPF--ERVGLNSSVGG-IQVDGQFR 332
+ L G D +T++ +G +P +S E VG+ G + +
Sbjct: 363 NKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQ 422
Query: 333 TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDY 385
T + ++AIGD+ A + + A Q+ ++ + L + T DY
Sbjct: 423 TTVSNVYAIGDINA---------GKPQLTPVAIQAGRYLARRLFAGATELTDY 466
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 23/216 (10%)
Query: 143 VTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALIS 202
+T+ D +Q T K++ + + I+A G ++ P ++P I D + A AL
Sbjct: 129 LTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLP-----FIPEDPRIIDSSGALAL-K 182
Query: 203 SLEKAKKXXXXXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN 262
+ + M + +G +LD ++ L + + +QN
Sbjct: 183 EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVV------EMMDGLMQGADRDLVKVWQKQN 236
Query: 263 GVKFVKVGASIKNL--EAGSDGRVAAVKLEDGSTIDA----DTIVIGIGAKPT--VSPFE 314
+F + + K + E DG V E + D +++ G P + E
Sbjct: 237 EYRFDNIMVNTKTVAVEPKEDG--VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAE 294
Query: 315 RVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPL 349
+ G+ + G I+VD Q RT +P I+AIGD+ P+
Sbjct: 295 KAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPM 330
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 298 DTIVIGIGAKPT--VSPFERVGLN-SSVGGIQVDGQFRTRMPGIFAIGDVAAFPL 349
D +++ G P + E+ G+ + G I+VD Q RT +P I+AIGD+ P+
Sbjct: 276 DAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPM 330
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 298 DTIVIGIGAKPTVSPFERVGLNSSV-----GGIQVDGQFRTRMPGIFAIGDVAAFPLKMY 352
D +++ +G +P + + +S V G I VD +T +PG+FAIGDV M
Sbjct: 270 DKLIVAVGRRPVTTDL--LAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGA--ML 325
Query: 353 DRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLP 387
A E V A + A H AQ + YD +P
Sbjct: 326 AHKASEEGVMVAERIAGH------KAQMN-YDLIP 353
>pdb|1FL2|A Chain A, Catalytic Core Component Of The Alkylhydroperoxide
Reductase Ahpf From E.Coli
Length = 310
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 79/207 (38%), Gaps = 29/207 (14%)
Query: 155 TNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRD--VADADALISSLEKAKKXXX 212
T SG +LK S+IVATG +PG R V L K K+
Sbjct: 96 TASGAVLKARSIIVATGAKWRNMN------VPGEDQYRTKGVTYCPHCDGPLFKGKRVAV 149
Query: 213 XXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN--GVKFVKVG 270
G+E A +D I LL+ F P + + +Q+ Q +K V +
Sbjct: 150 IGGGNSGVEAA-------IDLAGIVEHVTLLE--FAPEM--KADQVLQDKLRSLKNVDII 198
Query: 271 ASIKNLEAGSDGRVAAVKLE-------DGSTIDADTIVIGIGAKPTVSPFERVGLNSSVG 323
+ + E DG V LE D I+ I + IG P + E + +G
Sbjct: 199 LNAQTTEVKGDGS-KVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMG 257
Query: 324 GIQVDGQFRTRMPGIFAIGDVAAFPLK 350
I +D + T + G+FA GD P K
Sbjct: 258 EIIIDAKCETNVKGVFAAGDCTTVPYK 284
>pdb|3T2Y|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase
His132ala Variant From Acidithiobacillus Ferrooxidans
With Bound Disulfide
Length = 434
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 38/132 (28%)
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286
VGWK I FP H ++R +AQ EQ+ D
Sbjct: 50 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQI----------------------DAEAQN 87
Query: 287 VKLEDGSTIDADTIVIGIGAKPTVSPFERV-GLNSSVGGIQ----VDGQFRT-------- 333
+ L DG+T+ D ++I G K FE V G + G +Q VD R
Sbjct: 88 ITLADGNTVHYDYLMIATGPKLA---FENVPGSDPHEGPVQSICTVDAAERAFAEYQALL 144
Query: 334 RMPGIFAIGDVA 345
R PG IG +A
Sbjct: 145 REPGPIVIGAMA 156
>pdb|1HYU|A Chain A, Crystal Structure Of Intact Ahpf
Length = 521
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 27/206 (13%)
Query: 155 TNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRD--VADADALISSLEKAKKXXX 212
T SG +LK S+I+ATG +PG R V L K K+
Sbjct: 307 TASGAVLKARSIIIATGAKWRNM------NVPGEDQYRTKGVTYCPHCDGPLFKGKRVAV 360
Query: 213 XXXXYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN--GVKFVKVG 270
G+E A +D I LL+ F P + + +Q+ Q +K V +
Sbjct: 361 IGGGNSGVEAA-------IDLAGIVEHVTLLE--FAPEM--KADQVLQDKVRSLKNVDII 409
Query: 271 ASIKNLEAGSDG-RVAAVKLEDGSTIDADTIVIG-----IGAKPTVSPFERVGLNSSVGG 324
+ + E DG +V ++ D + D ++ + IG P E + +G
Sbjct: 410 LNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMGE 469
Query: 325 IQVDGQFRTRMPGIFAIGDVAAFPLK 350
I +D + T + G+FA GD P K
Sbjct: 470 IIIDAKCETSVKGVFAAGDCTTVPYK 495
>pdb|3CIR|A Chain A, E. Coli Quinol Fumarate Reductase Frda T234a Mutation
pdb|3CIR|M Chain M, E. Coli Quinol Fumarate Reductase Frda T234a Mutation
Length = 602
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 304 IGAKPTVSPFE-RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354
+G P P R + ++GGI+ D TR+ G+FA+G+ ++ L +R
Sbjct: 340 VGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANR 391
>pdb|2B76|A Chain A, E. Coli Quinol Fumarate Reductase Frda E49q Mutation
pdb|2B76|M Chain M, E. Coli Quinol Fumarate Reductase Frda E49q Mutation
Length = 602
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 304 IGAKPTVSPFE-RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354
+G P P R + ++GGI+ D TR+ G+FA+G+ ++ L +R
Sbjct: 340 VGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANR 391
>pdb|1KF6|A Chain A, E. Coli Quinol-Fumarate Reductase With Bound Inhibitor
Hqno
pdb|1KF6|M Chain M, E. Coli Quinol-Fumarate Reductase With Bound Inhibitor
Hqno
pdb|1KFY|A Chain A, Quinol-fumarate Reductase With Quinol Inhibitor
2-[1-(4-chloro- Phenyl)-ethyl]-4,6-dinitro-phenol
pdb|1KFY|M Chain M, Quinol-fumarate Reductase With Quinol Inhibitor
2-[1-(4-chloro- Phenyl)-ethyl]-4,6-dinitro-phenol
pdb|1L0V|A Chain A, Quinol-Fumarate Reductase With Menaquinol Molecules
pdb|1L0V|M Chain M, Quinol-Fumarate Reductase With Menaquinol Molecules
Length = 602
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 304 IGAKPTVSPFE-RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354
+G P P R + ++GGI+ D TR+ G+FA+G+ ++ L +R
Sbjct: 340 VGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANR 391
>pdb|3SXI|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase
Cys128ala Variant From Acidithiobacillus Ferrooxidans
Complexed With Decylubiquinone
pdb|3T14|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase
Cys128ala Variant From Acidithiobacillus Ferrooxidans
With Bound Disulfide
pdb|3T2K|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase
Cys128ala Variant From Acidithiobacillus Ferrooxidans
With Bound Trisulfane
Length = 437
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 32/129 (24%)
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286
VGWK I FP H ++R +AQ EQ+ D
Sbjct: 53 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQI----------------------DAEAQN 90
Query: 287 VKLEDGSTIDADTIVIGIGAK----------PTVSPFERVGLNSSVGGIQVDGQFRTRMP 336
+ L DG+T+ D ++I G K P P + + + Q R P
Sbjct: 91 ITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSIATVDHAERAFAEYQALLREP 150
Query: 337 GIFAIGDVA 345
G IG +A
Sbjct: 151 GPIVIGAMA 159
>pdb|3P4R|A Chain A, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In
Complex With Glutarate
pdb|3P4R|M Chain M, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In
Complex With Glutarate
pdb|3P4P|A Chain A, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In
Complex With Fumarate
pdb|3P4P|M Chain M, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In
Complex With Fumarate
pdb|3P4Q|A Chain A, Crystal Structure Of Menaquinol:oxidoreductase In Complex
With Oxaloacetate
pdb|3P4Q|M Chain M, Crystal Structure Of Menaquinol:oxidoreductase In Complex
With Oxaloacetate
pdb|3P4S|A Chain A, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In
Complex With A 3-Nitropropionate Adduct
pdb|3P4S|M Chain M, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In
Complex With A 3-Nitropropionate Adduct
Length = 577
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 304 IGAKPTVSPFE-RVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354
+G P P R + ++GGI+ D TR+ G+FA+G+ ++ L +R
Sbjct: 340 VGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANR 391
>pdb|3T2Z|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase From
Acidithiobacillus Ferrooxidans
pdb|3T2Z|B Chain B, Crystal Structure Of Sulfide:quinone Oxidoreductase From
Acidithiobacillus Ferrooxidans
pdb|3T31|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase From
Acidithiobacillus Ferrooxidans In Complex With
Decylubiquinone
pdb|3SZ0|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase From
Acidithiobacillus Ferrooxidans In Complex With Sodium
Selenide
pdb|3SZC|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase From
Acidithiobacillus Ferrooxidans In Complex With Gold (I)
Cyanide
pdb|3T0K|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase From
Acidithiobacillus Ferrooxidans With Bound Trisulfide And
Decylubiquinone
Length = 437
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 22/81 (27%)
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286
VGWK I FP H ++R +AQ EQ+ D
Sbjct: 53 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQI----------------------DAEAQN 90
Query: 287 VKLEDGSTIDADTIVIGIGAK 307
+ L DG+T+ D ++I G K
Sbjct: 91 ITLADGNTVHYDYLMIATGPK 111
>pdb|3SZW|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase
Cys128ser Variant From Acidithiobacillus Ferrooxidans In
Complex With Decylubiquinone
Length = 437
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 22/81 (27%)
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286
VGWK I FP H ++R +AQ EQ+ D
Sbjct: 53 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQI----------------------DAEAQN 90
Query: 287 VKLEDGSTIDADTIVIGIGAK 307
+ L DG+T+ D ++I G K
Sbjct: 91 ITLADGNTVHYDYLMIATGPK 111
>pdb|3SY4|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase
Ser126ala Variant From Acidithiobacillus Ferrooxidans
pdb|3SYI|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase
Ser126ala Variant From Acidithiobacillus Ferrooxidans
Using 7.0 Kev Diffraction Data
Length = 437
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 22/81 (27%)
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286
VGWK I FP H ++R +AQ EQ+ D
Sbjct: 53 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQI----------------------DAEAQN 90
Query: 287 VKLEDGSTIDADTIVIGIGAK 307
+ L DG+T+ D ++I G K
Sbjct: 91 ITLADGNTVHYDYLMIATGPK 111
>pdb|3KPK|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase From
Acidithiobacillus Ferrooxidans, C160a Mutant
Length = 434
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 22/81 (27%)
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286
VGWK I FP H ++R +AQ EQ+ D
Sbjct: 50 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQI----------------------DAEAQN 87
Query: 287 VKLEDGSTIDADTIVIGIGAK 307
+ L DG+T+ D ++I G K
Sbjct: 88 ITLADGNTVHYDYLMIATGPK 108
>pdb|3SX6|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase
Cys356ala Variant From Acidithiobacillus Ferrooxidans
Complexed With Decylubiquinone
Length = 437
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 22/81 (27%)
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286
VGWK I FP H ++R +AQ EQ+ D
Sbjct: 53 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQI----------------------DAEAQN 90
Query: 287 VKLEDGSTIDADTIVIGIGAK 307
+ L DG+T+ D ++I G K
Sbjct: 91 ITLADGNTVHYDYLMIATGPK 111
>pdb|1CHU|A Chain A, Structure Of L-Aspartate Oxidase: Implications For The
Succinate Dehydrogenase FUMARATE REDUCATSE FAMILY
Length = 540
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 301 VIGIGAKPTVSPFERV-GLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 356
++G+G T P V + + GG+ VD RT + G++AIG+V+ L +R A
Sbjct: 332 LLGLGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMA 388
>pdb|3SZF|A Chain A, Crystal Structure Of Sulfide:quinone Oxidoreductase H198a
Variant From Acidithiobacillus Ferrooxidans In Complex
With Bound Trisulfide And Decylubiquinone
Length = 437
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 22/81 (27%)
Query: 227 VGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286
VGWK I FP H ++R +AQ EQ+ D
Sbjct: 53 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQI----------------------DAEAQN 90
Query: 287 VKLEDGSTIDADTIVIGIGAK 307
+ L DG+T+ D ++I G K
Sbjct: 91 ITLADGNTVHYDYLMIATGPK 111
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 33/261 (12%)
Query: 113 GFHTCVGSGGERQTPE---WYKEKGIEMIYQDPVTSIDIE-----------KQTLITNSG 158
GF +C G R E Y + + IYQ+ +T IE + I SG
Sbjct: 86 GFPSCEGKFNWRVIKEKRDAYVSR-LNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG 144
Query: 159 KLLKYGSLIVATGCTASRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXY 217
K +++ATG S E +I G G+ +D E + Y
Sbjct: 145 KKYTAPHILIATGGMPSTPHESQIPGASLGI-------TSDGFFQLEELPGRSVIVGAGY 197
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASIK 274
I +E+A T+++ + +L R F ++ + + GV KF +V K
Sbjct: 198 IAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNXTEELENAGVEVLKFSQVKEVKK 256
Query: 275 NLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328
L V AV +L + I D D ++ IG P ++G+ + G I VD
Sbjct: 257 TLSGLEVSMVTAVPGRLPVMTMIPDVDXLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD 316
Query: 329 GQFRTRMPGIFAIGDVAAFPL 349
T + GI+A+GDV L
Sbjct: 317 EFQNTNVKGIYAVGDVCGKAL 337
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 33/261 (12%)
Query: 113 GFHTCVGSGGERQTPE---WYKEKGIEMIYQDPVTSIDIE-----------KQTLITNSG 158
GF +C G R E Y + + IYQ+ +T IE + I SG
Sbjct: 86 GFPSCEGKFNWRVIKEKRDAYVSR-LNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG 144
Query: 159 KLLKYGSLIVATGCTASRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXY 217
K +++ATG S E +I G G+ +D E + Y
Sbjct: 145 KKYTAPHILIATGGMPSTPHESQIPGASLGI-------TSDGFFQLEELPGRSVIVGAGY 197
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASIK 274
I +E+A T+++ + +L R F ++ + + GV KF +V K
Sbjct: 198 IAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKEVKK 256
Query: 275 NLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328
L V AV +L + I D D ++ IG P ++G+ + G I VD
Sbjct: 257 TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD 316
Query: 329 GQFRTRMPGIFAIGDVAAFPL 349
T + GI+A+GDV L
Sbjct: 317 EFQNTNVKGIYAVGDVCGKAL 337
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 33/261 (12%)
Query: 113 GFHTCVGSGGERQTPE---WYKEKGIEMIYQDPVTSIDIE-----------KQTLITNSG 158
GF +C G R E Y + + IYQ+ +T IE + I SG
Sbjct: 85 GFPSCEGKFNWRVIKEKRDAYVSR-LNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG 143
Query: 159 KLLKYGSLIVATGCTASRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXY 217
K +++ATG S E +I G G+ +D E + Y
Sbjct: 144 KKYTAPHILIATGGMPSTPHESQIPGASLGI-------TSDGFFQLEELPGRSVIVGAGY 196
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASIK 274
I +E+A T+++ + +L R F ++ + + GV KF +V K
Sbjct: 197 IAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKEVKK 255
Query: 275 NLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328
L V AV +L + I D D ++ IG P ++G+ + G I VD
Sbjct: 256 TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD 315
Query: 329 GQFRTRMPGIFAIGDVAAFPL 349
T + GI+A+GDV L
Sbjct: 316 EFQNTNVKGIYAVGDVCGKAL 336
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 33/261 (12%)
Query: 113 GFHTCVGSGGERQTPE---WYKEKGIEMIYQDPVTSIDIE-----------KQTLITNSG 158
GF +C G R E Y + + IYQ+ +T IE + I SG
Sbjct: 86 GFPSCEGKFNWRVIKEKRDAYVSR-LNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG 144
Query: 159 KLLKYGSLIVATGCTASRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXY 217
K +++ATG S E +I G G+ +D E + Y
Sbjct: 145 KKYTAPHILIATGGMPSTPHESQIPGASLGI-------TSDGFFQLEELPGRSVIVGAGY 197
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASIK 274
I +E+A T+++ + +L R F ++ + + GV KF +V K
Sbjct: 198 IAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKEVKK 256
Query: 275 NLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328
L V AV +L + I D D ++ IG P ++G+ + G I VD
Sbjct: 257 TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD 316
Query: 329 GQFRTRMPGIFAIGDVAAFPL 349
T + GI+A+GDV L
Sbjct: 317 EFQNTNVKGIYAVGDVCGKAL 337
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 33/261 (12%)
Query: 113 GFHTCVGSGGERQTPE---WYKEKGIEMIYQDPVTSIDIE-----------KQTLITNSG 158
GF +C G R E Y + + IYQ+ +T IE + I SG
Sbjct: 86 GFPSCEGKFNWRVIKEKRDAYVSR-LNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG 144
Query: 159 KLLKYGSLIVATGCTASRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXY 217
K +++ATG S E +I G G+ +D E + Y
Sbjct: 145 KKYTAPHILIATGGMPSTPHESQIPGASLGI-------TSDGFFQLEELPGRSVIVGAGY 197
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASIK 274
I +E+A T+++ + +L R F ++ + + GV KF +V K
Sbjct: 198 IAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKEVKK 256
Query: 275 NLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328
L V AV +L + I D D ++ IG P ++G+ + G I VD
Sbjct: 257 TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD 316
Query: 329 GQFRTRMPGIFAIGDVAAFPL 349
T + GI+A+GDV L
Sbjct: 317 EFQNTNVKGIYAVGDVCGKAL 337
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 33/261 (12%)
Query: 113 GFHTCVGSGGERQTPE---WYKEKGIEMIYQDPVTSIDIE-----------KQTLITNSG 158
GF +C G R E Y + + IYQ+ +T IE + I SG
Sbjct: 87 GFPSCEGKFNWRVIKEKRDAYVSR-LNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG 145
Query: 159 KLLKYGSLIVATGCTASRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXY 217
K +++ATG S E +I G G+ +D E + Y
Sbjct: 146 KKYTAPHILIATGGMPSTPHESQIPGASLGI-------TSDGFFQLEELPGRSVIVGAGY 198
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASIK 274
I +E+A T+++ + +L R F ++ + + GV KF +V K
Sbjct: 199 IAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKEVKK 257
Query: 275 NLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328
L V AV +L + I D D ++ IG P ++G+ + G I VD
Sbjct: 258 TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD 317
Query: 329 GQFRTRMPGIFAIGDVAAFPL 349
T + GI+A+GDV L
Sbjct: 318 EFQNTNVKGIYAVGDVCGKAL 338
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 33/261 (12%)
Query: 113 GFHTCVGSGGERQTPE---WYKEKGIEMIYQDPVTSIDIE-----------KQTLITNSG 158
GF +C G R E Y + + IYQ+ +T IE + I SG
Sbjct: 69 GFPSCEGKFNWRVIKEKRDAYVSR-LNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG 127
Query: 159 KLLKYGSLIVATGCTASRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXY 217
K +++ATG S E +I G G+ +D E + Y
Sbjct: 128 KKYTAPHILIATGGMPSTPHESQIPGASLGI-------TSDGFFQLEELPGRSVIVGAGY 180
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASIK 274
I +E+A T+++ + +L R F ++ + + GV KF +V K
Sbjct: 181 IAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKEVKK 239
Query: 275 NLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328
L V AV +L + I D D ++ IG P ++G+ + G I VD
Sbjct: 240 TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD 299
Query: 329 GQFRTRMPGIFAIGDVAAFPL 349
T + GI+A+GDV L
Sbjct: 300 EFQNTNVKGIYAVGDVCGKAL 320
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 33/261 (12%)
Query: 113 GFHTCVGSGGERQTPE---WYKEKGIEMIYQDPVTSIDIE-----------KQTLITNSG 158
GF +C G R E Y + + IYQ+ +T IE + I SG
Sbjct: 69 GFPSCEGKFNWRVIKEKRDAYVSR-LNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG 127
Query: 159 KLLKYGSLIVATGCTASRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXY 217
K +++ATG S E +I G G+ +D E + Y
Sbjct: 128 KKYTAPHILIATGGMPSTPHESQIPGASLGI-------TSDGFFQLEELPGRSVIVGAGY 180
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASIK 274
I +E+A T+++ + +L R F ++ + + GV KF +V K
Sbjct: 181 IAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKEVKK 239
Query: 275 NLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328
L V AV +L + I D D ++ IG P ++G+ + G I VD
Sbjct: 240 TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD 299
Query: 329 GQFRTRMPGIFAIGDVAAFPL 349
T + GI+A+GDV L
Sbjct: 300 EFQNTNVKGIYAVGDVCGKAL 320
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 26/194 (13%)
Query: 161 LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGM 220
+ + + I+ATG +++R +PG +V + I S E K IGM
Sbjct: 135 VTFDNAIIATG-SSTRL-------VPGTSLSANVVTYEEQILSRELPKSIIIAGAGAIGM 186
Query: 221 EVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASI---KNLE 277
E + +D TI+ L R A +++ +Q F K+G +I +E
Sbjct: 187 EFGYVLKNYGVDVTIV----EFLPRALPNEDADVSKEIEKQ----FKKLGVTILTATKVE 238
Query: 278 AGSDG--RVAAVKLEDG--STIDADTIVIGIGAKPTVSPF--ERVGLN-SSVGGIQVDGQ 330
+ +DG +V +DG + A+ ++ IG P V + ++ G+ + I VD
Sbjct: 239 SIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDY 298
Query: 331 FRTRMPGIFAIGDV 344
RT + I+AIGDV
Sbjct: 299 MRTNVGHIYAIGDV 312
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 33/261 (12%)
Query: 113 GFHTCVGSGGERQTPE---WYKEKGIEMIYQDPVTSIDIE-----------KQTLITNSG 158
GF +C G R E Y + + IYQ+ +T IE + I SG
Sbjct: 86 GFPSCEGKFNWRVIKEKRDAYVSR-LNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG 144
Query: 159 KLLKYGSLIVATGCTASRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXY 217
K +++ATG S E +I G G+ +D E + Y
Sbjct: 145 KKYTAPHILIATGGMPSTPHESQIPGASLGI-------TSDGFFQLEELPGRSVIVGAGY 197
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASIK 274
I +E+A T+++ + +L R F ++ + + GV KF +V K
Sbjct: 198 IAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKEVKK 256
Query: 275 NLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328
L V AV +L + I D D ++ IG P ++G+ + G I VD
Sbjct: 257 TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD 316
Query: 329 GQFRTRMPGIFAIGDVAAFPL 349
T + GI+A+GDV L
Sbjct: 317 EFQNTNVKGIYAVGDVCGKAL 337
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 217 YIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV---KFVKVGASI 273
YI +E+A T+++ + +L R F ++ + + GV KF +V
Sbjct: 182 YIAVEMAGILSALGSKTSLMIRHDKVL-RSFDSMISTNCTEELENAGVEVLKFSQVKEVK 240
Query: 274 KNLEAGSDGRVAAV--KLEDGSTI-DADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQV 327
K L V AV +L + I D D ++ IG P ++G+ + G I V
Sbjct: 241 KTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIV 300
Query: 328 DGQFRTRMPGIFAIGDVAAFPL 349
D T + GI+A+GDV L
Sbjct: 301 DEFQNTNVKGIYAVGDVCGKAL 322
>pdb|3LZW|A Chain A, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form I)
pdb|3LZX|A Chain A, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form Ii)
pdb|3LZX|B Chain B, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form Ii)
Length = 332
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 287 VKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAA 346
VK + ++ D +++ G ++ P + GL+ I V T + G FA GD+
Sbjct: 229 VKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICT 288
Query: 347 FPLKM 351
+ K+
Sbjct: 289 YEGKV 293
>pdb|3F8P|A Chain A, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|B Chain B, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|C Chain C, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|D Chain D, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8R|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
Length = 323
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 256 EQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGST-----IDADTIVIGIGAKPTV 310
E + ++ V+FV + + +K ++ D V V +E+ T ++ + + I IG P
Sbjct: 197 ETVKKKPNVEFV-LNSVVKEIKG--DKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPT 253
Query: 311 SPFERVGLNSSVGG-IQVDGQFRTRMPGIFAIGDVAA 346
+ G+ + G I+VD RT +PG+FA GD +
Sbjct: 254 DFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTS 290
>pdb|3F8D|A Chain A, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|B Chain B, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|C Chain C, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|D Chain D, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
Length = 323
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 256 EQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGST-----IDADTIVIGIGAKPTV 310
E + ++ V+FV + + +K ++ D V V +E+ T ++ + + I IG P
Sbjct: 197 ETVKKKPNVEFV-LNSVVKEIKG--DKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPT 253
Query: 311 SPFERVGLNSSVGG-IQVDGQFRTRMPGIFAIGDVAA 346
+ G+ + G I+VD RT +PG+FA GD +
Sbjct: 254 DFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTS 290
>pdb|1KNP|A Chain A, E. Coli L-aspartate Oxidase: Mutant R386l In Complex With
Succinate
pdb|1KNR|A Chain A, L-aspartate Oxidase: R386l Mutant
Length = 540
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 301 VIGIGAKPTVSPFERV-GLNSSVGGIQVDGQFRTRMPGIFAIGDVA 345
++G+G T P V + + GG+ VD RT + G++AIG+V+
Sbjct: 332 LLGLGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVS 377
>pdb|2ZJJ|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In
Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic
Acid (2-Mercapto-Ethyl)- Amide
Length = 405
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKI 181
WY E Y+ + ++I Q L + K Y IV +GCT R P+K+
Sbjct: 209 WYTPIRREWYYEVIIVRVEINGQDLKMDC-KEYNYDKSIVDSGCTNLRLPKKV 260
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 218 IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277
IG+E+ + + T++ + L + +A+ +++ + G+K + +GA + E
Sbjct: 191 IGLELGSVWARLGAEVTVLEAMDKFLPAV-DEQVAKEAQKILTKQGLKIL-LGARVTGTE 248
Query: 278 AGSDGRVAAVKLED--GSTIDA-DTIVIGIGAKPTVSPFERVGLNSSV-----GGIQVDG 329
+ + VK D G A D +++ +G +P + + +S V G I VD
Sbjct: 249 VKN--KQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDL--LAADSGVTLDERGFIYVDD 304
Query: 330 QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLP 387
T +PG++AIGDV M A E V A + A H AQ + YD +P
Sbjct: 305 YCATSVPGVYAIGDVVRGA--MLAHKASEEGVVVAERIAGH------KAQMN-YDLIP 353
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 323 GGIQVDGQFRTRMPGIFAIGDVAAFPL 349
G I+V+ + T +PG++AIGD A PL
Sbjct: 289 GFIRVNARMETSVPGVYAIGDAARPPL 315
>pdb|2GKI|A Chain A, Heavy And Light Chain Variable Single Domains Of An
Anti-dna Binding Antibody Hydrolyze Both Double- And
Single-stranded Dnas Without Sequence Specificity
pdb|2GKI|B Chain B, Heavy And Light Chain Variable Single Domains Of An
Anti-dna Binding Antibody Hydrolyze Both Double- And
Single-stranded Dnas Without Sequence Specificity
Length = 291
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 242 LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIK 274
LL LFTP R QL QQ+G + VK GAS+K
Sbjct: 10 LLPLLFTPVTKAREVQL-QQSGPELVKPGASVK 41
>pdb|1E7P|A Chain A, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|1E7P|D Chain D, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|2BS3|A Chain A, Glu C180-> Gln Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS3|D Chain D, Glu C180-> Gln Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS4|A Chain A, Glu C180-> Ile Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS4|D Chain D, Glu C180-> Ile Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|1E7P|G Chain G, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|1E7P|J Chain J, Quinol:fumarate Reductase From Wolinella Succinogenes
Length = 656
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 321 SVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR-------TARVEHVDHARQSAQHCIK 373
S+GGI+ D + ++ G+F+ G+ A + + ++R A V + A+HC
Sbjct: 371 SMGGIRTDYRGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCAN 430
Query: 374 ALLSAQTHTYD 384
+ +T T +
Sbjct: 431 TQVDLETKTLE 441
>pdb|1QLB|A Chain A, Respiratory Complex Ii-Like Fumarate Reductase From
Wolinella Succinogenes
pdb|1QLB|D Chain D, Respiratory Complex Ii-Like Fumarate Reductase From
Wolinella Succinogenes
Length = 656
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 321 SVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR-------TARVEHVDHARQSAQHCIK 373
S+GGI+ D + ++ G+F+ G+ A + + ++R A V + A+HC
Sbjct: 371 SMGGIRTDYRGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCAN 430
Query: 374 ALLSAQTHTYD 384
+ +T T +
Sbjct: 431 TQVDLETKTLE 441
>pdb|2BS2|A Chain A, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|2BS2|D Chain D, Quinol:fumarate Reductase From Wolinella Succinogenes
Length = 660
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 321 SVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR-------TARVEHVDHARQSAQHCIK 373
S+GGI+ D + ++ G+F+ G+ A + + ++R A V + A+HC
Sbjct: 371 SMGGIRTDYRGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCAN 430
Query: 374 ALLSAQTHTYD 384
+ +T T +
Sbjct: 431 TQVDLETKTLE 441
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 26/194 (13%)
Query: 161 LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKXXXXXXXYIGM 220
+ + + I+ATG +++R +PG +V + I S E K IG
Sbjct: 133 VTFDNAIIATG-SSTRL-------VPGTSLSANVVTYEEQILSRELPKSIIIAGAGAIGX 184
Query: 221 EVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASI---KNLE 277
E + +D TI+ L R A +++ +Q F K+G +I +E
Sbjct: 185 EFGYVLKNYGVDVTIV----EFLPRALPNEDADVSKEIEKQ----FKKLGVTILTATKVE 236
Query: 278 AGSDG--RVAAVKLEDG--STIDADTIVIGIGAKPTVSPF--ERVGLN-SSVGGIQVDGQ 330
+ +DG +V +DG + A+ ++ IG P V + ++ G+ + I VD
Sbjct: 237 SIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDY 296
Query: 331 FRTRMPGIFAIGDV 344
RT + I+AIGDV
Sbjct: 297 XRTNVGHIYAIGDV 310
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 294 TIDADTIVIGIGAKPTVSPFERVGLN---SSVGGIQVDGQFRTRMPGIFAIGDV 344
T+ + +++ +G +P +N + G +++ F T +P ++AIGDV
Sbjct: 262 TVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSIPDVYAIGDV 315
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,319,970
Number of Sequences: 62578
Number of extensions: 610118
Number of successful extensions: 1807
Number of sequences better than 100.0: 136
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 1654
Number of HSP's gapped (non-prelim): 159
length of query: 489
length of database: 14,973,337
effective HSP length: 103
effective length of query: 386
effective length of database: 8,527,803
effective search space: 3291731958
effective search space used: 3291731958
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)