Query 011267
Match_columns 489
No_of_seqs 333 out of 3500
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 04:36:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 4.8E-59 1.6E-63 473.6 46.0 396 49-470 7-407 (415)
2 3fg2_P Putative rubredoxin red 100.0 1.4E-58 4.9E-63 468.3 46.4 394 51-471 1-397 (404)
3 3ef6_A Toluene 1,2-dioxygenase 100.0 1.4E-58 4.9E-63 469.0 44.0 391 51-470 2-395 (410)
4 1q1r_A Putidaredoxin reductase 100.0 2.3E-54 7.8E-59 440.6 45.2 403 50-477 3-413 (431)
5 3klj_A NAD(FAD)-dependent dehy 100.0 1.5E-55 5.1E-60 441.8 33.5 375 48-478 6-384 (385)
6 2gqw_A Ferredoxin reductase; f 100.0 3.1E-54 1E-58 436.7 41.9 388 49-471 5-397 (408)
7 1m6i_A Programmed cell death p 100.0 5.2E-52 1.8E-56 429.9 30.9 405 48-462 8-479 (493)
8 4eqs_A Coenzyme A disulfide re 100.0 8.6E-49 2.9E-53 399.7 35.8 392 52-475 1-425 (437)
9 1xhc_A NADH oxidase /nitrite r 100.0 2.1E-48 7.1E-53 388.1 33.0 356 50-456 7-363 (367)
10 2bc0_A NADH oxidase; flavoprot 100.0 1.7E-48 5.9E-53 403.8 32.9 406 50-481 34-483 (490)
11 2cdu_A NADPH oxidase; flavoenz 100.0 1.4E-48 4.7E-53 401.0 28.9 402 52-479 1-436 (452)
12 3iwa_A FAD-dependent pyridine 100.0 6.3E-48 2.2E-52 398.2 33.3 412 50-479 2-450 (472)
13 3oc4_A Oxidoreductase, pyridin 100.0 2.1E-47 7.2E-52 392.0 35.5 396 52-474 3-426 (452)
14 2v3a_A Rubredoxin reductase; a 100.0 1.3E-46 4.4E-51 378.2 35.7 368 50-453 3-377 (384)
15 3kd9_A Coenzyme A disulfide re 100.0 1.5E-46 5.2E-51 385.4 36.0 399 50-476 2-430 (449)
16 1nhp_A NADH peroxidase; oxidor 100.0 2.8E-47 9.5E-52 390.7 28.3 403 52-481 1-437 (447)
17 3cgb_A Pyridine nucleotide-dis 100.0 2E-46 6.8E-51 387.4 32.2 403 51-480 36-473 (480)
18 3ntd_A FAD-dependent pyridine 100.0 6.2E-46 2.1E-50 392.1 33.4 386 52-462 2-437 (565)
19 3ics_A Coenzyme A-disulfide re 100.0 1.2E-43 4E-48 376.1 38.5 389 48-462 33-453 (588)
20 1mo9_A ORF3; nucleotide bindin 100.0 9.4E-42 3.2E-46 355.8 37.7 402 48-484 40-518 (523)
21 1zk7_A HGII, reductase, mercur 100.0 2.4E-41 8.2E-46 348.5 38.8 397 50-485 3-457 (467)
22 1xdi_A RV3303C-LPDA; reductase 100.0 1.2E-42 4.1E-47 361.0 28.4 400 51-485 2-466 (499)
23 1zmd_A Dihydrolipoyl dehydroge 100.0 1.2E-41 4E-46 351.5 34.4 403 49-483 4-466 (474)
24 2qae_A Lipoamide, dihydrolipoy 100.0 1.6E-41 5.6E-46 349.8 35.2 399 51-484 2-462 (468)
25 2hqm_A GR, grase, glutathione 100.0 2E-41 6.9E-46 349.8 34.2 397 50-481 10-472 (479)
26 1ebd_A E3BD, dihydrolipoamide 100.0 1.2E-41 4.2E-46 349.5 30.2 396 51-483 3-454 (455)
27 1ojt_A Surface protein; redox- 100.0 1.3E-41 4.4E-46 351.7 30.0 399 50-484 5-471 (482)
28 2a8x_A Dihydrolipoyl dehydroge 100.0 9.4E-42 3.2E-46 351.3 28.6 398 51-484 3-458 (464)
29 1dxl_A Dihydrolipoamide dehydr 100.0 2.5E-41 8.5E-46 348.9 31.2 401 49-484 4-464 (470)
30 1v59_A Dihydrolipoamide dehydr 100.0 1.9E-41 6.4E-46 350.5 29.3 402 50-484 4-472 (478)
31 1onf_A GR, grase, glutathione 100.0 4.9E-42 1.7E-46 356.2 22.6 401 51-480 2-496 (500)
32 3l8k_A Dihydrolipoyl dehydroge 100.0 9.4E-41 3.2E-45 343.8 30.9 400 51-484 4-458 (466)
33 2eq6_A Pyruvate dehydrogenase 100.0 1.4E-40 4.9E-45 342.1 32.1 396 50-485 5-456 (464)
34 2wpf_A Trypanothione reductase 100.0 8.7E-41 3E-45 346.0 30.2 317 130-480 117-475 (495)
35 3urh_A Dihydrolipoyl dehydroge 100.0 8.9E-41 3E-45 346.4 30.3 403 48-485 22-486 (491)
36 1fec_A Trypanothione reductase 100.0 5.1E-42 1.8E-46 354.9 20.8 317 130-480 113-471 (490)
37 1ges_A Glutathione reductase; 100.0 1.8E-40 6.2E-45 340.0 30.8 390 50-478 3-448 (450)
38 3lad_A Dihydrolipoamide dehydr 100.0 2.6E-39 9E-44 334.2 37.8 402 50-486 2-467 (476)
39 2r9z_A Glutathione amide reduc 100.0 1.5E-40 5.1E-45 341.7 26.4 391 50-480 3-448 (463)
40 3dk9_A Grase, GR, glutathione 100.0 4.4E-40 1.5E-44 340.1 29.9 396 49-478 18-476 (478)
41 1lvl_A Dihydrolipoamide dehydr 100.0 1.7E-39 5.9E-44 333.5 32.1 394 50-485 4-453 (458)
42 2yqu_A 2-oxoglutarate dehydrog 100.0 1.4E-39 4.7E-44 334.3 30.9 398 52-484 2-449 (455)
43 4dna_A Probable glutathione re 100.0 8.1E-41 2.8E-45 344.1 21.7 395 50-482 4-452 (463)
44 3dgz_A Thioredoxin reductase 2 100.0 4.2E-39 1.4E-43 333.4 34.0 400 49-482 4-477 (488)
45 4b1b_A TRXR, thioredoxin reduc 100.0 1.9E-40 6.4E-45 344.0 22.3 401 51-485 42-526 (542)
46 3dgh_A TRXR-1, thioredoxin red 100.0 2.4E-39 8.4E-44 334.8 30.5 399 49-481 7-476 (483)
47 3o0h_A Glutathione reductase; 100.0 1E-40 3.4E-45 345.2 19.8 394 50-481 25-471 (484)
48 3qfa_A Thioredoxin reductase 1 100.0 3.1E-39 1.1E-43 336.3 30.8 401 49-482 30-505 (519)
49 3ic9_A Dihydrolipoamide dehydr 100.0 7.1E-40 2.4E-44 339.1 24.8 397 51-485 8-468 (492)
50 4g6h_A Rotenone-insensitive NA 100.0 4.5E-40 1.5E-44 340.1 19.8 300 46-377 37-398 (502)
51 2vdc_G Glutamate synthase [NAD 100.0 7.2E-41 2.5E-45 341.8 9.4 330 3-377 60-441 (456)
52 2x8g_A Thioredoxin glutathione 100.0 3.7E-38 1.3E-42 334.3 30.1 401 49-482 105-584 (598)
53 1gte_A Dihydropyrimidine dehyd 100.0 3.7E-39 1.3E-43 359.3 15.3 349 2-391 116-526 (1025)
54 4gcm_A TRXR, thioredoxin reduc 100.0 9.5E-37 3.3E-41 297.6 25.5 293 48-376 3-302 (312)
55 2zbw_A Thioredoxin reductase; 100.0 3.1E-37 1E-41 304.1 21.9 298 49-377 3-314 (335)
56 3ab1_A Ferredoxin--NADP reduct 100.0 3.2E-37 1.1E-41 307.2 21.1 299 49-377 12-325 (360)
57 3lzw_A Ferredoxin--NADP reduct 100.0 7E-37 2.4E-41 300.8 17.3 293 50-377 6-312 (332)
58 3f8d_A Thioredoxin reductase ( 100.0 7E-36 2.4E-40 292.4 23.0 290 50-377 14-314 (323)
59 3vrd_B FCCB subunit, flavocyto 100.0 1.3E-35 4.5E-40 299.9 22.3 298 51-377 2-321 (401)
60 4a5l_A Thioredoxin reductase; 100.0 4.4E-36 1.5E-40 293.0 17.6 298 50-376 3-308 (314)
61 3hyw_A Sulfide-quinone reducta 100.0 6.5E-36 2.2E-40 304.4 19.4 301 52-377 3-330 (430)
62 3cty_A Thioredoxin reductase; 100.0 2.8E-35 9.5E-40 288.1 23.2 288 50-377 15-313 (319)
63 1fl2_A Alkyl hydroperoxide red 100.0 2.7E-35 9.1E-40 287.0 21.9 286 51-377 1-302 (310)
64 2q7v_A Thioredoxin reductase; 100.0 7.7E-35 2.6E-39 285.8 24.6 288 50-377 7-309 (325)
65 4fk1_A Putative thioredoxin re 100.0 1.1E-35 3.9E-40 288.9 18.4 285 48-376 3-296 (304)
66 3fbs_A Oxidoreductase; structu 100.0 3.1E-35 1.1E-39 284.4 20.5 278 51-377 2-289 (297)
67 2q0l_A TRXR, thioredoxin reduc 100.0 6.8E-35 2.3E-39 284.3 22.6 289 51-377 1-306 (311)
68 1trb_A Thioredoxin reductase; 100.0 4.8E-35 1.6E-39 286.4 21.2 293 49-377 3-311 (320)
69 3itj_A Thioredoxin reductase 1 100.0 2.8E-35 9.6E-40 290.1 18.8 295 48-377 19-332 (338)
70 3r9u_A Thioredoxin reductase; 100.0 1.5E-34 5.2E-39 281.9 23.2 289 50-377 3-309 (315)
71 3h8l_A NADH oxidase; membrane 100.0 1.6E-34 5.4E-39 292.7 24.1 288 52-377 2-333 (409)
72 3sx6_A Sulfide-quinone reducta 100.0 5.2E-35 1.8E-39 298.6 19.8 304 51-377 4-341 (437)
73 1vdc_A NTR, NADPH dependent th 100.0 3.9E-34 1.3E-38 281.6 21.4 301 49-377 6-320 (333)
74 1hyu_A AHPF, alkyl hydroperoxi 100.0 4.4E-33 1.5E-37 289.9 24.9 287 49-376 210-512 (521)
75 2a87_A TRXR, TR, thioredoxin r 100.0 1.9E-33 6.6E-38 277.0 20.6 288 49-376 12-312 (335)
76 3d1c_A Flavin-containing putat 100.0 3.2E-33 1.1E-37 279.0 22.0 308 50-379 3-338 (369)
77 4a9w_A Monooxygenase; baeyer-v 100.0 8.3E-34 2.8E-38 281.5 17.4 300 50-377 2-349 (357)
78 3h28_A Sulfide-quinone reducta 100.0 2.4E-33 8.3E-38 285.7 17.5 298 51-377 2-330 (430)
79 1cjc_A Protein (adrenodoxin re 100.0 9.9E-33 3.4E-37 282.3 12.4 291 50-377 5-392 (460)
80 1o94_A Tmadh, trimethylamine d 100.0 1.1E-32 3.9E-37 297.4 11.6 303 48-411 386-721 (729)
81 2gag_A Heterotetrameric sarcos 100.0 7.1E-31 2.4E-35 290.8 18.9 280 51-377 128-441 (965)
82 1lqt_A FPRA; NADP+ derivative, 100.0 9E-32 3.1E-36 274.9 10.5 286 50-377 2-384 (456)
83 1y56_A Hypothetical protein PH 100.0 6.9E-31 2.4E-35 271.7 13.8 253 51-377 108-374 (493)
84 2xve_A Flavin-containing monoo 100.0 8.6E-30 2.9E-34 261.5 20.7 289 52-379 3-340 (464)
85 3k30_A Histamine dehydrogenase 100.0 5.3E-31 1.8E-35 283.3 11.4 273 48-378 388-673 (690)
86 3s5w_A L-ornithine 5-monooxyge 100.0 7E-30 2.4E-34 262.8 19.2 314 50-375 29-444 (463)
87 1ps9_A 2,4-dienoyl-COA reducta 100.0 2.8E-29 9.5E-34 269.2 16.5 262 48-375 370-671 (671)
88 2gv8_A Monooxygenase; FMO, FAD 100.0 2.6E-28 8.9E-33 249.8 17.9 289 49-379 4-361 (447)
89 3gwf_A Cyclohexanone monooxyge 99.9 2.1E-26 7.3E-31 239.8 17.0 299 49-375 6-452 (540)
90 4ap3_A Steroid monooxygenase; 99.9 2.3E-24 7.8E-29 224.9 19.0 275 49-341 19-439 (549)
91 3uox_A Otemo; baeyer-villiger 99.9 5.2E-25 1.8E-29 229.5 14.1 189 49-242 7-220 (545)
92 1w4x_A Phenylacetone monooxyge 99.9 1.2E-23 4.3E-28 219.9 18.1 301 49-377 14-463 (542)
93 2ywl_A Thioredoxin reductase r 99.9 1.1E-21 3.8E-26 174.9 17.1 153 209-377 3-168 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 7.5E-18 2.6E-22 174.2 24.7 293 49-344 37-457 (501)
95 2e5v_A L-aspartate oxidase; ar 99.7 1.8E-18 6E-23 177.5 0.4 222 130-377 129-370 (472)
96 2cul_A Glucose-inhibited divis 99.6 2E-14 6.9E-19 133.2 17.9 155 208-377 4-229 (232)
97 3fpz_A Thiazole biosynthetic e 99.6 1.3E-18 4.6E-23 170.1 -14.6 297 4-376 18-321 (326)
98 2gqf_A Hypothetical protein HI 99.4 1.4E-14 4.8E-19 145.3 -1.4 121 50-175 3-169 (401)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.2 4.7E-12 1.6E-16 128.3 4.8 95 248-346 203-307 (431)
100 1rp0_A ARA6, thiazole biosynth 99.2 4.5E-11 1.5E-15 114.1 10.6 164 208-377 40-272 (284)
101 2bry_A NEDD9 interacting prote 99.2 3.7E-12 1.3E-16 131.4 0.3 170 3-175 22-231 (497)
102 2ywl_A Thioredoxin reductase r 99.1 2.3E-10 7.8E-15 101.2 8.3 108 51-175 1-111 (180)
103 1kf6_A Fumarate reductase flav 99.1 3.6E-10 1.2E-14 118.9 10.9 37 50-87 4-40 (602)
104 2zxi_A TRNA uridine 5-carboxym 99.0 3.4E-09 1.1E-13 110.2 14.5 159 50-236 26-218 (637)
105 3dme_A Conserved exported prot 99.0 1.8E-09 6.1E-14 106.5 11.6 68 248-318 149-219 (369)
106 2bry_A NEDD9 interacting prote 99.0 1.8E-10 6.2E-15 118.7 4.4 147 162-310 37-232 (497)
107 3pl8_A Pyranose 2-oxidase; sub 99.0 1E-12 3.5E-17 138.8 -13.2 60 259-319 270-335 (623)
108 4dgk_A Phytoene dehydrogenase; 98.9 1.1E-09 3.7E-14 113.1 8.6 57 249-307 221-277 (501)
109 1d4d_A Flavocytochrome C fumar 98.9 1.1E-08 3.6E-13 107.4 15.5 61 248-309 254-318 (572)
110 3axb_A Putative oxidoreductase 98.9 3.3E-09 1.1E-13 107.9 9.3 66 249-317 181-262 (448)
111 2cul_A Glucose-inhibited divis 98.9 3.6E-09 1.2E-13 97.6 8.1 117 50-175 2-126 (232)
112 3ces_A MNMG, tRNA uridine 5-ca 98.9 4.6E-09 1.6E-13 109.6 9.4 160 50-237 27-220 (651)
113 3pvc_A TRNA 5-methylaminomethy 98.9 8.3E-08 2.9E-12 102.9 19.3 67 248-318 411-478 (689)
114 3v76_A Flavoprotein; structura 98.8 2.1E-09 7E-14 108.0 6.1 124 47-174 23-187 (417)
115 2e4g_A Tryptophan halogenase; 98.8 1.4E-08 4.8E-13 106.0 12.0 59 249-309 194-253 (550)
116 1chu_A Protein (L-aspartate ox 98.8 1.5E-08 5E-13 105.4 11.6 35 50-88 7-41 (540)
117 3ps9_A TRNA 5-methylaminomethy 98.8 1.3E-07 4.3E-12 101.3 18.0 67 248-318 416-482 (676)
118 3nlc_A Uncharacterized protein 98.8 2.6E-08 9E-13 103.0 12.2 112 207-320 107-291 (549)
119 3alj_A 2-methyl-3-hydroxypyrid 98.8 1E-08 3.5E-13 101.9 8.4 122 49-175 9-161 (379)
120 2gag_B Heterotetrameric sarcos 98.8 7.1E-08 2.4E-12 96.4 14.1 66 249-318 174-239 (405)
121 1s3e_A Amine oxidase [flavin-c 98.7 1E-08 3.4E-13 106.4 7.2 50 255-307 218-267 (520)
122 3nlc_A Uncharacterized protein 98.7 3.3E-08 1.1E-12 102.2 10.2 123 50-175 106-278 (549)
123 2i0z_A NAD(FAD)-utilizing dehy 98.7 1.4E-08 4.8E-13 103.2 7.3 123 49-174 24-191 (447)
124 3dje_A Fructosyl amine: oxygen 98.7 2.1E-07 7.3E-12 94.1 15.5 60 248-309 160-222 (438)
125 1y56_B Sarcosine oxidase; dehy 98.7 2E-07 7E-12 92.4 13.7 66 248-317 148-213 (382)
126 4a9w_A Monooxygenase; baeyer-v 98.7 2E-07 6.8E-12 91.2 13.5 97 208-307 4-131 (357)
127 1yvv_A Amine oxidase, flavin-c 98.6 8.6E-08 2.9E-12 93.3 10.2 117 51-173 2-161 (336)
128 3nyc_A D-arginine dehydrogenas 98.6 7.6E-09 2.6E-13 102.6 2.5 66 248-318 153-218 (381)
129 2gf3_A MSOX, monomeric sarcosi 98.6 2.7E-07 9.2E-12 91.7 13.7 79 231-317 135-213 (389)
130 3v76_A Flavoprotein; structura 98.6 1.8E-07 6.1E-12 93.9 12.2 100 206-309 26-188 (417)
131 3lzw_A Ferredoxin--NADP reduct 98.6 1.8E-07 6.2E-12 90.6 11.7 100 208-310 8-128 (332)
132 2vou_A 2,6-dihydroxypyridine h 98.6 1.4E-07 4.9E-12 94.2 11.2 124 49-175 3-154 (397)
133 2x3n_A Probable FAD-dependent 98.6 4.1E-08 1.4E-12 98.1 6.5 123 50-175 5-167 (399)
134 4ap3_A Steroid monooxygenase; 98.6 7.1E-07 2.4E-11 92.8 16.1 104 207-311 21-164 (549)
135 3nrn_A Uncharacterized protein 98.6 8.8E-08 3E-12 96.5 8.5 57 248-309 188-244 (421)
136 3cgv_A Geranylgeranyl reductas 98.6 7.4E-08 2.5E-12 96.0 7.8 122 50-174 3-162 (397)
137 2xdo_A TETX2 protein; tetracyc 98.6 3.6E-07 1.2E-11 91.2 12.7 124 49-175 24-183 (398)
138 3fmw_A Oxygenase; mithramycin, 98.6 1.1E-07 3.7E-12 99.5 9.0 122 50-174 48-207 (570)
139 3nix_A Flavoprotein/dehydrogen 98.6 5.1E-08 1.8E-12 98.1 6.4 122 50-174 4-166 (421)
140 1rp0_A ARA6, thiazole biosynth 98.6 6.7E-08 2.3E-12 91.9 6.5 122 50-175 38-192 (284)
141 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 1.4E-07 4.6E-12 92.3 8.8 118 52-172 2-163 (342)
142 3i3l_A Alkylhalidase CMLS; fla 98.5 1.8E-07 6.3E-12 98.0 10.0 124 48-174 20-188 (591)
143 2gqf_A Hypothetical protein HI 98.5 5.1E-07 1.8E-11 90.1 12.7 99 208-309 5-169 (401)
144 3cp8_A TRNA uridine 5-carboxym 98.5 4.1E-08 1.4E-12 102.4 4.8 161 49-236 19-213 (641)
145 2zbw_A Thioredoxin reductase; 98.5 5.1E-07 1.8E-11 87.7 12.4 97 208-307 6-120 (335)
146 3ab1_A Ferredoxin--NADP reduct 98.5 7.7E-07 2.6E-11 87.5 13.7 99 207-307 14-130 (360)
147 3klj_A NAD(FAD)-dependent dehy 98.5 1.3E-07 4.3E-12 94.1 8.0 101 206-311 8-119 (385)
148 3itj_A Thioredoxin reductase 1 98.5 3.4E-07 1.2E-11 88.9 10.8 102 206-311 21-145 (338)
149 3gwf_A Cyclohexanone monooxyge 98.5 5.9E-07 2E-11 93.2 12.9 102 208-310 9-151 (540)
150 3sx6_A Sulfide-quinone reducta 98.5 1.3E-07 4.6E-12 95.7 7.8 101 207-313 4-117 (437)
151 1ryi_A Glycine oxidase; flavop 98.5 1.1E-07 3.8E-12 94.2 6.9 45 129-174 173-219 (382)
152 3fbs_A Oxidoreductase; structu 98.5 5.3E-07 1.8E-11 85.8 11.3 100 208-311 3-115 (297)
153 3oz2_A Digeranylgeranylglycero 98.5 1.8E-07 6.2E-12 92.9 8.2 39 49-90 2-40 (397)
154 1fl2_A Alkyl hydroperoxide red 98.5 5.9E-07 2E-11 86.2 11.5 101 209-310 3-117 (310)
155 1qo8_A Flavocytochrome C3 fuma 98.5 6.2E-07 2.1E-11 93.9 12.5 141 168-309 78-313 (566)
156 3alj_A 2-methyl-3-hydroxypyrid 98.5 7.6E-07 2.6E-11 88.3 12.3 97 207-309 11-161 (379)
157 2i0z_A NAD(FAD)-utilizing dehy 98.5 8.2E-07 2.8E-11 90.1 12.6 111 208-320 27-212 (447)
158 3ka7_A Oxidoreductase; structu 98.5 3.9E-07 1.3E-11 91.7 9.8 57 249-308 196-252 (425)
159 3f8d_A Thioredoxin reductase ( 98.4 1E-06 3.5E-11 84.8 11.9 100 208-311 16-128 (323)
160 3rp8_A Flavoprotein monooxygen 98.4 1.4E-07 4.9E-12 94.4 5.7 125 48-175 20-182 (407)
161 2yqu_A 2-oxoglutarate dehydrog 98.4 2.5E-07 8.7E-12 94.1 7.5 99 50-176 166-266 (455)
162 3ihg_A RDME; flavoenzyme, anth 98.4 2.7E-07 9.1E-12 96.0 7.6 38 49-89 3-40 (535)
163 2gmh_A Electron transfer flavo 98.4 6E-07 2.1E-11 94.1 10.2 37 50-89 34-76 (584)
164 1y0p_A Fumarate reductase flav 98.4 4.5E-07 1.6E-11 95.0 9.3 38 49-89 124-161 (571)
165 2qa1_A PGAE, polyketide oxygen 98.4 1.6E-07 5.6E-12 96.6 5.7 121 48-174 8-165 (500)
166 3uox_A Otemo; baeyer-villiger 98.4 8E-07 2.7E-11 92.3 10.6 103 207-310 9-151 (545)
167 4fk1_A Putative thioredoxin re 98.4 1.7E-06 5.7E-11 83.0 12.0 100 208-310 7-119 (304)
168 3hyw_A Sulfide-quinone reducta 98.4 4.4E-07 1.5E-11 91.6 8.2 96 208-309 3-110 (430)
169 1qo8_A Flavocytochrome C3 fuma 98.4 2.5E-07 8.7E-12 96.8 6.7 38 49-89 119-156 (566)
170 2qa2_A CABE, polyketide oxygen 98.4 2.6E-07 9E-12 95.1 6.6 123 48-174 9-166 (499)
171 2xve_A Flavin-containing monoo 98.4 1.8E-06 6.2E-11 88.0 12.5 103 208-311 3-171 (464)
172 3nix_A Flavoprotein/dehydrogen 98.4 1.5E-06 5E-11 87.4 11.7 110 208-320 6-176 (421)
173 1y0p_A Fumarate reductase flav 98.4 2.2E-06 7.7E-11 89.7 13.5 101 207-308 126-317 (571)
174 3d1c_A Flavin-containing putat 98.4 2.4E-06 8.3E-11 84.0 13.0 97 208-309 5-144 (369)
175 2q7v_A Thioredoxin reductase; 98.4 1.6E-06 5.5E-11 83.8 11.4 100 208-310 9-125 (325)
176 3atr_A Conserved archaeal prot 98.4 4.3E-08 1.5E-12 99.8 0.1 123 50-175 5-163 (453)
177 3vrd_B FCCB subunit, flavocyto 98.4 4.6E-07 1.6E-11 90.6 7.4 99 207-311 2-111 (401)
178 3e1t_A Halogenase; flavoprotei 98.4 4.7E-07 1.6E-11 93.6 7.6 124 49-175 5-173 (512)
179 3h8l_A NADH oxidase; membrane 98.4 2.6E-07 8.7E-12 92.7 5.5 98 208-311 2-116 (409)
180 1vdc_A NTR, NADPH dependent th 98.4 1.2E-06 4E-11 85.0 9.7 99 208-311 9-127 (333)
181 1k0i_A P-hydroxybenzoate hydro 98.4 5.9E-07 2E-11 89.5 7.7 120 51-175 2-164 (394)
182 2q0l_A TRXR, thioredoxin reduc 98.3 2E-06 6.9E-11 82.5 11.1 99 209-311 3-117 (311)
183 1xhc_A NADH oxidase /nitrite r 98.3 5.4E-07 1.8E-11 89.0 7.0 99 206-311 7-116 (367)
184 3oz2_A Digeranylgeranylglycero 98.3 4E-06 1.4E-10 83.1 13.4 98 209-308 6-162 (397)
185 2x3n_A Probable FAD-dependent 98.3 3.2E-06 1.1E-10 84.3 12.4 100 208-309 7-167 (399)
186 3h28_A Sulfide-quinone reducta 98.3 3.4E-07 1.2E-11 92.4 5.1 98 208-311 3-112 (430)
187 1hyu_A AHPF, alkyl hydroperoxi 98.3 2.4E-06 8.3E-11 88.3 11.6 103 207-310 212-328 (521)
188 2uzz_A N-methyl-L-tryptophan o 98.3 9.2E-07 3.1E-11 87.2 8.1 45 129-174 158-204 (372)
189 1q1r_A Putidaredoxin reductase 98.3 1.4E-06 4.7E-11 88.0 9.5 102 207-313 4-119 (431)
190 3ef6_A Toluene 1,2-dioxygenase 98.3 2.2E-06 7.4E-11 85.9 10.6 99 208-311 3-114 (410)
191 3da1_A Glycerol-3-phosphate de 98.3 1.7E-06 5.9E-11 90.2 9.8 68 248-318 169-241 (561)
192 4a5l_A Thioredoxin reductase; 98.3 3.4E-06 1.2E-10 81.0 11.1 100 208-311 5-124 (314)
193 2gqw_A Ferredoxin reductase; f 98.3 1.7E-06 5.8E-11 86.7 9.1 97 50-175 144-240 (408)
194 3kkj_A Amine oxidase, flavin-c 98.3 6.5E-07 2.2E-11 83.6 5.5 37 50-89 1-37 (336)
195 1trb_A Thioredoxin reductase; 98.3 3.4E-06 1.1E-10 81.2 10.6 99 208-311 6-119 (320)
196 2a87_A TRXR, TR, thioredoxin r 98.3 2.7E-06 9.2E-11 82.7 9.8 100 207-311 14-129 (335)
197 2v3a_A Rubredoxin reductase; a 98.3 1.6E-06 5.4E-11 86.2 8.1 98 51-175 145-244 (384)
198 2zxi_A TRNA uridine 5-carboxym 98.3 7E-06 2.4E-10 85.4 13.1 100 207-309 27-181 (637)
199 1ryi_A Glycine oxidase; flavop 98.2 3.3E-06 1.1E-10 83.5 10.3 64 250-318 165-228 (382)
200 3lxd_A FAD-dependent pyridine 98.2 2.4E-06 8.3E-11 85.7 9.2 100 207-311 9-122 (415)
201 2gv8_A Monooxygenase; FMO, FAD 98.2 3.7E-06 1.3E-10 85.3 10.6 102 206-310 5-181 (447)
202 1k0i_A P-hydroxybenzoate hydro 98.2 5.1E-06 1.7E-10 82.6 11.2 101 208-310 3-165 (394)
203 3ces_A MNMG, tRNA uridine 5-ca 98.2 7E-06 2.4E-10 85.7 12.5 99 208-309 29-182 (651)
204 3fg2_P Putative rubredoxin red 98.2 2.1E-06 7.2E-11 85.8 8.4 98 208-311 2-113 (404)
205 1yvv_A Amine oxidase, flavin-c 98.2 1E-05 3.4E-10 78.5 13.0 97 208-308 3-162 (336)
206 2r9z_A Glutathione amide reduc 98.2 1.9E-06 6.7E-11 87.7 8.2 99 50-176 165-266 (463)
207 1ges_A Glutathione reductase; 98.2 2.1E-06 7E-11 87.2 8.3 99 50-176 166-267 (450)
208 1lvl_A Dihydrolipoamide dehydr 98.2 1.4E-06 4.8E-11 88.7 6.9 97 50-176 170-270 (458)
209 2vou_A 2,6-dihydroxypyridine h 98.2 4.7E-06 1.6E-10 83.1 10.5 100 207-309 5-154 (397)
210 1nhp_A NADH peroxidase; oxidor 98.2 3E-06 1E-10 86.0 9.1 98 50-175 148-247 (447)
211 3s5w_A L-ornithine 5-monooxyge 98.2 2.8E-06 9.7E-11 86.5 9.0 103 208-311 31-195 (463)
212 1w4x_A Phenylacetone monooxyge 98.2 1.8E-05 6.2E-10 82.2 15.0 99 208-307 17-153 (542)
213 3r9u_A Thioredoxin reductase; 98.2 6.8E-06 2.3E-10 78.7 10.7 99 207-311 4-121 (315)
214 2eq6_A Pyruvate dehydrogenase 98.2 2.3E-06 7.9E-11 87.2 7.5 98 51-176 169-273 (464)
215 3oc4_A Oxidoreductase, pyridin 98.2 3.9E-06 1.3E-10 85.2 9.1 101 208-311 3-118 (452)
216 4eqs_A Coenzyme A disulfide re 98.2 5.3E-06 1.8E-10 83.8 9.8 95 51-175 147-241 (437)
217 2qcu_A Aerobic glycerol-3-phos 98.2 9.4E-06 3.2E-10 83.5 11.9 35 50-87 2-36 (501)
218 4hb9_A Similarities with proba 98.2 2.7E-06 9.2E-11 84.9 7.6 35 52-89 2-36 (412)
219 3cp8_A TRNA uridine 5-carboxym 98.2 1.3E-05 4.4E-10 83.7 12.7 101 206-309 20-175 (641)
220 3kd9_A Coenzyme A disulfide re 98.2 3.4E-06 1.2E-10 85.6 8.2 100 207-311 3-117 (449)
221 1onf_A GR, grase, glutathione 98.2 3.3E-06 1.1E-10 86.9 8.2 98 51-176 176-277 (500)
222 3cty_A Thioredoxin reductase; 98.1 8.6E-06 2.9E-10 78.4 10.6 99 207-310 16-128 (319)
223 3c96_A Flavin-containing monoo 98.1 3.5E-06 1.2E-10 84.4 7.9 38 49-89 2-40 (410)
224 2hqm_A GR, grase, glutathione 98.1 4.4E-06 1.5E-10 85.5 8.7 99 50-176 184-287 (479)
225 3c4n_A Uncharacterized protein 98.1 7.5E-07 2.6E-11 89.2 2.8 35 50-87 35-71 (405)
226 3atr_A Conserved archaeal prot 98.1 1E-05 3.5E-10 82.1 11.3 100 208-309 7-163 (453)
227 3ics_A Coenzyme A-disulfide re 98.1 4.6E-06 1.6E-10 87.7 9.0 103 206-311 35-155 (588)
228 2gmh_A Electron transfer flavo 98.1 1.8E-05 6.1E-10 82.9 13.3 101 208-309 36-218 (584)
229 1ebd_A E3BD, dihydrolipoamide 98.1 2.9E-06 9.9E-11 86.3 6.9 98 50-175 169-271 (455)
230 3iwa_A FAD-dependent pyridine 98.1 6.5E-06 2.2E-10 84.1 9.5 102 207-311 3-128 (472)
231 4gcm_A TRXR, thioredoxin reduc 98.1 1.8E-05 6E-10 76.0 11.8 99 208-311 7-119 (312)
232 2aqj_A Tryptophan halogenase, 98.1 2.6E-06 8.9E-11 88.6 6.2 44 131-175 176-223 (538)
233 2uzz_A N-methyl-L-tryptophan o 98.1 1.8E-05 6.3E-10 77.8 12.0 62 250-316 150-211 (372)
234 2wpf_A Trypanothione reductase 98.1 3.9E-06 1.3E-10 86.2 7.3 99 50-176 190-294 (495)
235 3cgv_A Geranylgeranyl reductas 98.1 1.2E-05 4E-10 79.9 10.6 107 208-318 5-170 (397)
236 1fec_A Trypanothione reductase 98.1 6.2E-06 2.1E-10 84.6 8.7 99 50-176 186-290 (490)
237 1mo9_A ORF3; nucleotide bindin 98.1 6.4E-06 2.2E-10 85.2 8.7 97 52-176 215-318 (523)
238 3jsk_A Cypbp37 protein; octame 98.1 3.5E-06 1.2E-10 81.3 5.9 37 50-89 78-116 (344)
239 3i3l_A Alkylhalidase CMLS; fla 98.1 1.7E-05 5.7E-10 83.1 11.3 108 207-318 23-196 (591)
240 4b1b_A TRXR, thioredoxin reduc 98.0 7.4E-06 2.5E-10 84.7 8.3 98 49-175 221-320 (542)
241 4hb9_A Similarities with proba 98.0 2.1E-05 7.3E-10 78.3 11.5 99 209-309 3-167 (412)
242 1v59_A Dihydrolipoamide dehydr 98.0 6E-06 2E-10 84.5 7.4 98 51-176 183-289 (478)
243 1ojt_A Surface protein; redox- 98.0 4.3E-06 1.5E-10 85.6 6.3 99 50-176 184-288 (482)
244 3e1t_A Halogenase; flavoprotei 98.0 2.5E-05 8.6E-10 80.5 12.1 100 208-309 8-173 (512)
245 1zmd_A Dihydrolipoyl dehydroge 98.0 7.8E-06 2.7E-10 83.5 8.2 99 51-176 178-284 (474)
246 2cdu_A NADPH oxidase; flavoenz 98.0 4.6E-06 1.6E-10 84.7 6.4 100 209-311 2-120 (452)
247 2bc0_A NADH oxidase; flavoprot 98.0 9.8E-06 3.4E-10 83.1 8.8 98 50-175 193-292 (490)
248 4at0_A 3-ketosteroid-delta4-5a 98.0 8.8E-06 3E-10 83.9 8.2 37 50-89 40-76 (510)
249 1xdi_A RV3303C-LPDA; reductase 98.0 9.9E-06 3.4E-10 83.3 8.5 99 50-176 181-281 (499)
250 2a8x_A Dihydrolipoyl dehydroge 98.0 8.1E-06 2.8E-10 83.2 7.7 98 50-175 170-272 (464)
251 2aqj_A Tryptophan halogenase, 98.0 6.2E-05 2.1E-09 78.1 14.6 56 253-310 169-224 (538)
252 3ntd_A FAD-dependent pyridine 98.0 9.2E-06 3.2E-10 84.9 8.2 101 208-311 2-120 (565)
253 3qj4_A Renalase; FAD/NAD(P)-bi 98.0 2.6E-05 8.9E-10 75.9 10.8 95 209-306 3-163 (342)
254 3ihg_A RDME; flavoenzyme, anth 98.0 2.8E-05 9.7E-10 80.6 11.7 99 208-308 6-183 (535)
255 3rp8_A Flavoprotein monooxygen 98.0 3E-05 1E-09 77.4 11.2 100 206-310 22-183 (407)
256 3fmw_A Oxygenase; mithramycin, 98.0 2.2E-05 7.6E-10 81.9 10.3 107 208-319 50-216 (570)
257 2dkh_A 3-hydroxybenzoate hydro 98.0 6.4E-06 2.2E-10 87.4 6.3 37 50-89 31-68 (639)
258 2qae_A Lipoamide, dihydrolipoy 98.0 1.2E-05 4.1E-10 82.0 8.1 98 50-175 173-277 (468)
259 1pj5_A N,N-dimethylglycine oxi 98.0 7E-06 2.4E-10 89.9 6.7 37 50-88 3-39 (830)
260 2gjc_A Thiazole biosynthetic e 98.0 5.4E-05 1.8E-09 72.6 12.0 101 208-309 66-240 (326)
261 3o0h_A Glutathione reductase; 98.0 1.4E-05 4.8E-10 81.8 8.5 98 50-175 190-289 (484)
262 2xdo_A TETX2 protein; tetracyc 97.9 3.9E-05 1.3E-09 76.4 11.3 102 206-310 25-184 (398)
263 3l8k_A Dihydrolipoyl dehydroge 97.9 2.7E-05 9.4E-10 79.3 10.0 98 208-311 5-147 (466)
264 3cgb_A Pyridine nucleotide-dis 97.9 1.8E-05 6.3E-10 80.9 8.7 101 208-311 37-155 (480)
265 1dxl_A Dihydrolipoamide dehydr 97.9 4.8E-05 1.6E-09 77.5 11.8 99 207-311 6-154 (470)
266 4at0_A 3-ketosteroid-delta4-5a 97.9 7.2E-05 2.5E-09 77.0 13.0 58 250-308 203-264 (510)
267 4g6h_A Rotenone-insensitive NA 97.9 1.3E-05 4.6E-10 82.2 7.3 101 207-311 42-172 (502)
268 3jsk_A Cypbp37 protein; octame 97.9 8.2E-05 2.8E-09 71.8 12.2 139 207-346 79-304 (344)
269 2vdc_G Glutamate synthase [NAD 97.9 6.9E-06 2.3E-10 83.3 4.7 90 206-307 121-218 (456)
270 1zk7_A HGII, reductase, mercur 97.9 2.2E-05 7.5E-10 80.0 8.4 96 50-175 175-272 (467)
271 3c4n_A Uncharacterized protein 97.9 1.7E-05 5.9E-10 79.2 7.3 106 208-318 37-246 (405)
272 3ic9_A Dihydrolipoamide dehydr 97.9 2.4E-05 8.1E-10 80.3 8.3 98 50-176 173-276 (492)
273 4dna_A Probable glutathione re 97.9 3E-05 1E-09 78.9 8.6 98 50-176 169-270 (463)
274 2gjc_A Thiazole biosynthetic e 97.9 1.1E-05 3.7E-10 77.5 5.0 38 51-89 65-102 (326)
275 1m6i_A Programmed cell death p 97.8 3E-05 1E-09 79.6 8.5 101 51-175 180-283 (493)
276 3lad_A Dihydrolipoamide dehydr 97.8 3E-05 1E-09 79.1 8.5 99 50-176 179-282 (476)
277 2oln_A NIKD protein; flavoprot 97.8 0.0001 3.6E-09 73.1 12.2 60 253-317 157-216 (397)
278 4gde_A UDP-galactopyranose mut 97.8 8.8E-06 3E-10 83.8 4.4 53 249-306 222-274 (513)
279 1pj5_A N,N-dimethylglycine oxi 97.8 6.2E-05 2.1E-09 82.3 11.1 64 251-318 153-216 (830)
280 3dgh_A TRXR-1, thioredoxin red 97.8 1.7E-05 5.9E-10 81.1 6.3 97 50-175 186-290 (483)
281 3c96_A Flavin-containing monoo 97.8 6.9E-05 2.3E-09 74.9 10.4 99 207-309 4-170 (410)
282 2weu_A Tryptophan 5-halogenase 97.8 0.00013 4.4E-09 75.2 12.5 55 253-309 177-231 (511)
283 3urh_A Dihydrolipoyl dehydroge 97.8 2.9E-05 9.8E-10 79.7 7.5 99 50-176 197-302 (491)
284 2qa2_A CABE, polyketide oxygen 97.8 0.00013 4.5E-09 74.8 12.4 100 206-308 11-166 (499)
285 3dk9_A Grase, GR, glutathione 97.8 3.5E-05 1.2E-09 78.8 7.6 98 51-176 187-295 (478)
286 3dgz_A Thioredoxin reductase 2 97.8 3.3E-05 1.1E-09 79.1 7.4 97 50-175 184-288 (488)
287 1y56_A Hypothetical protein PH 97.8 2.6E-05 8.8E-10 80.0 6.4 101 207-311 108-222 (493)
288 2pyx_A Tryptophan halogenase; 97.8 0.00018 6.2E-09 74.3 12.9 55 253-309 179-234 (526)
289 2qa1_A PGAE, polyketide oxygen 97.7 0.00015 5.1E-09 74.4 11.8 101 205-308 9-165 (500)
290 2gag_A Heterotetrameric sarcos 97.7 0.00015 5.1E-09 80.4 11.6 101 207-310 128-255 (965)
291 3i6d_A Protoporphyrinogen oxid 97.6 2.1E-05 7.1E-10 80.0 3.5 40 264-306 248-287 (470)
292 1gte_A Dihydropyrimidine dehyd 97.6 2.6E-05 9E-10 87.0 4.4 93 207-309 187-289 (1025)
293 2qcu_A Aerobic glycerol-3-phos 97.6 0.00034 1.2E-08 71.8 12.3 60 251-314 151-215 (501)
294 1cjc_A Protein (adrenodoxin re 97.6 2.2E-05 7.7E-10 79.7 3.1 91 206-308 5-106 (460)
295 1c0p_A D-amino acid oxidase; a 97.6 5.2E-05 1.8E-09 74.4 5.6 36 49-87 4-39 (363)
296 1ps9_A 2,4-dienoyl-COA reducta 97.6 9.3E-05 3.2E-09 78.9 8.0 87 207-311 373-470 (671)
297 3qfa_A Thioredoxin reductase 1 97.6 9.7E-05 3.3E-09 76.2 7.8 98 50-176 209-317 (519)
298 2wdq_A Succinate dehydrogenase 97.6 0.00059 2E-08 71.4 13.7 53 254-307 148-205 (588)
299 3nks_A Protoporphyrinogen oxid 97.6 5.1E-05 1.7E-09 77.4 5.2 54 250-306 235-288 (477)
300 3ihm_A Styrene monooxygenase A 97.6 4.7E-05 1.6E-09 76.7 4.8 35 50-87 21-55 (430)
301 2e1m_A L-glutamate oxidase; L- 97.6 7.8E-05 2.7E-09 73.2 6.0 39 48-89 41-80 (376)
302 2e5v_A L-aspartate oxidase; ar 97.5 0.00029 9.8E-09 71.7 10.4 98 209-309 1-177 (472)
303 1rsg_A FMS1 protein; FAD bindi 97.5 4.6E-05 1.6E-09 78.7 4.3 39 49-90 6-45 (516)
304 2b9w_A Putative aminooxidase; 97.5 8.7E-05 3E-09 74.4 6.2 39 49-90 4-43 (424)
305 1lqt_A FPRA; NADP+ derivative, 97.5 2.4E-05 8.2E-10 79.3 2.0 89 207-307 3-107 (456)
306 2bcg_G Secretory pathway GDP d 97.5 9E-05 3.1E-09 75.1 6.1 59 249-309 242-301 (453)
307 3k30_A Histamine dehydrogenase 97.5 0.00011 3.9E-09 78.5 7.2 99 50-175 522-625 (690)
308 2oln_A NIKD protein; flavoprot 97.5 5.5E-05 1.9E-09 75.1 4.5 35 51-88 4-38 (397)
309 2yg5_A Putrescine oxidase; oxi 97.5 5.3E-05 1.8E-09 76.7 4.2 38 50-90 4-41 (453)
310 2x8g_A Thioredoxin glutathione 97.5 0.00018 6E-09 75.7 7.7 96 51-175 286-396 (598)
311 1v0j_A UDP-galactopyranose mut 97.5 0.00011 3.8E-09 73.1 5.8 38 50-90 6-44 (399)
312 2jae_A L-amino acid oxidase; o 97.4 0.00012 4.2E-09 74.9 6.0 39 49-90 9-47 (489)
313 2ivd_A PPO, PPOX, protoporphyr 97.4 9.2E-05 3.2E-09 75.5 5.0 40 48-90 13-52 (478)
314 3hdq_A UDP-galactopyranose mut 97.4 0.00012 4.2E-09 72.4 5.6 39 49-90 27-65 (397)
315 3lov_A Protoporphyrinogen oxid 97.4 0.00011 3.6E-09 75.0 5.3 41 49-90 2-42 (475)
316 1kf6_A Fumarate reductase flav 97.4 0.00077 2.6E-08 70.7 11.8 97 208-306 6-195 (602)
317 2dkh_A 3-hydroxybenzoate hydro 97.3 0.00066 2.2E-08 71.9 10.1 100 208-308 33-211 (639)
318 1o94_A Tmadh, trimethylamine d 97.3 0.0001 3.6E-09 79.2 3.8 88 207-309 389-492 (729)
319 3c4a_A Probable tryptophan hyd 97.3 0.00019 6.4E-09 70.9 5.0 35 52-89 1-37 (381)
320 3g3e_A D-amino-acid oxidase; F 97.3 0.00014 4.7E-09 70.9 4.0 36 52-87 1-39 (351)
321 2pyx_A Tryptophan halogenase; 97.3 0.00018 6E-09 74.4 4.9 44 131-175 186-234 (526)
322 3c4a_A Probable tryptophan hyd 97.3 0.00013 4.3E-09 72.2 3.6 87 209-309 2-144 (381)
323 4dsg_A UDP-galactopyranose mut 97.3 0.00025 8.4E-09 72.5 5.8 40 49-90 7-46 (484)
324 2bi7_A UDP-galactopyranose mut 97.3 0.00021 7.1E-09 70.7 5.1 38 50-90 2-39 (384)
325 2vvm_A Monoamine oxidase N; FA 97.2 0.00024 8.3E-09 72.7 5.6 56 249-307 255-311 (495)
326 2r0c_A REBC; flavin adenine di 97.2 0.00019 6.3E-09 74.7 4.7 36 51-89 26-61 (549)
327 1chu_A Protein (L-aspartate ox 97.2 0.00073 2.5E-08 69.9 9.2 32 208-240 9-40 (540)
328 1sez_A Protoporphyrinogen oxid 97.2 0.00023 7.9E-09 73.0 5.1 38 50-90 12-49 (504)
329 2weu_A Tryptophan 5-halogenase 97.2 0.00019 6.6E-09 73.9 4.3 44 131-175 184-231 (511)
330 1i8t_A UDP-galactopyranose mut 97.2 0.00023 8E-09 69.9 4.5 36 52-90 2-37 (367)
331 2iid_A L-amino-acid oxidase; f 97.2 0.0003 1E-08 72.1 5.5 39 49-90 31-69 (498)
332 2rgh_A Alpha-glycerophosphate 97.2 0.0028 9.6E-08 66.0 12.9 53 255-309 194-251 (571)
333 2h88_A Succinate dehydrogenase 97.2 0.002 6.9E-08 67.6 11.6 53 254-308 160-217 (621)
334 3g5s_A Methylenetetrahydrofola 97.1 0.00039 1.3E-08 67.8 5.4 35 51-88 1-35 (443)
335 2r0c_A REBC; flavin adenine di 97.1 0.0027 9.3E-08 65.8 12.0 95 208-308 27-196 (549)
336 2bs2_A Quinol-fumarate reducta 97.1 0.00028 9.5E-09 74.7 4.2 36 50-88 4-39 (660)
337 2bs2_A Quinol-fumarate reducta 97.0 0.0039 1.3E-07 65.9 12.3 51 255-307 164-219 (660)
338 2wdq_A Succinate dehydrogenase 97.0 0.00033 1.1E-08 73.3 4.1 36 50-88 6-41 (588)
339 1d5t_A Guanine nucleotide diss 97.0 0.00067 2.3E-08 68.2 6.0 58 249-309 234-291 (433)
340 1pn0_A Phenol 2-monooxygenase; 97.0 0.00037 1.3E-08 74.0 4.1 36 50-88 7-47 (665)
341 4gde_A UDP-galactopyranose mut 97.0 0.00092 3.1E-08 68.6 6.8 32 208-239 11-43 (513)
342 2h88_A Succinate dehydrogenase 96.9 0.00047 1.6E-08 72.4 4.3 35 50-87 17-51 (621)
343 3p1w_A Rabgdi protein; GDI RAB 96.9 0.00066 2.3E-08 68.6 5.2 58 249-307 256-313 (475)
344 2rgh_A Alpha-glycerophosphate 96.9 0.00062 2.1E-08 71.0 5.2 35 50-87 31-65 (571)
345 3gyx_A Adenylylsulfate reducta 96.9 0.00063 2.2E-08 71.9 4.8 36 50-88 21-62 (662)
346 4gut_A Lysine-specific histone 96.9 0.00074 2.5E-08 72.7 5.4 39 48-89 333-371 (776)
347 1jnr_A Adenylylsulfate reducta 96.8 0.00085 2.9E-08 71.0 4.7 36 50-88 21-60 (643)
348 2z3y_A Lysine-specific histone 96.8 0.0012 4.1E-08 70.1 5.9 39 49-90 105-143 (662)
349 3i6d_A Protoporphyrinogen oxid 96.7 0.0082 2.8E-07 60.5 11.6 36 207-242 5-46 (470)
350 1jnr_A Adenylylsulfate reducta 96.7 0.0076 2.6E-07 63.7 11.6 51 257-308 159-218 (643)
351 2xag_A Lysine-specific histone 96.7 0.0016 5.3E-08 70.8 6.2 39 49-90 276-314 (852)
352 1pn0_A Phenol 2-monooxygenase; 96.7 0.007 2.4E-07 64.2 10.7 32 208-239 9-45 (665)
353 4gut_A Lysine-specific histone 96.6 0.0099 3.4E-07 64.0 11.6 42 262-306 542-583 (776)
354 1b37_A Protein (polyamine oxid 96.6 0.0018 6.3E-08 65.7 5.4 54 250-306 207-268 (472)
355 1kdg_A CDH, cellobiose dehydro 96.5 0.0017 5.9E-08 67.3 5.0 64 254-319 201-272 (546)
356 1ju2_A HydroxynitrIle lyase; f 96.4 0.0012 4.2E-08 68.2 3.0 59 259-318 204-271 (536)
357 3q9t_A Choline dehydrogenase a 96.4 0.002 6.7E-08 67.1 4.3 38 49-88 4-41 (577)
358 3t37_A Probable dehydrogenase; 96.3 0.002 6.8E-08 66.4 4.0 58 260-319 222-282 (526)
359 4b63_A L-ornithine N5 monooxyg 96.3 0.017 5.8E-07 59.0 10.9 61 250-311 146-217 (501)
360 3ayj_A Pro-enzyme of L-phenyla 96.3 0.0017 5.9E-08 68.7 3.3 40 50-89 55-100 (721)
361 3kkj_A Amine oxidase, flavin-c 96.3 0.0037 1.3E-07 57.5 5.2 34 209-242 4-37 (336)
362 3gyx_A Adenylylsulfate reducta 96.3 0.0075 2.6E-07 63.7 8.0 52 255-307 172-232 (662)
363 3qvp_A Glucose oxidase; oxidor 96.1 0.0032 1.1E-07 65.5 4.2 65 253-318 231-303 (583)
364 1n4w_A CHOD, cholesterol oxida 96.0 0.005 1.7E-07 63.1 4.9 58 259-317 231-297 (504)
365 1coy_A Cholesterol oxidase; ox 95.8 0.0075 2.6E-07 61.8 5.4 62 255-317 233-302 (507)
366 3p1w_A Rabgdi protein; GDI RAB 95.8 0.016 5.4E-07 58.5 7.3 40 49-91 18-57 (475)
367 3lk7_A UDP-N-acetylmuramoylala 95.8 0.0075 2.6E-07 60.8 4.9 82 206-313 8-89 (451)
368 1gpe_A Protein (glucose oxidas 95.7 0.0078 2.7E-07 62.8 4.9 63 255-318 237-307 (587)
369 4dgk_A Phytoene dehydrogenase; 95.6 0.0083 2.8E-07 61.2 4.5 35 208-242 2-36 (501)
370 2jbv_A Choline oxidase; alcoho 95.5 0.0084 2.9E-07 62.0 4.3 64 254-318 214-283 (546)
371 3eag_A UDP-N-acetylmuramate:L- 95.5 0.012 4.2E-07 56.5 5.1 81 206-314 3-84 (326)
372 3fim_B ARYL-alcohol oxidase; A 95.4 0.0061 2.1E-07 63.2 2.7 65 253-318 212-286 (566)
373 3fwz_A Inner membrane protein 95.2 0.024 8.1E-07 46.9 5.2 37 48-87 4-40 (140)
374 2g1u_A Hypothetical protein TM 95.0 0.026 9.1E-07 47.5 5.1 37 48-87 16-52 (155)
375 3dfz_A SIRC, precorrin-2 dehyd 94.9 0.017 5.8E-07 51.9 3.9 107 206-345 30-141 (223)
376 3eag_A UDP-N-acetylmuramate:L- 94.8 0.059 2E-06 51.6 7.7 35 50-87 3-38 (326)
377 1id1_A Putative potassium chan 94.7 0.04 1.4E-06 46.2 5.5 34 50-86 2-35 (153)
378 2iid_A L-amino-acid oxidase; f 94.5 0.04 1.4E-06 56.1 5.9 39 206-244 32-70 (498)
379 3nrn_A Uncharacterized protein 94.4 0.038 1.3E-06 54.9 5.3 35 208-242 1-35 (421)
380 3llv_A Exopolyphosphatase-rela 94.2 0.044 1.5E-06 45.2 4.6 35 50-87 5-39 (141)
381 3ka7_A Oxidoreductase; structu 94.2 0.043 1.5E-06 54.5 5.1 34 209-242 2-35 (425)
382 3dme_A Conserved exported prot 93.9 0.053 1.8E-06 52.4 5.2 33 208-240 5-37 (369)
383 3k7m_X 6-hydroxy-L-nicotine ox 93.9 0.05 1.7E-06 54.1 5.1 34 209-242 3-36 (431)
384 2b9w_A Putative aminooxidase; 93.7 0.065 2.2E-06 53.2 5.6 37 206-242 5-42 (424)
385 3ihm_A Styrene monooxygenase A 93.7 0.047 1.6E-06 54.5 4.5 34 207-240 22-55 (430)
386 3nks_A Protoporphyrinogen oxid 93.7 0.054 1.8E-06 54.7 5.0 35 208-242 3-39 (477)
387 1lss_A TRK system potassium up 93.6 0.077 2.6E-06 43.3 4.8 33 52-87 5-37 (140)
388 2e1m_A L-glutamate oxidase; L- 93.5 0.073 2.5E-06 52.0 5.4 37 206-242 43-80 (376)
389 1vg0_A RAB proteins geranylger 93.5 0.082 2.8E-06 55.2 6.0 61 248-309 377-438 (650)
390 1s3e_A Amine oxidase [flavin-c 93.5 0.068 2.3E-06 54.8 5.3 61 207-268 4-81 (520)
391 3fwz_A Inner membrane protein 93.5 0.2 6.9E-06 41.1 7.3 77 207-308 7-83 (140)
392 2jae_A L-amino acid oxidase; o 93.4 0.075 2.6E-06 53.9 5.5 38 205-242 9-46 (489)
393 3ic5_A Putative saccharopine d 93.4 0.072 2.5E-06 42.0 4.3 35 51-87 5-39 (118)
394 1rsg_A FMS1 protein; FAD bindi 93.4 0.067 2.3E-06 54.7 5.1 35 207-241 8-43 (516)
395 2gf3_A MSOX, monomeric sarcosi 93.3 0.073 2.5E-06 52.0 5.1 33 208-240 4-36 (389)
396 3i83_A 2-dehydropantoate 2-red 93.3 0.45 1.5E-05 45.2 10.5 86 208-316 3-91 (320)
397 4hv4_A UDP-N-acetylmuramate--L 93.3 0.057 1.9E-06 55.0 4.2 78 205-313 20-98 (494)
398 1y56_B Sarcosine oxidase; dehy 93.3 0.077 2.6E-06 51.7 5.1 34 207-240 5-38 (382)
399 3g5s_A Methylenetetrahydrofola 93.2 0.088 3E-06 51.4 5.2 33 208-240 2-34 (443)
400 1c0p_A D-amino acid oxidase; a 93.2 0.084 2.9E-06 51.2 5.2 33 207-239 6-38 (363)
401 3nyc_A D-arginine dehydrogenas 93.2 0.078 2.7E-06 51.5 5.0 36 206-242 8-43 (381)
402 2x5o_A UDP-N-acetylmuramoylala 93.1 0.032 1.1E-06 55.9 2.1 79 206-314 4-82 (439)
403 3dfz_A SIRC, precorrin-2 dehyd 93.1 0.1 3.4E-06 46.8 5.1 37 48-87 28-64 (223)
404 2ivd_A PPO, PPOX, protoporphyr 93.1 0.085 2.9E-06 53.3 5.2 37 205-241 14-50 (478)
405 3c85_A Putative glutathione-re 92.7 0.12 3.9E-06 44.8 4.8 36 49-87 37-73 (183)
406 1sez_A Protoporphyrinogen oxid 92.7 0.11 3.6E-06 52.9 5.3 37 206-242 12-48 (504)
407 3llv_A Exopolyphosphatase-rela 92.6 0.31 1.1E-05 39.9 7.2 33 207-239 6-38 (141)
408 2g1u_A Hypothetical protein TM 92.5 0.18 6.2E-06 42.2 5.8 37 205-241 17-53 (155)
409 2bi7_A UDP-galactopyranose mut 92.4 0.11 3.9E-06 50.8 5.0 35 208-242 4-38 (384)
410 2yg5_A Putrescine oxidase; oxi 92.4 0.12 4E-06 51.8 5.2 35 208-242 6-40 (453)
411 3dje_A Fructosyl amine: oxygen 92.2 0.12 4.2E-06 51.4 5.1 35 207-241 6-41 (438)
412 2gag_B Heterotetrameric sarcos 92.2 0.1 3.6E-06 51.2 4.4 33 208-240 22-56 (405)
413 3hdq_A UDP-galactopyranose mut 92.2 0.14 4.7E-06 50.4 5.2 36 207-242 29-64 (397)
414 2bcg_G Secretory pathway GDP d 92.2 0.2 6.8E-06 50.3 6.5 38 50-90 10-47 (453)
415 1v0j_A UDP-galactopyranose mut 92.1 0.12 4.2E-06 50.9 4.8 36 207-242 7-43 (399)
416 2vvm_A Monoamine oxidase N; FA 92.1 0.29 1E-05 49.5 7.7 37 51-90 39-75 (495)
417 2hmt_A YUAA protein; RCK, KTN, 92.1 0.15 5.1E-06 41.7 4.6 34 51-87 6-39 (144)
418 1vg0_A RAB proteins geranylger 92.0 0.37 1.3E-05 50.3 8.4 39 49-90 6-44 (650)
419 3pvc_A TRNA 5-methylaminomethy 91.9 0.15 5.1E-06 54.2 5.5 34 208-241 265-298 (689)
420 3ps9_A TRNA 5-methylaminomethy 91.8 0.16 5.3E-06 53.9 5.4 33 208-240 273-305 (676)
421 1i8t_A UDP-galactopyranose mut 91.6 0.16 5.3E-06 49.5 4.9 34 209-242 3-36 (367)
422 3ego_A Probable 2-dehydropanto 91.6 0.43 1.5E-05 45.1 7.8 75 208-306 3-77 (307)
423 3g3e_A D-amino-acid oxidase; F 91.6 0.11 3.8E-06 50.0 3.7 32 209-240 2-39 (351)
424 1f0y_A HCDH, L-3-hydroxyacyl-C 91.5 0.21 7.2E-06 47.1 5.5 37 48-87 12-48 (302)
425 1kyq_A Met8P, siroheme biosynt 91.4 0.1 3.4E-06 48.4 3.0 37 49-88 11-47 (274)
426 3hn2_A 2-dehydropantoate 2-red 91.4 0.3 1E-05 46.3 6.4 85 208-315 3-88 (312)
427 3fpz_A Thiazole biosynthetic e 91.3 0.16 5.3E-06 48.5 4.5 66 207-273 65-139 (326)
428 3lov_A Protoporphyrinogen oxid 91.3 0.15 5E-06 51.5 4.4 34 208-241 5-40 (475)
429 2x5o_A UDP-N-acetylmuramoylala 91.3 0.16 5.4E-06 50.8 4.6 36 50-88 4-39 (439)
430 3hn7_A UDP-N-acetylmuramate-L- 91.2 0.2 6.9E-06 51.3 5.4 80 205-313 17-97 (524)
431 4ffl_A PYLC; amino acid, biosy 91.2 0.22 7.6E-06 48.2 5.5 37 51-90 1-37 (363)
432 2e4g_A Tryptophan halogenase; 91.0 0.2 6.9E-06 51.6 5.3 35 206-240 24-61 (550)
433 1vl6_A Malate oxidoreductase; 90.9 0.22 7.5E-06 48.2 4.9 40 48-89 189-228 (388)
434 2a9f_A Putative malic enzyme ( 90.8 0.23 7.8E-06 48.2 4.9 38 48-87 185-222 (398)
435 1id1_A Putative potassium chan 90.8 0.31 1.1E-05 40.6 5.3 33 207-239 3-35 (153)
436 2ew2_A 2-dehydropantoate 2-red 90.7 0.27 9.2E-06 46.4 5.5 32 208-239 4-35 (316)
437 2z3y_A Lysine-specific histone 90.7 0.23 7.8E-06 52.5 5.4 36 206-241 106-141 (662)
438 3hwr_A 2-dehydropantoate 2-red 90.7 0.4 1.4E-05 45.5 6.7 33 206-239 18-50 (318)
439 3da1_A Glycerol-3-phosphate de 90.7 0.29 9.9E-06 50.6 6.1 35 206-240 17-51 (561)
440 2xag_A Lysine-specific histone 90.7 0.24 8.1E-06 53.8 5.5 35 207-241 278-312 (852)
441 3ado_A Lambda-crystallin; L-gu 90.7 0.38 1.3E-05 45.6 6.3 39 206-244 5-43 (319)
442 3l4b_C TRKA K+ channel protien 90.6 0.2 6.9E-06 44.6 4.2 32 53-87 2-33 (218)
443 1d5t_A Guanine nucleotide diss 90.5 0.16 5.5E-06 50.6 3.8 38 50-90 5-42 (433)
444 3lk7_A UDP-N-acetylmuramoylala 90.4 0.25 8.7E-06 49.5 5.1 133 50-235 8-143 (451)
445 4hv4_A UDP-N-acetylmuramate--L 90.1 0.27 9.1E-06 50.0 5.1 127 49-233 20-151 (494)
446 4dsg_A UDP-galactopyranose mut 90.0 0.32 1.1E-05 49.3 5.6 37 206-242 8-45 (484)
447 1lss_A TRK system potassium up 89.9 0.37 1.2E-05 39.1 5.0 33 207-239 4-36 (140)
448 3axb_A Putative oxidoreductase 89.9 0.17 5.7E-06 50.6 3.3 31 208-238 24-55 (448)
449 1jw9_B Molybdopterin biosynthe 89.7 0.32 1.1E-05 44.4 4.8 37 50-88 30-66 (249)
450 3ic5_A Putative saccharopine d 89.5 0.32 1.1E-05 38.0 4.2 33 207-239 5-38 (118)
451 1d4d_A Flavocytochrome C fumar 89.5 0.38 1.3E-05 49.8 5.8 36 207-242 126-161 (572)
452 3ghy_A Ketopantoate reductase 89.4 0.56 1.9E-05 44.8 6.5 77 208-307 4-81 (335)
453 2hmt_A YUAA protein; RCK, KTN, 89.2 0.42 1.4E-05 38.9 4.8 33 207-239 6-38 (144)
454 4dio_A NAD(P) transhydrogenase 89.1 0.43 1.5E-05 46.7 5.4 35 51-88 190-224 (405)
455 3tl2_A Malate dehydrogenase; c 89.0 0.46 1.6E-05 45.0 5.4 37 48-86 5-41 (315)
456 4e12_A Diketoreductase; oxidor 88.9 0.46 1.6E-05 44.2 5.4 35 50-87 3-37 (283)
457 1y6j_A L-lactate dehydrogenase 88.9 0.44 1.5E-05 45.3 5.3 37 50-87 6-42 (318)
458 3k96_A Glycerol-3-phosphate de 88.7 0.37 1.3E-05 46.6 4.6 38 47-87 25-62 (356)
459 3gvi_A Malate dehydrogenase; N 88.6 0.51 1.7E-05 44.9 5.4 38 48-87 4-41 (324)
460 3pqe_A L-LDH, L-lactate dehydr 88.4 0.53 1.8E-05 44.8 5.4 36 50-86 4-39 (326)
461 1kyq_A Met8P, siroheme biosynt 88.3 0.33 1.1E-05 44.9 3.8 34 206-239 12-45 (274)
462 4e12_A Diketoreductase; oxidor 88.1 0.7 2.4E-05 43.0 6.1 38 207-244 4-41 (283)
463 1b37_A Protein (polyamine oxid 88.0 0.48 1.7E-05 47.6 5.3 36 207-242 4-40 (472)
464 3p2y_A Alanine dehydrogenase/p 88.0 0.46 1.6E-05 46.1 4.7 35 50-87 183-217 (381)
465 3fi9_A Malate dehydrogenase; s 87.9 0.64 2.2E-05 44.6 5.7 37 49-86 6-43 (343)
466 3i83_A 2-dehydropantoate 2-red 87.5 0.56 1.9E-05 44.5 5.1 33 52-87 3-35 (320)
467 1zud_1 Adenylyltransferase THI 87.5 0.54 1.9E-05 42.9 4.7 37 50-88 27-63 (251)
468 3d0o_A L-LDH 1, L-lactate dehy 87.4 0.63 2.2E-05 44.1 5.3 37 49-86 4-40 (317)
469 3rui_A Ubiquitin-like modifier 87.4 0.63 2.1E-05 44.4 5.2 37 50-88 33-69 (340)
470 3ghy_A Ketopantoate reductase 87.0 0.66 2.3E-05 44.3 5.3 33 51-86 3-35 (335)
471 1pzg_A LDH, lactate dehydrogen 87.0 0.77 2.6E-05 43.8 5.7 35 51-87 9-43 (331)
472 1pjq_A CYSG, siroheme synthase 86.9 0.5 1.7E-05 47.4 4.5 36 49-87 10-45 (457)
473 3gpi_A NAD-dependent epimerase 86.9 0.72 2.4E-05 42.7 5.4 35 50-87 2-36 (286)
474 3l4b_C TRKA K+ channel protien 86.9 1.2 4E-05 39.5 6.6 32 209-240 2-33 (218)
475 3c85_A Putative glutathione-re 86.9 0.61 2.1E-05 40.0 4.6 34 207-240 39-73 (183)
476 2raf_A Putative dinucleotide-b 86.8 0.76 2.6E-05 40.6 5.2 36 50-88 18-53 (209)
477 3h8v_A Ubiquitin-like modifier 86.8 0.57 2E-05 43.7 4.5 37 50-88 35-71 (292)
478 3p7m_A Malate dehydrogenase; p 86.7 0.8 2.7E-05 43.5 5.6 37 49-87 3-39 (321)
479 3pl8_A Pyranose 2-oxidase; sub 86.6 0.6 2E-05 48.9 5.1 36 207-242 46-81 (623)
480 1ldn_A L-lactate dehydrogenase 86.6 0.82 2.8E-05 43.3 5.6 36 50-86 5-40 (316)
481 2ew2_A 2-dehydropantoate 2-red 86.3 0.69 2.3E-05 43.5 5.0 32 52-86 4-35 (316)
482 3hn2_A 2-dehydropantoate 2-red 86.3 0.63 2.2E-05 44.0 4.7 32 52-86 3-34 (312)
483 1x13_A NAD(P) transhydrogenase 86.1 0.71 2.4E-05 45.4 5.1 34 51-87 172-205 (401)
484 1lld_A L-lactate dehydrogenase 86.1 0.79 2.7E-05 43.4 5.3 36 51-87 7-42 (319)
485 4g65_A TRK system potassium up 86.1 0.25 8.5E-06 49.7 1.7 110 186-319 210-327 (461)
486 4huj_A Uncharacterized protein 86.0 0.58 2E-05 41.7 4.0 36 49-87 21-57 (220)
487 3ado_A Lambda-crystallin; L-gu 85.9 0.68 2.3E-05 43.8 4.6 35 50-87 5-39 (319)
488 3vku_A L-LDH, L-lactate dehydr 85.8 0.89 3.1E-05 43.2 5.4 37 49-86 7-43 (326)
489 3l9w_A Glutathione-regulated p 85.8 0.65 2.2E-05 45.8 4.6 35 51-88 4-38 (413)
490 2dpo_A L-gulonate 3-dehydrogen 85.7 0.69 2.4E-05 43.9 4.6 36 49-87 4-39 (319)
491 3q2o_A Phosphoribosylaminoimid 85.7 1.2 4.1E-05 43.4 6.5 39 49-90 12-50 (389)
492 1l7d_A Nicotinamide nucleotide 85.5 0.91 3.1E-05 44.3 5.5 35 50-87 171-205 (384)
493 2i6t_A Ubiquitin-conjugating e 85.4 0.86 3E-05 42.9 5.0 36 51-87 14-49 (303)
494 2v6b_A L-LDH, L-lactate dehydr 85.3 0.9 3.1E-05 42.8 5.2 34 53-87 2-35 (304)
495 3ayj_A Pro-enzyme of L-phenyla 85.2 0.4 1.4E-05 50.7 2.9 38 207-244 56-102 (721)
496 1bg6_A N-(1-D-carboxylethyl)-L 85.2 0.85 2.9E-05 43.8 5.1 33 51-86 4-36 (359)
497 3nv9_A Malic enzyme; rossmann 85.2 0.76 2.6E-05 45.2 4.6 41 49-89 217-257 (487)
498 3doj_A AT3G25530, dehydrogenas 85.1 0.96 3.3E-05 42.7 5.3 36 49-87 19-54 (310)
499 2dpo_A L-gulonate 3-dehydrogen 84.9 1.3 4.5E-05 41.9 6.1 38 207-244 6-43 (319)
500 3k6j_A Protein F01G10.3, confi 84.8 1.4 4.7E-05 44.0 6.4 37 49-88 52-88 (460)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.8e-59 Score=473.59 Aligned_cols=396 Identities=29% Similarity=0.506 Sum_probs=351.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChh
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (489)
++++||||||||+||++||.+|++.|+ +.+|+|||++++.+|++|++++.++.... ....+ .....+
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~~~~~~-~~~~~-----------~~~~~~ 73 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGF-EGRVLVIGREPEIPYERPPLSKEYLAREK-TFERI-----------CIRPAQ 73 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC-CSCEEEEESSSSCCBCSGGGGTTTTTTSS-CSGGG-----------BSSCHH
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCc-CCCEEEEecCCCCCcCcccCCHHHHcCCC-CHHHh-----------ccCCHH
Confidence 356899999999999999999999997 67899999999999999999876654321 11111 245678
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcC-C
Q 011267 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK-A 207 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~-~ 207 (489)
++.+.+++++.+++|+.+|++.+.+.+.+|..+.||+||+|||+.|. .|..+|.+.++++++++..++..+...+.. +
T Consensus 74 ~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~-~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~ 152 (415)
T 3lxd_A 74 FWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPR-RLSCVGADLAGVHAVRTKEDADRLMAELDAGA 152 (415)
T ss_dssp HHHHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECC-CCBTTSSCCBTEECCCSHHHHHHHHHHHHTTC
T ss_pred HHHHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccC-CCCCCCccccCEEEEcCHHHHHHHHHHhhhcC
Confidence 89999999999999999999999999999999999999999999987 455677777889999999999998887777 9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAV 287 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v 287 (489)
++++|||+|++|+|+|..+.+.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++ ++.|+++.. +++++..|
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~-~~~v~~i~~-~~~~v~~v 230 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRT-GAAMDCIEG-DGTKVTGV 230 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE-TCCEEEEEE-SSSBEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEE-CCEEEEEEe-cCCcEEEE
Confidence 9999999999999999999999999999999999999889999999999999999999999 999999985 35677789
Q ss_pred EeCCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccC-CcccccccHHHHHH
Q 011267 288 KLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY-DRTARVEHVDHARQ 366 (489)
Q Consensus 288 ~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~-~~~~~~~~~~~A~~ 366 (489)
++++|++++||.||+|+|.+|++++++.+|++.+ ++|.||+++||+.|+|||+|||+..+.... |...++++|..|..
T Consensus 231 ~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~ 309 (415)
T 3lxd_A 231 RMQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NGVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNAND 309 (415)
T ss_dssp EESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SSEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHH
T ss_pred EeCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CCEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHH
Confidence 9999999999999999999999999999999987 569999999999999999999999887666 77788999999999
Q ss_pred HHHHHHHHHhcCCCCCCCcCCceeeecccccCCCcceeeeeecCCcC--cEEEEccCC-CcEEEEEEECCEEEEEEeccC
Q 011267 367 SAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESG 443 (489)
Q Consensus 367 ~g~~~a~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~ 443 (489)
||+.+|+||++. ..+|..+||||+++|+.. ++++|...+ +.+..++.+ ..|.++|+++|+|+|+++ +|
T Consensus 310 qg~~aa~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 380 (415)
T 3lxd_A 310 MATAAAKDICGA-PVPYKATPWFWSNQYDLK-------LQTVGLSTGHDNAVLRGDPATRSFSVVYLKGGKVVALDC-VN 380 (415)
T ss_dssp HHHHHHHHHTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCSEEEEEEEGGGTEEEEEEEETTEEEEEEE-ES
T ss_pred HHHHHHHHhcCC-CCCCCCCCeeEeeeCCcE-------EEEEeCCCCCCEEEEEecCCCCeEEEEEEECCEEEEEEE-EC
Confidence 999999999964 467999999999999865 889997653 556667664 679999999999999996 89
Q ss_pred CHHHhHHHHHHHhcCCCCChhhhcCCC
Q 011267 444 SPEEFQLLPTLARSQPFVDKAKLQQAS 470 (489)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (489)
++.++..+++|+.++..++++.|.++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~l~~~~ 407 (415)
T 3lxd_A 381 MVKDYVQGKKLVEARAQIAPEQLADAG 407 (415)
T ss_dssp CHHHHHHHHHHHHHTCCCCHHHHTCTT
T ss_pred ChHHHHHHHHHHHCCCCCCHHHhcCCC
Confidence 999999999999999999988887664
No 2
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.4e-58 Score=468.33 Aligned_cols=394 Identities=29% Similarity=0.476 Sum_probs=350.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
++||||||||+||++||.+|++.|+ +.+|+|||++++.+|++|++++.++.... ....+ .....+++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~l~~~~-~~~~~-----------~~~~~~~~ 67 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKY-PGRIALINDEKHLPYQRPPLSKAYLKSGG-DPNSL-----------MFRPEKFF 67 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CSCEEEECCSSSSSBCSGGGGTGGGGSCC-CTTSS-----------BSSCHHHH
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCc-CCCEEEEeCCCCCCCCCccCCHHHHCCCC-CHHHc-----------cCCCHHHH
Confidence 3689999999999999999999997 67899999999999999999976664322 12222 24567889
Q ss_pred HHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcE
Q 011267 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 210 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~v 210 (489)
.+.+++++. ++|+.++++.+.+.+.+|.++.||+||+|||+.|. .|..+|.+.++++++++..++..+...+..++++
T Consensus 68 ~~~~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~-~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~v 145 (404)
T 3fg2_P 68 QDQAIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNR-MLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHV 145 (404)
T ss_dssp HHTTEEEEC-CCEEEEETTTTEEEESSSCEEECSEEEECCCEEEC-CCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEE
T ss_pred HhCCCEEEE-EEEEEEECCCCEEEECCCCEEECCEEEEeeCCCcc-CCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeE
Confidence 999999999 89999999999999999999999999999999886 4556777778999999999999998888889999
Q ss_pred EEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC
Q 011267 211 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE 290 (489)
Q Consensus 211 vViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~ 290 (489)
+|||+|++|+|+|..+.+.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++ ++.|+++..+ ++++..|+++
T Consensus 146 vViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~-~~~v~~i~~~-~~~v~~V~~~ 223 (404)
T 3fg2_P 146 VVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHY-GVRATEIAAE-GDRVTGVVLS 223 (404)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEEC-SCCEEEEEEE-TTEEEEEEET
T ss_pred EEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEE-CCEEEEEEec-CCcEEEEEeC
Confidence 9999999999999999999999999999999999889999999999999999999999 9999999853 4677789999
Q ss_pred CCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHH
Q 011267 291 DGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQH 370 (489)
Q Consensus 291 ~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~ 370 (489)
+|++++||.||+|+|.+|++++++.+|++.+ ++|.||+++||+.|+|||+|||+..+....|...+.++|..|..||+.
T Consensus 224 dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~Gi~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~ 302 (404)
T 3fg2_P 224 DGNTLPCDLVVVGVGVIPNVEIAAAAGLPTA-AGIIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARC 302 (404)
T ss_dssp TSCEEECSEEEECCCEEECCHHHHHTTCCBS-SSEEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHH
T ss_pred CCCEEEcCEEEECcCCccCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHH
Confidence 9999999999999999999999999999988 459999999999999999999999887777877889999999999999
Q ss_pred HHHHHhcCCCCCCCcCCceeeecccccCCCcceeeeeecCCcC--cEEEEccCC-CcEEEEEEECCEEEEEEeccCCHHH
Q 011267 371 CIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEE 447 (489)
Q Consensus 371 ~a~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~ 447 (489)
+|+||++. ..+|..+||||+++|+.. ++++|...+ +.+..++.+ .+|.++|+++|+|+|+++ +|++.+
T Consensus 303 aa~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~ 373 (404)
T 3fg2_P 303 VAARLTGD-AKPYDGYPWFWSDQGDDK-------LQIVGLTAGFDQVVIRGSVAERSFSAFCYKAGKLIGIES-VNRAAD 373 (404)
T ss_dssp HHHHTTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCCEEEEEEETTTTEEEEEEEETTEEEEEEE-ESCHHH
T ss_pred HHHHhCCC-CCCCCCCCceEeEECCcE-------EEEEeCCCCCCEEEEEecCCCCcEEEEEEECCEEEEEEE-eCCHHH
Confidence 99999964 467999999999999865 889997643 566677664 679999999999999996 899999
Q ss_pred hHHHHHHHhcCCCCChhhhcCCCc
Q 011267 448 FQLLPTLARSQPFVDKAKLQQASS 471 (489)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~ 471 (489)
+..+++|+.++..++++.|.++..
T Consensus 374 ~~~~~~~~~~~~~~~~~~l~~~~~ 397 (404)
T 3fg2_P 374 HVFGRKILPLDKSVTPEQAADLSF 397 (404)
T ss_dssp HHHHHHHTTTTCCCCHHHHHCTTS
T ss_pred HHHHHHHHHcCCCCCHHHhcCCCC
Confidence 999999999999999988877653
No 3
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1.4e-58 Score=468.96 Aligned_cols=391 Identities=27% Similarity=0.447 Sum_probs=345.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
+++|||||||+||++||.+|++.|+ +.+|+|||++++.+|++|++++.++..... ...+ ....+++
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~-~~~V~li~~~~~~~y~~~~l~~~~~~g~~~-~~~~------------~~~~~~~ 67 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLE-RPPI------------LAEADWY 67 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEECSSSSSBCSGGGGTHHHHTSSS-SCCB------------SSCTTHH
T ss_pred CCCEEEEcccHHHHHHHHHHHccCc-CCeEEEEECCCCCCcCCccccHHHhCCCCC-HHHh------------cCCHHHH
Confidence 3589999999999999999999997 678999999999999999998765532211 1111 2356788
Q ss_pred HHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcE
Q 011267 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 210 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~v 210 (489)
.+.+++++.+++|+.+|++.+++.+.+|+++.||+||+|||+.|. .|.++|.+.++++++++..++..+.+.+..++++
T Consensus 68 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~-~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~v 146 (410)
T 3ef6_A 68 GEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRAR-TMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRL 146 (410)
T ss_dssp HHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEE
T ss_pred HHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCccc-CCCCCCccccceEEeccHHHHHHHHHHhccCCeE
Confidence 999999999999999999999999999999999999999999987 4556787788999999999999998888889999
Q ss_pred EEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC
Q 011267 211 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE 290 (489)
Q Consensus 211 vViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~ 290 (489)
+|||+|++|+|+|..+.+.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++ ++.|+++..+ +.+..|+++
T Consensus 147 vViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~-~~~v~~i~~~--~~~~~v~~~ 223 (410)
T 3ef6_A 147 LIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVEL-GTGVVGFSGE--GQLEQVMAS 223 (410)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEEC-SCCEEEEECS--SSCCEEEET
T ss_pred EEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEe-CCEEEEEecc--CcEEEEEEC
Confidence 9999999999999999999999999999999998889999999999999999999999 9999999843 355578999
Q ss_pred CCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHH
Q 011267 291 DGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQH 370 (489)
Q Consensus 291 ~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~ 370 (489)
+|++++||.||+|+|.+|++++++.+|++.+ ++|.||++++|+.|+|||+|||+..+... |...+.++|..|..||+.
T Consensus 224 dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~ 301 (410)
T 3ef6_A 224 DGRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAA 301 (410)
T ss_dssp TSCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHH
T ss_pred CCCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHH
Confidence 9999999999999999999999999999988 67999999999999999999999987655 666778899999999999
Q ss_pred HHHHHhcCCCCCCCcCCceeeecccccCCCcceeeeeecCCcC--cEEEEccCC-CcEEEEEEECCEEEEEEeccCCHHH
Q 011267 371 CIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVESGSPEE 447 (489)
Q Consensus 371 ~a~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~ 447 (489)
+|+||++. ..+|..+||||+++|++. ++++|...+ +.+..++.+ ..|.++|+++|+|+|+++ +|++.+
T Consensus 302 aa~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~~~~~~ 372 (410)
T 3ef6_A 302 VAAAILGK-NVSAPQLPVSWTEIAGHR-------MQMAGDIEGPGDFVSRGMPGSGAALLFRLQERRIQAVVA-VDAPRD 372 (410)
T ss_dssp HHHHHTTC-CCCCCBCCEEEEEETTEE-------EEEESCSSSSSEEEEESCTTSSSEEEEEEETTEEEEEEE-ESCHHH
T ss_pred HHHHHcCC-CCCCCCCCeeEEEECCce-------EEEEcCCCCCCEEEEEeeCCCCeEEEEEEECCEEEEEEE-ECChHH
Confidence 99999964 467889999999999875 888997653 566677765 678999999999999996 899999
Q ss_pred hHHHHHHHhcCCCCChhhhcCCC
Q 011267 448 FQLLPTLARSQPFVDKAKLQQAS 470 (489)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~ 470 (489)
+..+++|+.++..++++.|.++.
T Consensus 373 ~~~~~~~i~~~~~~~~~~l~~~~ 395 (410)
T 3ef6_A 373 FALATRLVEARAAIEPARLADLS 395 (410)
T ss_dssp HHHHHHHHHHTCBCCHHHHHCTT
T ss_pred HHHHHHHHhCCCCCCHHHhcCCC
Confidence 99999999999999988887664
No 4
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=2.3e-54 Score=440.57 Aligned_cols=403 Identities=29% Similarity=0.475 Sum_probs=342.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+++||||||||+||++||..|++.|+ +.+|+|||+++..+|+++++++.++.... ....+ .....++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~-~~~~~-----------~~~~~~~ 69 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYLAGKA-TAESL-----------YLRTPDA 69 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSCCSCCBCSGGGGTTTTTTCS-CSGGG-----------BSSCHHH
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCc-CCCEEEEECCCCCCCcCCCCcHHHhCCCC-ChHHh-----------cccCHHH
Confidence 45899999999999999999999987 67899999999999999988876553211 11111 1345678
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCc---eEeecCHHHHHHHHHhhcC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG---VHYIRDVADADALISSLEK 206 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~g---v~~~~~~~~~~~~~~~~~~ 206 (489)
+++.+++++.+++|+.++++.+.|.+.+|+++.||+||+|||+.|. .|..+|.+.++ ++++++.+++.++.+.+..
T Consensus 70 ~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~-~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~ 148 (431)
T 1q1r_A 70 YAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPR-PLPVASGAVGKANNFRYLRTLEDAECIRRQLIA 148 (431)
T ss_dssp HHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-CCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCT
T ss_pred HHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCcc-CCCCCCcccCCCceEEEECCHHHHHHHHHHhhc
Confidence 8999999999999999999989999999989999999999999987 45556655556 8889999998888887778
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeC-CCCcEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAG-SDGRVA 285 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~-~~~~v~ 285 (489)
+++++|||+|++|+|+|..|.++|.+|+++++.++++++.+++.+.+.+.+.+++.||++++ ++.|+++... +++++.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~-~~~v~~i~~~~~~~~v~ 227 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRT-GTQVCGFEMSTDQQKVT 227 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEEC-SCCEEEEEECTTTCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEe-CCEEEEEEeccCCCcEE
Confidence 99999999999999999999999999999999999998878999999999999999999999 9999999852 346666
Q ss_pred EEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHH
Q 011267 286 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHAR 365 (489)
Q Consensus 286 ~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~ 365 (489)
.|.+++|++++||.||+|+|.+|++++++.+|++.+ ++|.||+++||+.|+|||+|||+..+....|...+.++|..|.
T Consensus 228 ~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~ 306 (431)
T 1q1r_A 228 AVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NGIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNAL 306 (431)
T ss_dssp EEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHH
T ss_pred EEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CCEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHH
Confidence 789999999999999999999999999999999887 5699999999999999999999998766667667788999999
Q ss_pred HHHHHHHHHHhcCCCCCCCcCCceeeecccccCCCcceeeeeecCCcC--cEEEEccCC-CcEEEEEEECCEEEEEEecc
Q 011267 366 QSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--ETIEIGNFD-PKIATFWIDSGKLKGVLVES 442 (489)
Q Consensus 366 ~~g~~~a~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~ 442 (489)
.||+.+|.||++. ..+|..+|++|+++|+.. ++++|.... +.+..++.+ ..+.++|.++++|+|+++ +
T Consensus 307 ~qg~~aa~~i~g~-~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~ 377 (431)
T 1q1r_A 307 EQARKIAAILCGK-VPRDEAAPWFWSDQYEIG-------LKMVGLSEGYDRIIVRGSLAQPDFSVFYLQGDRVLAVDT-V 377 (431)
T ss_dssp HHHHHHHHHHTTC-CCCCCCCCEEEEEETTEE-------EEEEECCTTCSEEEEEEETTTTEEEEEEEETTEEEEEEE-E
T ss_pred HHHHHHHHHhcCC-CCCCCCCCeEEEEECCce-------EEEEeCCCCCCEEEEEccCCCCeEEEEEEeCCEEEEEEE-E
Confidence 9999999999964 457888999999998764 777886543 345555554 457888889999999996 8
Q ss_pred CCHHHhHHHHHHHhcCCCCChhhhcCCC-cHHHHHH
Q 011267 443 GSPEEFQLLPTLARSQPFVDKAKLQQAS-SVEEALE 477 (489)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~ 477 (489)
|+......++.++..+..++...|.++. .+.+.++
T Consensus 378 g~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~ 413 (431)
T 1q1r_A 378 NRPVEFNQSKQIITDRLPVEPNLLGDESVPLKEIIA 413 (431)
T ss_dssp SCHHHHHHHHHHHHTTCCCCHHHHTCTTSCHHHHHH
T ss_pred CChHHHHHHHHHHHCCCCCCHHHhhCCCCCHHHHHH
Confidence 8888888999999999999988876654 4444444
No 5
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.5e-55 Score=441.78 Aligned_cols=375 Identities=21% Similarity=0.302 Sum_probs=318.8
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
+.++++|||||||+||++||.+|++. +.+|+|||++++.+|.+|++++ ++... .....+ .....
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~---~~~itlie~~~~~~y~~~~l~~-~l~g~-~~~~~l-----------~~~~~ 69 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGK---CDDITMINSEKYLPYYRPRLNE-IIAKN-KSIDDI-----------LIKKN 69 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTT---CSCEEEECSSSSCCBCGGGHHH-HHHSC-CCGGGT-----------BSSCH
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCC---CCEEEEEECCCCCCcccChhhH-HHcCC-CCHHHc-----------cCCCH
Confidence 55788999999999999999999433 5689999999999999999987 33221 111121 24678
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcCC
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA 207 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~ 207 (489)
+|+++.+++++++++|+.+|++.++|++.+|+++.||+||+|||++|+. |.++|.+ +++++++.+++.++.+.+..+
T Consensus 70 ~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~-p~i~G~~--~v~~~~~~~d~~~l~~~l~~~ 146 (385)
T 3klj_A 70 DWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANK-IKVPHAD--EIFSLYSYDDALKIKDECKNK 146 (385)
T ss_dssp HHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CCCTTCS--CEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCC-CCCCCCC--CeEEeCCHHHHHHHHHHhhcC
Confidence 8999999999999999999999999999999999999999999999874 5567754 888999999999998887788
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAV 287 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v 287 (489)
++++|||+|++|+|+|..|++.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++ ++.++++
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~-~~~v~~i----------- 214 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYT-NSNFEEM----------- 214 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEEC-SCCGGGC-----------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEe-CCEEEEc-----------
Confidence 9999999999999999999999999999999999999889999999999999999999999 8877655
Q ss_pred EeCCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHH
Q 011267 288 KLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQS 367 (489)
Q Consensus 288 ~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~ 367 (489)
|++++||.||+|+|++|++++++.+|++.+ ++|.||+++||+.|+|||+|||+..+... ..+|..|..+
T Consensus 215 ----g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~q 283 (385)
T 3klj_A 215 ----GDLIRSSCVITAVGVKPNLDFIKDTEIASK-RGILVNDHMETSIKDIYACGDVAEFYGKN------PGLINIANKQ 283 (385)
T ss_dssp ----HHHHHHSEEEECCCEEECCGGGTTSCCCBS-SSEEECTTCBCSSTTEEECGGGEEETTBC------CCCHHHHHHH
T ss_pred ----CeEEecCeEEECcCcccChhhhhhcCCCcC-CCEEECCCcccCCCCEEEEEeeEecCCCc------ccHHHHHHHH
Confidence 567999999999999999999999999887 46999999999999999999999876532 3478899999
Q ss_pred HHHHHHHHhcCCCCCCCc-CCceeeecccccCCCcceeeeeecCCcC---cEEEEccCCCcEEEEEEECCEEEEEEeccC
Q 011267 368 AQHCIKALLSAQTHTYDY-LPYFYSRVFEYEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWIDSGKLKGVLVESG 443 (489)
Q Consensus 368 g~~~a~~l~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 443 (489)
|+.+|.||++. ..+|.. +|++|+++|+.. ++++|.... +.+.....+..|.++|+++|+|+|+++ +|
T Consensus 284 g~~aa~~i~g~-~~~~~~~~~~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~-~g 354 (385)
T 3klj_A 284 GEVAGLNACGE-DASYSEIIPSPILKVSGIS-------IISCGDIENNKPSKVFRSTQEDKYIVCMLKENKIDAAAV-IG 354 (385)
T ss_dssp HHHHHHHHTTC-CCCCCCCCCCCEEEETTEE-------EEEESCCTTCCCSEEEEEECSSCEEEEEEETTEEEEEEE-ES
T ss_pred HHHHHHHhcCC-CcCCCCCCCcEEEEeCCCc-------EEEEcCCCCCCCeEEEEECCCCeEEEEEEECCEEEEEEE-EC
Confidence 99999999964 456765 699999999865 788887653 334442224679999999999999996 88
Q ss_pred CHHHhHHHHHHHhcCCCCChhhhcCCCcHHHHHHH
Q 011267 444 SPEEFQLLPTLARSQPFVDKAKLQQASSVEEALEI 478 (489)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 478 (489)
+......++.+++++.+++.- +|++|.|+.
T Consensus 355 ~~~~~~~~~~~i~~~~~~~~~-----~~~~E~~~~ 384 (385)
T 3klj_A 355 DVSLGTKLKKAIDSSKSFDNI-----SSLDAILNN 384 (385)
T ss_dssp CHHHHHHHHHHHHTTCBCSCC-----SCHHHHHTT
T ss_pred CcHHHHHHHHHHHcCCCcccc-----cCHHHHHhh
Confidence 888888999999998877533 899998863
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=3.1e-54 Score=436.69 Aligned_cols=388 Identities=26% Similarity=0.405 Sum_probs=329.0
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChh
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (489)
++++||||||||+||++||.+|++.|+ +.+|+|||++++.+|.+|++++.++.... ...+ ...
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~-------------~~~- 67 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGD--AEKI-------------RLD- 67 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHHTC-CSCEEEEESSCSCCBCSGGGGTHHHHHCC--GGGS-------------BCC-
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCC-CCeEEEEECCCCCcccCCCCCHHHhCCCc--hhhh-------------hHH-
Confidence 356899999999999999999999987 66899999999999999888765543211 1111 011
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCC-CCCCCCceEeecCHHHHHHHHHhhcCC
Q 011267 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEK-IGGYLPGVHYIRDVADADALISSLEKA 207 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~-~g~~~~gv~~~~~~~~~~~~~~~~~~~ 207 (489)
++++.+++++.+++|+.++++.++|.+.+|.++.||+||+|||++|.. |.. +|.+ ++++++++.+++.++.+.+..+
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~-~~i~~G~~-~~v~~~~~~~~~~~l~~~~~~~ 145 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRA-LPTLQGAT-MPVHTLRTLEDARRIQAGLRPQ 145 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CGGGTTCS-SCEEECCSHHHHHHHHTTCCTT
T ss_pred HHHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCC-CCccCCCC-CcEEEECCHHHHHHHHHHhhcC
Confidence 556789999999889999999999999999899999999999999874 555 6765 7888899999988888777778
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAV 287 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v 287 (489)
++++|||+|++|+|+|..|.++|.+|+++++.++++++.+++++.+.+.+.+++.||++++ +++|++++ + + .|
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~-~~~v~~i~-~--~---~v 218 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF-ERSVTGSV-D--G---VV 218 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEE-SCCEEEEE-T--T---EE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEe-CCEEEEEE-C--C---EE
Confidence 9999999999999999999999999999999999998778999999999999999999999 99999997 3 2 57
Q ss_pred EeCCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHH
Q 011267 288 KLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQS 367 (489)
Q Consensus 288 ~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~ 367 (489)
++++|++++||.||+|+|.+|++++++++|++.++ +|.||+++||+.|+|||+|||+..+....|...+.++|..|..+
T Consensus 219 ~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~ 297 (408)
T 2gqw_A 219 LLDDGTRIAADMVVVGIGVLANDALARAAGLACDD-GIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQ 297 (408)
T ss_dssp EETTSCEEECSEEEECSCEEECCHHHHHHTCCBSS-SEECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHH
T ss_pred EECCCCEEEcCEEEECcCCCccHHHHHhCCCCCCC-CEEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHH
Confidence 78899999999999999999999999999998874 59999999999999999999999776555666667789999999
Q ss_pred HHHHHHHHhcCCCCCCCcCCceeeecccccCCCcceeeeeecC-CcCcEEEEccCC---CcEEEEEEECCEEEEEEeccC
Q 011267 368 AQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGD-NVGETIEIGNFD---PKIATFWIDSGKLKGVLVESG 443 (489)
Q Consensus 368 g~~~a~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~-~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~ 443 (489)
|+.+|.||++.....|..+|++|+++|+.. ++++|. ...+.+..++.. ..|.++|.++++|+|+++ .|
T Consensus 298 g~~aa~~i~g~~~~~~~~~p~~~~~~~~~~-------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~-~g 369 (408)
T 2gqw_A 298 GIAVARHLVDPTAPGYAELPWYWSDQGALR-------IQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATC-VN 369 (408)
T ss_dssp HHHHHHHHHCTTSCCCCCCCEEEEEETTEE-------EEEEECSCCSEEEEESCCCSSSCCEEEEEEETTEEEEEEE-ES
T ss_pred HHHHHHHhcCCCCCcCCCCCeEEEEECCce-------EEEECCCCCCEEEEEccCCCCCCeEEEEEEeCCEEEEEEE-EC
Confidence 999999999643227888999999999865 778886 222445555543 468889999999999996 78
Q ss_pred CHHHhHHHHHHHhcCCCCChhhhcCCCc
Q 011267 444 SPEEFQLLPTLARSQPFVDKAKLQQASS 471 (489)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (489)
...++..++.+++++.+++...+.++..
T Consensus 370 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~ 397 (408)
T 2gqw_A 370 NARDFAPLRRLLAVGAKPDRAALADPAT 397 (408)
T ss_dssp CHHHHHHHHHHHHTTCCCCHHHHHCTTC
T ss_pred ChHHHHHHHHHHHCCCCCChHHhcCCCC
Confidence 8888889999999999999887766643
No 7
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=5.2e-52 Score=429.91 Aligned_cols=405 Identities=23% Similarity=0.363 Sum_probs=310.9
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCC---CCCCCCccccCCCCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKP---ARLPGFHTCVGSGGER 124 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 124 (489)
.+.++||||||||+||++||.+|++.++ +.+|+|||++++.+|.+|++++.++....... ..+.++.... .....
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~-g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~-~~~~~ 85 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKE-RSIYF 85 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHST-TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCE-EESBS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCC-CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhccccccccccc-ccccc
Confidence 4456899999999999999999999865 67999999999999999998886654322100 0000000000 00000
Q ss_pred CChhHH---------HHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCC----CCceEee
Q 011267 125 QTPEWY---------KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYI 191 (489)
Q Consensus 125 ~~~~~~---------~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~----~~gv~~~ 191 (489)
...+++ .+.+++++++++|+.+|++.++|.+.+|.++.||+||||||++|..+| .++.. .++++++
T Consensus 86 ~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~-~~~~~~~~~~~~v~~~ 164 (493)
T 1m6i_A 86 QPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLS-AIDRAGAEVKSRTTLF 164 (493)
T ss_dssp SCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCH-HHHTSCHHHHHTEEEC
T ss_pred cchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC-CcccccccccCceEEE
Confidence 111111 256899999999999999999999999999999999999999987443 22321 3568888
Q ss_pred cCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHh----CCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEE
Q 011267 192 RDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVG----WKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFV 267 (489)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~----~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~ 267 (489)
++..++..+...+..+++++|||+|++|+|+|..|.+ .|.+|+++++.+.++.+.+++.+.+.+.+.+++.||+++
T Consensus 165 ~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~ 244 (493)
T 1m6i_A 165 RKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVM 244 (493)
T ss_dssp CSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred cCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEE
Confidence 9999988888877789999999999999999999976 478899999998888888899999999999999999999
Q ss_pred EcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec--CCcEEeCCCCCCCCCCeEEecccc
Q 011267 268 KVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS--VGGIQVDGQFRTRMPGIFAIGDVA 345 (489)
Q Consensus 268 ~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~--~g~i~vd~~~~t~~~~Iya~GD~a 345 (489)
+ ++.|+++..+ ++.+ .|++.+|++++||.||+|+|.+|++++++.+|++.+ +|+|.||++||| .|+|||+|||+
T Consensus 245 ~-~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a 320 (493)
T 1m6i_A 245 P-NAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAA 320 (493)
T ss_dssp C-SCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGE
T ss_pred e-CCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeE
Confidence 9 9999999753 3343 688899999999999999999999999999999886 378999999998 69999999999
Q ss_pred ccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCcCCceeeecccccCCCc----ceeeeeecCCcC-----c--
Q 011267 346 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPR----KVWWQFFGDNVG-----E-- 414 (489)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~G~~~~-----~-- 414 (489)
..+....|.. ++++|++|..||+.+|.||++ ...+|...||||++++...+... ...++++|.... .
T Consensus 321 ~~~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g-~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~~~~~ 398 (493)
T 1m6i_A 321 CFYDIKLGRR-RVEHHDHAVVSGRLAGENMTG-AAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPK 398 (493)
T ss_dssp EEEETTTEEE-CCCCHHHHHHHHHHHHHHHTS-CCCCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTTCSHH
T ss_pred eccCcccCcc-ccchHHHHHHHHHHHHHHhcC-CCCCcCCcCceeeeeccCcceEEEeccCCCcceEEeecccccccccc
Confidence 8765544543 577999999999999999996 45689999999999973211000 001233332100 0
Q ss_pred ----------------------EEEE----c-------c-CCCcEEEEEEECCEEEEEEeccCCHHHhHHHHHHHhcCCC
Q 011267 415 ----------------------TIEI----G-------N-FDPKIATFWIDSGKLKGVLVESGSPEEFQLLPTLARSQPF 460 (489)
Q Consensus 415 ----------------------~~~~----~-------~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 460 (489)
.... + + ...++.+||+++|+|+|+++ +|+++++..+++||+.+..
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~li~~~~~ 477 (493)
T 1m6i_A 399 SATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVL-WNIFNRMPIARKIIKDGEQ 477 (493)
T ss_dssp HHHHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEE-ESCCSCHHHHHHHHHHCCB
T ss_pred cccccccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEE-ecCcchHHHHHHHHhCCCC
Confidence 0000 0 1 12567889999999999996 8999999999999988876
Q ss_pred CC
Q 011267 461 VD 462 (489)
Q Consensus 461 ~~ 462 (489)
++
T Consensus 478 ~~ 479 (493)
T 1m6i_A 478 HE 479 (493)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 8
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=8.6e-49 Score=399.75 Aligned_cols=392 Identities=20% Similarity=0.284 Sum_probs=303.1
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCC-CCCCCCCCccccCCCCCCCChhHH
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDK-KPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
++|||||||+||++||.+|++.|. +.+|+|||++++.+|.++.+++ ++..... ....+ .....+++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~~~~-----------~~~~~~~~ 67 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDK-ESDIIIFEKDRDMSFANCALPY-VIGEVVEDRRYAL-----------AYTPEKFY 67 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCS-SSCEEEEESSSCSSBCGGGHHH-HHTTSSCCGGGTB-----------CCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCCCcchhHH-HHcCCccchhhhh-----------hcCHHHHH
Confidence 479999999999999999999986 7899999999999999887764 2211111 11111 13346788
Q ss_pred HHCCcEEEeCCcEEEEeCCCCEEEeCC-----CeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhh-
Q 011267 131 KEKGIEMIYQDPVTSIDIEKQTLITNS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL- 204 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~~~v~~~~-----g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~- 204 (489)
++.+++++.+++|+.+|.+.+.+.+.+ +.++.||+||||||++|.. |.+++ ++++.+++..++..+.+.+
T Consensus 68 ~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~-p~i~g---~~~~~~~~~~~~~~l~~~~~ 143 (437)
T 4eqs_A 68 DRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS-LGFES---DITFTLRNLEDTDAIDQFIK 143 (437)
T ss_dssp HHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECC-CCCCC---TTEECCSSHHHHHHHHHHHH
T ss_pred HhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccc-ccccC---ceEEeeccHHHHHHHHHhhh
Confidence 899999999999999999998776643 3468999999999999864 43333 5678888998888877654
Q ss_pred -cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCc
Q 011267 205 -EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGR 283 (489)
Q Consensus 205 -~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~ 283 (489)
..+++++|||+|++|+|+|..+.++|.+|+++++.+++++. +++++.+.+.+.++++||++++ +++|++++..
T Consensus 144 ~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~~l~~~gV~i~~-~~~v~~~~~~---- 217 (437)
T 4eqs_A 144 ANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYRL-NEEINAINGN---- 217 (437)
T ss_dssp HHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHHHHHHTTCCEEE-SCCEEEEETT----
T ss_pred ccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHHHhhccceEEEe-ccEEEEecCC----
Confidence 35789999999999999999999999999999999999984 7999999999999999999999 9999998732
Q ss_pred EEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHH
Q 011267 284 VAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVD 362 (489)
Q Consensus 284 v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~ 362 (489)
.+.+++|+++++|.|++|+|++||+++++.+|++.+ +|+|.||+++||++|||||+|||+..+....+.......+.
T Consensus 218 --~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~ 295 (437)
T 4eqs_A 218 --EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAW 295 (437)
T ss_dssp --EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHH
T ss_pred --eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHH
Confidence 578899999999999999999999999999999886 56799999999999999999999998887777777777889
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC-cCCceeeecccccCCCcceeeeeecCCcCc-------EEE--EccC-------CCcE
Q 011267 363 HARQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE--IGNF-------DPKI 425 (489)
Q Consensus 363 ~A~~~g~~~a~~l~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~G~~~~~-------~~~--~~~~-------~~~~ 425 (489)
.|.+||+.+|.||++.....+. ..+..+...++.+ +..+|....+ .+. .... ...+
T Consensus 296 ~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~-------ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~ 368 (437)
T 4eqs_A 296 GAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYT-------FASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLH 368 (437)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEE-------EEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEE
T ss_pred HHHHHHHHHHHHHcCCCCcccccceeEEeeeeccce-------EEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEE
Confidence 9999999999999976544432 3333333333322 4455554321 111 1110 1235
Q ss_pred EEEEEE--CCEEEEEEeccCC-HHHhHHH-HHHHhcCCCCC-hhhh--cCCCcHHHH
Q 011267 426 ATFWID--SGKLKGVLVESGS-PEEFQLL-PTLARSQPFVD-KAKL--QQASSVEEA 475 (489)
Q Consensus 426 ~~~~~~--~~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~~~-~~~~--~~~~~~~e~ 475 (489)
.++.++ +++|+|+++++.+ ++++... ..+|.++.+++ ...+ ..||+++++
T Consensus 369 ~Kli~d~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~~ 425 (437)
T 4eqs_A 369 LRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSHP 425 (437)
T ss_dssp EEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCS
T ss_pred EEEEEECCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCch
Confidence 566654 4899999986654 7766655 55678888876 3332 346777654
No 9
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.1e-48 Score=388.08 Aligned_cols=356 Identities=23% Similarity=0.386 Sum_probs=282.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
...||||||||+||++||.+|++.| +|+|||+++..+|.++.+++ ++.. ......+ .....++
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g----~V~lie~~~~~~~~~~~l~~-~~~g-~~~~~~~-----------~~~~~~~ 69 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY----EVTVIDKEPVPYYSKPMLSH-YIAG-FIPRNRL-----------FPYSLDW 69 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS----EEEEECSSSSCCCCSTTHHH-HHTT-SSCGGGG-----------CSSCHHH
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC----CEEEEECCCCCccccchhHH-HHhC-CCCHHHh-----------ccCCHHH
Confidence 4569999999999999999998875 79999999998898888765 2221 1111111 2345778
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCc
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKK 209 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~ 209 (489)
+++.+++++.+++|+.+|++.++|. .+|.++.||+||||||++|. .|.++| .++++++++..++.++.+.+..+++
T Consensus 70 ~~~~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~-~p~i~G--~~~v~~~~~~~~~~~l~~~~~~~~~ 145 (367)
T 1xhc_A 70 YRKRGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAR-EPQIKG--KEYLLTLRTIFDADRIKESIENSGE 145 (367)
T ss_dssp HHHHTEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEEC-CCCSBT--GGGEECCCSHHHHHHHHHHHHHHSE
T ss_pred HHhCCcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCC-CCCCCC--cCCEEEEcCHHHHHHHHHHhhcCCc
Confidence 8899999999989999999988888 77888999999999999987 455566 5678888888888888776666799
Q ss_pred EEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe
Q 011267 210 VVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL 289 (489)
Q Consensus 210 vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~ 289 (489)
++|||+|++|+|+|..|+++|.+|+++++.+++++ +++++.+.+.+.+++.||++++ +++|++++. . .+.+
T Consensus 146 vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~-~~~v~~i~~---~---~v~~ 216 (367)
T 1xhc_A 146 AIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFFL-NSELLEANE---E---GVLT 216 (367)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEEC-SCCEEEECS---S---EEEE
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHHCCCEEEc-CCEEEEEEe---e---EEEE
Confidence 99999999999999999999999999999999988 8999999999999999999999 999999962 1 4778
Q ss_pred CCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHH
Q 011267 290 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 369 (489)
Q Consensus 290 ~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~ 369 (489)
++|+ +++|.||+|+|++|++++++++|++.+ ++|.||+++||+.|+|||+|||+...... ...+..|..+|+
T Consensus 217 ~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg~ 288 (367)
T 1xhc_A 217 NSGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIGDCAEYSGII------AGTAKAAMEQAR 288 (367)
T ss_dssp TTEE-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEBTTBC------CCSHHHHHHHHH
T ss_pred CCCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeEeeeecCCCC------ccHHHHHHHHHH
Confidence 8887 999999999999999999999999887 56999999999999999999999754321 236788999999
Q ss_pred HHHHHHhcCCCCCCCcCCceee-ecccccCCCcceeeeeecCCcCcEEEEccCCCcEEEEEEECCEEEEEEeccCCHHHh
Q 011267 370 HCIKALLSAQTHTYDYLPYFYS-RVFEYEGSPRKVWWQFFGDNVGETIEIGNFDPKIATFWIDSGKLKGVLVESGSPEEF 448 (489)
Q Consensus 370 ~~a~~l~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 448 (489)
.+|.||++. ..+|...+.+|+ ..++.. +..+|....+.... ..|.++++++++|+|+++ .|.....
T Consensus 289 ~aa~~i~g~-~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~~~~~----~~~~k~~~~~~~ilG~~~-~g~~~~~ 355 (367)
T 1xhc_A 289 VLADILKGE-PRRYNFKFRSTVFKFGKLQ-------IAIIGNTKGEGKWI----EDNTKVFYENGKIIGAVV-FNDIRKA 355 (367)
T ss_dssp HHHHHHTTC-CCCCCSSCCEEEEEETTEE-------EEEEECCSSCEEEE----ETTEEEEC-----CEEEE-ESCHHHH
T ss_pred HHHHHhcCC-CccCCCCCCceEEEECCce-------EEEECCCCCCCccc----ceEEEEEEECCEEEEEEE-ECChHHH
Confidence 999999963 456666555543 555433 67788765432211 346788888899999996 7888888
Q ss_pred HHHHHHHh
Q 011267 449 QLLPTLAR 456 (489)
Q Consensus 449 ~~~~~~~~ 456 (489)
..+++++.
T Consensus 356 ~~~~~~i~ 363 (367)
T 1xhc_A 356 TKLEKEIL 363 (367)
T ss_dssp HHHC----
T ss_pred HHHHHHHh
Confidence 88888773
No 10
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.7e-48 Score=403.83 Aligned_cols=406 Identities=17% Similarity=0.261 Sum_probs=312.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+++||||||||+||++||..|++.|.++.+|+|||+++..+|..+.+.. ++......+..+ .....++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~ 101 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMAL-WIGEQIAGPEGL-----------FYSDKEE 101 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHH-HHTTSSSCSGGG-----------BSCCHHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccch-hhcCccCCHHHh-----------hhcCHHH
Confidence 4589999999999999999999987114589999999877665433221 111110111111 1334677
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEEEeC-CC--eEEeeCcEEecCCCCCCCCCCCCCCC-----------CCceEeecCHH
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTLITN-SG--KLLKYGSLIVATGCTASRFPEKIGGY-----------LPGVHYIRDVA 195 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v~~~-~g--~~i~yd~lvlATG~~~~~~p~~~g~~-----------~~gv~~~~~~~ 195 (489)
+++.+++++.+++|+.++.+.+.+.+. ++ .++.||+||+|||++|. .|.++|.+ .+++++++++.
T Consensus 102 ~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~ 180 (490)
T 2bc0_A 102 LESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPI-LPPIKGAEIKEGSLEFEATLENLQFVKLYQ 180 (490)
T ss_dssp HHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEEC-CCSCBTCCBCTTCTTCCBSSTTEEECSSHH
T ss_pred HHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcC-CCCCCCccccccccccccccCCEEEeCCHH
Confidence 888999999999999999988888876 54 57999999999999987 45567765 57888999999
Q ss_pred HHHHHHHhh--cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceE
Q 011267 196 DADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASI 273 (489)
Q Consensus 196 ~~~~~~~~~--~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v 273 (489)
+++.+++.. ..+++++|||+|++|+|+|..|+++|.+|+++++.++++++.+++++.+.+.+.+++.||++++ +++|
T Consensus 181 ~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~-~~~v 259 (490)
T 2bc0_A 181 NSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAF-GETV 259 (490)
T ss_dssp HHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEE-TCCE
T ss_pred HHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEe-CCEE
Confidence 999888877 6789999999999999999999999999999999999998778999999999999999999999 9999
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccC
Q 011267 274 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY 352 (489)
Q Consensus 274 ~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~ 352 (489)
+++.. ++++..+.+ +|++++||.||+|+|++|++++++.. ++.+ +|+|.||+++||+.|+|||+|||+..+....
T Consensus 260 ~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~ 335 (490)
T 2bc0_A 260 KEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNAT 335 (490)
T ss_dssp EEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTT
T ss_pred EEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEECCCcccCCCCEEEeeeeEEeccccC
Confidence 99984 444444555 67789999999999999999998877 7765 5679999999999999999999998765544
Q ss_pred CcccccccHHHHHHHHHHHHHHHhcCCCCCC-CcCCceeeecccccCCCcceeeeeecCCcC-------cEEE-------
Q 011267 353 DRTARVEHVDHARQSAQHCIKALLSAQTHTY-DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE------- 417 (489)
Q Consensus 353 ~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~-------~~~~------- 417 (489)
+...++.++..|..+|+.+|.||++.. .++ ...+++|+.+|+.. +..+|.... +...
T Consensus 336 g~~~~~~~~~~A~~qg~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~ 407 (490)
T 2bc0_A 336 RDTNYIALASNAVRTGIVAAHNACGTD-LEGIGVQGSNGISIYGLH-------MVSTGLTLEKAKRLGFDAAVTEYTDNQ 407 (490)
T ss_dssp TEEECCCCHHHHHHHHHHHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEES
T ss_pred CceeecccHHHHHHHHHHHHHHhcCCC-CCCCCcccceEEEECCcE-------eEEeeCCHHHHHHcCCceEEEEEecCC
Confidence 554445688899999999999999643 333 34678888888643 566775432 1111
Q ss_pred EccC-----CCcEEEEEEE--CCEEEEEEeccC-CHHHh-HHHHHHHhcCCCCC-hhh--hcCCCcHHHHHHHHHc
Q 011267 418 IGNF-----DPKIATFWID--SGKLKGVLVESG-SPEEF-QLLPTLARSQPFVD-KAK--LQQASSVEEALEIARA 481 (489)
Q Consensus 418 ~~~~-----~~~~~~~~~~--~~~~~g~~~~~~-~~~~~-~~~~~~~~~~~~~~-~~~--~~~~~~~~e~~~~~~~ 481 (489)
.... ...+.+++++ +++|+|++++.. ++.++ ..+..+|..+.+++ ... +..+|++.|++..+..
T Consensus 408 ~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~ 483 (490)
T 2bc0_A 408 KPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKPYNYITM 483 (490)
T ss_dssp SCTTCCSSCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCCTTCHHHH
T ss_pred cccccCCCCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCchhHHHHH
Confidence 1111 1235566664 599999998665 45554 55677888888886 332 5788999987655543
No 11
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.4e-48 Score=400.95 Aligned_cols=402 Identities=20% Similarity=0.268 Sum_probs=311.8
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCC--CCCCCCCCccccCCCCCCCChhH
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDK--KPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+||||||||+||++||.+|++.+. +.+|+|||+++..+|..+.+.. ++..... .+..+ .....++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----------~~~~~~~ 67 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHP-DADVTAYEMNDNISFLSCGIAL-YLGKEIKNNDPRGL-----------FYSSPEE 67 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT-TCEEEEEESSSCCCBCGGGHHH-HHTTCBGGGCGGGG-----------BSCCHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCCcccccchh-hhcCCcccCCHHHh-----------hhcCHHH
Confidence 589999999999999999999842 4589999999887775443321 1111000 01111 2345677
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEEEeCC-----CeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhh
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTLITNS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v~~~~-----g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~ 204 (489)
+++.+++++.+++|..++.+.+++.+.+ +.++.||+||+|||++|. .|.++|.+.+++++++++.+++.+++..
T Consensus 68 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~ 146 (452)
T 2cdu_A 68 LSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPT-VPPIPGIDSSRVYLCKNYNDAKKLFEEA 146 (452)
T ss_dssp HHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTTTSTTEEECSSHHHHHHHHHHG
T ss_pred HHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcC-CCCCCCCCCCCEEEeCcHHHHHHHHHHh
Confidence 8889999999888999998888887754 567999999999999987 4556776667889999999999988888
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcE
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRV 284 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v 284 (489)
..+++++|||+|++|+|+|..|.++|.+|+++++.++++++.+++++.+.+.+.+++.||++++ +++|+++... ++++
T Consensus 147 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~-~~~v~~i~~~-~~~v 224 (452)
T 2cdu_A 147 PKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVL-GSKVAAFEEV-DDEI 224 (452)
T ss_dssp GGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE-SSCEEEEEEE-TTEE
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEc-CCeeEEEEcC-CCeE
Confidence 8899999999999999999999999999999999999998779999999999999999999999 9999999842 4555
Q ss_pred EEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHH
Q 011267 285 AAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDH 363 (489)
Q Consensus 285 ~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~ 363 (489)
..+.+ +|+++++|.||+|+|++|++++++.. ++.+ +|+|.||+++||+.|+|||+|||+..+....|...++.++..
T Consensus 225 ~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~ 302 (452)
T 2cdu_A 225 ITKTL-DGKEIKSDIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATN 302 (452)
T ss_dssp EEEET-TSCEEEESEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHH
T ss_pred EEEEe-CCCEEECCEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHH
Confidence 55555 77899999999999999999998887 7775 567999999999999999999999876555555445668899
Q ss_pred HHHHHHHHHHHHhcCCCCCC-CcCCceeeecccccCCCcceeeeeecCCcC-------cEEE-----Ecc------CCCc
Q 011267 364 ARQSAQHCIKALLSAQTHTY-DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE-----IGN------FDPK 424 (489)
Q Consensus 364 A~~~g~~~a~~l~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~-------~~~~-----~~~------~~~~ 424 (489)
|..+|+.+|.||++.. ..+ ...+++|+.+|+.. +..+|.... +... ... ....
T Consensus 303 A~~~g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (452)
T 2cdu_A 303 AVRQGRLVGLNLTEDK-VKDMGTQSSSGLKLYGRT-------YVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEV 374 (452)
T ss_dssp HHHHHHHHHHTSSSCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEE
T ss_pred HHHHHHHHHHHhCCCC-CcCCCccceEEEEECCee-------eEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceE
Confidence 9999999999998643 333 34678889888653 666776432 1110 111 1123
Q ss_pred EEEEEEE--CCEEEEEEeccC-CHHHh-HHHHHHHhcCCCCC-hhh--hcCCCcHHHHHHHH
Q 011267 425 IATFWID--SGKLKGVLVESG-SPEEF-QLLPTLARSQPFVD-KAK--LQQASSVEEALEIA 479 (489)
Q Consensus 425 ~~~~~~~--~~~~~g~~~~~~-~~~~~-~~~~~~~~~~~~~~-~~~--~~~~~~~~e~~~~~ 479 (489)
+.+++++ +++|+|+++++. ++.++ ..+..++..+.+++ ... +..|||+.|++..+
T Consensus 375 ~~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~ 436 (452)
T 2cdu_A 375 LMSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPFNYL 436 (452)
T ss_dssp EEEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSSCHH
T ss_pred EEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCchHHHH
Confidence 5566664 599999998665 45554 45567788888876 332 57789988875544
No 12
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=6.3e-48 Score=398.20 Aligned_cols=412 Identities=22% Similarity=0.315 Sum_probs=289.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+++||||||||+||++||.+|++.+. +.+|+|||+++..+|.++.++. ++.........+...+ .......++
T Consensus 2 ~~~~VvIIGaG~aGl~aA~~L~~~~~-g~~Vtvie~~~~~~~~~~gl~~-~~~g~~~~~~~~~~~~-----~~~~~~~~~ 74 (472)
T 3iwa_A 2 SLKHVVVIGAVALGPKAACRFKRLDP-EAHVTMIDQASRISYGGCGIPY-YVSGEVSNIESLQATP-----YNVVRDPEF 74 (472)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHCT-TSEEEEECCC-------------------------------------------
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCcccccccccch-hhcCCCCchHHhcccc-----chhccCHHH
Confidence 35799999999999999999999853 5589999999999888776653 2211111111110000 001223344
Q ss_pred HH-HCCcEEEeCCcEEEEeCCCCEEEeCC---Ce--EEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHh
Q 011267 130 YK-EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISS 203 (489)
Q Consensus 130 ~~-~~~i~~~~~~~V~~id~~~~~v~~~~---g~--~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~ 203 (489)
+. +.+++++.+++|+.++++.+.+.+.+ |. ++.||+||+|||+.|. .|..+|.+.++++++++..+...+...
T Consensus 75 ~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~ 153 (472)
T 3iwa_A 75 FRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKAN-RPPVEGMDLAGVTPVTNLDEAEFVQHA 153 (472)
T ss_dssp ------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCSCTTTTSBTEEECCSHHHHHHHHHH
T ss_pred HhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcC-CCCCCCCCCCCEEEeCCHHHHHHHHHH
Confidence 44 58999999999999999999888764 65 7899999999999886 466677767788888888888888766
Q ss_pred hc--CCCcEEEECCCHHHHHHHHHHHhC-CCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCC
Q 011267 204 LE--KAKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGS 280 (489)
Q Consensus 204 ~~--~~~~vvViG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~ 280 (489)
+. .+++++|||+|++|+|+|..+.+. |.+|+++++.++++++.+++.+.+.+.+.+++.||++++ +++|++++..
T Consensus 154 l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~-~~~v~~i~~~- 231 (472)
T 3iwa_A 154 ISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHT-GEKVVRLEGE- 231 (472)
T ss_dssp CCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEEC-SCCEEEEEES-
T ss_pred hhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEe-CCEEEEEEcc-
Confidence 53 478999999999999999999999 999999999999998678999999999999999999999 9999999853
Q ss_pred CCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccc
Q 011267 281 DGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVE 359 (489)
Q Consensus 281 ~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~ 359 (489)
++.+. +.+.+|++++||.||+|+|++|++++++.+|++.+ +|+|.||+++||+.|+|||+|||+..+....|......
T Consensus 232 ~~~v~-v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~ 310 (472)
T 3iwa_A 232 NGKVA-RVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFP 310 (472)
T ss_dssp SSBEE-EEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCC
T ss_pred CCeEE-EEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeecc
Confidence 45553 77889999999999999999999999999999886 57899999999999999999999987766556555556
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCCCCcCCceeeecccccCCCcceeeeeecCCcCc-------E--EEEc---------cC
Q 011267 360 HVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T--IEIG---------NF 421 (489)
Q Consensus 360 ~~~~A~~~g~~~a~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~~-------~--~~~~---------~~ 421 (489)
++..|..+|+.+|.||++........+|++|...++.. +..+|....+ . .... +.
T Consensus 311 ~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~-------~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~ 383 (472)
T 3iwa_A 311 LGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGS-------ASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEK 383 (472)
T ss_dssp CTTHHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCE-------EEEEECCHHHHHHTTCCEEEEEEEC----------
T ss_pred hHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCce-------eEEEECCHHHHHHcCCceEEEEEecCCccCccCCC
Confidence 77789999999999999754332234677887777643 5666754321 1 1111 11
Q ss_pred CCcEEEEEEE--CCEEEEEEeccC---CHHHh-HHHHHHHhcCCCCC-hhh-hcCC-CcHHHHHHHH
Q 011267 422 DPKIATFWID--SGKLKGVLVESG---SPEEF-QLLPTLARSQPFVD-KAK-LQQA-SSVEEALEIA 479 (489)
Q Consensus 422 ~~~~~~~~~~--~~~~~g~~~~~~---~~~~~-~~~~~~~~~~~~~~-~~~-~~~~-~~~~e~~~~~ 479 (489)
...+.++.++ +++|+|+++++. .+.++ ..+..+|+.+.+++ ... .+.+ |++.|++...
T Consensus 384 ~~~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~~ 450 (472)
T 3iwa_A 384 TIMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYSPPFASAMDIV 450 (472)
T ss_dssp -CEEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC--------CCHH
T ss_pred ceEEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCCcccHH
Confidence 1235666664 599999998555 22444 44556678888775 333 3444 8888876543
No 13
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=2.1e-47 Score=391.98 Aligned_cols=396 Identities=19% Similarity=0.224 Sum_probs=301.3
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHHH
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (489)
+||||||||+||++||.+|++.+. +.+|+|||+++..+|.++.+.. ++.........+ .....+++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~g~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~ 69 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYP-QAEISLIDKQATVGYLSGGLSA-YFNHTINELHEA-----------RYITEEELR 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCCSSCCC----------------------------CCCCHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCcccCccchh-hhcCCCCCHHHh-----------hcCCHHHHH
Confidence 699999999999999999999853 5589999999998887655543 221111111111 134678889
Q ss_pred HCCcEEEeCCcEEEEeCCCCEEEeC---CCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCC
Q 011267 132 EKGIEMIYQDPVTSIDIEKQTLITN---SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (489)
Q Consensus 132 ~~~i~~~~~~~V~~id~~~~~v~~~---~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~ 208 (489)
+.+++++.+++|+.+|++.+.+.+. ++.++.||+||+|||++|. .|..+|.+.+++++.+++.+.+.+++....++
T Consensus 70 ~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 148 (452)
T 3oc4_A 70 RQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQF-STQIRGSQTEKLLKYKFLSGALAAVPLLENSQ 148 (452)
T ss_dssp HTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBC-CCCCBTTTCTTEEEGGGCC----CCHHHHTCS
T ss_pred HCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCC
Confidence 9999999999999999999888763 5668999999999999987 46667877788888887777777766667889
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEE
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVK 288 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~ 288 (489)
+++|||+|++|+|+|..+.++|.+|+++++.++++++.+++++.+.+.+.+++.||++++ ++.|++++.. ++++ .|.
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~-~~~v~~i~~~-~~~v-~v~ 225 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHF-EETVLGIEET-ANGI-VLE 225 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEE-TCCEEEEEEC-SSCE-EEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEe-CCEEEEEEcc-CCeE-EEE
Confidence 999999999999999999999999999999999998778999999999999999999999 9999999853 4455 677
Q ss_pred eCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHH
Q 011267 289 LEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQS 367 (489)
Q Consensus 289 ~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~ 367 (489)
+++| +++||.||+|+|++|++++++.. ++.+ +|+|.||+++||+.|+|||+|||+..+....+.......+..|..+
T Consensus 226 ~~~g-~i~aD~Vv~A~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~ 303 (452)
T 3oc4_A 226 TSEQ-EISCDSGIFALNLHPQLAYLDKK-IQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRT 303 (452)
T ss_dssp ESSC-EEEESEEEECSCCBCCCSSCCTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHH
T ss_pred ECCC-EEEeCEEEECcCCCCChHHHHhh-hccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHH
Confidence 8777 89999999999999999988765 6664 5789999999999999999999998765544544445578889999
Q ss_pred HHHHHHHHhcCCCCCCC-cCCceeeecccccCCCcceeeeeecCCcCc-------E--EEEc-------cCCCcEEEEEE
Q 011267 368 AQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------T--IEIG-------NFDPKIATFWI 430 (489)
Q Consensus 368 g~~~a~~l~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~G~~~~~-------~--~~~~-------~~~~~~~~~~~ 430 (489)
|+.+|.||++.. ..+. ..+..++.+|+.. +..+|....+ . .... +....+.++.+
T Consensus 304 g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~ 375 (452)
T 3oc4_A 304 GLVVANNLEEKT-HRFIGSLRTMGTKVGDYY-------LASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIY 375 (452)
T ss_dssp HHHHTTSSSSCC-CCCCCCCCCEEEEETTEE-------EEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEE
T ss_pred HHHHHHHhcCCC-ccCCCccccEEEEEcCee-------EEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEE
Confidence 999999998643 3343 2445667777643 5667764321 1 1110 11234677776
Q ss_pred EC--CEEEEEEeccC-CHHHhH-HHHHHHhcCCCCC-hhh--hcCCCcHHH
Q 011267 431 DS--GKLKGVLVESG-SPEEFQ-LLPTLARSQPFVD-KAK--LQQASSVEE 474 (489)
Q Consensus 431 ~~--~~~~g~~~~~~-~~~~~~-~~~~~~~~~~~~~-~~~--~~~~~~~~e 474 (489)
+. ++|+|+++++. ++.++. .+..+++++.+++ ... +..+|+++|
T Consensus 376 ~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~ 426 (452)
T 3oc4_A 376 DKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTN 426 (452)
T ss_dssp ETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSC
T ss_pred ECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCC
Confidence 64 99999998665 466644 5566788888876 332 467788877
No 14
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.3e-46 Score=378.20 Aligned_cols=368 Identities=21% Similarity=0.279 Sum_probs=289.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+++||||||||+||++||.+|++.|+ +.+|+|+|+++..+|.++.+++.+.. ......+. ......+
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~g~~~~~~~l~~~~~~--~~~~~~~~----------~~~~~~~ 69 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDG-ETPLLMITADDGRSYSKPMLSTGFSK--NKDADGLA----------MAEPGAM 69 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCS-SSCEEEECSSCCCEECGGGGGGTTTT--TCCHHHHE----------EECHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCC-CCCEEEEECCCCCccCcccccHHHhC--CCCHHHhh----------ccCHHHH
Confidence 35899999999999999999999986 67899999998777887777653221 11111110 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCc
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKK 209 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~ 209 (489)
+++.+++++.+++|..++.+.++|.+.+ .++.||+||+|||+.|. .|..+|...+++++.+++.+...+...+..+++
T Consensus 70 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~-~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 147 (384)
T 2v3a_A 70 AEQLNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPI-RVPVEGDAQDALYPINDLEDYARFRQAAAGKRR 147 (384)
T ss_dssp HHHTTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEEC-CCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCE
T ss_pred HHhCCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcC-CCCCCCcCcCCEEEECCHHHHHHHHHhhccCCe
Confidence 6788999999889999999888898865 46999999999999987 455677655778899999998888877778999
Q ss_pred EEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe
Q 011267 210 VVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL 289 (489)
Q Consensus 210 vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~ 289 (489)
++|||+|++|+|+|..|.+.|.+|+++++.++++++.+++.+.+.+.+.+++.||++++ +++|++++.++ +. ..+.+
T Consensus 148 v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~-~~~v~~i~~~~-~~-~~v~~ 224 (384)
T 2v3a_A 148 VLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHL-GPVLASLKKAG-EG-LEAHL 224 (384)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEE-SCCEEEEEEET-TE-EEEEE
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEe-CCEEEEEEecC-CE-EEEEE
Confidence 99999999999999999999999999999999998777999999999999999999999 99999998543 23 36788
Q ss_pred CCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHH
Q 011267 290 EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQ 369 (489)
Q Consensus 290 ~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~ 369 (489)
.+|+++++|.||+|+|.+|++++++.+|++.++| |.||+++||+.|+|||+|||+..+... ..++..|..+|+
T Consensus 225 ~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t~~~~IyA~GD~~~~~~~~------~~~~~~a~~~g~ 297 (384)
T 2v3a_A 225 SDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANIYALGDCAEVDGLN------LLYVMPLMACAR 297 (384)
T ss_dssp TTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBCSSTTEEECGGGEEETTBC------CCSHHHHHHHHH
T ss_pred CCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCCCCCCEEEeeeeeeECCCC------cchHHHHHHHHH
Confidence 8999999999999999999998999999998755 999999999999999999999754321 346778999999
Q ss_pred HHHHHHhcCCCCCCC--cCCce-eeecccccCCCcceeeeeecCCcC---cEEEEccCCCcEEEEEEE-CCEEEEEEecc
Q 011267 370 HCIKALLSAQTHTYD--YLPYF-YSRVFEYEGSPRKVWWQFFGDNVG---ETIEIGNFDPKIATFWID-SGKLKGVLVES 442 (489)
Q Consensus 370 ~~a~~l~~~~~~~~~--~~p~~-~~~~~~~~~~~~~~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~ 442 (489)
.+|+||++.. .+++ .+|++ |+. .+ .+++.|.... .....++ ...+.+++++ +++|+|++++.
T Consensus 298 ~~a~~i~g~~-~~~~~~~~p~~~~~~--~~-------~~~~~g~~~~~~~~~~~~~~-~~g~~~~~~~~~~~i~G~~~~g 366 (384)
T 2v3a_A 298 ALAQTLAGNP-SQVAYGPMPVTVKTP--AC-------PLVVSPPPRGMDGQWLVEGS-GTDLKVLCRDTAGRVIGYALTG 366 (384)
T ss_dssp HHHHHHTTCC-CCCCCCCCCEEECCT--TS-------CEEEECCCTTCCCEEEEEEE-TTEEEEEEECTTSCEEEEEEEG
T ss_pred HHHHHhcCCC-ccCCCCCcceEEEEC--Ce-------eEEEecCCCCCCceEEEEec-CCcEEEEEEccCCEEEEEEEEC
Confidence 9999999643 4444 45653 221 11 1566665432 2233333 2347777775 79999999866
Q ss_pred CCHHHhHHHHH
Q 011267 443 GSPEEFQLLPT 453 (489)
Q Consensus 443 ~~~~~~~~~~~ 453 (489)
..+.++..+.+
T Consensus 367 ~~a~e~~~~~~ 377 (384)
T 2v3a_A 367 AAVNEKLALNK 377 (384)
T ss_dssp GGGGGHHHHHT
T ss_pred cchHHHHHHHH
Confidence 66777655544
No 15
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.5e-46 Score=385.43 Aligned_cols=399 Identities=21% Similarity=0.254 Sum_probs=301.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+++||||||||+||++||.+|++.+. +.+|+|||+++..+|....++. ++... .....+ .....++
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~-~~~V~vie~~~~~~~~~~~~p~-~~~~~-~~~~~~-----------~~~~~~~ 67 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKP-EWDVKVFEATEWVSHAPCGIPY-VVEGL-STPDKL-----------MYYPPEV 67 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSSCCC-------------------------------------CT
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCc-CCCEEEEECCCccccCCcCCcc-ccCCC-CCHHHh-----------hhcCHHH
Confidence 46899999999999999999999864 5689999999987765444432 11111 111111 1223344
Q ss_pred H-HHCCcEEEeCCcEEEEeCCCCEEEeCCC-eEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhc--
Q 011267 130 Y-KEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE-- 205 (489)
Q Consensus 130 ~-~~~~i~~~~~~~V~~id~~~~~v~~~~g-~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~-- 205 (489)
+ ++.+++++.+++|+.++.+.+.+.+.++ .++.||+||+|||+.|. .|..+|.+.+++++.++..+...+.+...
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~ 146 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQ-VPAIEGVNLKGVFTADLPPDALAIREYMEKY 146 (449)
T ss_dssp HHHHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEEC-CCSCBTTTSTTEECSCSTHHHHHHHHHHSSS
T ss_pred HHHhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhc
Confidence 4 6889999999999999998888988888 48999999999999986 56677877788888888888888777665
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEE
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVA 285 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~ 285 (489)
.+++++|||+|++|+|+|..|.++|.+|+++++.++++++.+++++.+.+.+.+++. |++++ ++.+++++.. +.+.
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~-~~~v~~i~~~--~~v~ 222 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRL-QEITMKIEGE--ERVE 222 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEE-SCCEEEEECS--SSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEe-CCeEEEEecc--CcEE
Confidence 678999999999999999999999999999999999998778999999999999999 99999 9999999843 2433
Q ss_pred EEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHH
Q 011267 286 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHA 364 (489)
Q Consensus 286 ~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A 364 (489)
.+ +.+++++++|.||+|+|++|++++++.+|++.+ +|+|.||+++||+.|+|||+|||+..+....|...+...+..|
T Consensus 223 ~v-~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A 301 (449)
T 3kd9_A 223 KV-VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAG 301 (449)
T ss_dssp EE-EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHH
T ss_pred EE-EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHH
Confidence 33 456778999999999999999999999999886 5679999999999999999999998766555654456688899
Q ss_pred HHHHHHHHHHHhcCCCCCCC-cCCceeeecccccCCCcceeeeeecCCcC-------cEE--E---Ecc------CCCcE
Q 011267 365 RQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETI--E---IGN------FDPKI 425 (489)
Q Consensus 365 ~~~g~~~a~~l~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~G~~~~-------~~~--~---~~~------~~~~~ 425 (489)
..+|+.+|.||++.. ..+. ..+++|+..++.. +..+|.... +.. . .+. ....+
T Consensus 302 ~~~g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 373 (449)
T 3kd9_A 302 NKMGYVAGSNIAGKE-LHFPGVLGTAVTKFMDVE-------IGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIW 373 (449)
T ss_dssp HHHHHHHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEE
T ss_pred HHHHHHHHHHhcCCC-ccCCCcccceEEEEcCcE-------EEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEE
Confidence 999999999999744 3443 3577888777654 667776532 111 1 110 01236
Q ss_pred EEEEEEC--CEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-hhh--hcCCCcHHHHH
Q 011267 426 ATFWIDS--GKLKGVLVESGSPEEFQLL-PTLARSQPFVD-KAK--LQQASSVEEAL 476 (489)
Q Consensus 426 ~~~~~~~--~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~--~~~~~~~~e~~ 476 (489)
.++.++. ++|+|+++++..+.++... ..+++.+.+++ ... +..+|+++|+.
T Consensus 374 ~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~ 430 (449)
T 3kd9_A 374 LKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPVW 430 (449)
T ss_dssp EEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCSS
T ss_pred EEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCCch
Confidence 6776664 8999999877777776554 55678888775 332 34556665543
No 16
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=2.8e-47 Score=390.67 Aligned_cols=403 Identities=19% Similarity=0.267 Sum_probs=307.5
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHHH
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (489)
+||||||||+||++||.+|++.+. +.+|+|||+++..+|..+.+.. ++.........+ .....++++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~ 67 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHP-DAEIQWYEKGDFISFLSAGMQL-YLEGKVKDVNSV-----------RYMTGEKME 67 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TSEEEEEESSSSSSBCGGGHHH-HHTTSSCCGGGS-----------BSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCc-CCeEEEEECCCccCcccccchh-hhcCccCCHHHh-----------hcCCHHHHH
Confidence 489999999999999999999843 4589999999887765433321 111110011111 234567888
Q ss_pred HCCcEEEeCCcEEEEeCCCCEEEeCC---Ce--EEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhc-
Q 011267 132 EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE- 205 (489)
Q Consensus 132 ~~~i~~~~~~~V~~id~~~~~v~~~~---g~--~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~- 205 (489)
+.+++++.+++|+.++.+.++|.+.+ |+ ++.||+||+|||++|. .|.++|.+.++++++++..++.++.+.+.
T Consensus 68 ~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~ 146 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPF-ELDIPGKDLDNIYLMRGRQWAIKLKQKTVD 146 (447)
T ss_dssp HTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCSTTTTSBSEECCCHHHHHHHHHHHHTC
T ss_pred HCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcC-CCCCCCCCCCCeEEECCHHHHHHHHHHhhh
Confidence 89999988999999999888888754 64 4899999999999987 45667766678888888888888877666
Q ss_pred -CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcE
Q 011267 206 -KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRV 284 (489)
Q Consensus 206 -~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v 284 (489)
.+++++|||+|++|+|+|..|+++|.+|+++++.++++++.+++++.+.+.+.+++.||++++ ++.|++++.+ +++
T Consensus 147 ~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~-~~~v~~i~~~--~~v 223 (447)
T 1nhp_A 147 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIAT-GETVERYEGD--GRV 223 (447)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEE-SCCEEEEECS--SBC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEc-CCEEEEEEcc--CcE
Confidence 789999999999999999999999999999999999988778999999999999999999999 9999999843 444
Q ss_pred EEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHH
Q 011267 285 AAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDH 363 (489)
Q Consensus 285 ~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~ 363 (489)
..+.+ +++++++|.||+|+|.+|++++++.. ++.+ +|+|.||+++||+.|+|||+|||+..+....|...+..++..
T Consensus 224 ~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~ 301 (447)
T 1nhp_A 224 QKVVT-DKNAYDADLVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATN 301 (447)
T ss_dssp CEEEE-SSCEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHH
T ss_pred EEEEE-CCCEEECCEEEECcCCCCChHHHHhh-hhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHH
Confidence 34555 45689999999999999999998887 7765 567999999999999999999999866544454444568889
Q ss_pred HHHHHHHHHHHHhcCCCCCCC-cCCceeeecccccCCCcceeeeeecCCcC-------cE--E-E--Ecc------CCCc
Q 011267 364 ARQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ET--I-E--IGN------FDPK 424 (489)
Q Consensus 364 A~~~g~~~a~~l~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~G~~~~-------~~--~-~--~~~------~~~~ 424 (489)
|..+|+.+|.||++.. .++. ..+++|+..++.. +..+|.... +. . . ... ....
T Consensus 302 A~~qg~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (447)
T 1nhp_A 302 ARKQGRFAVKNLEEPV-KPFPGVQGSSGLAVFDYK-------FASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKA 373 (447)
T ss_dssp HHHHHHHHHHTSSSCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEE
T ss_pred HHHHHHHHHHhhcCCC-CCCCCccccEEEEECCee-------eEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceE
Confidence 9999999999998643 3343 4578888877654 556665432 01 1 1 111 0113
Q ss_pred EEEEEEE--CCEEEEEEeccCC-HHH-hHHHHHHHhcCCCCC-hhh--hcCCCcHHHHHHHHHc
Q 011267 425 IATFWID--SGKLKGVLVESGS-PEE-FQLLPTLARSQPFVD-KAK--LQQASSVEEALEIARA 481 (489)
Q Consensus 425 ~~~~~~~--~~~~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~-~~~--~~~~~~~~e~~~~~~~ 481 (489)
+.+++++ +++|+|+++++.. +.+ +..+..+|+++.+++ ... +..|||++|++..+..
T Consensus 374 ~~k~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~~ 437 (447)
T 1nhp_A 374 WFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFDKPWNIINT 437 (447)
T ss_dssp EEEEEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTCCSSCHHHH
T ss_pred EEEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCCcccHHHH
Confidence 5566665 5999999986665 544 445667889998886 333 4678999887655443
No 17
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=2e-46 Score=387.38 Aligned_cols=403 Identities=20% Similarity=0.307 Sum_probs=308.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
++||||||||+||++||.+|++.+. +.+|+|||+++..+|.++.++. ++.........+ .....+++
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~-g~~V~lie~~~~~~~~~~~~~~-~~~~~~~~~~~l-----------~~~~~~~~ 102 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDE-NANVVTLEKGEIYSYAQCGLPY-VISGAIASTEKL-----------IARNVKTF 102 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCT-TCEEEEECSSSCCSBCGGGHHH-HHTTSSSCGGGG-----------BSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCc-CCcEEEEECCCCCCCCCCCcch-hhcCCcCCHHHh-----------hhcCHHHH
Confidence 4699999999999999999999743 4589999999888777654432 221111111111 12345566
Q ss_pred -HHCCcEEEeCCcEEEEeCCCCEEEeCC---Ce--EEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhh
Q 011267 131 -KEKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (489)
Q Consensus 131 -~~~~i~~~~~~~V~~id~~~~~v~~~~---g~--~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~ 204 (489)
++.+++++.+++|+.++.+.+.+.+.+ |+ ++.||+||+|||+.|. .|.++|.+.++++++++.++..++.+.+
T Consensus 103 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~~ 181 (480)
T 3cgb_A 103 RDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV-MPEWEGRDLQGVHLLKTIPDAERILKTL 181 (480)
T ss_dssp HHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCBTTTSBTEECCSSHHHHHHHHHHH
T ss_pred HhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc-CCCCCCccCCCEEEeCCHHHHHHHHHHh
Confidence 445999999889999999888887753 65 7999999999999986 4556776667888888888888877766
Q ss_pred c--CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCC
Q 011267 205 E--KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDG 282 (489)
Q Consensus 205 ~--~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~ 282 (489)
. .+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.+.+++.||++++ ++.|+++..+ +
T Consensus 182 ~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~-~~~v~~i~~~--~ 257 (480)
T 3cgb_A 182 ETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-IYDGDMAEYIYKEADKHHIEILT-NENVKAFKGN--E 257 (480)
T ss_dssp HSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-SSCHHHHHHHHHHHHHTTCEEEC-SCCEEEEEES--S
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-cCCHHHHHHHHHHHHHcCcEEEc-CCEEEEEEcC--C
Confidence 5 789999999999999999999999999999999998888 58999999999999999999999 9999999853 4
Q ss_pred cEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccH
Q 011267 283 RVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 361 (489)
Q Consensus 283 ~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~ 361 (489)
++..+.+++ .+++||.||+|+|++|++++++.+|++.+ +|+|.||+++||+.|+|||+|||+..+....|...++.++
T Consensus 258 ~v~~v~~~~-~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~ 336 (480)
T 3cgb_A 258 RVEAVETDK-GTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIG 336 (480)
T ss_dssp BEEEEEETT-EEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCH
T ss_pred cEEEEEECC-CEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchH
Confidence 555566654 58999999999999999999999999876 5789999999999999999999998765544554445678
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCC-cCCceeeecccccCCCcceeeeeecCCcC-------c--E-EEEccC--------C
Q 011267 362 DHARQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------E--T-IEIGNF--------D 422 (489)
Q Consensus 362 ~~A~~~g~~~a~~l~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~G~~~~-------~--~-~~~~~~--------~ 422 (489)
..|..+|+.+|.||++. ...+. ..+++|+.+++.. +..+|.... + . ...... .
T Consensus 337 ~~A~~qg~~aa~~i~g~-~~~~~~~~~~~~~~~~~~~-------~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~ 408 (480)
T 3cgb_A 337 TTANKQGRLAGLNMLDK-RRAFKGTLGTGIIKFMNLT-------LARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAK 408 (480)
T ss_dssp HHHHHHHHHHHHHHTTC-CCCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCC
T ss_pred HHHHHHHHHHHHHhcCC-CccCCCccceeEEEECCcE-------EEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCc
Confidence 89999999999999863 34443 3456777777654 666775432 1 1 111110 1
Q ss_pred CcEEEEEEE--CCEEEEEEeccCC-HHH-hHHHHHHHhcCCCCC-hhh--hcCCCcHHHHHHHHH
Q 011267 423 PKIATFWID--SGKLKGVLVESGS-PEE-FQLLPTLARSQPFVD-KAK--LQQASSVEEALEIAR 480 (489)
Q Consensus 423 ~~~~~~~~~--~~~~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~-~~~--~~~~~~~~e~~~~~~ 480 (489)
..+.+++++ +++|+|++++... +.+ +..+..+|+++.+++ ... +..+||++|++..+.
T Consensus 409 ~~~~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~~~~ 473 (480)
T 3cgb_A 409 PLYLKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNSVWDPIQ 473 (480)
T ss_dssp EEEEEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCCSSCHHH
T ss_pred eEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCCCCCCchhHHH
Confidence 125666664 6999999986666 555 445677789998886 333 356899988665543
No 18
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=6.2e-46 Score=392.10 Aligned_cols=386 Identities=19% Similarity=0.336 Sum_probs=301.5
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHHH
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (489)
+||||||||+||++||.+|++.+. +.+|+|||+++..+|.++.++. ++.........+ .....+++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~-~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~~~-----------~~~~~~~~~ 68 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSE-TAEIIMFERGEYVSFANCGLPY-HISGEIAQRSAL-----------VLQTPESFK 68 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHH-HHTSSSCCGGGG-----------BCCCHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCCccccccCchH-HhcCCcCChHHh-----------hccCHHHHH
Confidence 689999999999999999999864 6699999999998888766553 221111111100 133445555
Q ss_pred -HCCcEEEeCCcEEEEeCCCCEEEeCC---Ce--EEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhh-
Q 011267 132 -EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL- 204 (489)
Q Consensus 132 -~~~i~~~~~~~V~~id~~~~~v~~~~---g~--~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~- 204 (489)
+.+++++++++|+.+|++.+.+.+.+ |. ++.||+||+|||+.|. .|..+|.+.++++++++..+++.+.+.+
T Consensus 69 ~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~ipG~~~~~v~~~~~~~~~~~l~~~~~ 147 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPI-VPPIPGVDNPLTHSLRNIPDMDRILQTIQ 147 (565)
T ss_dssp HHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTCCSTTEECCSSHHHHHHHHHHHH
T ss_pred HhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHh
Confidence 48999999999999999998887753 43 7899999999999987 4666787778888888888887776544
Q ss_pred -cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeC----
Q 011267 205 -EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAG---- 279 (489)
Q Consensus 205 -~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~---- 279 (489)
..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||++++ ++.|+++...
T Consensus 148 ~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~GV~i~~-~~~v~~i~~~~~~~ 225 (565)
T 3ntd_A 148 MNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT-PVDREMAGFAHQAIRDQGVDLRL-GTALSEVSYQVQTH 225 (565)
T ss_dssp HTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT-TSCHHHHHHHHHHHHHTTCEEEE-TCCEEEEEEECCCC
T ss_pred hCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch-hcCHHHHHHHHHHHHHCCCEEEe-CCeEEEEecccccc
Confidence 3578999999999999999999999999999999999998 58999999999999999999999 9999999852
Q ss_pred --------------CCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccc
Q 011267 280 --------------SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDV 344 (489)
Q Consensus 280 --------------~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~ 344 (489)
+++.+ .+.+.+|++++||.||+|+|++|++++++.+|++.+ +|+|.||+++||+.|+|||+|||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~ 304 (565)
T 3ntd_A 226 VASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDA 304 (565)
T ss_dssp CCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGG
T ss_pred ccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeee
Confidence 23444 467788999999999999999999999999999876 57899999999999999999999
Q ss_pred cccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCcC-CceeeecccccCCCcceeeeeecCCcCc---------
Q 011267 345 AAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYL-PYFYSRVFEYEGSPRKVWWQFFGDNVGE--------- 414 (489)
Q Consensus 345 a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~G~~~~~--------- 414 (489)
+..+....|......++..|..+|+.+|.||++.. ..|... +++|+.+|+.. +..+|....+
T Consensus 305 ~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-~~~~~~~~~~~~~~~~~~-------~~~vG~~e~~a~~~g~~~~ 376 (565)
T 3ntd_A 305 VEEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE-ERYQGTQGTAICKVFDLA-------VGATGKNEKQLKQAGIAFE 376 (565)
T ss_dssp BCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC-CCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCE
T ss_pred EeeccccCCceeecccHHHHHHHHHHHHHHhcCCC-ccCCCcccceEEEEcCcE-------EEEecCCHHHHHHcCCCeE
Confidence 98776666665556788899999999999999744 446554 45556677643 5667765321
Q ss_pred EEEEc---c--C----CCcEEEEEEE--CCEEEEEEeccCCH-HHhH-HHHHHHhcCCCCC
Q 011267 415 TIEIG---N--F----DPKIATFWID--SGKLKGVLVESGSP-EEFQ-LLPTLARSQPFVD 462 (489)
Q Consensus 415 ~~~~~---~--~----~~~~~~~~~~--~~~~~g~~~~~~~~-~~~~-~~~~~~~~~~~~~ 462 (489)
..... . . ...+.++.++ +++|+|+++++.++ .++. .+..+|+.+.+++
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~ 437 (565)
T 3ntd_A 377 KVYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVE 437 (565)
T ss_dssp EEEEEEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHH
T ss_pred EEEEecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHH
Confidence 11111 0 1 1235677663 59999999877776 5544 4556678887765
No 19
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.2e-43 Score=376.08 Aligned_cols=389 Identities=20% Similarity=0.306 Sum_probs=298.3
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
.++++||||||||+||++||.+|++.+. +.+|+|||+++..+|.++.++. ++.........+ ......
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~~~~~~~lp~-~~~g~~~~~~~~----------~~~~~~ 100 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSE-EDEIIMVERGEYISFANCGLPY-YIGGVITERQKL----------LVQTVE 100 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHH-HHTTSSCCGGGG----------BSSCHH
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCc-CCCEEEEECCCCccccCCCCch-hhcCcCCChHHh----------hccCHH
Confidence 4567899999999999999999999853 5689999999998888765543 221111101000 012234
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCCEEEeC---CCe--EEeeCcEEecCCCCCCCCCCCCCC-CCCceEeecCHHHHHHHH
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITN---SGK--LLKYGSLIVATGCTASRFPEKIGG-YLPGVHYIRDVADADALI 201 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~~~v~~~---~g~--~i~yd~lvlATG~~~~~~p~~~g~-~~~gv~~~~~~~~~~~~~ 201 (489)
.+.++.+++++++++|+.++++.+.+.+. +|. ++.||+||+|||+.|. .|.++|. +.+++++.++..+...+.
T Consensus 101 ~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~~v~~~~~~~~~~~~~ 179 (588)
T 3ics_A 101 RMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPI-VPSIPGIEEAKALFTLRNVPDTDRIK 179 (588)
T ss_dssp HHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCCCTTTTTCTTEEECSSHHHHHHHH
T ss_pred HHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCC-CCCCCCcccCCCeEEeCCHHHHHHHH
Confidence 45568899999999999999999888774 455 7899999999999886 4566776 677888999988888776
Q ss_pred Hhh--cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeC
Q 011267 202 SSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAG 279 (489)
Q Consensus 202 ~~~--~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~ 279 (489)
..+ ..+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++.||++++ ++.|++++..
T Consensus 180 ~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~-~~~v~~i~~~ 257 (588)
T 3ics_A 180 AYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVELVF-EDGVDALEEN 257 (588)
T ss_dssp HHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEEC-SCCEEEEEGG
T ss_pred HHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHHHHHHHcCCEEEE-CCeEEEEecC
Confidence 654 36899999999999999999999999999999999999986 8999999999999999999999 9999999853
Q ss_pred CCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCccccc
Q 011267 280 SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 358 (489)
Q Consensus 280 ~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~ 358 (489)
+ + .|.+.+|+++++|.||+|+|++|++++++.+|++.+ +|+|.||+++||+.|+|||+|||+..+....|.....
T Consensus 258 ~-~---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~ 333 (588)
T 3ics_A 258 G-A---VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMI 333 (588)
T ss_dssp G-T---EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECC
T ss_pred C-C---EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCccccc
Confidence 2 2 477889999999999999999999999999999875 5789999999999999999999998766555554446
Q ss_pred ccHHHHHHHHHHHHHHHhcCCCCCCC-cCCceeeecccccCCCcceeeeeecCCcCc---------EEE---EccC----
Q 011267 359 EHVDHARQSAQHCIKALLSAQTHTYD-YLPYFYSRVFEYEGSPRKVWWQFFGDNVGE---------TIE---IGNF---- 421 (489)
Q Consensus 359 ~~~~~A~~~g~~~a~~l~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~G~~~~~---------~~~---~~~~---- 421 (489)
..+..|..+|+.+|.||++.....+. .+|..+...++.. +..+|....+ ... ....
T Consensus 334 ~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~-------~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~ 406 (588)
T 3ics_A 334 PLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLT-------VATTGLNEKILKRLNIPYEVVHVQANSHAGYYP 406 (588)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEE-------EEEEECCHHHHHHTTCCCEEEEEEEESSCTTST
T ss_pred ccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeE-------EEEecCCHHHHHHcCCCeEEEEEecCCccccCC
Confidence 67888999999999999972333343 3555554445432 4556654311 111 1110
Q ss_pred --CCcEEEEEEE--CCEEEEEEeccCC-HHHhH-HHHHHHhcCCCCC
Q 011267 422 --DPKIATFWID--SGKLKGVLVESGS-PEEFQ-LLPTLARSQPFVD 462 (489)
Q Consensus 422 --~~~~~~~~~~--~~~~~g~~~~~~~-~~~~~-~~~~~~~~~~~~~ 462 (489)
...+.++.++ +++|+|+++++.+ +.++. .+..+++.+.+++
T Consensus 407 ~~~~~~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~ 453 (588)
T 3ics_A 407 NATPVLIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVL 453 (588)
T ss_dssp TCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTT
T ss_pred CCceEEEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHH
Confidence 1236666664 5999999986543 66554 4556678888876
No 20
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=9.4e-42 Score=355.79 Aligned_cols=402 Identities=20% Similarity=0.246 Sum_probs=285.5
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC----CCCCccccCC-----------CCCCCCCCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE----RPALTKGYLF-----------PLDKKPARLP 112 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~----~~~l~~~~~~-----------~~~~~~~~~~ 112 (489)
.+.++||||||||+||++||.+|++.|. +|+|||+++..... .+.-++.++. ........+.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~ 116 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGG---RQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMT 116 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHH
Confidence 3456899999999999999999999976 79999998743211 0000000000 0000000000
Q ss_pred C----CccccCCCCCCCCh---hHH-----HHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCC
Q 011267 113 G----FHTCVGSGGERQTP---EWY-----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEK 180 (489)
Q Consensus 113 ~----~~~~~~~~~~~~~~---~~~-----~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~ 180 (489)
. ..... ........ .++ ++.++++++..++..++. +++.+. +.++.||+||+|||+.|. .|.+
T Consensus 117 ~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~-~p~i 191 (523)
T 1mo9_A 117 EKVVGIKEVV-DLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPG-TLDV 191 (523)
T ss_dssp TCCCCHHHHH-HHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECC-CCCS
T ss_pred hhhhhHHHHH-HHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCC-CCCC
Confidence 0 00000 00000012 456 778999985568888886 567776 778999999999999987 4556
Q ss_pred CCCCCCceEeecCHHHHHHHH-HhhcCC-CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHH
Q 011267 181 IGGYLPGVHYIRDVADADALI-SSLEKA-KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQL 258 (489)
Q Consensus 181 ~g~~~~gv~~~~~~~~~~~~~-~~~~~~-~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~ 258 (489)
+|...+++++. +.+. ...... ++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.
T Consensus 192 ~G~~~~~v~~~------~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~ 264 (523)
T 1mo9_A 192 PGVNAKGVFDH------ATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLDR 264 (523)
T ss_dssp TTTTSBTEEEH------HHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHHH
T ss_pred CCcccCcEeeH------HHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHHH
Confidence 66544455432 2333 222234 99999999999999999999999999999999999985 899999999999
Q ss_pred HHhcCcEEEEcCceEEEEEeCCCCcE--EEEEeCCCc-EEEcCEEEEccCCCCCCc-hhhhcCCeec-CCcEEeCCCCCC
Q 011267 259 YQQNGVKFVKVGASIKNLEAGSDGRV--AAVKLEDGS-TIDADTIVIGIGAKPTVS-PFERVGLNSS-VGGIQVDGQFRT 333 (489)
Q Consensus 259 l~~~Gv~~~~~~~~v~~i~~~~~~~v--~~v~~~~g~-~i~aD~vi~a~G~~p~~~-~~~~~gl~~~-~g~i~vd~~~~t 333 (489)
+++.||++++ +++|+++...+++++ ..|++++|+ +++||.||+|+|++|+++ +++.+|++.+ +|+|.||+++||
T Consensus 265 l~~~GV~i~~-~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t 343 (523)
T 1mo9_A 265 MKEQGMEIIS-GSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQT 343 (523)
T ss_dssp HHHTTCEEES-SCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBC
T ss_pred HHhCCcEEEE-CCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCcc
Confidence 9999999999 999999986545543 357888887 899999999999999998 7999999986 567999999999
Q ss_pred CCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC-CCCcCCceeeecccccCCCcceeeeeecCCc
Q 011267 334 RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH-TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNV 412 (489)
Q Consensus 334 ~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~ 412 (489)
+.|+|||+|||+..+. .+..|..+|+.+|.||++.... .+..+|+++..... +..+|...
T Consensus 344 ~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~~~~~---------~a~vG~~e 404 (523)
T 1mo9_A 344 SVPNVYAVGDLIGGPM----------EMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYE---------VSFLGMGE 404 (523)
T ss_dssp SSTTEEECGGGGCSSC----------SHHHHHHHHHHHHHHHTTCCCCCCCCSCCEEEESSSE---------EEEEECCH
T ss_pred CCCCEEEEeecCCCcc----------cHHHHHHHHHHHHHHHcCCCCCCCCCCCCeEEECCCc---------eEEEeCCH
Confidence 9999999999997542 3456999999999999964321 24557765432111 34455432
Q ss_pred C-------cEEE----Ec------------------------cCCCcEEEEEEE--CCEEEEEEeccCCHHHh-HHHHHH
Q 011267 413 G-------ETIE----IG------------------------NFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTL 454 (489)
Q Consensus 413 ~-------~~~~----~~------------------------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~~ 454 (489)
. +... .. .....+.+++++ +++|+|+++++..+.++ ..+..+
T Consensus 405 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~a 484 (523)
T 1mo9_A 405 EEARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVL 484 (523)
T ss_dssp HHHHHTTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHH
Confidence 1 1111 00 111346777765 59999999866666654 555677
Q ss_pred HhcCCCCC-h-hh--hcCCCcHHHHHHHHHccCC
Q 011267 455 ARSQPFVD-K-AK--LQQASSVEEALEIARAALP 484 (489)
Q Consensus 455 ~~~~~~~~-~-~~--~~~~~~~~e~~~~~~~~~~ 484 (489)
|+++.+++ . .. ++.|||+.|++..+++..-
T Consensus 485 i~~~~t~~~l~~~~~~~~~Pt~~e~~~~~~~~~~ 518 (523)
T 1mo9_A 485 IKQGLTVDELGDMDELFLNPTHFIQLSRLRAGSK 518 (523)
T ss_dssp HHTTCBHHHHHTSCCCSSCSCCHHHHHHHHTTCS
T ss_pred HHCCCCHHHHHhCCcceECCCHHHHHHHHHHhhH
Confidence 89998886 2 33 6889999999999887754
No 21
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=2.4e-41 Score=348.55 Aligned_cols=397 Identities=16% Similarity=0.215 Sum_probs=280.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---------------------CCCCcc--ccCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---------------------RPALTK--GYLFPLDK 106 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~---------------------~~~l~~--~~~~~~~~ 106 (489)
.++||||||||+||++||.+|++.|. +|+|||++. .... .+.... + + +...
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g-~-~~~~ 76 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGA---QVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGG-I-AATV 76 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTT-S-CCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCC-c-cCCC
Confidence 46899999999999999999999876 799999983 1100 000000 0 0 0000
Q ss_pred CCCCCCCCccccCC--CCC--CCChhHHHHC-CcEEEeCCcEEEEeCCCCEEEeCCC--eEEeeCcEEecCCCCCCCCCC
Q 011267 107 KPARLPGFHTCVGS--GGE--RQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPE 179 (489)
Q Consensus 107 ~~~~~~~~~~~~~~--~~~--~~~~~~~~~~-~i~~~~~~~V~~id~~~~~v~~~~g--~~i~yd~lvlATG~~~~~~p~ 179 (489)
....+..+...... ... ....+++++. +++++.+ ++..++....++.+.+| .++.||+||+|||++|. .|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~-~p~ 154 (467)
T 1zk7_A 77 PTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPA-VPP 154 (467)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEEC-CCC
T ss_pred CccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCC-CCC
Confidence 00000000000000 000 0123455666 9999986 68888887777888888 78999999999999987 455
Q ss_pred CCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHH
Q 011267 180 KIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY 259 (489)
Q Consensus 180 ~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l 259 (489)
++|.+...+ + + .+.+.+....+++++|||+|++|+|+|..|.++|.+|+++++.+++++ +++.+.+.+.+.+
T Consensus 155 i~G~~~~~~--~-~---~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l 226 (467)
T 1zk7_A 155 IPGLKESPY--W-T---STEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVTAAF 226 (467)
T ss_dssp CTTTTTSCC--B-C---HHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHHHHH
T ss_pred CCCCCcCce--e-c---HHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHHHHH
Confidence 555433222 2 2 333434334589999999999999999999999999999999999988 7999999999999
Q ss_pred HhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCCC
Q 011267 260 QQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMP 336 (489)
Q Consensus 260 ~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~ 336 (489)
++.||++++ +++|+++..+ +....+.++ ++++++|.||+|+|.+|++++ ++.+|++.+ +|.|.||+++||+.|
T Consensus 227 ~~~Gv~i~~-~~~v~~i~~~--~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~~ 302 (467)
T 1zk7_A 227 RAEGIEVLE-HTQASQVAHM--DGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNP 302 (467)
T ss_dssp HHTTCEEET-TCCEEEEEEE--TTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSST
T ss_pred HhCCCEEEc-CCEEEEEEEe--CCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCCC
Confidence 999999999 9999999853 233356666 458999999999999999875 678899886 466999999999999
Q ss_pred CeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCcCCceeeecccccCCCcceeeeeecCCcC--
Q 011267 337 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-- 413 (489)
Q Consensus 337 ~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~-- 413 (489)
+|||+|||+..+. .+..|..+|+.+|.||++... ..+..+|++ ..++.. +..+|....
T Consensus 303 ~iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~--~~~~~~-------~a~vG~~~~~a 363 (467)
T 1zk7_A 303 NIYAAGDCTDQPQ----------FVYVAAAAGTRAAINMTGGDAALDLTAMPAV--VFTDPQ-------VATVGYSEAEA 363 (467)
T ss_dssp TEEECSTTBSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCCTTCEEE--ECSSSE-------EEEEECCHHHH
T ss_pred CEEEEeccCCCcc----------cHHHHHHHHHHHHHHHcCCCcccCCCCCCEE--EecCCc-------eEEEecCHHHH
Confidence 9999999998543 456799999999999987432 233445543 222211 445664321
Q ss_pred -----cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhH-HHHHHHhcCCCCC-h-hhhcCCCc
Q 011267 414 -----ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD-K-AKLQQASS 471 (489)
Q Consensus 414 -----~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~ 471 (489)
+... . ......+.+++++ +++|+|++++...+.++. .+..+|.++.+++ . ..++.|||
T Consensus 364 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt 443 (467)
T 1zk7_A 364 HHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLT 443 (467)
T ss_dssp HHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTS
T ss_pred HhcCCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCC
Confidence 1111 0 0112457788776 699999998666666644 5677788888876 2 44588999
Q ss_pred HHHHHHHHHccCCc
Q 011267 472 VEEALEIARAALPV 485 (489)
Q Consensus 472 ~~e~~~~~~~~~~~ 485 (489)
+.|+++.|++++..
T Consensus 444 ~~e~~~~~~~~~~~ 457 (467)
T 1zk7_A 444 MVEGLKLAAQTFNK 457 (467)
T ss_dssp TTHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887653
No 22
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.2e-42 Score=360.99 Aligned_cols=400 Identities=18% Similarity=0.198 Sum_probs=283.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCC---C-CCCccccCCC-------CCCCCCCCC----
Q 011267 51 NREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYE---R-PALTKGYLFP-------LDKKPARLP---- 112 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~---g~~~~~V~li~~~~~~~y~---~-~~l~~~~~~~-------~~~~~~~~~---- 112 (489)
++||||||||+||++||.+|++. |. +|+|||+++ .+.. . +.-++.++.. .......++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~---~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETT---QVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTE---EEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcC---EEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 47999999999999999999998 65 799999986 2110 0 0000000000 000000000
Q ss_pred ----CCccccCC------CCCCCChhHHHHCCcEEEeCCcEEEEeC------CCCEEEeCCCe--EEeeCcEEecCCCCC
Q 011267 113 ----GFHTCVGS------GGERQTPEWYKEKGIEMIYQDPVTSIDI------EKQTLITNSGK--LLKYGSLIVATGCTA 174 (489)
Q Consensus 113 ----~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~V~~id~------~~~~v~~~~g~--~i~yd~lvlATG~~~ 174 (489)
.+...... .......+++++.+++++.+ ++..++. ....+.+.+|. ++.||+||+|||+.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 00000000 00001235567789999987 5777877 23355556676 799999999999998
Q ss_pred CCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHH
Q 011267 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (489)
Q Consensus 175 ~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~ 254 (489)
. .|..+|.+..++.+..+.. .....+++++|||+|++|+|+|..+.++|.+|+++++.+++++. +++++.+.
T Consensus 157 ~-~p~i~g~~~~~v~~~~~~~------~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~ 228 (499)
T 1xdi_A 157 R-ILPSAQPDGERILTWRQLY------DLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADAALV 228 (499)
T ss_dssp C-CCGGGCCCSSSEEEGGGGG------GCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHHHHH
T ss_pred C-CCCCCCCCcCcEEehhHhh------hhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHH
Confidence 6 4555665444555443222 22235789999999999999999999999999999999999985 89999999
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCC
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQF 331 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~ 331 (489)
+.+.+++.||++++ ++.|++++.++ +.+ .+.+.+|+++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++
T Consensus 229 l~~~l~~~GV~i~~-~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~ 305 (499)
T 1xdi_A 229 LEESFAERGVRLFK-NARAASVTRTG-AGV-LVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVS 305 (499)
T ss_dssp HHHHHHHTTCEEET-TCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSS
T ss_pred HHHHHHHCCCEEEe-CCEEEEEEEeC-CEE-EEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCc
Confidence 99999999999999 99999998643 334 577888889999999999999999988 788999887 4679999999
Q ss_pred CCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCcCCceeeecccccCCCcceeeeeec
Q 011267 332 RTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFG 409 (489)
Q Consensus 332 ~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~G 409 (489)
||+.|+|||+|||+..+. .+..|..+|+.+|.||++..... |..+|+++ .++.. +..+|
T Consensus 306 ~t~~~~IyA~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~--~~~~~-------~a~vG 366 (499)
T 1xdi_A 306 RTLATGIYAAGDCTGLLP----------LASVAAMQGRIAMYHALGEGVSPIRLRTVAATV--FTRPE-------IAAVG 366 (499)
T ss_dssp BCSSTTEEECSGGGTSCS----------CHHHHHHHHHHHHHHHTTCCCCCCCGGGCEEEE--CSSSE-------EEEEE
T ss_pred ccCCCCEEEEeccCCCcc----------cHHHHHHHHHHHHHHhcCCCCccCCCCCCcEEE--EecCC-------ceEeC
Confidence 999999999999997532 44569999999999999742223 44556542 22221 55666
Q ss_pred CCcC-------cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhH-HHHHHHhcCCCCC--hhh
Q 011267 410 DNVG-------ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD--KAK 465 (489)
Q Consensus 410 ~~~~-------~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~ 465 (489)
.... +... . .+....+.+++++ +++|+|+++++..+.++. .+..+|+++.+++ ...
T Consensus 367 ~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~ 446 (499)
T 1xdi_A 367 VPQSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQT 446 (499)
T ss_dssp SCHHHHHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTS
T ss_pred CCHHHHHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcc
Confidence 5432 1111 0 0112357788776 599999998777766644 4566788888886 244
Q ss_pred hcCCCcHHHHHHHHHccCCc
Q 011267 466 LQQASSVEEALEIARAALPV 485 (489)
Q Consensus 466 ~~~~~~~~e~~~~~~~~~~~ 485 (489)
+..+||+.|++..+++++..
T Consensus 447 ~~~~Pt~~e~~~~~~~~~~~ 466 (499)
T 1xdi_A 447 LAVYPSLSGSITEAARRLMA 466 (499)
T ss_dssp BCCSSSTHHHHHHHHHHHCC
T ss_pred cccCCCchHHHHHHHHHHhc
Confidence 68889999999999887654
No 23
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.2e-41 Score=351.54 Aligned_cols=403 Identities=17% Similarity=0.240 Sum_probs=280.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC----CCCccccC----------------CC--CCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER----PALTKGYL----------------FP--LDK 106 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~----~~l~~~~~----------------~~--~~~ 106 (489)
+.++||||||||+||++||.+|++.|. +|+|||+++..+... +.-++.++ +. ...
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~ 80 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGF---KTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSE 80 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCC
Confidence 345899999999999999999999976 799999986532110 00000000 00 000
Q ss_pred CCCCCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCC-C-eEEeeCcEEecCCCCCCCCCCCC
Q 011267 107 KPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-G-KLLKYGSLIVATGCTASRFPEKI 181 (489)
Q Consensus 107 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~-g-~~i~yd~lvlATG~~~~~~p~~~ 181 (489)
...++..+..... ........+++++.+++++.+ ++..++.....|.+.+ + .++.||+||+|||+.|.. |..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~-p~i~ 158 (474)
T 1zmd_A 81 VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNG-YGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTP-FPGI 158 (474)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECC-CTTC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCC-CCCC
Confidence 0000000000000 000000134566789999987 4556777666677766 4 579999999999999864 4445
Q ss_pred CCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHh
Q 011267 182 GGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ 261 (489)
Q Consensus 182 g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~ 261 (489)
|.+..++. +..+ +......+++++|||+|++|+|+|..|.++|.+|+++++.++++++.+++++.+.+.+.+++
T Consensus 159 g~~~~~v~---t~~~---~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 232 (474)
T 1zmd_A 159 TIDEDTIV---SSTG---ALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQK 232 (474)
T ss_dssp CCCSSSEE---CHHH---HTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHH
T ss_pred CCCcCcEE---cHHH---HhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHH
Confidence 54333333 2222 22222357899999999999999999999999999999999999856899999999999999
Q ss_pred cCcEEEEcCceEEEEEeCCCCcEEEEEe-----CCCcEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCC
Q 011267 262 NGVKFVKVGASIKNLEAGSDGRVAAVKL-----EDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRT 333 (489)
Q Consensus 262 ~Gv~~~~~~~~v~~i~~~~~~~v~~v~~-----~~g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t 333 (489)
.||++++ +++|+++..++++.+ .+.+ .+++++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||
T Consensus 233 ~Gv~i~~-~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t 310 (474)
T 1zmd_A 233 QGFKFKL-NTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQT 310 (474)
T ss_dssp TTCEEEC-SEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCBC
T ss_pred CCCEEEe-CceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCcc
Confidence 9999999 999999986543323 3443 46678999999999999999987 788899876 467999999999
Q ss_pred CCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCcCCceeeecccccCCCcceeeeeecCCc
Q 011267 334 RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNV 412 (489)
Q Consensus 334 ~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~ 412 (489)
+.|+|||+|||+..+. .+..|..+|+.+|.||++... ..|..+|+++ .++.. +..+|...
T Consensus 311 ~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~--~~~~~-------~a~vG~~e 371 (474)
T 1zmd_A 311 KIPNIYAIGDVVAGPM----------LAHKAEDEGIICVEGMAGGAVHIDYNCVPSVI--YTHPE-------VAWVGKSE 371 (474)
T ss_dssp SSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHTTCCCCCCGGGCCEEE--CSSSE-------EEEEECCH
T ss_pred CCCCEEEeeecCCCCc----------cHHHHHHHHHHHHHHhcCCCCcCCCCCCCEEE--ECCCC-------eEEEeCCH
Confidence 9999999999997532 455699999999999996431 2344566543 22211 44556543
Q ss_pred C-------cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHH-hHHHHHHHhcCCCCC-h-hhhcC
Q 011267 413 G-------ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVD-K-AKLQQ 468 (489)
Q Consensus 413 ~-------~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~ 468 (489)
. +... . ......+.+++++ +++|+|+++++..+.+ +..+..+|..+.+++ . ..++.
T Consensus 372 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~ 451 (474)
T 1zmd_A 372 EQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHA 451 (474)
T ss_dssp HHHHHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCC
T ss_pred HHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCC
Confidence 2 1111 0 0112457788776 6999999986666655 445567788888876 2 44688
Q ss_pred CCcHHHHHHHHHccC
Q 011267 469 ASSVEEALEIARAAL 483 (489)
Q Consensus 469 ~~~~~e~~~~~~~~~ 483 (489)
|||+.|++..|+.++
T Consensus 452 ~Pt~~e~~~~~~~~~ 466 (474)
T 1zmd_A 452 HPTLSEAFREANLAA 466 (474)
T ss_dssp TTCTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999998653
No 24
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.6e-41 Score=349.84 Aligned_cols=399 Identities=16% Similarity=0.209 Sum_probs=278.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC----CCCccccCC-----------------CC-CCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER----PALTKGYLF-----------------PL-DKKP 108 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~----~~l~~~~~~-----------------~~-~~~~ 108 (489)
++||+|||||+||++||.+|++.|. +|+|||+++...... +.-++.++. +. ....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGM---KTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 4799999999999999999999986 799999986542110 000000000 00 0000
Q ss_pred CCCCCCcccc---CCCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC--eEEeeCcEEecCCCCCCCCCCCCCC
Q 011267 109 ARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGG 183 (489)
Q Consensus 109 ~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~i~yd~lvlATG~~~~~~p~~~g~ 183 (489)
.++..+.... .........+++++.+++++.++ +..++....++.+.+| .++.||+||+|||+.|.. |..++.
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~-p~~~g~ 156 (468)
T 2qae_A 79 MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGE-GSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTE-LPFLPF 156 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE-EEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC-BTTBCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCC-CCCCCC
Confidence 0000000000 00000001345567799999875 4558876667777788 789999999999998864 444554
Q ss_pred CCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHH-Hhc
Q 011267 184 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY-QQN 262 (489)
Q Consensus 184 ~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l-~~~ 262 (489)
+.+++. +..+ +......+++++|||+|++|+|+|..|.+.|.+|+++++.+++++ .+++++.+.+.+.+ ++.
T Consensus 157 ~~~~v~---t~~~---~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~~ 229 (468)
T 2qae_A 157 DEKVVL---SSTG---ALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-TLDEDVTNALVGALAKNE 229 (468)
T ss_dssp CSSSEE---CHHH---HHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHT
T ss_pred CcCcee---chHH---HhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-cCCHHHHHHHHHHHhhcC
Confidence 333433 2233 333223579999999999999999999999999999999999998 48999999999999 999
Q ss_pred CcEEEEcCceEEEEEeCCCCcEEEEEeC--CC--cEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCC
Q 011267 263 GVKFVKVGASIKNLEAGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRM 335 (489)
Q Consensus 263 Gv~~~~~~~~v~~i~~~~~~~v~~v~~~--~g--~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~ 335 (489)
||++++ +++|++++.++++ + .+.+. +| +++++|.||+|+|++|++++ ++.+|++.+ +|+|.||+++||+.
T Consensus 230 gv~i~~-~~~v~~i~~~~~~-~-~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~ 306 (468)
T 2qae_A 230 KMKFMT-STKVVGGTNNGDS-V-SLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFETSI 306 (468)
T ss_dssp CCEEEC-SCEEEEEEECSSS-E-EEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBCSS
T ss_pred CcEEEe-CCEEEEEEEcCCe-E-EEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcccCC
Confidence 999999 9999999864333 3 45554 66 67999999999999999988 788899886 46799999999999
Q ss_pred CCeEEeccccc-cCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCC--CcCCceeeecccccCCCcceeeeeecCCc
Q 011267 336 PGIFAIGDVAA-FPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTY--DYLPYFYSRVFEYEGSPRKVWWQFFGDNV 412 (489)
Q Consensus 336 ~~Iya~GD~a~-~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~G~~~ 412 (489)
|+|||+|||+. .+. .+..|..+|+.+|.||++. ..++ ..+|+ ...++.. +..+|...
T Consensus 307 ~~IyA~GD~~~~~~~----------~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~--~~~~~~~-------~a~vG~~e 366 (468)
T 2qae_A 307 PDVYAIGDVVDKGPM----------LAHKAEDEGVACAEILAGK-PGHVNYGVIPA--VIYTMPE-------VASVGKSE 366 (468)
T ss_dssp TTEEECGGGBSSSCS----------CHHHHHHHHHHHHHHHTTC-CCCCCTTSCCE--EECSSSE-------EEEEECCH
T ss_pred CCEEEeeccCCCCCc----------cHhHHHHHHHHHHHHHcCC-CccCCCCCCCE--EEECCCc-------eEEEeCCH
Confidence 99999999997 322 4556999999999999964 3333 34454 3322221 44556432
Q ss_pred C-------cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhH-HHHHHHhcCCCCC-h-hhhcC
Q 011267 413 G-------ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD-K-AKLQQ 468 (489)
Q Consensus 413 ~-------~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~ 468 (489)
. +... . ......+.+++++ +++|+|++++...+.++. .+..+|.++.+++ . ..++.
T Consensus 367 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~ 446 (468)
T 2qae_A 367 DELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHA 446 (468)
T ss_dssp HHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCC
T ss_pred HHHHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccC
Confidence 1 1111 0 0112457788776 699999998777766654 4466788888876 2 34588
Q ss_pred CCcHHHHHHHHHccCC
Q 011267 469 ASSVEEALEIARAALP 484 (489)
Q Consensus 469 ~~~~~e~~~~~~~~~~ 484 (489)
|||+.|++..|++++.
T Consensus 447 ~Pt~~e~~~~~~~~~~ 462 (468)
T 2qae_A 447 HPTMSEALKEACMALF 462 (468)
T ss_dssp SSCTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 9999999999987654
No 25
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-41 Score=349.81 Aligned_cols=397 Identities=19% Similarity=0.236 Sum_probs=275.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---C---CC--Cc--c---ccCCCCCCCCCCC-----
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---R---PA--LT--K---GYLFPLDKKPARL----- 111 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~---~---~~--l~--~---~~~~~~~~~~~~~----- 111 (489)
.++||+|||||+||++||.+|++.|. +|+|||++.. ... . |. +. . ..+..........
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~---~V~liE~~~~-GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 85 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGA---KTLLVEAKAL-GGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLD 85 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSC---CEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCC---cEEEEeCCCc-CCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccc
Confidence 46899999999999999999999876 7999999742 100 0 00 00 0 0000000000000
Q ss_pred C-----CCccccC------CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCe--EEeeCcEEecCCCCCCCCC
Q 011267 112 P-----GFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTASRFP 178 (489)
Q Consensus 112 ~-----~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~--~i~yd~lvlATG~~~~~~p 178 (489)
+ .+..... .........++++.+++++.+ ++..++.....+.+.+|+ ++.||+||+|||+.|.. |
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~-p 163 (479)
T 2hqm_A 86 KEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIF-P 163 (479)
T ss_dssp GGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECC-C
T ss_pred cccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC-C
Confidence 0 0000000 000000123345679999987 577777766667777776 79999999999999864 4
Q ss_pred -CCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHH
Q 011267 179 -EKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQ 257 (489)
Q Consensus 179 -~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~ 257 (489)
.++|. + ... +.+.+......+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.+
T Consensus 164 ~~i~g~--~---~~~---~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~ 234 (479)
T 2hqm_A 164 ENIPGF--E---LGT---DSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-KFDECIQNTITD 234 (479)
T ss_dssp TTSTTG--G---GSB---CHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHH
T ss_pred CCCCCc--c---ccc---chHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-ccCHHHHHHHHH
Confidence 44442 1 111 2333444334679999999999999999999999999999999999987 489999999999
Q ss_pred HHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCC-cEEEcCEEEEccCCCCCCch-hhhcCCeec-CCcEEeCCCCCCC
Q 011267 258 LYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDG-STIDADTIVIGIGAKPTVSP-FERVGLNSS-VGGIQVDGQFRTR 334 (489)
Q Consensus 258 ~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g-~~i~aD~vi~a~G~~p~~~~-~~~~gl~~~-~g~i~vd~~~~t~ 334 (489)
.+++.||++++ +++|++++..+++.+..|.+++| +++++|.||+|+|++|++.+ ++.+|++.+ +|+|.||+++||+
T Consensus 235 ~l~~~Gv~i~~-~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~t~ 313 (479)
T 2hqm_A 235 HYVKEGINVHK-LSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQNTN 313 (479)
T ss_dssp HHHHHTCEEEC-SCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCBCS
T ss_pred HHHhCCeEEEe-CCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCccC
Confidence 99999999999 99999998654443456888899 78999999999999999977 789999886 5779999999999
Q ss_pred CCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC---C--CCCCcCCceeeecccccCCCcceeeeeec
Q 011267 335 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ---T--HTYDYLPYFYSRVFEYEGSPRKVWWQFFG 409 (489)
Q Consensus 335 ~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~---~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~G 409 (489)
.|+|||+|||+..+ ..+..|..+|+.+|.||++.. . ..|..+|+. .|..+. +..+|
T Consensus 314 ~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~---~~~~~~------~~~vG 374 (479)
T 2hqm_A 314 VPNIYSLGDVVGKV----------ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSV---IFSHPE------AGSIG 374 (479)
T ss_dssp STTEEECGGGTTSS----------CCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEE---ECCSSC------EEEEE
T ss_pred CCCEEEEEecCCCc----------ccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeE---EECCCC------eEEEe
Confidence 99999999997642 256679999999999999643 2 234445542 222111 33444
Q ss_pred CCcCc---------EEEE------------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-
Q 011267 410 DNVGE---------TIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K- 463 (489)
Q Consensus 410 ~~~~~---------~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~- 463 (489)
....+ .... ......+.++.++ +++|+|+++++.++.++... ..++..+.+++ .
T Consensus 375 l~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~ 454 (479)
T 2hqm_A 375 ISEKEAIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFD 454 (479)
T ss_dssp CCHHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHH
T ss_pred CCHHHHHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHh
Confidence 32110 1110 1112346677665 59999999876667776655 45678888776 2
Q ss_pred hhhcCCCcHHHHHHHHHc
Q 011267 464 AKLQQASSVEEALEIARA 481 (489)
Q Consensus 464 ~~~~~~~~~~e~~~~~~~ 481 (489)
..+..|||+.|++..+++
T Consensus 455 ~~~~~hPt~~e~~~~~~~ 472 (479)
T 2hqm_A 455 NCVAIHPTSAEELVTMRG 472 (479)
T ss_dssp TSCCCSSCSGGGGGSCC-
T ss_pred hCcCCCCChHHHHHHHHH
Confidence 446889999999887654
No 26
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.2e-41 Score=349.52 Aligned_cols=396 Identities=21% Similarity=0.264 Sum_probs=273.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---C-CCCccccCC--------------C--CCCCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---R-PALTKGYLF--------------P--LDKKPAR 110 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~---~-~~l~~~~~~--------------~--~~~~~~~ 110 (489)
++||+|||||+||++||.+|++.|. +|+|||++. .+.. . +.-++.++. . ......+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~-~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQ---KVTIVEKGN-LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTID 78 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCC-CCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 5799999999999999999999976 799999973 2100 0 000000000 0 0000000
Q ss_pred CCCCcccc---CCCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC-eEEeeCcEEecCCCCCCCCCCCCCCCCC
Q 011267 111 LPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLP 186 (489)
Q Consensus 111 ~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g-~~i~yd~lvlATG~~~~~~p~~~g~~~~ 186 (489)
+..+.... .........+++++.+++++.++. ..++.....+.+.+| .++.||+||+|||+.|.. |..++.+..
T Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~-~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~-~~~~g~~~~ 156 (455)
T 1ebd_A 79 FAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEA-YFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIE-LPNFKFSNR 156 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEE-EEEETTEEEEEETTEEEEEECSEEEECCCEEECC-BTTBCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEE-EEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC-CCCCCccce
Confidence 00000000 000000012455677999998754 457776667777777 689999999999998864 444443221
Q ss_pred ceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEE
Q 011267 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 266 (489)
Q Consensus 187 gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~ 266 (489)
+.+..+ .......+++++|||+|++|+|+|..|+++|.+|+++++.+++++. +++++.+.+.+.+++.||++
T Consensus 157 ----v~~~~~---~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i 228 (455)
T 1ebd_A 157 ----ILDSTG---ALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKKKGVEV 228 (455)
T ss_dssp ----EECHHH---HHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTTCEE
T ss_pred ----EecHHH---HhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEE
Confidence 223333 3332235799999999999999999999999999999999999884 89999999999999999999
Q ss_pred EEcCceEEEEEeCCCCcEEEEEeC---CCcEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCCCCeEE
Q 011267 267 VKVGASIKNLEAGSDGRVAAVKLE---DGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFA 340 (489)
Q Consensus 267 ~~~~~~v~~i~~~~~~~v~~v~~~---~g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya 340 (489)
++ +++|++++.+++ .+ .+.+. +++++++|.||+|+|++|++++ ++.+|++.+ +|+|.||+++||+.|+|||
T Consensus 229 ~~-~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya 305 (455)
T 1ebd_A 229 VT-NALAKGAEERED-GV-TVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFA 305 (455)
T ss_dssp EE-SEEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred Ee-CCEEEEEEEeCC-eE-EEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCEEE
Confidence 99 999999985432 22 35543 4568999999999999999987 788899876 4679999999999999999
Q ss_pred eccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCC--CcCCceeeecccccCCCcceeeeeecCCcC-----
Q 011267 341 IGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTY--DYLPYFYSRVFEYEGSPRKVWWQFFGDNVG----- 413 (489)
Q Consensus 341 ~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~----- 413 (489)
+|||+..+. .+..|..+|+.+|.||++. ..++ ..+|+ ...++.. +..+|....
T Consensus 306 ~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~~a~~~ 365 (455)
T 1ebd_A 306 IGDIVPGPA----------LAHKASYEGKVAAEAIAGH-PSAVDYVAIPA--VVFSDPE-------CASVGYFEQQAKDE 365 (455)
T ss_dssp CGGGSSSCC----------CHHHHHHHHHHHHHHHTSC-CCCCCCSCCCE--EECSSSC-------EEEEECCHHHHHTT
T ss_pred EeccCCCcc----------cHHHHHHHHHHHHHHHcCC-CccCCCCCCCE--EEECCCc-------eEEEeCCHHHHHhc
Confidence 999997432 4456899999999999964 3343 33453 3333221 344554321
Q ss_pred --cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhH-HHHHHHhcCCCCC--hhhhcCCCcHHH
Q 011267 414 --ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD--KAKLQQASSVEE 474 (489)
Q Consensus 414 --~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~e 474 (489)
+... . ......+.+++++ +++|+|+++++..+.++. .+..+|+++.+++ ...++.|||++|
T Consensus 366 g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e 445 (455)
T 1ebd_A 366 GIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGE 445 (455)
T ss_dssp TCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTH
T ss_pred CCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHH
Confidence 1111 0 0112457787776 699999998766666654 4456788888886 344688999999
Q ss_pred HHHHHHccC
Q 011267 475 ALEIARAAL 483 (489)
Q Consensus 475 ~~~~~~~~~ 483 (489)
++..|++++
T Consensus 446 ~~~~~~~~~ 454 (455)
T 1ebd_A 446 IAMEAAEVA 454 (455)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998754
No 27
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.3e-41 Score=351.72 Aligned_cols=399 Identities=17% Similarity=0.230 Sum_probs=273.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---CCCC-ccccC----------------CCCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPAL-TKGYL----------------FPLDKKPA 109 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~---~~~l-~~~~~----------------~~~~~~~~ 109 (489)
.++||+|||||+||++||.+|++.|. +|+|||+++..... ..-. ++.++ ........
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~ 81 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGL---KVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPEL 81 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCcc
Confidence 35899999999999999999999886 69999997553210 0000 00000 00000000
Q ss_pred CCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC------------eEEeeCcEEecCCCCC
Q 011267 110 RLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG------------KLLKYGSLIVATGCTA 174 (489)
Q Consensus 110 ~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g------------~~i~yd~lvlATG~~~ 174 (489)
++........ .........++++.+++++.++.+ .++.....+.+.+| .++.||+||+|||+.|
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p 160 (482)
T 1ojt_A 82 DIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQ-FLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRV 160 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEE-EEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEE-EccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCC
Confidence 0000000000 000000123456789999987544 35553334444455 6799999999999998
Q ss_pred CCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHH
Q 011267 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (489)
Q Consensus 175 ~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~ 254 (489)
..++..+. + ..+. +..+ +......+++++|||+|++|+|+|..|.++|.+|+++++.+++++. +++++.+.
T Consensus 161 ~~~~~i~~-~-~~v~---~~~~---~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~ 231 (482)
T 1ojt_A 161 TKLPFIPE-D-PRII---DSSG---ALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-ADRDLVKV 231 (482)
T ss_dssp CCCSSCCC-C-TTEE---CHHH---HTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHH
T ss_pred CCCCCCCc-c-CcEE---cHHH---HhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-cCHHHHHH
Confidence 75442332 1 1222 3333 2222235799999999999999999999999999999999999984 89999999
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCC----CcEEEcCEEEEccCCCCCCch--hhhcCCeecC-CcEEe
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLED----GSTIDADTIVIGIGAKPTVSP--FERVGLNSSV-GGIQV 327 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~----g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~~-g~i~v 327 (489)
+.+.+++.||++++ +++|++++.+++ . ..+++.+ |+++++|.||+|+|++|++++ ++.+|++.++ |+|.|
T Consensus 232 l~~~l~~~gV~i~~-~~~v~~i~~~~~-~-~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~v 308 (482)
T 1ojt_A 232 WQKQNEYRFDNIMV-NTKTVAVEPKED-G-VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEV 308 (482)
T ss_dssp HHHHHGGGEEEEEC-SCEEEEEEEETT-E-EEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCC
T ss_pred HHHHHHhcCCEEEE-CCEEEEEEEcCC-e-EEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEee
Confidence 99999999999999 999999985432 2 3567766 778999999999999999987 6889998874 66999
Q ss_pred CCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCcCCceeeecccccCCCcceee
Q 011267 328 DGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWW 405 (489)
Q Consensus 328 d~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~ 405 (489)
|+++||+.|+|||+|||+..+. .+..|..+|+.+|.||++. ..+ +..+|+ ...++.+ +
T Consensus 309 d~~~~t~~~~IyA~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~--~~~~~~~-------~ 368 (482)
T 1ojt_A 309 DKQMRTNVPHIYAIGDIVGQPM----------LAHKAVHEGHVAAENCAGH-KAYFDARVIPG--VAYTSPE-------V 368 (482)
T ss_dssp CTTSBCSSTTEEECGGGTCSSC----------CHHHHHHHHHHHHHHHTTC-CCCCCCCCCCE--EECSSSC-------E
T ss_pred CCCcccCCCCEEEEEcccCCCc----------cHHHHHHHHHHHHHHHcCC-CccCCCCCCCE--EEEcCCC-------e
Confidence 9999999999999999997432 4556999999999999963 333 334454 2222221 4
Q ss_pred eeecCCcC-------cEEE--E----------ccCCCcEEEEEE--ECCEEEEEEeccCCHHHhHH-HHHHHhcCCCCC-
Q 011267 406 QFFGDNVG-------ETIE--I----------GNFDPKIATFWI--DSGKLKGVLVESGSPEEFQL-LPTLARSQPFVD- 462 (489)
Q Consensus 406 ~~~G~~~~-------~~~~--~----------~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~- 462 (489)
..+|.... +... . ......+.++++ ++++|+|+++++..+.++.. +..+|..+.+++
T Consensus 369 a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~ 448 (482)
T 1ojt_A 369 AWVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAAD 448 (482)
T ss_dssp EEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHH
T ss_pred EEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHH
Confidence 45554321 1111 1 011235778877 46999999987666666554 456678888876
Q ss_pred h-hhhcCCCcHHHHHHHHHccCC
Q 011267 463 K-AKLQQASSVEEALEIARAALP 484 (489)
Q Consensus 463 ~-~~~~~~~~~~e~~~~~~~~~~ 484 (489)
. ..++.|||+.|++..|++++.
T Consensus 449 l~~~~~~~Pt~~e~~~~a~~~~~ 471 (482)
T 1ojt_A 449 IGKTIHPHPTLGESIGMAAEVAL 471 (482)
T ss_dssp HHTSCCCSSSSTTHHHHHHHHHH
T ss_pred HhcCccCCCCHHHHHHHHHHHHh
Confidence 2 346889999999999987543
No 28
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=9.4e-42 Score=351.26 Aligned_cols=398 Identities=20% Similarity=0.240 Sum_probs=274.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---C-CCCccccCCC-----C---CCCCCCCC-----C
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---R-PALTKGYLFP-----L---DKKPARLP-----G 113 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~---~-~~l~~~~~~~-----~---~~~~~~~~-----~ 113 (489)
++||+|||||+||++||..|++.|. +|+|||++. .+-. . ..-++.++.. . ......++ .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGL---STAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFD 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccC
Confidence 5799999999999999999999986 799999973 2100 0 0000000000 0 00000000 0
Q ss_pred CccccC------CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC--eEEeeCcEEecCCCCCCCCCCCCCCCC
Q 011267 114 FHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYL 185 (489)
Q Consensus 114 ~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~i~yd~lvlATG~~~~~~p~~~g~~~ 185 (489)
+..... ........+++++.+++++.++.+ .++....++.+.+| .++.||+||+|||+.|.. |..++.+.
T Consensus 79 ~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~-~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~-~~~~g~~~ 156 (464)
T 2a8x_A 79 YGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGT-FADANTLLVDLNDGGTESVTFDNAIIATGSSTRL-VPGTSLSA 156 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEE-ESSSSEEEEEETTSCCEEEEEEEEEECCCEEECC-CTTCCCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-EecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCCCCc
Confidence 000000 000000134556789999987544 35554456666777 689999999999998864 44444322
Q ss_pred CceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcE
Q 011267 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (489)
Q Consensus 186 ~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~ 265 (489)
. +.+..+ .......+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.+.+++.||+
T Consensus 157 ~----~~~~~~---~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gv~ 228 (464)
T 2a8x_A 157 N----VVTYEE---QILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-NEDADVSKEIEKQFKKLGVT 228 (464)
T ss_dssp T----EECHHH---HHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHTCE
T ss_pred e----EEecHH---HhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHcCCE
Confidence 2 223333 333223579999999999999999999999999999999999998 48999999999999999999
Q ss_pred EEEcCceEEEEEeCCCCcEEEEEeC-CC--cEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCCCCeE
Q 011267 266 FVKVGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIF 339 (489)
Q Consensus 266 ~~~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iy 339 (489)
+++ +++|++++.+++ .+ .+.+. +| +++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.|+||
T Consensus 229 i~~-~~~v~~i~~~~~-~~-~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~Iy 305 (464)
T 2a8x_A 229 ILT-ATKVESIADGGS-QV-TVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVGHIY 305 (464)
T ss_dssp EEC-SCEEEEEEECSS-CE-EEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSSTTEE
T ss_pred EEe-CcEEEEEEEcCC-eE-EEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCCCEE
Confidence 999 999999985433 33 45554 56 67999999999999999988 788899886 477999999999999999
Q ss_pred EeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC---CCcCCceeeecccccCCCcceeeeeecCCcC---
Q 011267 340 AIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT---YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG--- 413 (489)
Q Consensus 340 a~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~--- 413 (489)
|+|||+..+. .+..|..+|+.+|.||++....+ |..+|++ ..++.. +..+|....
T Consensus 306 A~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~--~~~~~~-------~a~vG~~e~~a~ 366 (464)
T 2a8x_A 306 AIGDVNGLLQ----------LAHVAEAQGVVAAETIAGAETLTLGDHRMLPRA--TFCQPN-------VASFGLTEQQAR 366 (464)
T ss_dssp ECGGGGCSSC----------SHHHHHHHHHHHHHHHHTCCCCCCCCGGGSCEE--ECSSSE-------EEEEECCHHHHH
T ss_pred EeECcCCCcc----------CHHHHHHHHHHHHHHhcCCCCcccCCCCCCCEE--EECCCC-------eEEEcCCHHHHH
Confidence 9999997432 45569999999999999623333 4445643 222221 445554321
Q ss_pred ----cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhH-HHHHHHhcCCCCC-h-hhhcCCCcH
Q 011267 414 ----ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD-K-AKLQQASSV 472 (489)
Q Consensus 414 ----~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~ 472 (489)
+... . ......+.+++++ +++|+|+++++..+.++. .+..+++++.+++ . ..++.|||+
T Consensus 367 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~ 446 (464)
T 2a8x_A 367 NEGYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTM 446 (464)
T ss_dssp HTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCT
T ss_pred hcCCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCCh
Confidence 1111 0 0112457788775 699999998766665544 4566788888875 2 345889999
Q ss_pred HHHHHHHHccCC
Q 011267 473 EEALEIARAALP 484 (489)
Q Consensus 473 ~e~~~~~~~~~~ 484 (489)
.|++..|++++.
T Consensus 447 ~e~~~~~~~~~~ 458 (464)
T 2a8x_A 447 SEALQECFHGLV 458 (464)
T ss_dssp THHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999986543
No 29
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.5e-41 Score=348.87 Aligned_cols=401 Identities=19% Similarity=0.271 Sum_probs=277.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC----CccccC-----------------CCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA----LTKGYL-----------------FPLDKK 107 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~----l~~~~~-----------------~~~~~~ 107 (489)
+.++||+|||||+||++||.+|++.|. +|+|||+++........ -++.++ ......
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGF---KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNV 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTC---CEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 356899999999999999999999986 79999998654221000 000000 000000
Q ss_pred CCCCCCCcccc---CCCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC--eEEeeCcEEecCCCCCCCCCCCCC
Q 011267 108 PARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIG 182 (489)
Q Consensus 108 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~i~yd~lvlATG~~~~~~p~~~g 182 (489)
..++..+.... ..........++++.+++++.+..+ .++.....+.+.+| .++.||+||+|||+.|.. |..+|
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~-p~~~g 158 (470)
T 1dxl_A 81 EIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGK-FVSPSEISVDTIEGENTVVKGKHIIIATGSDVKS-LPGVT 158 (470)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-EEETTEEEECCSSSCCEEEECSEEEECCCEEECC-BTTBC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-EecCCEEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCC
Confidence 00000000000 0000000123556679999998654 47765556666677 789999999999998864 44455
Q ss_pred CCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhc
Q 011267 183 GYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN 262 (489)
Q Consensus 183 ~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~ 262 (489)
.+.+++.+ .. .+......+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.+.+++.
T Consensus 159 ~~~~~v~~---~~---~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-~~~~~~~~~l~~~l~~~ 231 (470)
T 1dxl_A 159 IDEKKIVS---ST---GALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-TMDAEIRKQFQRSLEKQ 231 (470)
T ss_dssp CCSSSEEC---HH---HHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHS
T ss_pred CCcccEEe---HH---HhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-cccHHHHHHHHHHHHHc
Confidence 43333332 22 2222223579999999999999999999999999999999999998 58999999999999999
Q ss_pred CcEEEEcCceEEEEEeCCCCcEEEEEeC---CC--cEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCC
Q 011267 263 GVKFVKVGASIKNLEAGSDGRVAAVKLE---DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTR 334 (489)
Q Consensus 263 Gv~~~~~~~~v~~i~~~~~~~v~~v~~~---~g--~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~ 334 (489)
||++++ +++|+++..+++ .+ .+.+. +| +++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+
T Consensus 232 gv~i~~-~~~v~~i~~~~~-~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~ 308 (470)
T 1dxl_A 232 GMKFKL-KTKVVGVDTSGD-GV-KLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFSTN 308 (470)
T ss_dssp SCCEEC-SEEEEEEECSSS-SE-EEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBCS
T ss_pred CCEEEe-CCEEEEEEEcCC-eE-EEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCccC
Confidence 999999 999999985433 33 35553 44 67999999999999999988 788899886 4679999999999
Q ss_pred CCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCC--CcCCceeeecccccCCCcceeeeeecCCc
Q 011267 335 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTY--DYLPYFYSRVFEYEGSPRKVWWQFFGDNV 412 (489)
Q Consensus 335 ~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~G~~~ 412 (489)
.|+|||+|||+..+. .+..|..+|+.+|.||++. ..++ ..+|+ ...++.. +..+|...
T Consensus 309 ~~~Iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~--~~~~~~~-------~a~vG~~e 368 (470)
T 1dxl_A 309 VSGVYAIGDVIPGPM----------LAHKAEEDGVACVEYLAGK-VGHVDYDKVPG--VVYTNPE-------VASVGKTE 368 (470)
T ss_dssp STTEEECSTTSSSCC----------CHHHHHHHHHHHHHHHTTS-CCCCCTTSCCE--EECSSSE-------EEEEECCH
T ss_pred CCCEEEEeccCCCCc----------cHHHHHHHHHHHHHHHcCC-CcCCCCCCCCE--EEECCCc-------eEEEcCCH
Confidence 999999999997432 4556999999999999964 3343 33453 3333221 44555432
Q ss_pred C-------cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhH-HHHHHHhcCCCCC-h-hhhcC
Q 011267 413 G-------ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD-K-AKLQQ 468 (489)
Q Consensus 413 ~-------~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~ 468 (489)
. +... . ......+.+++++ +++|+|+++++..+.++. .+..++.++.+++ . ..++.
T Consensus 369 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~ 448 (470)
T 1dxl_A 369 EQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHA 448 (470)
T ss_dssp HHHHHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCC
T ss_pred HHHHhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccC
Confidence 1 1111 0 0112457788776 699999998777766654 4466788888876 2 34588
Q ss_pred CCcHHHHHHHHHccCC
Q 011267 469 ASSVEEALEIARAALP 484 (489)
Q Consensus 469 ~~~~~e~~~~~~~~~~ 484 (489)
|||+.|++..|++++.
T Consensus 449 ~Pt~~e~~~~~~~~~~ 464 (470)
T 1dxl_A 449 HPTMSEAIKEAAMATY 464 (470)
T ss_dssp SSCTTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHh
Confidence 9999999999987644
No 30
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.9e-41 Score=350.45 Aligned_cols=402 Identities=19% Similarity=0.264 Sum_probs=275.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC----CCCccccCCC-----CCCCCCCCCCCccccC-
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER----PALTKGYLFP-----LDKKPARLPGFHTCVG- 119 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~----~~l~~~~~~~-----~~~~~~~~~~~~~~~~- 119 (489)
.++||+|||||+||+++|..|++.|. +|+|||+++..+... +.-++.++.. .-.......+......
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~ 80 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGF---NTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDI 80 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 35799999999999999999999986 799999965432100 0000000000 0000000000000000
Q ss_pred -CCC--------------CCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC--eE------EeeCcEEecCCCCCCC
Q 011267 120 -SGG--------------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KL------LKYGSLIVATGCTASR 176 (489)
Q Consensus 120 -~~~--------------~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~------i~yd~lvlATG~~~~~ 176 (489)
.+. ......++++.+++++.++.+. .+....+|.+.+| .+ +.||+||+|||+.|..
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~ 159 (478)
T 1v59_A 81 KINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTP 159 (478)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCC
Confidence 000 0001235667899999876544 3443345566666 56 9999999999998753
Q ss_pred CCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHH
Q 011267 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256 (489)
Q Consensus 177 ~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~ 256 (489)
+| +...++ ..+.+..++ ......+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.
T Consensus 160 ~~---g~~~~~-~~v~~~~~~---~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~ 231 (478)
T 1v59_A 160 FP---GIEIDE-EKIVSSTGA---LSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-SMDGEVAKATQ 231 (478)
T ss_dssp CT---TCCCCS-SSEECHHHH---TTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-SSCHHHHHHHH
T ss_pred CC---CCCCCC-ceEEcHHHH---HhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-ccCHHHHHHHH
Confidence 33 332333 122333333 22223479999999999999999999999999999999999998 58999999999
Q ss_pred HHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC-----CCcEEEcCEEEEccCCCCCCc--hhhhcCCeec-CCcEEeC
Q 011267 257 QLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE-----DGSTIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVD 328 (489)
Q Consensus 257 ~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~-----~g~~i~aD~vi~a~G~~p~~~--~~~~~gl~~~-~g~i~vd 328 (489)
+.+++.||++++ +++|+++...+++....+.+. +++++++|.||+|+|++|+++ +++++|++.+ +|+|.||
T Consensus 232 ~~l~~~gv~i~~-~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd 310 (478)
T 1v59_A 232 KFLKKQGLDFKL-STKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVID 310 (478)
T ss_dssp HHHHHTTCEEEC-SEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCC
T ss_pred HHHHHCCCEEEe-CCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeEC
Confidence 999999999999 999999985212333456665 456899999999999999998 7899999886 5679999
Q ss_pred CCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCcCCceeeecccccCCCcceeeee
Q 011267 329 GQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQF 407 (489)
Q Consensus 329 ~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~ 407 (489)
+++||+.|+|||+|||+..+. .+..|..+|+.+|.||++... ..|..+|++|..... +..
T Consensus 311 ~~~~t~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~---------~a~ 371 (478)
T 1v59_A 311 DQFNSKFPHIKVVGDVTFGPM----------LAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPE---------VAW 371 (478)
T ss_dssp TTSBCSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSE---------EEE
T ss_pred cCCccCCCCEEEeeccCCCcc----------cHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCc---------EEE
Confidence 999999999999999997532 445699999999999997432 346667876643322 334
Q ss_pred ecCCcC-------cEEE-------------EccCCCcEEEEEEE--CCEEEEEEeccCCHHH-hHHHHHHHhcCCCCC-h
Q 011267 408 FGDNVG-------ETIE-------------IGNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVD-K 463 (489)
Q Consensus 408 ~G~~~~-------~~~~-------------~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~-~ 463 (489)
+|.... +... .++ ...+.+++++ +++|+|++++...+.+ +..+..+|.++.+++ .
T Consensus 372 vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l 450 (478)
T 1v59_A 372 VGKTEEQLKEAGIDYKIGKFPFAANSRAKTNQD-TEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDV 450 (478)
T ss_dssp EECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTC-CCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHH
T ss_pred EECCHHHHHHcCCCEEEEEEecccchhhhhcCC-CcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHH
Confidence 554321 1111 111 2346666665 6999999986666555 556677888998874 3
Q ss_pred -hhhcCCCcHHHHHHHHHccCC
Q 011267 464 -AKLQQASSVEEALEIARAALP 484 (489)
Q Consensus 464 -~~~~~~~~~~e~~~~~~~~~~ 484 (489)
...+.||++.|++..++.++.
T Consensus 451 ~~~~~~~Pt~~e~~~~~~~~~~ 472 (478)
T 1v59_A 451 ARVCHAHPTLSEAFKEANMAAY 472 (478)
T ss_dssp HTSCCCTTCTTHHHHHHHHHHH
T ss_pred hhCCCCCCCHHHHHHHHHHHHh
Confidence 335788999999999986543
No 31
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.9e-42 Score=356.16 Aligned_cols=401 Identities=17% Similarity=0.231 Sum_probs=262.9
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC--CCC---CC--C------c------cccCCCCCCCCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--YER---PA--L------T------KGYLFPLDKKPARL 111 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~--y~~---~~--l------~------~~~~~~~~~~~~~~ 111 (489)
++||||||||+||++||.+|++.|. +|+|||+++... .++ |. + . ..+-.... ...++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~ 77 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNA---KVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK-FSFNL 77 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC-CccCH
Confidence 4799999999999999999999876 799999985210 000 00 0 0 00000000 00000
Q ss_pred CCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCC-------------CeEEeeCcEEecCCCCCC
Q 011267 112 PGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-------------GKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 112 ~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~-------------g~~i~yd~lvlATG~~~~ 175 (489)
+.+..... .........++++.+++++.+. +..++. +.+.+.+ +.++.||+||+|||+.|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~ 154 (500)
T 1onf_A 78 PLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPV 154 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC----------------------------CBSSEEECCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCC
Confidence 00000000 0000001234467899999874 444554 4455533 667999999999999987
Q ss_pred CCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHH
Q 011267 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRY 255 (489)
Q Consensus 176 ~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l 255 (489)
.|.++|. +.+.+ .+.+... ..+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+
T Consensus 155 -~p~i~G~--~~~~~------~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l 223 (500)
T 1onf_A 155 -FPPVKGI--ENTIS------SDEFFNI-KESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-KFDESVINVL 223 (500)
T ss_dssp -CCSCTTG--GGCEE------HHHHTTC-CCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-TSCHHHHHHH
T ss_pred -CCCCCCC--CcccC------HHHHhcc-CCCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-ccchhhHHHH
Confidence 4544442 12221 2233222 2288999999999999999999999999999999999997 5899999999
Q ss_pred HHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcE-EEcCEEEEccCCCCCCc-h-hhhcCCeecCCcEEeCCCCC
Q 011267 256 EQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPTVS-P-FERVGLNSSVGGIQVDGQFR 332 (489)
Q Consensus 256 ~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~-i~aD~vi~a~G~~p~~~-~-~~~~gl~~~~g~i~vd~~~~ 332 (489)
.+.+++.||++++ ++.|++++.++++. ..+.+++|++ +++|.||+|+|++|+++ + ++.+|++.++|+|.||+++|
T Consensus 224 ~~~l~~~gv~i~~-~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~~~ 301 (500)
T 1onf_A 224 ENDMKKNNINIVT-FADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDENQR 301 (500)
T ss_dssp HHHHHHTTCEEEC-SCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTTCB
T ss_pred HHHHHhCCCEEEE-CCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCCcc
Confidence 9999999999999 99999998654443 3678889988 99999999999999986 4 68889988667799999999
Q ss_pred CCCCCeEEeccccccCCcc-----------------------CC-cccccccHHHHHHHHHHHHHHHhcCCCC--CCCcC
Q 011267 333 TRMPGIFAIGDVAAFPLKM-----------------------YD-RTARVEHVDHARQSAQHCIKALLSAQTH--TYDYL 386 (489)
Q Consensus 333 t~~~~Iya~GD~a~~~~~~-----------------------~~-~~~~~~~~~~A~~~g~~~a~~l~~~~~~--~~~~~ 386 (489)
|+.|+|||+|||+..+... .+ ...+...+..|..+|+.+|.||++.... .|..+
T Consensus 302 t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~ 381 (500)
T 1onf_A 302 TSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKTRKTNYKLI 381 (500)
T ss_dssp CSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTTCCCCCSSC
T ss_pred cCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCCccCCCCCC
Confidence 9999999999999532100 00 0023457888999999999999974332 35555
Q ss_pred CceeeecccccCCCcceeeeeecCCcC---------cEEE----------------EccCCCcEEEEEEE--CCEEEEEE
Q 011267 387 PYFYSRVFEYEGSPRKVWWQFFGDNVG---------ETIE----------------IGNFDPKIATFWID--SGKLKGVL 439 (489)
Q Consensus 387 p~~~~~~~~~~~~~~~~~~~~~G~~~~---------~~~~----------------~~~~~~~~~~~~~~--~~~~~g~~ 439 (489)
|+. ..++.+ +..+|.... .... .......+.++.++ +++|+|++
T Consensus 382 p~~--~~~~~~-------~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~ 452 (500)
T 1onf_A 382 PTV--IFSHPP-------IGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLH 452 (500)
T ss_dssp CEE--ECCSSC-------EEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEE
T ss_pred CeE--EEcCcc-------eEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEE
Confidence 542 211111 334443211 1111 01112346677664 59999999
Q ss_pred eccCCHHHhHHH-HHHHhcCCCCC-h-hhhcCCCcHHHHHHHHH
Q 011267 440 VESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEALEIAR 480 (489)
Q Consensus 440 ~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~e~~~~~~ 480 (489)
+++.++.++... ..+++.+.+++ . ..+..|||+.|++..++
T Consensus 453 ~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~ 496 (500)
T 1onf_A 453 IIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLTLQ 496 (500)
T ss_dssp EESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTTHHHHCC
T ss_pred EECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHhc
Confidence 876667776655 45578888776 2 44688999999998764
No 32
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=9.4e-41 Score=343.77 Aligned_cols=400 Identities=16% Similarity=0.161 Sum_probs=278.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC----CCCccccC-----------CCCCCCCCCCCCCc
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER----PALTKGYL-----------FPLDKKPARLPGFH 115 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~----~~l~~~~~-----------~~~~~~~~~~~~~~ 115 (489)
++||+|||||+||++||..|++.|. +|+|||+++...... +.-++.++ ........++....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~---~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKY---NVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQ 80 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHH
Confidence 5899999999999999999999987 799999776543110 00000000 00000000100000
Q ss_pred cccCC--CCC--CCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeE--EeeCcEEecCCCCCCCCCCCCCCCCCceE
Q 011267 116 TCVGS--GGE--RQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL--LKYGSLIVATGCTASRFPEKIGGYLPGVH 189 (489)
Q Consensus 116 ~~~~~--~~~--~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~--i~yd~lvlATG~~~~~~p~~~g~~~~gv~ 189 (489)
..... ... .....++++.+++++.+ ++..++.....|.+.+|++ +.||+||+|||+.|. .|..+|.+ +
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~--~-- 154 (466)
T 3l8k_A 81 DRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA-KLRLPGVE--Y-- 154 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC-CCCCTTGG--G--
T ss_pred HHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCcc-CCCCCCcc--c--
Confidence 00000 000 01122334568999986 7889998888888888888 999999999999886 45444532 2
Q ss_pred eecCHHHHHHHH-HhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEE
Q 011267 190 YIRDVADADALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 268 (489)
Q Consensus 190 ~~~~~~~~~~~~-~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~ 268 (489)
+.+..+...+. .....+++++|||+|++|+|+|..|.++|.+|+++++.+++++..+++++.+.+.+.++ |++++
T Consensus 155 -~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~ 230 (466)
T 3l8k_A 155 -CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKF 230 (466)
T ss_dssp -SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEEC
T ss_pred -eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEE
Confidence 33333333222 22235789999999999999999999999999999999999986449999999988876 99999
Q ss_pred cCceEEEEEeCCCCcEEEEEeC--CCc--EEEcCEEEEccCCCCCCch-hhhcCCeecCCcEEeCCCCCCCCCCeEEecc
Q 011267 269 VGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPTVSP-FERVGLNSSVGGIQVDGQFRTRMPGIFAIGD 343 (489)
Q Consensus 269 ~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~aD~vi~a~G~~p~~~~-~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD 343 (489)
++.|+++...+++.+ .+.++ +|+ ++++|.||+|+|++|++++ ++.+|++.+++||.||+++||++|+|||+||
T Consensus 231 -~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~Gi~vd~~~~t~~~~Iya~GD 308 (466)
T 3l8k_A 231 -NSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTGIVVDETMKTNIPNVFATGD 308 (466)
T ss_dssp -SCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSSBCCCTTCBCSSTTEEECGG
T ss_pred -CCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCCEeECCCccCCCCCEEEEEe
Confidence 999999986432444 47776 666 7999999999999999986 7889998874349999999999999999999
Q ss_pred ccccCCccCCcccccccHHHHHHHHHHHHHHHhcC--CCC--CCCcCCceeeecccccCCCcceeeeeecCCcCc-----
Q 011267 344 VAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA--QTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE----- 414 (489)
Q Consensus 344 ~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~--~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~~----- 414 (489)
|+..+. .+..|..+|+.+|.||++. ... .+..+|+ ....+.. +..+|....+
T Consensus 309 ~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~--~~~~~~~-------~a~vG~te~~a~~~g 369 (466)
T 3l8k_A 309 ANGLAP----------YYHAAVRMSIAAANNIMANGMPVDYVDVKSIPV--TIYTIPS-------LSYVGILPSKARKMG 369 (466)
T ss_dssp GTCSCC----------SHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCE--EECSSSC-------EEEEECCHHHHHHHT
T ss_pred cCCCCc----------cHhHHHHHHHHHHHHHhCCCCCccccCCCCCcE--EEECCCC-------eEEecCCHHHHHhCC
Confidence 997532 4566999999999999975 332 3344443 3222222 4556654321
Q ss_pred --E--EEEc----------cCCCcEEEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-hhhcCCCcHHHH
Q 011267 415 --T--IEIG----------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEA 475 (489)
Q Consensus 415 --~--~~~~----------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~e~ 475 (489)
. .... .....+.++.++ +++|+|+++++.++.++... ..+|+.+.+++ . ..++.|||+.|+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~ 449 (466)
T 3l8k_A 370 IEIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEI 449 (466)
T ss_dssp CCEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHH
T ss_pred CCEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHH
Confidence 1 1110 012346777665 49999999877777776554 55678888886 3 446889999999
Q ss_pred HHHHHccCC
Q 011267 476 LEIARAALP 484 (489)
Q Consensus 476 ~~~~~~~~~ 484 (489)
+..+++++.
T Consensus 450 ~~~~~~~~~ 458 (466)
T 3l8k_A 450 ISYTARKVI 458 (466)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987653
No 33
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1.4e-40 Score=342.07 Aligned_cols=396 Identities=20% Similarity=0.265 Sum_probs=273.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC---CCCCC-ccccC--------------CCC-CCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY---ERPAL-TKGYL--------------FPL-DKKPAR 110 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y---~~~~l-~~~~~--------------~~~-~~~~~~ 110 (489)
+++||||||||+||++||.+|++.|. +|+|||+++. +. +..-. ++.++ +.. .....+
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~g~---~V~lie~~~~-GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 80 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQLGL---KVLAVEAGEV-GGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELD 80 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT-THHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEEC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCCC-CCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcC
Confidence 35899999999999999999999876 7999999862 10 00000 00000 000 000000
Q ss_pred CCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCc
Q 011267 111 LPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG 187 (489)
Q Consensus 111 ~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~g 187 (489)
+..+..... .........++++.+++++.+. +..++. +++.+. |.++.||+||+|||++|..+|..++. ..
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~~~--~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~--~~ 154 (464)
T 2eq6_A 81 LKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGF-ARLVGP--KEVEVG-GERYGAKSLILATGSEPLELKGFPFG--ED 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEET--TEEEET-TEEEEEEEEEECCCEEECCBTTBCCS--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-EEEccC--CEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCC--Cc
Confidence 000000000 0000001235667899999875 444654 577776 77899999999999998744323331 12
Q ss_pred eEeecCHHHHHHHHHhhc-CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEE
Q 011267 188 VHYIRDVADADALISSLE-KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 266 (489)
Q Consensus 188 v~~~~~~~~~~~~~~~~~-~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~ 266 (489)
+. +..+. ..... .+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.||++
T Consensus 155 v~---~~~~~---~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~gV~i 227 (464)
T 2eq6_A 155 VW---DSTRA---LKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-QGDPETAALLRRALEKEGIRV 227 (464)
T ss_dssp EE---CHHHH---TCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEE
T ss_pred EE---cHHHH---HhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHhcCCEE
Confidence 22 33333 22222 579999999999999999999999999999999999988 489999999999999999999
Q ss_pred EEcCceEEEEEeCCCCcEEEEEeC-C--Cc--EEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCCCCe
Q 011267 267 VKVGASIKNLEAGSDGRVAAVKLE-D--GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGI 338 (489)
Q Consensus 267 ~~~~~~v~~i~~~~~~~v~~v~~~-~--g~--~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~I 338 (489)
++ +++|++++.++ +.+ .+.+. + |+ ++++|.||+|+|++|++++ ++.+|++.+ +|+|.||+++||+.|+|
T Consensus 228 ~~-~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~I 304 (464)
T 2eq6_A 228 RT-KTKAVGYEKKK-DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGV 304 (464)
T ss_dssp EC-SEEEEEEEEET-TEE-EEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred Ec-CCEEEEEEEeC-CEE-EEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCE
Confidence 99 99999998543 333 46665 6 76 8999999999999999986 688898875 56799999999999999
Q ss_pred EEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCcCCceeeecccccCCCcceeeeeecCCcC----
Q 011267 339 FAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG---- 413 (489)
Q Consensus 339 ya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~---- 413 (489)
||+|||+..+. .+..|..+|+.+|.||++... ..+. +|++ ..++.. +..+|....
T Consensus 305 ya~GD~~~~~~----------l~~~A~~~g~~aa~~i~g~~~~~~~~-~p~~--~~~~~~-------~a~vG~~e~~a~~ 364 (464)
T 2eq6_A 305 YAIGDAARPPL----------LAHKAMREGLIAAENAAGKDSAFDYQ-VPSV--VYTSPE-------WAGVGLTEEEAKR 364 (464)
T ss_dssp EECGGGTCSSC----------CHHHHHHHHHHHHHHHTTCCCCCCCC-CCEE--ECSSSE-------EEEEECCHHHHHH
T ss_pred EEEeccCCCcc----------cHHHHHHHHHHHHHHhcCCCcccCCC-CCeE--EECCCC-------EEEEeCCHHHHHh
Confidence 99999997532 455699999999999996432 1344 5643 222211 445554321
Q ss_pred ---cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHh-HHHHHHHhcCCCCC--hhhhcCCCcHH
Q 011267 414 ---ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEF-QLLPTLARSQPFVD--KAKLQQASSVE 473 (489)
Q Consensus 414 ---~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~ 473 (489)
+... . ......+.+++++ +++|+|+++++..+.++ ..+..+++.+.+++ ...++.|||+.
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~ 444 (464)
T 2eq6_A 365 AGYKVKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLS 444 (464)
T ss_dssp TTCCEEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTT
T ss_pred cCCCEEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChH
Confidence 1111 0 0112457777776 69999999877777665 45566788888886 34468899999
Q ss_pred HHHHHHHccCCc
Q 011267 474 EALEIARAALPV 485 (489)
Q Consensus 474 e~~~~~~~~~~~ 485 (489)
|++..+++++..
T Consensus 445 e~~~~~~~~~~~ 456 (464)
T 2eq6_A 445 ESLMEAAEAFHK 456 (464)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 999999876543
No 34
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=8.7e-41 Score=346.01 Aligned_cols=317 Identities=19% Similarity=0.284 Sum_probs=238.7
Q ss_pred HHHC-CcEEEeCCcEEEEeCCCCEEEeC---C-----CeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHH
Q 011267 130 YKEK-GIEMIYQDPVTSIDIEKQTLITN---S-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL 200 (489)
Q Consensus 130 ~~~~-~i~~~~~~~V~~id~~~~~v~~~---~-----g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~ 200 (489)
+++. +++++.+ ++..++. ++|.+. + +.++.||+||||||++|.. |.++|. +.+. +.+.+
T Consensus 117 l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~~~~~~~~~~d~lViATGs~p~~-p~i~G~--~~~~------~~~~~ 184 (495)
T 2wpf_A 117 FNDTEGLDFFLG-WGSLESK--NVVVVRETADPKSAVKERLQADHILLATGSWPQM-PAIPGI--EHCI------SSNEA 184 (495)
T ss_dssp HHHCTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEECCCEEECC-CCCTTG--GGCE------EHHHH
T ss_pred HhcCCCeEEEEe-EEEEeeC--CEEEEeecCCccCCCCeEEEcCEEEEeCCCCcCC-CCCCCc--cccc------cHHHH
Confidence 4566 9999987 5777764 567765 4 6789999999999999874 544442 2222 22333
Q ss_pred HHhhcCCCcEEEECCCHHHHHHHHHHHhC---CCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEE
Q 011267 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277 (489)
Q Consensus 201 ~~~~~~~~~vvViG~G~~g~e~A~~l~~~---g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~ 277 (489)
......+++++|||+|++|+|+|..|.++ |.+|+++++.+++++. +++++.+.+.+.+++.||++++ ++.|+++.
T Consensus 185 ~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~-~~~v~~i~ 262 (495)
T 2wpf_A 185 FYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-FDETIREEVTKQLTANGIEIMT-NENPAKVS 262 (495)
T ss_dssp TTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-SCHHHHHHHHHHHHHTTCEEEE-SCCEEEEE
T ss_pred HhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhCCCEEEe-CCEEEEEE
Confidence 33334578999999999999999999999 9999999999999974 8999999999999999999999 99999998
Q ss_pred eCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCc
Q 011267 278 AGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354 (489)
Q Consensus 278 ~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~ 354 (489)
.++++. ..|.+.+|+++++|.||+|+|++|++++ ++.+|++.+ +|+|.||+++||+.|+|||+|||+..+
T Consensus 263 ~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~------ 335 (495)
T 2wpf_A 263 LNTDGS-KHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRL------ 335 (495)
T ss_dssp ECTTSC-EEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSC------
T ss_pred EcCCce-EEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc------
Confidence 653333 4688889989999999999999999974 688899886 577999999999999999999999632
Q ss_pred ccccccHHHHHHHHHHHHHHHhcCCC--CCCCcCCceeeecccccCCCcceeeeeecCCcCc-------EEE-E------
Q 011267 355 TARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I------ 418 (489)
Q Consensus 355 ~~~~~~~~~A~~~g~~~a~~l~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~~-------~~~-~------ 418 (489)
..+..|..+|+.+|.||++... ..|..+|+ ...++.+ +..+|....+ ..+ .
T Consensus 336 ----~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~~~-------~a~vGl~e~~a~~~~~~~~v~~~~~~~~ 402 (495)
T 2wpf_A 336 ----MLTPVAINEGAALVDTVFGNKPRKTDHTRVAS--AVFSIPP-------IGTCGLIEEVAAKEFEKVAVYMSSFTPL 402 (495)
T ss_dssp ----CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCEE--EECCSSC-------EEEEECCHHHHHHHSSEEEEEEEEECCT
T ss_pred ----cCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCE--EEECCCC-------eEEEeCCHHHHHhcCCCEEEEEEecCch
Confidence 2566799999999999997432 23444553 2222221 4556654221 111 1
Q ss_pred -----ccCCCcE-EEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-hhhcCCCcHHHHHHHHH
Q 011267 419 -----GNFDPKI-ATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEALEIAR 480 (489)
Q Consensus 419 -----~~~~~~~-~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~e~~~~~~ 480 (489)
......+ .++.++ +++|+|+++++.++.++... ..++..+.+++ . ..++.|||+.|++..++
T Consensus 403 ~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 475 (495)
T 2wpf_A 403 MHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMR 475 (495)
T ss_dssp HHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSCC
T ss_pred hhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHH
Confidence 1112347 777775 69999999877777775544 55678888876 2 44688999999988765
No 35
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.9e-41 Score=346.35 Aligned_cols=403 Identities=17% Similarity=0.258 Sum_probs=275.1
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------CC----------------CccccCCCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------PA----------------LTKGYLFPLD 105 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~------~~----------------l~~~~~~~~~ 105 (489)
.|+++||+|||||+||++||..|++.|. +|+|||+++...... |. +.. +-....
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~-~g~~~~ 97 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGM---KVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEA-LGVEVA 97 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGG-GTEECC
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhh-cCcccC
Confidence 3456899999999999999999999987 699999876532110 00 000 000000
Q ss_pred CCCCCCCCCcccc---CCCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC--eEEeeCcEEecCCCCCCCCCCC
Q 011267 106 KKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEK 180 (489)
Q Consensus 106 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~i~yd~lvlATG~~~~~~p~~ 180 (489)
....++....... ..........++++.+++++.+ ++..++.....+.+.+| .++.||+||||||+.|..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~i--- 173 (491)
T 3urh_A 98 NPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQG-TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGI--- 173 (491)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCB---
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCC---
Confidence 0000000000000 0000001123456779999986 55556666667777777 5799999999999986433
Q ss_pred CCCC--CCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHH
Q 011267 181 IGGY--LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQL 258 (489)
Q Consensus 181 ~g~~--~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~ 258 (489)
+|.. .++...+ +.+.+......+++++|||+|++|+|+|..|.++|.+|+++++.+++++. +++++.+.+.+.
T Consensus 174 pg~~~~~~~~~~~----~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~ 248 (491)
T 3urh_A 174 PGVEVAFDEKTIV----SSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQRM 248 (491)
T ss_dssp TTBCCCCCSSSEE----CHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHHH
T ss_pred CCcccccCCeeEE----ehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHHH
Confidence 3322 2222222 23333333456899999999999999999999999999999999999984 899999999999
Q ss_pred HHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCC---C--cEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCC
Q 011267 259 YQQNGVKFVKVGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQ 330 (489)
Q Consensus 259 l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~ 330 (489)
+++.||++++ +++|++++..++ .+ .+.+.+ | +++++|.||+|+|++|++++ ++.+|++.+ +|+|.||++
T Consensus 249 l~~~gV~v~~-~~~v~~i~~~~~-~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~ 325 (491)
T 3urh_A 249 LTKQGIDFKL-GAKVTGAVKSGD-GA-KVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRH 325 (491)
T ss_dssp HHHTTCEEEC-SEEEEEEEEETT-EE-EEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTT
T ss_pred HHhCCCEEEE-CCeEEEEEEeCC-EE-EEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCC
Confidence 9999999999 999999986433 22 355542 4 57999999999999999987 788899886 567999999
Q ss_pred CCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCcCCceeeecccccCCCcceeeeeec
Q 011267 331 FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFG 409 (489)
Q Consensus 331 ~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~G 409 (489)
+||+.|+|||+|||+..+. .+..|..+|+.+|.+|++... ..+..+|+ ...++.. +..+|
T Consensus 326 ~~t~~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~~~~p~-------~a~vG 386 (491)
T 3urh_A 326 FQTSIAGVYAIGDVVRGPM----------LAHKAEDEGVAVAEIIAGQAGHVNYDVIPG--VVYTQPE-------VASVG 386 (491)
T ss_dssp CBCSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHTTSCCCCCTTCCCE--EECSSSC-------EEEEE
T ss_pred CCCCCCCEEEEEecCCCcc----------chhHHHHHHHHHHHHHcCCCcccCCCCCCE--EEEccCC-------eEEEe
Confidence 9999999999999996442 456799999999999996432 12344554 3322221 44555
Q ss_pred CCcC-------cEE--EE--c--------cCCCcEEEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-hh
Q 011267 410 DNVG-------ETI--EI--G--------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AK 465 (489)
Q Consensus 410 ~~~~-------~~~--~~--~--------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~ 465 (489)
.... +.. .. . .....+.++.++ +++|+|+++++.++.++... ..+|..+.+++ . ..
T Consensus 387 lte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 466 (491)
T 3urh_A 387 KTEEELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRT 466 (491)
T ss_dssp CCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred CCHHHHHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcC
Confidence 5432 111 10 0 012346666665 59999999877777776655 45678888876 3 34
Q ss_pred hcCCCcHHHHHHHHHccCCc
Q 011267 466 LQQASSVEEALEIARAALPV 485 (489)
Q Consensus 466 ~~~~~~~~e~~~~~~~~~~~ 485 (489)
++.|||+.|+++.|++++..
T Consensus 467 ~~~hPt~~e~~~~~~~~~~~ 486 (491)
T 3urh_A 467 CHAHPTMSEAVKEAALSTFF 486 (491)
T ss_dssp CCCSSCTTHHHHHHHHHHHC
T ss_pred ccCCCChHHHHHHHHHHhhh
Confidence 58899999999999887654
No 36
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=5.1e-42 Score=354.95 Aligned_cols=317 Identities=18% Similarity=0.241 Sum_probs=239.3
Q ss_pred HHHC-CcEEEeCCcEEEEeCCCCEEEe-----CCC---eEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHH
Q 011267 130 YKEK-GIEMIYQDPVTSIDIEKQTLIT-----NSG---KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL 200 (489)
Q Consensus 130 ~~~~-~i~~~~~~~V~~id~~~~~v~~-----~~g---~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~ 200 (489)
+++. +++++.+ ++..++. +++.+ .+| .++.||+||||||+.|. .|.++|. +. +.+ .+.+
T Consensus 113 l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~p~-~p~i~g~--~~---~~~---~~~~ 180 (490)
T 1fec_A 113 FADTEGLTFHQG-FGALQDN--HTVLVRESADPNSAVLETLDTEYILLATGSWPQ-HLGIEGD--DL---CIT---SNEA 180 (490)
T ss_dssp HHTSTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEEEEECCCEEEC-CCCSBTG--GG---CBC---HHHH
T ss_pred HhcCCCcEEEEe-EEEEeeC--CEEEEEeeccCCCCceEEEEcCEEEEeCCCCCC-CCCCCCc--cc---eec---HHHH
Confidence 4567 9999987 5777876 45555 366 68999999999999987 4544442 22 222 2333
Q ss_pred HHhhcCCCcEEEECCCHHHHHHHHHHHhC---CCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEE
Q 011267 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277 (489)
Q Consensus 201 ~~~~~~~~~vvViG~G~~g~e~A~~l~~~---g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~ 277 (489)
......+++++|||+|++|+|+|..|.++ |.+|+++++.+++++ .+++++.+.+.+.+++.||++++ ++.|+++.
T Consensus 181 ~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~GV~i~~-~~~v~~i~ 258 (490)
T 1fec_A 181 FYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-GFDSELRKQLTEQLRANGINVRT-HENPAKVT 258 (490)
T ss_dssp TTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-TSCHHHHHHHHHHHHHTTEEEEE-TCCEEEEE
T ss_pred hhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-ccCHHHHHHHHHHHHhCCCEEEe-CCEEEEEE
Confidence 33334578999999999999999999999 999999999999998 48999999999999999999999 99999998
Q ss_pred eCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc-h-hhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCc
Q 011267 278 AGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354 (489)
Q Consensus 278 ~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~-~-~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~ 354 (489)
.++++. ..|.+++|+++++|.||+|+|++|+++ + ++.+|++.+ +|+|.||+++||+.|+|||+|||+..+
T Consensus 259 ~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~------ 331 (490)
T 1fec_A 259 KNADGT-RHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRV------ 331 (490)
T ss_dssp ECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGGCSC------
T ss_pred EcCCCE-EEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCc------
Confidence 654333 367888998999999999999999987 4 788999886 677999999999999999999999632
Q ss_pred ccccccHHHHHHHHHHHHHHHhcCCC--CCCCcCCceeeecccccCCCcceeeeeecCCcCc-------EEE-E------
Q 011267 355 TARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE-------TIE-I------ 418 (489)
Q Consensus 355 ~~~~~~~~~A~~~g~~~a~~l~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~~-------~~~-~------ 418 (489)
..+..|..+|+.+|.||++... ..|..+|+ ...++.+ +..+|....+ ... .
T Consensus 332 ----~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~~~~~~~-------~a~vG~~e~~a~~~~~~~~~~~~~~~~~ 398 (490)
T 1fec_A 332 ----MLTPVAINEGAAFVDTVFANKPRATDHTKVAC--AVFSIPP-------MGVCGYVEEDAAKKYDQVAVYESSFTPL 398 (490)
T ss_dssp ----CCHHHHHHHHHHHHHHHHSSCCCCCCCSSCCE--EECCSSC-------EEEEECCHHHHHHHCSEEEEEEEEECCH
T ss_pred ----cCHHHHHHHHHHHHHHhcCCCCCcCCCCCccE--EEECCCC-------eEEEeCCHHHHHhcCCCEEEEEeecChh
Confidence 2566799999999999997432 23444553 2222222 4556654221 111 0
Q ss_pred -----ccCCCcEE-EEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-hhhcCCCcHHHHHHHHH
Q 011267 419 -----GNFDPKIA-TFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEALEIAR 480 (489)
Q Consensus 419 -----~~~~~~~~-~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~e~~~~~~ 480 (489)
......+. ++.++ +++|+|++++..++.++... ..++..+.+++ . ..++.|||+.|++..++
T Consensus 399 ~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~ 471 (490)
T 1fec_A 399 MHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELCSMR 471 (490)
T ss_dssp HHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGSCC
T ss_pred hhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHHHH
Confidence 11124477 77776 69999999877777775544 55678888875 2 34688999999998765
No 37
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.8e-40 Score=340.01 Aligned_cols=390 Identities=19% Similarity=0.245 Sum_probs=269.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------CC---------------CccccCCCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------PA---------------LTKGYLFPLDKKP 108 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~------~~---------------l~~~~~~~~~~~~ 108 (489)
+++||+|||||+||++||.+|++.|. +|+|||++.. .... |. ....+-.......
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~-GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~ 78 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQ---KCALIEAKEL-GGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINK 78 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC---eEEEEcCCCC-CCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCc
Confidence 45899999999999999999999876 7999999742 1000 00 0000000000000
Q ss_pred CCCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCC
Q 011267 109 ARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (489)
Q Consensus 109 ~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~ 185 (489)
.++..+..... ..........+++.+++++.+ ++..++. +++.+ +|.++.||+||+|||++|. .|.++|.
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~-~p~i~g~-- 151 (450)
T 1ges_A 79 FNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKG-FARFVDA--KTLEV-NGETITADHILIATGGRPS-HPDIPGV-- 151 (450)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CCEEEET--TEEEE-TTEEEEEEEEEECCCEEEC-CCCSTTG--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecC--CEEEE-CCEEEEeCEEEECCCCCCC-CCCCCCc--
Confidence 00000000000 000000112346679999987 5566765 56777 7788999999999999886 4544442
Q ss_pred CceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcE
Q 011267 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (489)
Q Consensus 186 ~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~ 265 (489)
....+. +.+......+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.+.+++.||+
T Consensus 152 ---~~~~~~---~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~ 224 (450)
T 1ges_A 152 ---EYGIDS---DGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-SFDPMISETLVEVMNAEGPQ 224 (450)
T ss_dssp ---GGSBCH---HHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHSCE
T ss_pred ---cceecH---HHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-hhhHHHHHHHHHHHHHCCCE
Confidence 122222 33333334578999999999999999999999999999999999887 48999999999999999999
Q ss_pred EEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc-h-hhhcCCeec-CCcEEeCCCCCCCCCCeEEec
Q 011267 266 FVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTRMPGIFAIG 342 (489)
Q Consensus 266 ~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~-~-~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~G 342 (489)
+++ +++|++++.++++. ..+.+++|+++++|.||+|+|++|+++ + ++.+|++.+ +|+|.||+++||+.|+|||+|
T Consensus 225 i~~-~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA~G 302 (450)
T 1ges_A 225 LHT-NAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVG 302 (450)
T ss_dssp EEC-SCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECS
T ss_pred EEe-CCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCEEEEe
Confidence 999 99999998654443 367888998999999999999999987 3 688899886 567999999999999999999
Q ss_pred cccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC---CCCCcCCceeeecccccCCCcceeeeeecCCcC------
Q 011267 343 DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------ 413 (489)
Q Consensus 343 D~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~------ 413 (489)
||+..+ ..+..|..+|+.+|.||++... ..|..+|+. .|..+. +..+|....
T Consensus 303 D~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~---~~~~~~------~a~vG~~e~~a~~~~ 363 (450)
T 1ges_A 303 DNTGAV----------ELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTV---VFSHPP------IGTVGLTEPQAREQY 363 (450)
T ss_dssp GGGTSC----------CCHHHHHHHHHHHHHHHHTTCTTCCCCCSSCCEE---ECCSSC------EEEEECCHHHHHHHH
T ss_pred ccCCCC----------ccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCeE---EECCCc------eEEEeCCHHHHHhcC
Confidence 998642 2556799999999999997432 234556642 222111 344443211
Q ss_pred ---cEEEE------------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhHHHH-HHHhcCCCCC-h-hhhcCCCcHH
Q 011267 414 ---ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLLP-TLARSQPFVD-K-AKLQQASSVE 473 (489)
Q Consensus 414 ---~~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~~~~~~ 473 (489)
..... ......+.++.++ +++|+|+++++.++.++.... .+++.+.+++ . ..++.|||++
T Consensus 364 g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~ 443 (450)
T 1ges_A 364 GDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAA 443 (450)
T ss_dssp CGGGEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSG
T ss_pred CCCcEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChH
Confidence 11110 1112336666665 699999998776777766554 4578888776 2 4468899999
Q ss_pred HHHHH
Q 011267 474 EALEI 478 (489)
Q Consensus 474 e~~~~ 478 (489)
|++..
T Consensus 444 e~~~~ 448 (450)
T 1ges_A 444 EEFVT 448 (450)
T ss_dssp GGGGS
T ss_pred HHHHh
Confidence 98764
No 38
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.6e-39 Score=334.17 Aligned_cols=402 Identities=17% Similarity=0.229 Sum_probs=278.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCcccc------------------------CC---
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGY------------------------LF--- 102 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~------------------------~~--- 102 (489)
+++||+|||||+||++||.+|++.|. +|+|||+++...-. ..+...+ +.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~gG~-~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g 77 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGL---KTALIEKYKGKEGK-TALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHG 77 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEECCBCTTSS-BCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCCccCCC-CCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999987 79999998632110 0000000 00
Q ss_pred -CCCCCCCCCCCCcccc---CCCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC--eEEeeCcEEecCCCCCCC
Q 011267 103 -PLDKKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASR 176 (489)
Q Consensus 103 -~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~i~yd~lvlATG~~~~~ 176 (489)
.......+++...... ..........++++.+++++.+ ++..++.....+...+| .++.||+||+|||+.|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~ 156 (476)
T 3lad_A 78 ISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEG-HGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVE 156 (476)
T ss_dssp EECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-EEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECC
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCC
Confidence 0000000000000000 0000000113445679999986 55667777777777777 579999999999998864
Q ss_pred CCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHH
Q 011267 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256 (489)
Q Consensus 177 ~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~ 256 (489)
+|. ++.+.+.+.+ ...+......+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.
T Consensus 157 ~~~-~~~~~~~v~~------~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~ 228 (476)
T 3lad_A 157 IPP-APVDQDVIVD------STGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-AVDEQVAKEAQ 228 (476)
T ss_dssp CTT-SCCCSSSEEE------HHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-TSCHHHHHHHH
T ss_pred CCC-CCCCcccEEe------chhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-ccCHHHHHHHH
Confidence 433 2222333332 333333334678999999999999999999999999999999999998 48999999999
Q ss_pred HHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCC---cEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCC
Q 011267 257 QLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDG---STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQ 330 (489)
Q Consensus 257 ~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g---~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~ 330 (489)
+.+++.||++++ +++|++++.+++ .+ .+.+.++ +++++|.||+|+|++|++++ ++.+|++.+ +|+|.||++
T Consensus 229 ~~l~~~Gv~v~~-~~~v~~i~~~~~-~~-~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~ 305 (476)
T 3lad_A 229 KILTKQGLKILL-GARVTGTEVKNK-QV-TVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDY 305 (476)
T ss_dssp HHHHHTTEEEEE-TCEEEEEEECSS-CE-EEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTT
T ss_pred HHHHhCCCEEEE-CCEEEEEEEcCC-EE-EEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCC
Confidence 999999999999 999999986433 33 4666554 67999999999999999874 678888886 567999999
Q ss_pred CCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC-CCCCcCCceeeecccccCCCcceeeeeec
Q 011267 331 FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT-HTYDYLPYFYSRVFEYEGSPRKVWWQFFG 409 (489)
Q Consensus 331 ~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~G 409 (489)
+||+.|+|||+|||+..+. .+..|..+|+.+|.||++... ..+..+|+ .. |..+ .+..+|
T Consensus 306 ~~t~~~~Iya~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~--~~-~~~~------~~a~vG 366 (476)
T 3lad_A 306 CATSVPGVYAIGDVVRGAM----------LAHKASEEGVVVAERIAGHKAQMNYDLIPA--VI-YTHP------EIAGVG 366 (476)
T ss_dssp SBCSSTTEEECGGGSSSCC----------CHHHHHHHHHHHHHHHHHCCCCCCTTCCCE--EE-CSSS------EEEEEE
T ss_pred cccCCCCEEEEEccCCCcc----------cHHHHHHHHHHHHHHhcCCCcccCCCCCCE--EE-ECcC------CEEEee
Confidence 9999999999999996432 455699999999999997432 23444554 22 3221 144555
Q ss_pred CCcC-------cEE--EE--c--------cCCCcEEEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-hh
Q 011267 410 DNVG-------ETI--EI--G--------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AK 465 (489)
Q Consensus 410 ~~~~-------~~~--~~--~--------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~ 465 (489)
.... +.. .. . .....+.++.++ +++|+|+++++.++.++... ..+|..+.+++ . ..
T Consensus 367 lte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~ 446 (476)
T 3lad_A 367 KTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMM 446 (476)
T ss_dssp CCHHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTS
T ss_pred CCHHHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcC
Confidence 5432 111 11 0 012346666654 59999999877777776655 45678888876 3 44
Q ss_pred hcCCCcHHHHHHHHHccCCcc
Q 011267 466 LQQASSVEEALEIARAALPVE 486 (489)
Q Consensus 466 ~~~~~~~~e~~~~~~~~~~~~ 486 (489)
++.|||+.|+++.|++++..+
T Consensus 447 ~~~hPt~~e~~~~~~~~~~~~ 467 (476)
T 3lad_A 447 VFAHPALSEALHEAALAVSGH 467 (476)
T ss_dssp CCCSSCSHHHHHHHHHHHTTC
T ss_pred ccCCCChHHHHHHHHHHHhcc
Confidence 588999999999999876543
No 39
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.5e-40 Score=341.72 Aligned_cols=391 Identities=18% Similarity=0.288 Sum_probs=269.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---C---CC------------C--ccccCCCCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---R---PA------------L--TKGYLFPLDKKPA 109 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~---~---~~------------l--~~~~~~~~~~~~~ 109 (489)
+++||+|||||+||++||.+|++.|. +|+|||++.. .-. + |. + ...+-........
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~-GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 78 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGK---RVALIESKAL-GGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTL 78 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---C
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCC---cEEEEcCCCC-CCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCc
Confidence 46899999999999999999999876 7999999742 100 0 00 0 0000000000000
Q ss_pred CCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCC
Q 011267 110 RLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLP 186 (489)
Q Consensus 110 ~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~ 186 (489)
++..+..... ..........+++.+++++.+ ++..++. ++|.+ +|.++.||+||+|||+.|. .|.++|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~-~p~i~G~--- 150 (463)
T 2r9z_A 79 DWPRLVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVDA--HTIEV-EGQRLSADHIVIATGGRPI-VPRLPGA--- 150 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET--TEEEE-TTEEEEEEEEEECCCEEEC-CCSCTTG---
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEccC--CEEEE-CCEEEEcCEEEECCCCCCC-CCCCCCc---
Confidence 0000000000 000000122346679999987 5666764 56777 7788999999999999886 3444442
Q ss_pred ceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEE
Q 011267 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 266 (489)
Q Consensus 187 gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~ 266 (489)
....+ .+.+......+++++|||+|++|+|+|..|.++|.+|+++++.+++++. +++++.+.+.+.+++.||++
T Consensus 151 --~~~~~---~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i 224 (463)
T 2r9z_A 151 --ELGIT---SDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLLSATLAENMHAQGIET 224 (463)
T ss_dssp --GGSBC---HHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEE
T ss_pred --cceec---HHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEE
Confidence 11222 3333333345789999999999999999999999999999999998874 89999999999999999999
Q ss_pred EEcCceEEEEEeCCCCcEEEEEeCCCc-EEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCCCCeEEec
Q 011267 267 VKVGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIG 342 (489)
Q Consensus 267 ~~~~~~v~~i~~~~~~~v~~v~~~~g~-~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~G 342 (489)
++ +++|++++.++++ ..|.+++|+ ++++|.||+|+|++|++++ ++++|++.+ +|+|.||+++||+.|+|||+|
T Consensus 225 ~~-~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~G 301 (463)
T 2r9z_A 225 HL-EFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVYALG 301 (463)
T ss_dssp ES-SCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEEECG
T ss_pred Ee-CCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEEEEe
Confidence 99 9999999854333 468888998 8999999999999999873 578888876 577999999999999999999
Q ss_pred cccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC---CCCCcCCceeeecccccCCCcceeeeeecCCcC------
Q 011267 343 DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT---HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG------ 413 (489)
Q Consensus 343 D~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~------ 413 (489)
||+..+ ..+..|..+|+.+|.||++... ..|..+|+. .|..+. +..+|....
T Consensus 302 D~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~p~~---~~~~~~------~a~vGl~e~~a~~~~ 362 (463)
T 2r9z_A 302 DITGRD----------QLTPVAIAAGRRLAERLFDGQSERKLDYDNIPTV---VFAHPP------LSKVGLSEPEARERL 362 (463)
T ss_dssp GGGTSC----------CCHHHHHHHHHHHHHHHHSCCTTCCCCCSSCCEE---ECCSSC------EEEEECCHHHHHHHH
T ss_pred ecCCCc----------ccHHHHHHHHHHHHHHHcCCCCcccCCCCCCCEE---EeCCCC------eEEEcCCHHHHHhcC
Confidence 998632 2566799999999999997432 334556642 222211 334443211
Q ss_pred --cEEEE------------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-hhhcCCCcHHH
Q 011267 414 --ETIEI------------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEE 474 (489)
Q Consensus 414 --~~~~~------------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~e 474 (489)
..... ......+.+++++ +++|+|++++...+.++... ..++..+.+++ . ..++.|||++|
T Consensus 363 g~~~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 442 (463)
T 2r9z_A 363 GDVLTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAE 442 (463)
T ss_dssp CSCEEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGG
T ss_pred CCCEEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHH
Confidence 11110 1112346777765 69999999866667665555 45578888775 2 44688999999
Q ss_pred HHHHHH
Q 011267 475 ALEIAR 480 (489)
Q Consensus 475 ~~~~~~ 480 (489)
++..++
T Consensus 443 ~~~~~~ 448 (463)
T 2r9z_A 443 ELVTLK 448 (463)
T ss_dssp GGGCCC
T ss_pred HHHHHH
Confidence 988754
No 40
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=4.4e-40 Score=340.10 Aligned_cols=396 Identities=19% Similarity=0.227 Sum_probs=271.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC--C-C--C--------------CCccccCCCCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--E-R--P--------------ALTKGYLFPLDKKPA 109 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y--~-~--~--------------~l~~~~~~~~~~~~~ 109 (489)
+.++||+|||||+||++||..|++.|. +|+|||++....- + . | .....+-........
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~---~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGA---RAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKF 94 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 346899999999999999999999987 6999997742100 0 0 0 000000000000000
Q ss_pred CCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCC--CCCCCC
Q 011267 110 RLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGGY 184 (489)
Q Consensus 110 ~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p--~~~g~~ 184 (489)
.+........ ..........+++.+++++.+ ++..++.....+. .++.++.||+||+|||+.|..++ .++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G-- 170 (478)
T 3dk9_A 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPG-- 170 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTT--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCC--
Confidence 0000000000 000000112345679999986 6777777667777 46778999999999999886431 3333
Q ss_pred CCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCc
Q 011267 185 LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV 264 (489)
Q Consensus 185 ~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv 264 (489)
..... +.+.+......+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.+.+++.||
T Consensus 171 ---~~~~~---~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~~~~~l~~~gv 243 (478)
T 3dk9_A 171 ---ASLGI---TSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-SFDSMISTNCTEELENAGV 243 (478)
T ss_dssp ---GGGSB---CHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-TSCHHHHHHHHHHHHHTTC
T ss_pred ---CceeE---chHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc-ccCHHHHHHHHHHHHHCCC
Confidence 22222 2334433334579999999999999999999999999999999999987 5899999999999999999
Q ss_pred EEEEcCceEEEEEeCCCCcEEEEEeCC---C----cEEEcCEEEEccCCCCCCc-h-hhhcCCeec-CCcEEeCCCCCCC
Q 011267 265 KFVKVGASIKNLEAGSDGRVAAVKLED---G----STIDADTIVIGIGAKPTVS-P-FERVGLNSS-VGGIQVDGQFRTR 334 (489)
Q Consensus 265 ~~~~~~~~v~~i~~~~~~~v~~v~~~~---g----~~i~aD~vi~a~G~~p~~~-~-~~~~gl~~~-~g~i~vd~~~~t~ 334 (489)
++++ ++.|++++..+++....+.+.+ | +++++|.||+|+|++|+++ + ++.+|++.+ +|+|.||+++||+
T Consensus 244 ~i~~-~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~ 322 (478)
T 3dk9_A 244 EVLK-FSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTN 322 (478)
T ss_dssp EEET-TEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBCS
T ss_pred EEEe-CCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCcccC
Confidence 9999 9999999865555233567765 2 5799999999999999987 4 788899885 5779999999999
Q ss_pred CCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC-C--CCCCcCCceeeecccccCCCcceeeeeecCC
Q 011267 335 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ-T--HTYDYLPYFYSRVFEYEGSPRKVWWQFFGDN 411 (489)
Q Consensus 335 ~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~-~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~ 411 (489)
.|+|||+|||+..+. .+..|..+|+.+|.||++.. . ..|..+|+. .|..+. +..+|..
T Consensus 323 ~~~IyA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~---~~~~p~------~a~vGlt 383 (478)
T 3dk9_A 323 VKGIYAVGDVCGKAL----------LTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTV---VFSHPP------IGTVGLT 383 (478)
T ss_dssp STTEEECGGGGCSSC----------CHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEE---ECCSSC------EEEEECC
T ss_pred CCCEEEEEecCCCCc----------cHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeE---EECCCc------eEEeeCC
Confidence 999999999995432 45668999999999999752 2 244555642 332221 3445543
Q ss_pred cC---------cEEEE----c--------cCCCcEEEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC--hhh
Q 011267 412 VG---------ETIEI----G--------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD--KAK 465 (489)
Q Consensus 412 ~~---------~~~~~----~--------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~ 465 (489)
.. ..... . +....+.++.++ +++|+|+++++.++.++... ..++..+.+++ ...
T Consensus 384 e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 463 (478)
T 3dk9_A 384 EDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNT 463 (478)
T ss_dssp HHHHHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTS
T ss_pred HHHHHhhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhc
Confidence 21 01110 0 111346666654 59999999877777776655 45678888876 344
Q ss_pred hcCCCcHHHHHHH
Q 011267 466 LQQASSVEEALEI 478 (489)
Q Consensus 466 ~~~~~~~~e~~~~ 478 (489)
++.|||+.|++..
T Consensus 464 ~~~hPt~~e~~~~ 476 (478)
T 3dk9_A 464 VAIHPTSSEELVT 476 (478)
T ss_dssp CCCSSSSGGGGGS
T ss_pred ccCCCChHHHHHh
Confidence 6889999998864
No 41
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.7e-39 Score=333.48 Aligned_cols=394 Identities=16% Similarity=0.217 Sum_probs=268.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---C-CCCccccC-----------------CCC--CC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---R-PALTKGYL-----------------FPL--DK 106 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~---~-~~l~~~~~-----------------~~~--~~ 106 (489)
.++||||||||+||++||.+|++.|. +|+|||++. .... + +.-++.++ +.. ..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~-~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~ 79 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGI---PTVLVEGQA-LGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVAS 79 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---EEEEEccCC-CCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCC
Confidence 46899999999999999999999986 799999953 2100 0 00000000 000 00
Q ss_pred CCCCCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCC
Q 011267 107 KPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGG 183 (489)
Q Consensus 107 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~ 183 (489)
...++..+..... ........+++++.+++++.+..+ .++ .+++.+.+ .++.||+||||||++|..+|..+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~-~~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~- 154 (458)
T 1lvl_A 80 PRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAK-VLD--GKQVEVDG-QRIQCEHLLLATGSSSVELPMLPL- 154 (458)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEE-EEE--TTEEEETT-EEEECSEEEECCCEEECCBTTBCC-
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEE-Ecc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCc-
Confidence 0000000000000 000000124567789999987543 455 46788866 779999999999999864432331
Q ss_pred CCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcC
Q 011267 184 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNG 263 (489)
Q Consensus 184 ~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~G 263 (489)
+ ..+ .+..+ .......+++++|||+|++|+|+|..|+++|.+|+++++.+++++ .+++++.+.+.+.+++.|
T Consensus 155 ~-~~v---~~~~~---~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-~~~~~~~~~l~~~l~~~g 226 (458)
T 1lvl_A 155 G-GPV---ISSTE---ALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-TYDSELTAPVAESLKKLG 226 (458)
T ss_dssp B-TTE---ECHHH---HTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHHT
T ss_pred c-CcE---ecHHH---HhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHCC
Confidence 1 122 22222 222223578999999999999999999999999999999999998 589999999999999999
Q ss_pred cEEEEcCceEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEccCCCCCCch--hhhcCCeecCCcEEeCCCCCCCCCCeE
Q 011267 264 VKFVKVGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSP--FERVGLNSSVGGIQVDGQFRTRMPGIF 339 (489)
Q Consensus 264 v~~~~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~~g~i~vd~~~~t~~~~Iy 339 (489)
|++++ +++|++++. +.+ .+...+| +++++|.||+|+|++|++++ ++.+|++.++++|.||+++||+.|+||
T Consensus 227 v~i~~-~~~v~~i~~---~~v-~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~Iy 301 (458)
T 1lvl_A 227 IALHL-GHSVEGYEN---GCL-LANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNVW 301 (458)
T ss_dssp CEEET-TCEEEEEET---TEE-EEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTTEE
T ss_pred CEEEE-CCEEEEEEe---CCE-EEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCCEE
Confidence 99999 999999984 223 3444456 68999999999999999886 688899876338999999999999999
Q ss_pred EeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCC--CCcCCceeeecccccCCCcceeeeeecCCcC----
Q 011267 340 AIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHT--YDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG---- 413 (489)
Q Consensus 340 a~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~---- 413 (489)
|+|||+..+. .+..|..+|+.+|.||++. ... +..+|+ ...++.. +..+|....
T Consensus 302 a~GD~~~~~~----------~~~~A~~~g~~aa~~i~g~-~~~~~~~~~p~--~~~~~p~-------~a~vG~~e~~a~~ 361 (458)
T 1lvl_A 302 AIGDVAGEPM----------LAHRAMAQGEMVAEIIAGK-ARRFEPAAIAA--VCFTDPE-------VVVVGKTPEQASQ 361 (458)
T ss_dssp ECGGGGCSSC----------CHHHHHHHHHHHHHHHTTC-CCCCCCSCCCE--EECSSSE-------EEEEECCHHHHHH
T ss_pred EeeccCCCcc----------cHHHHHHHHHHHHHHhcCC-CccCCCCCCCE--EEECCCC-------eEEEeCCHHHHHH
Confidence 9999997532 4556999999999999963 333 333443 2222211 333443211
Q ss_pred ---cEEE--E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHH-hHHHHHHHhcCCCCC--hhhhcCCCcHH
Q 011267 414 ---ETIE--I----------GNFDPKIATFWID--SGKLKGVLVESGSPEE-FQLLPTLARSQPFVD--KAKLQQASSVE 473 (489)
Q Consensus 414 ---~~~~--~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~ 473 (489)
+... . ......+.+++++ +++|+|+++++..+.+ +..+..++.++.+++ ...++.|||+.
T Consensus 362 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~ 441 (458)
T 1lvl_A 362 QGLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLG 441 (458)
T ss_dssp TTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTT
T ss_pred cCCCEEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHH
Confidence 1111 0 0112357777774 6999999986666555 445566788888876 23468899999
Q ss_pred HHHHHHHccCCc
Q 011267 474 EALEIARAALPV 485 (489)
Q Consensus 474 e~~~~~~~~~~~ 485 (489)
|++..|++++..
T Consensus 442 e~~~~a~~~~~~ 453 (458)
T 1lvl_A 442 EAVQEAALRALG 453 (458)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 999999876543
No 42
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.4e-39 Score=334.28 Aligned_cols=398 Identities=20% Similarity=0.251 Sum_probs=270.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC----CCCccccCC----------CC-----CCCCCCCC
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER----PALTKGYLF----------PL-----DKKPARLP 112 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~----~~l~~~~~~----------~~-----~~~~~~~~ 112 (489)
+||+|||||+||++||.+|++.|. +|+|||+++..+... +.-++.++. .. .....++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ 78 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGM---KVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLP 78 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCC---eEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHH
Confidence 699999999999999999999976 799999986532110 000000000 00 00000000
Q ss_pred CCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeC-CCeEEeeCcEEecCCCCCCCCCCCCCCCCCce
Q 011267 113 GFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGV 188 (489)
Q Consensus 113 ~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~-~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv 188 (489)
.+..... .........++++.+++++.+. +..++. +.+.+. +|.++.||+||+|||++|.. |..++.+.+++
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i~~--~~~~v~~~g~~~~~d~lviAtG~~p~~-~~~~g~~~~~v 154 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGIARHQGT-ARFLSE--RKVLVEETGEELEARYILIATGSAPLI-PPWAQVDYERV 154 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESC-EEESSS--SEEEETTTCCEEEEEEEEECCCEEECC-CTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecC--CeEEEeeCCEEEEecEEEECCCCCCCC-CCCCCCCcCcE
Confidence 0000000 0000001245566799999874 444544 444443 67789999999999998864 44444333333
Q ss_pred EeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEE
Q 011267 189 HYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK 268 (489)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~ 268 (489)
.+ .+.+......+++++|||+|++|+|+|..|++.|.+|+++++.+++++. +++.+.+.+.+.+++.||++++
T Consensus 155 ~~------~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~ 227 (455)
T 2yqu_A 155 VT------STEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEVSRAAERVFKKQGLTIRT 227 (455)
T ss_dssp EC------HHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHHTCEEEC
T ss_pred ec------hHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHHHHHHHHHHHHCCCEEEE
Confidence 32 2222222235789999999999999999999999999999999998884 7999999999999999999999
Q ss_pred cCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCCCCeEEecccc
Q 011267 269 VGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVA 345 (489)
Q Consensus 269 ~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a 345 (489)
+++|++++.++ +. ..+.+++|+++++|.||+|+|.+|++++ ++.+|++.+ +|.+.||+++||+.|+|||+|||+
T Consensus 228 -~~~V~~i~~~~-~~-v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~GD~~ 304 (455)
T 2yqu_A 228 -GVRVTAVVPEA-KG-ARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAIGDVV 304 (455)
T ss_dssp -SCCEEEEEEET-TE-EEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEECGGGS
T ss_pred -CCEEEEEEEeC-CE-EEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEEecCC
Confidence 99999998543 23 3567778889999999999999999887 678888876 466999999999999999999999
Q ss_pred ccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCcCCceeeecccccCCCcceeeeeecCCcC-------cEEE-
Q 011267 346 AFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-------ETIE- 417 (489)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~-------~~~~- 417 (489)
..+. .+..|..+|+.+|.||++. ...+.+.+..|...++.. +..+|.... +...
T Consensus 305 ~~~~----------~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~~~~~-------~a~~G~~~~~a~~~g~~~~~~ 366 (455)
T 2yqu_A 305 RGPM----------LAHKASEEGIAAVEHMVRG-FGHVDYQAIPSVVYTHPE-------IAAVGYTEEELKAQGIPYKVG 366 (455)
T ss_dssp SSCC----------CHHHHHHHHHHHHHHHHHS-CCCCCGGGCCEEECSSSE-------EEEEECCHHHHHHHTCCEEEE
T ss_pred CCcc----------CHHHHHHhHHHHHHHHcCC-CccCCCCCCCEEEEcCCc-------eEEEECCHHHHHHcCCCEEEE
Confidence 7532 4556899999999999974 333333222223322221 334443221 1111
Q ss_pred -E----------ccCCCcEEEEEEE--CCEEEEEEeccCCHHHhH-HHHHHHhcCCCCC--hhhhcCCCcHHHHHHHHHc
Q 011267 418 -I----------GNFDPKIATFWID--SGKLKGVLVESGSPEEFQ-LLPTLARSQPFVD--KAKLQQASSVEEALEIARA 481 (489)
Q Consensus 418 -~----------~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~e~~~~~~~ 481 (489)
. ......+.+++++ +++|+|++++...+.++. .+..++.++.+++ ...+..|||+.|++..+++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~e~~~~~~~ 446 (455)
T 2yqu_A 367 KFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEAAL 446 (455)
T ss_dssp EEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTHHHHHHHHH
T ss_pred EEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHH
Confidence 0 0112457777775 699999998666665544 4455678888886 2446889999999999987
Q ss_pred cCC
Q 011267 482 ALP 484 (489)
Q Consensus 482 ~~~ 484 (489)
++.
T Consensus 447 ~~~ 449 (455)
T 2yqu_A 447 AAW 449 (455)
T ss_dssp HHH
T ss_pred HHh
Confidence 644
No 43
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.1e-41 Score=344.12 Aligned_cols=395 Identities=19% Similarity=0.266 Sum_probs=275.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------CC--------------CccccCCCCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------PA--------------LTKGYLFPLDKKPA 109 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~------~~--------------l~~~~~~~~~~~~~ 109 (489)
.++||+|||||++|++||..|++.|. +|+|||++. ..... |. ....+-........
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~---~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGK---KVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRF 79 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 46899999999999999999999987 799999943 21000 00 00000000000000
Q ss_pred CCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEe-CCCeEEeeCcEEecCCCCCCCCCCCCCCCC
Q 011267 110 RLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT-NSGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (489)
Q Consensus 110 ~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~-~~g~~i~yd~lvlATG~~~~~~p~~~g~~~ 185 (489)
++........ .........++++.+++++.+ ++..++ .+.+.+ .++..+.||+||+|||+.|...|..+|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~-- 154 (463)
T 4dna_A 80 DWAKLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--PNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGH-- 154 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--SSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTG--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--CCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCc--
Confidence 0000000000 000001123345569999986 666655 467777 5788899999999999987623443442
Q ss_pred CceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcE
Q 011267 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (489)
Q Consensus 186 ~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~ 265 (489)
....+ .+.+......+++++|||+|++|+|+|..+.+.|.+|+++++.+++++ .+++++.+.+.+.+++.||+
T Consensus 155 ---~~~~~---~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~-~~~~~~~~~l~~~l~~~Gv~ 227 (463)
T 4dna_A 155 ---ELCIT---SNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS-RFDQDMRRGLHAAMEEKGIR 227 (463)
T ss_dssp ---GGCBC---HHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-TSCHHHHHHHHHHHHHTTCE
T ss_pred ---ccccc---HHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-ccCHHHHHHHHHHHHHCCCE
Confidence 22222 333333334589999999999999999999999999999999999887 48999999999999999999
Q ss_pred EEEcCceEEEEEeCCCCcEEEEE-eCCCcEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCCCCeEEe
Q 011267 266 FVKVGASIKNLEAGSDGRVAAVK-LEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAI 341 (489)
Q Consensus 266 ~~~~~~~v~~i~~~~~~~v~~v~-~~~g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~ 341 (489)
+++ ++.|++++.++++. ..|. +++|+ +++|.||+|+|++|++++ ++.+|++.+ +|+|.||+++||++|+|||+
T Consensus 228 i~~-~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~iya~ 304 (463)
T 4dna_A 228 ILC-EDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYAL 304 (463)
T ss_dssp EEC-SCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSSTTEEEC
T ss_pred EEC-CCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCCCCEEEE
Confidence 999 99999998654444 3678 88887 999999999999999987 788999886 57799999999999999999
Q ss_pred ccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCcCCceeeecccccCCCcceeeeeecCCcCc-----
Q 011267 342 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE----- 414 (489)
Q Consensus 342 GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~~----- 414 (489)
|||+..+. .+..|..+|+.+|.||++.... .+..+|+. .|..+. +..+|....+
T Consensus 305 GD~~~~~~----------~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p~------~a~vG~te~~a~~~~ 365 (463)
T 4dna_A 305 GDVTDRVQ----------LTPVAIHEAMCFIETEYKNNPTSPDHDLIATA---VFSQPE------IGTVGITEEEAARKF 365 (463)
T ss_dssp SGGGSSCC----------CHHHHHHHHHHHHHHHHSSCCCCCCCSCCCEE---ECSSSC------EEEEECCHHHHHHHS
T ss_pred EecCCCCC----------ChHHHHHHHHHHHHHHcCCCCcccCCCCCCEE---EECCCC------eEEecCCHHHHHHcC
Confidence 99997432 4566999999999999975433 34445542 233221 4455554321
Q ss_pred --EE-EE---cc--------CCCcEEEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-hhhcCCCcHHHH
Q 011267 415 --TI-EI---GN--------FDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEA 475 (489)
Q Consensus 415 --~~-~~---~~--------~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~e~ 475 (489)
.. .. .. ....+.++.++ +++|+|+++++.++.++... ..++..+.+++ . ..++.|||+.|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~ 445 (463)
T 4dna_A 366 QEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEE 445 (463)
T ss_dssp SEEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGG
T ss_pred CCeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHH
Confidence 11 00 00 12346666665 59999999877777776655 45578888876 3 446889999999
Q ss_pred HHHHHcc
Q 011267 476 LEIARAA 482 (489)
Q Consensus 476 ~~~~~~~ 482 (489)
+..++..
T Consensus 446 ~~~~~~~ 452 (463)
T 4dna_A 446 LVTMYQP 452 (463)
T ss_dssp GTCCCSC
T ss_pred HHHHhhh
Confidence 9887743
No 44
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=4.2e-39 Score=333.41 Aligned_cols=400 Identities=18% Similarity=0.227 Sum_probs=271.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC-CCCccc---------------------------c
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER-PALTKG---------------------------Y 100 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~-~~l~~~---------------------------~ 100 (489)
..++||+|||||+||++||..|++.|. +|+|||+.+..++.. ..+-.. +
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~ 80 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGK---KVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHY 80 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhc
Confidence 356899999999999999999999986 799999743322211 111000 0
Q ss_pred CCCCC-CCCCCCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC--eEEeeCcEEecCCCCC
Q 011267 101 LFPLD-KKPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTA 174 (489)
Q Consensus 101 ~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~i~yd~lvlATG~~~ 174 (489)
-.... ....++........ ..........+++.+++++.+ ++..+++....+.+.+| .++.||+||||||+.|
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p 159 (488)
T 3dgz_A 81 GWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRP 159 (488)
T ss_dssp TCCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCC
Confidence 00000 00000000000000 000000112345678999875 67777766667777777 5799999999999998
Q ss_pred CCCCC-CCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHH
Q 011267 175 SRFPE-KIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQ 253 (489)
Q Consensus 175 ~~~p~-~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~ 253 (489)
.. |. ++|.... .. +.+.+......+++++|||+|++|+|+|..|.++|.+|+++++. .+++ .+++++.+
T Consensus 160 ~~-p~~i~G~~~~----~~---~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~-~~l~-~~d~~~~~ 229 (488)
T 3dgz_A 160 RY-PTQVKGALEY----GI---TSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLR-GFDQQMSS 229 (488)
T ss_dssp CC-CSSCBTHHHH----CB---CHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSST-TSCHHHHH
T ss_pred CC-CCCCCCcccc----cC---cHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC-cccc-cCCHHHHH
Confidence 74 43 4442111 11 23333333346789999999999999999999999999999986 4555 47999999
Q ss_pred HHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCC---Cc--EEEcCEEEEccCCCCCCch--hhhcCCeec--CCc
Q 011267 254 RYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSP--FERVGLNSS--VGG 324 (489)
Q Consensus 254 ~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i~aD~vi~a~G~~p~~~~--~~~~gl~~~--~g~ 324 (489)
.+.+.+++.||++++ ++.++++...+++.+ .+.+.+ |+ ++++|.||+|+|++|++++ ++.+|++.+ +|+
T Consensus 230 ~l~~~l~~~gv~~~~-~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~ 307 (488)
T 3dgz_A 230 LVTEHMESHGTQFLK-GCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQK 307 (488)
T ss_dssp HHHHHHHHTTCEEEE-TEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCC
T ss_pred HHHHHHHHCCCEEEe-CCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCe
Confidence 999999999999999 999999986444443 355443 54 4899999999999999987 678899876 577
Q ss_pred EEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCcCCceeeecccccCCCcc
Q 011267 325 IQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRK 402 (489)
Q Consensus 325 i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~--~~~~~p~~~~~~~~~~~~~~~ 402 (489)
|.||+++||++|+|||+|||+... ...+..|..+|+.+|.||++.... .+..+|+.+ |..+
T Consensus 308 i~vd~~~~t~~~~IyA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~~---~~~p----- 370 (488)
T 3dgz_A 308 IIVDAQEATSVPHIYAIGDVAEGR---------PELTPTAIKAGKLLAQRLFGKSSTLMDYSNVPTTV---FTPL----- 370 (488)
T ss_dssp BCCCTTSBCSSTTEEECGGGBTTC---------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEEE---CSSS-----
T ss_pred EeECCCCccCCCCEEEeEEecCCC---------CcchhHHHHHHHHHHHHHcCCCCccCCCCCCCEEE---ECCC-----
Confidence 999999999999999999998522 125567999999999999975432 345566532 2221
Q ss_pred eeeeeecCCcC---------cE-EEEc------------cCCCcEEEEEEE---CCEEEEEEeccCCHHHhHHH-HHHHh
Q 011267 403 VWWQFFGDNVG---------ET-IEIG------------NFDPKIATFWID---SGKLKGVLVESGSPEEFQLL-PTLAR 456 (489)
Q Consensus 403 ~~~~~~G~~~~---------~~-~~~~------------~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~-~~~~~ 456 (489)
.+..+|.... .. +... +....+.++.++ +++|+|++++..++.++... ..+|.
T Consensus 371 -~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~ 449 (488)
T 3dgz_A 371 -EYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIK 449 (488)
T ss_dssp -EEEEEECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHH
T ss_pred -CeEEEeCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 1344554321 01 1110 002346676665 49999999877777776655 45678
Q ss_pred cCCCCC--hhhhcCCCcHHHHHHHHHcc
Q 011267 457 SQPFVD--KAKLQQASSVEEALEIARAA 482 (489)
Q Consensus 457 ~~~~~~--~~~~~~~~~~~e~~~~~~~~ 482 (489)
++.+++ ...++.|||++|++..+...
T Consensus 450 ~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 477 (488)
T 3dgz_A 450 CGASYAQVMQTVGIHPTCSEEVVKLHIS 477 (488)
T ss_dssp TTCBHHHHHTSCCCSSCSTHHHHTCCEE
T ss_pred CCCCHHHHhccccCCCChHHHHHHHHHH
Confidence 888876 34468899999999987644
No 45
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.9e-40 Score=343.98 Aligned_cols=401 Identities=17% Similarity=0.209 Sum_probs=252.9
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-CCCCc-----------cccCCCC-----CCCCCCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-RPALT-----------KGYLFPL-----DKKPARLPG 113 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~-~~~l~-----------~~~~~~~-----~~~~~~~~~ 113 (489)
.||+||||||+||+.||.++++.|. +|+|||+.....+. +..+- |.++... ........+
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~---kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGA---RVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTC---CEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 5899999999999999999999987 69999976532221 11110 1000000 000000000
Q ss_pred Cccc-cCCCC--------------CCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeC----CCeEEeeCcEEecCCCCC
Q 011267 114 FHTC-VGSGG--------------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN----SGKLLKYGSLIVATGCTA 174 (489)
Q Consensus 114 ~~~~-~~~~~--------------~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~----~g~~i~yd~lvlATG~~~ 174 (489)
+... ...++ .......+++.+++++.+ ...-+++..-.|... +++++.++++|||||++|
T Consensus 119 i~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G-~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P 197 (542)
T 4b1b_A 119 WKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYING-LAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRP 197 (542)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECE-EEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-eEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCC
Confidence 0000 00000 000123356679998876 555566544344333 345799999999999999
Q ss_pred CCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHH
Q 011267 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (489)
Q Consensus 175 ~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~ 254 (489)
..+|..++ .+...+ +++.++..-..+++++|||||++|+|+|..++++|.+||++.+ +++|+ .+|+++++.
T Consensus 198 ~~P~~~~~---~~~~~~----ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~-~~~L~-~~D~ei~~~ 268 (542)
T 4b1b_A 198 HIPDDVEG---AKELSI----TSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLR-GFDQQCAVK 268 (542)
T ss_dssp CCCSSSBT---HHHHCB----CHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEES-SCSST-TSCHHHHHH
T ss_pred CCCCcccC---CCcccc----CchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecc-ccccc-ccchhHHHH
Confidence 74433222 111111 3455655556789999999999999999999999999999987 46776 489999999
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCch--hhhcCCeec-CCc-EEeCCC
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGG-IQVDGQ 330 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~-i~vd~~ 330 (489)
+.+.|++.||++++ ++.++++...+ +. ..|.+.+++++.+|.|++|+|++||++. ++.+|+..+ +++ +.+|++
T Consensus 269 l~~~l~~~gi~~~~-~~~v~~~~~~~-~~-~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~ 345 (542)
T 4b1b_A 269 VKLYMEEQGVMFKN-GILPKKLTKMD-DK-ILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHL 345 (542)
T ss_dssp HHHHHHHTTCEEEE-TCCEEEEEEET-TE-EEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTT
T ss_pred HHHHHHhhcceeec-ceEEEEEEecC-Ce-EEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEecccc
Confidence 99999999999999 99999998643 33 3578889989999999999999999986 567788775 344 578999
Q ss_pred CCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCcCCceeeecccccCCCcceeeeee
Q 011267 331 FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFF 408 (489)
Q Consensus 331 ~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~ 408 (489)
+||++|+|||+|||+..... ....|..+|+.++.++++.... .|..+|+. .|..+- +..+
T Consensus 346 ~~Ts~p~IyAiGDv~~~~p~---------La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~---vft~Pe------iA~V 407 (542)
T 4b1b_A 346 SCTNIPSIFAVGDVAENVPE---------LAPVAIKAGEILARRLFKDSDEIMDYSYIPTS---IYTPIE------YGAC 407 (542)
T ss_dssp SBCSSTTEEECTTSBTTCCC---------CHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEE---ECSSSC------EEEE
T ss_pred ccccCCCeEEeccccCCchh---------HHHHHHHHHHHHHHHHhcCCCcccCCCCCceE---EeCCCC------eEEE
Confidence 99999999999999964211 2344889999999999975443 35556653 343321 3333
Q ss_pred cCCcCc---------E-EEE--------------------------ccCCCcEEEEE-EE--CCEEEEEEeccCCHHHhH
Q 011267 409 GDNVGE---------T-IEI--------------------------GNFDPKIATFW-ID--SGKLKGVLVESGSPEEFQ 449 (489)
Q Consensus 409 G~~~~~---------~-~~~--------------------------~~~~~~~~~~~-~~--~~~~~g~~~~~~~~~~~~ 449 (489)
|....+ + +.. ......+.++. ++ +++|+|+++++.++.++.
T Consensus 408 GlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI 487 (542)
T 4b1b_A 408 GYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVT 487 (542)
T ss_dssp ECCHHHHHHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHH
T ss_pred eCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHH
Confidence 432110 0 000 00012345554 33 489999999877888877
Q ss_pred HHHH-HHhcCCCCC--hhhhcCCCcHHHHHHHHHccCCc
Q 011267 450 LLPT-LARSQPFVD--KAKLQQASSVEEALEIARAALPV 485 (489)
Q Consensus 450 ~~~~-~~~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~ 485 (489)
.... +|..+.+++ ...++.|||++|++..+..++.+
T Consensus 488 ~~~alAi~~~~t~~dl~~~i~~HPTlsE~l~~~~~t~~~ 526 (542)
T 4b1b_A 488 QGMALALRLKVKKKDFDNCIGIHPTDAESFMNLFVTISS 526 (542)
T ss_dssp HHHHHHHHTCCBHHHHHHC--------------------
T ss_pred HHHHHHHHcCCCHHHHhccCCcCCCHHHHHHHHHHHHHc
Confidence 6655 468888876 34468999999999999887654
No 46
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.4e-39 Score=334.84 Aligned_cols=399 Identities=20% Similarity=0.230 Sum_probs=270.7
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC-CCCC-CCcc---------------------------c
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-YERP-ALTK---------------------------G 99 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~-y~~~-~l~~---------------------------~ 99 (489)
+..+||+|||||+||++||.+|++.|. +|+|||+....+ -... .+-. .
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~ 83 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGA---RVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAA 83 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---EEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHh
Confidence 457899999999999999999999987 799999532111 0000 0000 0
Q ss_pred cCCCCCC-CCCCCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCe-EEeeCcEEecCCCCC
Q 011267 100 YLFPLDK-KPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK-LLKYGSLIVATGCTA 174 (489)
Q Consensus 100 ~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~-~i~yd~lvlATG~~~ 174 (489)
+-..... ...++..+..... ..........+++.+++++.+ .+..++.....+.+.+|. ++.||+||||||+.|
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p 162 (483)
T 3dgh_A 84 YGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRP 162 (483)
T ss_dssp TTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEE
T ss_pred cCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCc
Confidence 0000000 0000000000000 000000112345678998875 666777776677777774 799999999999988
Q ss_pred CCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHH
Q 011267 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (489)
Q Consensus 175 ~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~ 254 (489)
. .|.++|.+. ... +.+.+......+++++|||+|++|+|+|..|.++|.+|+++++. .+++ .+++++.+.
T Consensus 163 ~-~p~i~G~~~----~~~---~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~-~~d~~~~~~ 232 (483)
T 3dgh_A 163 R-YPDIPGAVE----YGI---TSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLR-GFDQQMAEL 232 (483)
T ss_dssp C-CCSSTTHHH----HCB---CHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSST-TSCHHHHHH
T ss_pred C-CCCCCCccc----ccC---cHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCc-ccCHHHHHH
Confidence 6 454444211 111 23333333345789999999999999999999999999999884 6666 479999999
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCc-----EEEcCEEEEccCCCCCCchh--hhcCCeecCCcEEe
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGS-----TIDADTIVIGIGAKPTVSPF--ERVGLNSSVGGIQV 327 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~-----~i~aD~vi~a~G~~p~~~~~--~~~gl~~~~g~i~v 327 (489)
+.+.+++.||++++ ++.|++++..+++.+ .|.+.+++ ++++|.||+|+|++|+++++ +.+|++.++|+|.|
T Consensus 233 l~~~l~~~Gv~i~~-~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i~v 310 (483)
T 3dgh_A 233 VAASMEERGIPFLR-KTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKIPV 310 (483)
T ss_dssp HHHHHHHTTCCEEE-TEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBBCC
T ss_pred HHHHHHhCCCEEEe-CCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEEEE
Confidence 99999999999999 999999986555544 46666543 79999999999999999886 88899887788999
Q ss_pred CCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCcCCceeeecccccCCCcceee
Q 011267 328 DGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWW 405 (489)
Q Consensus 328 d~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~ 405 (489)
|+++||+.|+|||+|||+... ...+..|..+|+.+|.||++.... .|..+|+. .|..+ .+
T Consensus 311 d~~~~t~~~~IyA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~~---~~~~p------~~ 372 (483)
T 3dgh_A 311 DSQEATNVANIYAVGDIIYGK---------PELTPVAVLAGRLLARRLYGGSTQRMDYKDVATT---VFTPL------EY 372 (483)
T ss_dssp CTTCBCSSTTEEECSTTBTTS---------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCEE---ECSSS------EE
T ss_pred CcCCccCCCCEEEEEcccCCC---------CccHHHHHHHHHHHHHHHcCCCCCcCCCCCCCEE---EECCC------cc
Confidence 999999999999999998521 125566999999999999975432 35556653 22211 13
Q ss_pred eeecCCcC---------cEE-EE----c--------cCCCcEEEEEEE---CCEEEEEEeccCCHHHhHHH-HHHHhcCC
Q 011267 406 QFFGDNVG---------ETI-EI----G--------NFDPKIATFWID---SGKLKGVLVESGSPEEFQLL-PTLARSQP 459 (489)
Q Consensus 406 ~~~G~~~~---------~~~-~~----~--------~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~-~~~~~~~~ 459 (489)
..+|.... ... .. . .....+.++.++ +++|+|+++++.++.++... ..+|.++.
T Consensus 373 a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~ 452 (483)
T 3dgh_A 373 ACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGL 452 (483)
T ss_dssp EEEECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTC
T ss_pred EEEeCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
Confidence 34444321 011 10 0 011336666554 48999999877777776655 45678888
Q ss_pred CCC--hhhhcCCCcHHHHHHHHHc
Q 011267 460 FVD--KAKLQQASSVEEALEIARA 481 (489)
Q Consensus 460 ~~~--~~~~~~~~~~~e~~~~~~~ 481 (489)
+++ ...++.|||++|++..+..
T Consensus 453 t~~~l~~~~~~hPt~~e~~~~~~~ 476 (483)
T 3dgh_A 453 TINTLINTVGIHPTTAEEFTRLAI 476 (483)
T ss_dssp BHHHHHTSCCCSSCSGGGGGGCCC
T ss_pred CHHHHhhcccCCCChHHHHHHHHh
Confidence 876 3446889999999987654
No 47
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1e-40 Score=345.20 Aligned_cols=394 Identities=21% Similarity=0.273 Sum_probs=272.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC---C---CC--------------CccccCCCCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---R---PA--------------LTKGYLFPLDKKPA 109 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~---~---~~--------------l~~~~~~~~~~~~~ 109 (489)
.++||+|||||+||++||.+|++.|. +|+|||++. .+.. + |. ....+-........
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 100 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGK---RVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIF 100 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcC---EEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCcc
Confidence 36899999999999999999999987 799999943 2110 0 00 00000000000000
Q ss_pred CCCCCcccc---CCCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeC-CCeEEeeCcEEecCCCCCCCCCCCCCCCC
Q 011267 110 RLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (489)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~-~g~~i~yd~lvlATG~~~~~~p~~~g~~~ 185 (489)
++....... ..........++++.+++++.+ ++..++. +.+.+. ++.++.||++|+|||+.|...|..+|..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~- 176 (484)
T 3o0h_A 101 NWEKLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVDE--HTLELSVTGERISAEKILIATGAKIVSNSAIKGSD- 176 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET--TEEEETTTCCEEEEEEEEECCCEEECCC--CBTGG-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeC--CEEEEecCCeEEEeCEEEEccCCCcccCCCCCCcc-
Confidence 000000000 0000001123445679999986 7777774 567776 7788999999999999876234444422
Q ss_pred CceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcE
Q 011267 186 PGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (489)
Q Consensus 186 ~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~ 265 (489)
.+... +.+......+++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++.+.+.+.+.+++.||+
T Consensus 177 -~~~~~------~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~ 248 (484)
T 3o0h_A 177 -LCLTS------NEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVAKGIS 248 (484)
T ss_dssp -GSBCT------TTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCE
T ss_pred -ccccH------HHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHHCCCE
Confidence 12111 122222245789999999999999999999999999999999998874 8999999999999999999
Q ss_pred EEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeCCCCCCCCCCeEEec
Q 011267 266 FVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVDGQFRTRMPGIFAIG 342 (489)
Q Consensus 266 ~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~G 342 (489)
+++ ++.|++++.++ +.+ .|.+.+|+++++|.||+|+|++|++++ ++.+|++.+ +|+|.||+++||+.|+|||+|
T Consensus 249 i~~-~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya~G 325 (484)
T 3o0h_A 249 IIY-EATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIWAVG 325 (484)
T ss_dssp EES-SCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEEECG
T ss_pred EEe-CCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEEEEE
Confidence 999 99999998643 344 688899999999999999999999987 788899886 467999999999999999999
Q ss_pred cccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCcCCceeeecccccCCCcceeeeeecCCcCc------
Q 011267 343 DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGE------ 414 (489)
Q Consensus 343 D~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~~------ 414 (489)
||+..+. .+..|..+|+.+|.||++.... .+..+|+. .|..+. +..+|....+
T Consensus 326 D~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~---~~~~p~------~a~vGlte~~a~~~g~ 386 (484)
T 3o0h_A 326 DVTGHIQ----------LTPVAIHDAMCFVKNAFENTSTTPDYDLITTA---VFSQPE------IGTVGLSEEDALHRYK 386 (484)
T ss_dssp GGGTSCC----------CHHHHHHHHHHHHHHHHC---CCCCCTTCCEE---ECCSSC------EEEEECCHHHHHHHCS
T ss_pred ecCCCCc----------CHHHHHHHHHHHHHHHcCCCCCcCCCCCCcEE---EECCCC------EEEeeCCHHHHHHcCC
Confidence 9997432 4566999999999999975433 34445542 333221 4556654321
Q ss_pred EEEE--c-----------cCCCcEEEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-hhhcCCCcHHHHH
Q 011267 415 TIEI--G-----------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKLQQASSVEEAL 476 (489)
Q Consensus 415 ~~~~--~-----------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~e~~ 476 (489)
-+.. . +....+.++.++ +++|+|++++..++.++... ..++..+.+++ . ..++.|||+.|++
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~ 466 (484)
T 3o0h_A 387 RVEIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEEL 466 (484)
T ss_dssp EEEEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGG
T ss_pred CEEEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHH
Confidence 0110 0 012346666665 59999999877777776655 45578888876 3 4468899999999
Q ss_pred HHHHc
Q 011267 477 EIARA 481 (489)
Q Consensus 477 ~~~~~ 481 (489)
..++.
T Consensus 467 ~~~~~ 471 (484)
T 3o0h_A 467 VTMYK 471 (484)
T ss_dssp GCCCS
T ss_pred HHHhh
Confidence 88763
No 48
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=3.1e-39 Score=336.29 Aligned_cols=401 Identities=19% Similarity=0.240 Sum_probs=269.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCccccC-------------------------C
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKGYL-------------------------F 102 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~-~l~~~~~-------------------------~ 102 (489)
+..+||+|||||+||++||..|++.|. +|+|||+++..++... .+-..++ +
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~ 106 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGK---KVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNY 106 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhc
Confidence 346899999999999999999999986 6999998653221110 0000000 0
Q ss_pred C--CC-CCCCCCCCCccccC---CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCe--EEeeCcEEecCCCCC
Q 011267 103 P--LD-KKPARLPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTA 174 (489)
Q Consensus 103 ~--~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~--~i~yd~lvlATG~~~ 174 (489)
. .. ....++........ ..........+++.+++++.+ ++..+++....+...+|+ ++.||+||||||++|
T Consensus 107 g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 107 GWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp TBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEE
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCc
Confidence 0 00 00000000000000 000000112345679999875 678888877777777775 799999999999998
Q ss_pred CCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHH
Q 011267 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (489)
Q Consensus 175 ~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~ 254 (489)
.. |.++|... ...+ .+.+......+++++|||+|++|+|+|..|+++|.+|+++++. .+++ .+++++.+.
T Consensus 186 ~~-p~i~G~~~----~~~t---~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~-~~d~~~~~~ 255 (519)
T 3qfa_A 186 RY-LGIPGDKE----YCIS---SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLR-GFDQDMANK 255 (519)
T ss_dssp CC-CCCTTHHH----HCBC---HHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSST-TSCHHHHHH
T ss_pred CC-CCCCCccC----ceEc---HHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cccc-cCCHHHHHH
Confidence 63 44444211 1112 3333333345788999999999999999999999999999985 6666 479999999
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCC---CcE-EEEEeCCC-c--EEEcCEEEEccCCCCCCch--hhhcCCeec--CC
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSD---GRV-AAVKLEDG-S--TIDADTIVIGIGAKPTVSP--FERVGLNSS--VG 323 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~---~~v-~~v~~~~g-~--~i~aD~vi~a~G~~p~~~~--~~~~gl~~~--~g 323 (489)
+.+.+++.||++++ ++.++++...++ +.+ ..+...+| + ++++|.||+|+|++|++++ ++.+|++.+ +|
T Consensus 256 ~~~~l~~~GV~v~~-~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G 334 (519)
T 3qfa_A 256 IGEHMEEHGIKFIR-QFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTG 334 (519)
T ss_dssp HHHHHHHTTCEEEE-SEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTC
T ss_pred HHHHHHHCCCEEEe-CCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCC
Confidence 99999999999999 988888764322 222 22334455 2 5789999999999999986 788899885 47
Q ss_pred cEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCC--CCCcCCceeeecccccCCCc
Q 011267 324 GIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTH--TYDYLPYFYSRVFEYEGSPR 401 (489)
Q Consensus 324 ~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~--~~~~~p~~~~~~~~~~~~~~ 401 (489)
+|.||+++||++|+|||+|||+... ...+..|..+|+.+|.||++.... .+..+|+ . .|..+-
T Consensus 335 ~I~Vd~~~~Ts~~~IyA~GD~~~g~---------~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~p~--~-~~~~p~--- 399 (519)
T 3qfa_A 335 KIPVTDEEQTNVPYIYAIGDILEDK---------VELTPVAIQAGRLLAQRLYAGSTVKCDYENVPT--T-VFTPLE--- 399 (519)
T ss_dssp CBCCCTTSBCSSTTEEECGGGBSSS---------CCCHHHHHHHHHHHHHHHHSCCCCCCCCTTCCE--E-ECSSSC---
T ss_pred eEeeCCCCccCCCCEEEEEeccCCC---------CccHHHHHHHHHHHHHHHcCCCCccCCCCcCcE--E-EECCCc---
Confidence 7999999999999999999999422 125667999999999999975432 3444554 2 232211
Q ss_pred ceeeeeecCCcC---------cEEE----Ec---------cCCCcEEEEEEE---CCEEEEEEeccCCHHHhHHH-HHHH
Q 011267 402 KVWWQFFGDNVG---------ETIE----IG---------NFDPKIATFWID---SGKLKGVLVESGSPEEFQLL-PTLA 455 (489)
Q Consensus 402 ~~~~~~~G~~~~---------~~~~----~~---------~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~-~~~~ 455 (489)
+..+|.... .... .. .....+.++.++ +++|+|++++..++.++... ..+|
T Consensus 400 ---~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai 476 (519)
T 3qfa_A 400 ---YGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAAL 476 (519)
T ss_dssp ---EEEEECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHH
T ss_pred ---eEEecCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHH
Confidence 445554321 0110 00 012346677664 48999999877777776655 4567
Q ss_pred hcCCCCC--hhhhcCCCcHHHHHHHHHcc
Q 011267 456 RSQPFVD--KAKLQQASSVEEALEIARAA 482 (489)
Q Consensus 456 ~~~~~~~--~~~~~~~~~~~e~~~~~~~~ 482 (489)
..+.+++ ...++.|||+.|++..+...
T Consensus 477 ~~~~t~~~l~~~~~~hPt~~E~~~~~~~~ 505 (519)
T 3qfa_A 477 KCGLTKKQLDSTIGIHPVCAEVFTTLSVT 505 (519)
T ss_dssp HTTCBHHHHHHSCCCTTCGGGGGGGCCCB
T ss_pred HCCCCHHHHhccccCCCChHHHHHHHHhh
Confidence 8888876 34468899999999887644
No 49
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=7.1e-40 Score=339.09 Aligned_cols=397 Identities=17% Similarity=0.142 Sum_probs=266.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC------C--------------CCccccCCCCCCCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER------P--------------ALTKGYLFPLDKKPAR 110 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~------~--------------~l~~~~~~~~~~~~~~ 110 (489)
++||+|||||+||++||.+|++.|. +|+|||+++. ...- | .....+-.+......+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~---~V~liE~~~~-GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 83 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTD---KVVLIEGGAY-GTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVN 83 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCS---CEEEEESSCS-SCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCC-CCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccC
Confidence 5899999999999999999999986 7999999752 1100 0 0000000000000000
Q ss_pred CCCCccccC---CCCCCCChhHHHHC-CcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCC
Q 011267 111 LPGFHTCVG---SGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLP 186 (489)
Q Consensus 111 ~~~~~~~~~---~~~~~~~~~~~~~~-~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~ 186 (489)
+..+..... ..........+... +++++.+ ++...+ .++|.+.++.++.||+||||||++|. .|..++...+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g-~a~~~~--~~~v~~~~~~~~~~d~lViATGs~p~-~p~~~~~~~~ 159 (492)
T 3ic9_A 84 GKAVMKRIQTERDRFVGFVVESVESFDEQDKIRG-FAKFLD--EHTLQVDDHSQVIAKRIVIATGSRPN-YPEFLAAAGS 159 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEES-CEEEEE--TTEEEETTTEEEEEEEEEECCCEECC-CCHHHHTTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEE-EEEEec--CCEEEEcCCcEEEeCEEEEccCCCCc-CCCCCCccCC
Confidence 000000000 00000000111111 3445543 333333 46888888899999999999999987 3443332223
Q ss_pred ceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEE
Q 011267 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 266 (489)
Q Consensus 187 gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~ 266 (489)
.+++ ++.+......+++++|||+|++|+|+|..|.++|.+|+++++.+++++ .+++++.+.+.+.+++. |++
T Consensus 160 ~v~t------~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-~~d~~~~~~l~~~l~~~-V~i 231 (492)
T 3ic9_A 160 RLLT------NDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN-LQDEEMKRYAEKTFNEE-FYF 231 (492)
T ss_dssp GEEC------HHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT-CCCHHHHHHHHHHHHTT-SEE
T ss_pred cEEc------HHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-cCCHHHHHHHHHHHhhC-cEE
Confidence 3332 333433344689999999999999999999999999999999999987 48999999999999988 999
Q ss_pred EEcCceEEEEEeCCCCcEEEEEeC--CC--cEEEcCEEEEccCCCCCCch--hhhcCCeec-CCcEEeC-CCCCCCCCCe
Q 011267 267 VKVGASIKNLEAGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSP--FERVGLNSS-VGGIQVD-GQFRTRMPGI 338 (489)
Q Consensus 267 ~~~~~~v~~i~~~~~~~v~~v~~~--~g--~~i~aD~vi~a~G~~p~~~~--~~~~gl~~~-~g~i~vd-~~~~t~~~~I 338 (489)
++ ++.|++++..+ +.+ .+.+. +| +++++|.||+|+|++|++++ ++.+|++.+ +|.|.|| +++||+.|+|
T Consensus 232 ~~-~~~v~~i~~~~-~~v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~I 308 (492)
T 3ic9_A 232 DA-KARVISTIEKE-DAV-EVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHI 308 (492)
T ss_dssp ET-TCEEEEEEECS-SSE-EEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTE
T ss_pred EE-CCEEEEEEEcC-CEE-EEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCE
Confidence 99 99999998643 343 35554 67 67999999999999999998 788999886 5779999 8999999999
Q ss_pred EEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcC-CCC--CCCcCCceeeecccccCCCcceeeeeecCCcC--
Q 011267 339 FAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSA-QTH--TYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVG-- 413 (489)
Q Consensus 339 ya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~-~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~~~-- 413 (489)
||+|||+..+. .+..|..+|+.+|.||++. ... .+..+|+ ..|..+ .+..+|....
T Consensus 309 yA~GD~~~~~~----------~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~---~~~~~p------~~a~vGlte~~a 369 (492)
T 3ic9_A 309 FVAGDANNTLT----------LLHEAADDGKVAGTNAGAYPVIAQGQRRAPLS---VVFTEP------QVASVGLSLRQI 369 (492)
T ss_dssp EECGGGGTSSC----------SHHHHHHHHHHHHHHHHHTTSCCEECCCCCEE---EECSSS------EEEEEESCHHHH
T ss_pred EEEEecCCCCc----------cHHHHHHHHHHHHHHHcCCCCCcccCCCCCcE---EEECCC------CeEEecCCHHHH
Confidence 99999997532 4567999999999999862 222 2233333 222211 1334444321
Q ss_pred ----------cEE-EEc-----------cCCCcEEEEEEE--CCEEEEEEeccCCHHHhHHH-HHHHhcCCCCC-h-hhh
Q 011267 414 ----------ETI-EIG-----------NFDPKIATFWID--SGKLKGVLVESGSPEEFQLL-PTLARSQPFVD-K-AKL 466 (489)
Q Consensus 414 ----------~~~-~~~-----------~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~ 466 (489)
... ..- .....+.++.++ +++|+|+++++.++.++... ..++..+.+++ . ..+
T Consensus 370 ~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~ 449 (492)
T 3ic9_A 370 EDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMP 449 (492)
T ss_dssp HHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSC
T ss_pred HhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC
Confidence 010 000 012346666664 59999999977788777655 45678888876 2 446
Q ss_pred cCCCcHHHHHHHHHccCCc
Q 011267 467 QQASSVEEALEIARAALPV 485 (489)
Q Consensus 467 ~~~~~~~e~~~~~~~~~~~ 485 (489)
+.|||+.|+++.|++++.+
T Consensus 450 ~~hPt~~e~~~~a~~~~~~ 468 (492)
T 3ic9_A 450 FYHPVIEEGLRTALRDAQQ 468 (492)
T ss_dssp CCTTCTHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHH
Confidence 8899999999999887544
No 50
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=4.5e-40 Score=340.12 Aligned_cols=300 Identities=21% Similarity=0.280 Sum_probs=227.6
Q ss_pred cCCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCC
Q 011267 46 SFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQ 125 (489)
Q Consensus 46 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (489)
|...++++|||||||+||+++|++|++.++ +|||||+++++.|. |.|+. .... .-.+..+ ...
T Consensus 37 p~~~~KprVVIIGgG~AGl~~A~~L~~~~~---~VtLId~~~~~~~~-PlL~~-va~G-~l~~~~i-----------~~p 99 (502)
T 4g6h_A 37 PQHSDKPNVLILGSGWGAISFLKHIDTKKY---NVSIISPRSYFLFT-PLLPS-APVG-TVDEKSI-----------IEP 99 (502)
T ss_dssp CCSCSSCEEEEECSSHHHHHHHHHSCTTTC---EEEEEESSSEEECG-GGGGG-TTTT-SSCGGGG-----------EEE
T ss_pred CCCCCCCCEEEECCcHHHHHHHHHhhhCCC---cEEEECCCCCcccc-cchhH-Hhhc-cccHHHh-----------hhh
Confidence 345567899999999999999999987654 89999999987664 55542 1111 0000000 000
Q ss_pred ChhHH--HHCCcEEEeCCcEEEEeCCCCEEEeC--------------------CCeEEeeCcEEecCCCCCCCCCCCCCC
Q 011267 126 TPEWY--KEKGIEMIYQDPVTSIDIEKQTLITN--------------------SGKLLKYGSLIVATGCTASRFPEKIGG 183 (489)
Q Consensus 126 ~~~~~--~~~~i~~~~~~~V~~id~~~~~v~~~--------------------~g~~i~yd~lvlATG~~~~~~p~~~g~ 183 (489)
..... .+.+++++.+ +|+.||+++++|++. ++.+++||+||||||+.+.. +.+||.
T Consensus 100 ~~~~~~~~~~~v~~~~~-~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~-~~ipG~ 177 (502)
T 4g6h_A 100 IVNFALKKKGNVTYYEA-EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNT-FGIPGV 177 (502)
T ss_dssp HHHHHTTCSSCEEEEEE-EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECC-TTCTTH
T ss_pred HHHHHHhhcCCeEEEEE-EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccccc-CCccCc
Confidence 11222 2357888874 899999999988763 46689999999999999874 444443
Q ss_pred CCCceEeecCHHHHHHHHHhhc-----------------CCCcEEEECCCHHHHHHHHHHHhCC--------------Cc
Q 011267 184 YLPGVHYIRDVADADALISSLE-----------------KAKKVVVVGGGYIGMEVAAAAVGWK--------------LD 232 (489)
Q Consensus 184 ~~~gv~~~~~~~~~~~~~~~~~-----------------~~~~vvViG~G~~g~e~A~~l~~~g--------------~~ 232 (489)
. +..+.++++.++.++++.+. ...+++|||||++|+|+|..|.+++ .+
T Consensus 178 ~-e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~ 256 (502)
T 4g6h_A 178 T-DYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQ 256 (502)
T ss_dssp H-HHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCE
T ss_pred c-cccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccce
Confidence 2 23467889888877765431 1236999999999999999987643 57
Q ss_pred EEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCc----EEEcCEEEEccCCCC
Q 011267 233 TTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKP 308 (489)
Q Consensus 233 V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~----~i~aD~vi~a~G~~p 308 (489)
|+++++.+++++ .+++.+++.+.+.|+++||++++ ++.|++++ +++.+......+|+ +|+||.||||+|++|
T Consensus 257 V~lve~~~~il~-~~~~~~~~~~~~~L~~~GV~v~~-~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 257 IHLVEALPIVLN-MFEKKLSSYAQSHLENTSIKVHL-RTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGNKA 332 (502)
T ss_dssp EEEECSSSSSST-TSCHHHHHHHHHHHHHTTCEEET-TEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCEEC
T ss_pred eEEecccccccc-CCCHHHHHHHHHHHHhcceeeec-CceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCCcC
Confidence 999999999998 48999999999999999999999 99999996 34444455667764 699999999999999
Q ss_pred CC---chhhhcCCeec-CCcEEeCCCCCC-CCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011267 309 TV---SPFERVGLNSS-VGGIQVDGQFRT-RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 309 ~~---~~~~~~gl~~~-~g~i~vd~~~~t-~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
+. ++...++...+ +|+|.||++||| ++|||||+|||+..+.+. ..+.|.+||+.+|+||.+
T Consensus 333 ~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~--------~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 333 RPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPP--------TAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp CHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCC--------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCCC--------chHHHHHHHHHHHHHHHH
Confidence 82 33455566554 578999999999 899999999999866532 567799999999999853
No 51
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=7.2e-41 Score=341.75 Aligned_cols=330 Identities=18% Similarity=0.168 Sum_probs=235.2
Q ss_pred ccccceeeeeecceec--CCCCCceeee---ccccccccccccccc------ccc---CCCCCCcEEEEcCchHHHHHHH
Q 011267 3 SVSNSLSFKHGLSLWC--PQSPSLHRIR---HSSAKNFQRRGFVVA------YSS---FANENREFVIVGGGNAAGYAAR 68 (489)
Q Consensus 3 ~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~------~~~---~~~~~~~vvIIGgG~AGl~aA~ 68 (489)
..+||||++|||+|+. +|+++|.++. +++++....++..+. ..+ ...+.+||+|||||+||++||.
T Consensus 60 ~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~ 139 (456)
T 2vdc_G 60 QATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAE 139 (456)
T ss_dssp HHHCSCHHHHHHHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHH
T ss_pred HhhCCCCccccccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHH
Confidence 5689999999999999 9999999975 566666666665432 211 2245789999999999999999
Q ss_pred HHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHHHHCCcEEEeCCcEEEEeC
Q 011267 69 TFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDI 148 (489)
Q Consensus 69 ~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~ 148 (489)
.|++.|+ +|+|+|+++..... +. +-.+. .+++. ....+..+++++.+++++.++.|.
T Consensus 140 ~L~~~G~---~V~v~e~~~~~GG~---l~--~gip~----~~~~~-------~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 140 ELRAKGY---EVHVYDRYDRMGGL---LV--YGIPG----FKLEK-------SVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp HHHHHTC---CEEEECSSSSCSTH---HH--HTSCT----TTSCH-------HHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred HHHHCCC---eEEEEeccCCCCCe---ee--ecCCC----ccCCH-------HHHHHHHHHHHHCCcEEEeCCEec----
Confidence 9999987 69999998654211 00 00110 01110 001223466788899999986542
Q ss_pred CCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHH--H----------hhcCCCcEEEECCC
Q 011267 149 EKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALI--S----------SLEKAKKVVVVGGG 216 (489)
Q Consensus 149 ~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~--~----------~~~~~~~vvViG~G 216 (489)
+.+.++++. +.||+||+|||+.+...+.++|.+.++++...++....... . ....+++|+|||+|
T Consensus 197 --~~v~~~~~~-~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG 273 (456)
T 2vdc_G 197 --RDASLPELR-RKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGG 273 (456)
T ss_dssp --TTBCHHHHH-SSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSS
T ss_pred --cEEEhhHhH-hhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCC
Confidence 223333332 57999999999974334566777778877643332222111 1 01357899999999
Q ss_pred HHHHHHHHHHHhCCCc-EEEEccCCcc-hhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC----
Q 011267 217 YIGMEVAAAAVGWKLD-TTIIFPENHL-LQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE---- 290 (489)
Q Consensus 217 ~~g~e~A~~l~~~g~~-V~lv~~~~~~-l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~---- 290 (489)
.+|+|+|..+.+.|.+ |+++++++++ ++. .+.+ .+.+++.||++++ ++.++++.. ++++.++++.
T Consensus 274 ~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~-~~~e-----~~~~~~~Gv~~~~-~~~~~~i~~--~g~v~~v~~~~~~~ 344 (456)
T 2vdc_G 274 DTAMDCVRTAIRQGATSVKCLYRRDRKNMPG-SQRE-----VAHAEEEGVEFIW-QAAPEGFTG--DTVVTGVRAVRIHL 344 (456)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSSCSTTCSS-CHHH-----HHHHHHTTCEEEC-CSSSCCEEE--EEEEETTEEEEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEEeCCccCCCC-CHHH-----HHHHHHCCCEEEe-CCCceEEeC--CCcEEEEEEEEEEe
Confidence 9999999999999984 9999998865 443 2222 2457788999999 999988873 3433222221
Q ss_pred --------------CC--cEEEcCEEEEccCCCCCCc--hhhhcCCeec-CCcEEeCCC-CCCCCCCeEEeccccccCCc
Q 011267 291 --------------DG--STIDADTIVIGIGAKPTVS--PFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLK 350 (489)
Q Consensus 291 --------------~g--~~i~aD~vi~a~G~~p~~~--~~~~~gl~~~-~g~i~vd~~-~~t~~~~Iya~GD~a~~~~~ 350 (489)
+| ++++||.||+|+|+.|++. +++.++++.+ +|+|.||++ ++|+.|+|||+|||+..+.
T Consensus 345 ~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~~- 423 (456)
T 2vdc_G 345 GVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGAS- 423 (456)
T ss_dssp EEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSCC-
T ss_pred cccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCch-
Confidence 23 4799999999999999876 7888899876 578999997 9999999999999997543
Q ss_pred cCCcccccccHHHHHHHHHHHHHHHhc
Q 011267 351 MYDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 351 ~~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.+..|+.+|+.+|.+|..
T Consensus 424 ---------~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 424 ---------LVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp ---------SHHHHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHHHHHH
Confidence 456688899999888863
No 52
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=3.7e-38 Score=334.34 Aligned_cols=401 Identities=17% Similarity=0.219 Sum_probs=264.7
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCcccc----------C---------------C
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKGY----------L---------------F 102 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~-~l~~~~----------~---------------~ 102 (489)
...+||+|||||+||++||.+|++.|. +|+|||+....+.... .+...+ + +
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~---~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~ 181 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGA---KTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF 181 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccEEEECCCccHHHHHHHHHhCCC---eEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC
Confidence 456899999999999999999999986 7999997422111100 000000 0 0
Q ss_pred CCC--C--CCCCCCCCccccCCC---CCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCC--eEEeeCcEEecCCCC
Q 011267 103 PLD--K--KPARLPGFHTCVGSG---GERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCT 173 (489)
Q Consensus 103 ~~~--~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~i~yd~lvlATG~~ 173 (489)
... . ...++..+....... ........+...+++++.+ .+..++.....+...+| .++.||+||||||++
T Consensus 182 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~ 260 (598)
T 2x8g_A 182 GWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKIILATGER 260 (598)
T ss_dssp TCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEEECCCEE
T ss_pred CccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCC
Confidence 000 0 000000000000000 0000011234568888865 66677766555555667 468999999999998
Q ss_pred CCCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHH
Q 011267 174 ASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQ 253 (489)
Q Consensus 174 ~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~ 253 (489)
|+ .|.++|... +.+ +.+.+......+++++|||+|++|+|+|..|+++|.+|+++++. .+++ .+++++.+
T Consensus 261 p~-~p~i~G~~~---~~~----~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~-~~d~~~~~ 330 (598)
T 2x8g_A 261 PK-YPEIPGAVE---YGI----TSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLR-GFDQQMAE 330 (598)
T ss_dssp EC-CCSSTTHHH---HCE----EHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSST-TSCHHHHH
T ss_pred CC-CCCCCCccc---ceE----cHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcC-cCCHHHHH
Confidence 86 444444211 111 12333332345789999999999999999999999999999988 6666 48999999
Q ss_pred HHHHHHHhcCcEEEEcCceEEEEEeC-----CC---CcE-EEEEeCCCcEEE--cCEEEEccCCCCCCch--hhhcCCee
Q 011267 254 RYEQLYQQNGVKFVKVGASIKNLEAG-----SD---GRV-AAVKLEDGSTID--ADTIVIGIGAKPTVSP--FERVGLNS 320 (489)
Q Consensus 254 ~l~~~l~~~Gv~~~~~~~~v~~i~~~-----~~---~~v-~~v~~~~g~~i~--aD~vi~a~G~~p~~~~--~~~~gl~~ 320 (489)
.+.+.+++.||++++ ++.++++... ++ +.+ ..+.+.+|++++ +|.||+|+|++|++++ ++.+|++.
T Consensus 331 ~~~~~l~~~gv~i~~-~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~ 409 (598)
T 2x8g_A 331 KVGDYMENHGVKFAK-LCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKL 409 (598)
T ss_dssp HHHHHHHHTTCEEEE-TEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCB
T ss_pred HHHHHHHhCCCEEEE-CCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceE
Confidence 999999999999999 9988888532 11 333 223356777655 9999999999999987 57888887
Q ss_pred c-CCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCC--CCCCcCCceeeeccccc
Q 011267 321 S-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQT--HTYDYLPYFYSRVFEYE 397 (489)
Q Consensus 321 ~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~--~~~~~~p~~~~~~~~~~ 397 (489)
+ +|+|.||+++||+.|+|||+|||+... ...+..|..+|+.+|.+|++... ..|..+|+.+ |..+
T Consensus 410 ~~~G~i~vd~~~~ts~~~VyA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~---~~~~ 477 (598)
T 2x8g_A 410 DKNGRVVCTDDEQTTVSNVYAIGDINAGK---------PQLTPVAIQAGRYLARRLFAGATELTDYSNVATTV---FTPL 477 (598)
T ss_dssp CTTSCBCCCTTSBCSSTTEEECGGGBTTS---------CCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEE---CSSS
T ss_pred CCCCcEEeCCCCcCCCCCEEEEeeecCCC---------CccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEE---ECCC
Confidence 6 577999999999999999999997532 12556799999999999997543 2355566532 2211
Q ss_pred CCCcceeeeeecCCcC---------cEEEE------------c-cCCCcEEEEEEE---CCEEEEEEeccCCHHHhHHH-
Q 011267 398 GSPRKVWWQFFGDNVG---------ETIEI------------G-NFDPKIATFWID---SGKLKGVLVESGSPEEFQLL- 451 (489)
Q Consensus 398 ~~~~~~~~~~~G~~~~---------~~~~~------------~-~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~- 451 (489)
- +..+|.... ..... . +....+.++.++ +++|+|+++++.++.++...
T Consensus 478 ~------~a~vGl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~ 551 (598)
T 2x8g_A 478 E------YGACGLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGY 551 (598)
T ss_dssp C------EEEEECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHH
T ss_pred c------eEEEeCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHH
Confidence 1 334443211 01110 0 012346676664 69999999866667776655
Q ss_pred HHHHhcCCCCC--hhhhcCCCcHHHHHHHHHcc
Q 011267 452 PTLARSQPFVD--KAKLQQASSVEEALEIARAA 482 (489)
Q Consensus 452 ~~~~~~~~~~~--~~~~~~~~~~~e~~~~~~~~ 482 (489)
..+|..+.+++ ...++.|||+.|++..++..
T Consensus 552 ~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~~ 584 (598)
T 2x8g_A 552 AVAIKMGATKADFDRTIGIHPTCSETFTTLHVT 584 (598)
T ss_dssp HHHHHTTCBHHHHHHSCCCSSCSGGGGGSCCCB
T ss_pred HHHHHcCCCHHHHhhccccCCCHHHHHHHHHHh
Confidence 45678888876 34468899999999988863
No 53
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=3.7e-39 Score=359.31 Aligned_cols=349 Identities=17% Similarity=0.177 Sum_probs=244.9
Q ss_pred cccccceeeeeecceec--CCCCCceeee---cccccccccccccccc---------cc--------CCCCCCcEEEEcC
Q 011267 2 ASVSNSLSFKHGLSLWC--PQSPSLHRIR---HSSAKNFQRRGFVVAY---------SS--------FANENREFVIVGG 59 (489)
Q Consensus 2 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~--------~~~~~~~vvIIGg 59 (489)
...+||||++|||+|+. +|.++|+++. +++++....|+..+.. .+ +..+.+||+||||
T Consensus 116 ~~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGg 195 (1025)
T 1gte_A 116 IFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGA 195 (1025)
T ss_dssp HHHHCTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECC
T ss_pred HHhcCChhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEEEECc
Confidence 35689999999999998 9999999965 5777777777776631 11 0123679999999
Q ss_pred chHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHHHHCCcEEEe
Q 011267 60 GNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIY 139 (489)
Q Consensus 60 G~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 139 (489)
|+||++||.+|++.|+ . +|+|+|+++..... +. +-.+. ..++. .......+++++.|++++.
T Consensus 196 GpAGl~aA~~L~~~G~-~-~Vtv~E~~~~~GG~---~~--~~ip~----~~~~~-------~~~~~~~~~~~~~gv~~~~ 257 (1025)
T 1gte_A 196 GPASISCASFLARLGY-S-DITIFEKQEYVGGL---ST--SEIPQ----FRLPY-------DVVNFEIELMKDLGVKIIC 257 (1025)
T ss_dssp SHHHHHHHHHHHHTTC-C-CEEEEESSSSCSTH---HH--HTSCT----TTSCH-------HHHHHHHHHHHTTTCEEEE
T ss_pred cHHHHHHHHHHHhcCC-C-cEEEEeCCCCCCcc---cc--ccCCc----ccCCH-------HHHHHHHHHHHHCCcEEEc
Confidence 9999999999999987 2 69999997654321 00 00000 01100 0001224567888999999
Q ss_pred CCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCC-CCCCCCCCCCC-CCceEeecCHHHHHHHHHh----------hcCC
Q 011267 140 QDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCT-ASRFPEKIGGY-LPGVHYIRDVADADALISS----------LEKA 207 (489)
Q Consensus 140 ~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~-~~~~p~~~g~~-~~gv~~~~~~~~~~~~~~~----------~~~~ 207 (489)
++.+. .+.++++++.++.||+||||||+. |+.++..+|.. .+++++..++......... ...+
T Consensus 258 ~~~v~-----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~ 332 (1025)
T 1gte_A 258 GKSLS-----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIR 332 (1025)
T ss_dssp SCCBS-----TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCC
T ss_pred ccEec-----cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccC
Confidence 86652 134555555567899999999994 76554333422 3566654332211111000 1235
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-cEEEEccCCc-chhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH-LLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVA 285 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~-~V~lv~~~~~-~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~ 285 (489)
++|+|||||.+|+|+|..+.++|. +|+++++.++ +++ .+++++ +.+++.||++++ ++.++++.. +++++.
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~-~~~~e~-----~~~~~~Gv~~~~-~~~~~~i~~-~~g~v~ 404 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIR-AVPEEV-----ELAKEEKCEFLP-FLSPRKVIV-KGGRIV 404 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCC-SCHHHH-----HHHHHTTCEEEC-SEEEEEEEE-ETTEEE
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCC-CCHHHH-----HHHHHcCCEEEe-CCCceEEEc-cCCeEE
Confidence 799999999999999999999996 8999999884 444 344443 457788999999 999999975 356666
Q ss_pred EEEeC------CC---------cEEEcCEEEEccCCCCC-Cchhhh-cCCeec-CCcEEeCC-CCCCCCCCeEEeccccc
Q 011267 286 AVKLE------DG---------STIDADTIVIGIGAKPT-VSPFER-VGLNSS-VGGIQVDG-QFRTRMPGIFAIGDVAA 346 (489)
Q Consensus 286 ~v~~~------~g---------~~i~aD~vi~a~G~~p~-~~~~~~-~gl~~~-~g~i~vd~-~~~t~~~~Iya~GD~a~ 346 (489)
.|++. +| +++++|.||+|+|++|+ ..++++ .|++.+ +|.|.||+ ++||+.|+|||+|||+.
T Consensus 405 ~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~ 484 (1025)
T 1gte_A 405 AVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVG 484 (1025)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGC
T ss_pred EEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCC
Confidence 66553 22 36999999999999864 566666 488886 57799997 89999999999999997
Q ss_pred cCCccCCcccccccHHHHHHHHHHHHHHHhc------C-CCCCCCcCCceee
Q 011267 347 FPLKMYDRTARVEHVDHARQSAQHCIKALLS------A-QTHTYDYLPYFYS 391 (489)
Q Consensus 347 ~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~------~-~~~~~~~~p~~~~ 391 (489)
.+. .+..|..+|+.+|.+|.+ + ....+...||+|+
T Consensus 485 ~~~----------~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ 526 (1025)
T 1gte_A 485 MAN----------TTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYT 526 (1025)
T ss_dssp SCC----------CHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCC
T ss_pred Cch----------HHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCcccccc
Confidence 543 344577888888888863 1 2224577899998
No 54
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.5e-37 Score=297.64 Aligned_cols=293 Identities=22% Similarity=0.310 Sum_probs=207.8
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
+...||||||||||||++||.+|++.|+ +|+|||++.. .-. ++... ....+|++....+.+......
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~~g~---~V~liE~~~~--gG~------~~~~~--~i~~~p~~~~~~~~~~~~~~~ 69 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASRANL---KTVMIERGIP--GGQ------MANTE--EVENFPGFEMITGPDLSTKMF 69 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT--TGG------GGGCS--CBCCSTTCSSBCHHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCC--CCe------eeccc--ccCCcCCccccchHHHHHHHH
Confidence 3457999999999999999999999987 6999998632 110 11000 001122221111111112223
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCC---CceEeecCHHHHHHHHHhh
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~---~gv~~~~~~~~~~~~~~~~ 204 (489)
.++.+.+..+..+..+...+.....+...++.++.||+||||||++|+. |.+||.+. .++++. .......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~-~~ipG~~~~~~~~v~~~------~~~~~~~ 142 (312)
T 4gcm_A 70 EHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKK-IGVPGEQELGGRGVSYC------AVCDGAF 142 (312)
T ss_dssp HHHHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECC-CCCTTTTTTBTTTEESC------HHHHGGG
T ss_pred HHHhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCc-CCCCChhhhCCccEEee------eccCccc
Confidence 4556677888887777777777778888889999999999999999874 55566432 233332 1122234
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCc-
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGR- 283 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~- 283 (489)
..+++++|||+|++|+|+|..|+++|.+|+++++.+++++... ...+.+++.++.... ...+......+...
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 215 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRI------LQDRAFKNDKIDFIW-SHTLKSINEKDGKVG 215 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHH------HHHHHHHCTTEEEEC-SEEEEEEEEETTEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchh------HHHHHHHhcCcceee-ecceeeeeccccccc
Confidence 5689999999999999999999999999999999998876421 223556778888887 77666665332211
Q ss_pred -EEEEEeC--CCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCccccccc
Q 011267 284 -VAAVKLE--DGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEH 360 (489)
Q Consensus 284 -v~~v~~~--~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~ 360 (489)
....... ++..+++|.|++++|..|++.+++..++..++|+|.||+++|||+|+|||+|||+..+.. .
T Consensus 216 ~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~~---------~ 286 (312)
T 4gcm_A 216 SVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLR---------Q 286 (312)
T ss_dssp EEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCSSTTEEECSTTBSCSCC---------S
T ss_pred cceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccCCCCEEEEeecCCCcch---------H
Confidence 1111122 335799999999999999999999999988888899999999999999999999864321 3
Q ss_pred HHHHHHHHHHHHHHHh
Q 011267 361 VDHARQSAQHCIKALL 376 (489)
Q Consensus 361 ~~~A~~~g~~~a~~l~ 376 (489)
+..|..+|+.||.++.
T Consensus 287 ~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 287 IVTATGDGSIAAQSAA 302 (312)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4558889999988875
No 55
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.1e-37 Score=304.10 Aligned_cols=298 Identities=19% Similarity=0.260 Sum_probs=219.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChh
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (489)
++++||+|||||+||+++|.+|++.|+ +|+|||+++........ ..+ .......++++............+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 73 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGL---SFRFVDPLPEPGGQLTA-----LYP-EKYIYDVAGFPKVYAKDLVKGLVE 73 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSCHHHHH-----TCT-TSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCeeec-----cCC-CceeeccCCCCCCCHHHHHHHHHH
Confidence 356899999999999999999999876 79999998754311000 000 000011111110000000111223
Q ss_pred HHHHCCcEEEeCCcEEEEeCCC--CEEEeCCCeEEeeCcEEecCCCC---CCCCCCCCCCC-C--CceEe-ecCHHHHHH
Q 011267 129 WYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCT---ASRFPEKIGGY-L--PGVHY-IRDVADADA 199 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~~--~~v~~~~g~~i~yd~lvlATG~~---~~~~p~~~g~~-~--~gv~~-~~~~~~~~~ 199 (489)
.+++.+++++.+++|..++.+. ..+.+.+|.++.||+||+|||+. |. .+..+|.. . .++++ +++..
T Consensus 74 ~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~-~~~i~g~~~~~~~~~~~~~~~~~---- 148 (335)
T 2zbw_A 74 QVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPR-RIGAPGEREFEGRGVYYAVKSKA---- 148 (335)
T ss_dssp HHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEEC-CCCCTTTTTTBTTTEESSCSCGG----
T ss_pred HHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCC-CCCCCChhhccCcEEEEecCchh----
Confidence 4456789999899999998764 35777788889999999999994 44 33344432 1 12322 22221
Q ss_pred HHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeC
Q 011267 200 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAG 279 (489)
Q Consensus 200 ~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~ 279 (489)
...+++++|||+|.+|+|+|..|.+.|.+|+++++.+++++ .+...+.+.+.+++.||++++ ++.|+++..
T Consensus 149 ----~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~-~~~v~~i~~- 219 (335)
T 2zbw_A 149 ----EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLT-PYELRRVEG- 219 (335)
T ss_dssp ----GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEET-TEEEEEEEE-
T ss_pred ----hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEec-CCcceeEcc-
Confidence 12578999999999999999999999999999999988765 356778888899999999999 999999985
Q ss_pred CCCcEEEEEeC---CC--cEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCc
Q 011267 280 SDGRVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354 (489)
Q Consensus 280 ~~~~v~~v~~~---~g--~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~ 354 (489)
++++..|.+. +| +++++|.||+|+|++|+++++++++++.++|++.||+++||+.|+|||+|||+..+..
T Consensus 220 -~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~---- 294 (335)
T 2zbw_A 220 -DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMATSIPGVYACGDIVTYPGK---- 294 (335)
T ss_dssp -SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBCSSTTEEECSTTEECTTC----
T ss_pred -CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCCCCCCEEEeccccccCcc----
Confidence 3555567765 67 5799999999999999999999999988778899999999999999999999986532
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 011267 355 TARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 355 ~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
...+..|..+|..+|.+|.+
T Consensus 295 ---~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 295 ---LPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHH
T ss_pred ---hhhhhhhHHHHHHHHHHHHH
Confidence 23667788999999999875
No 56
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=3.2e-37 Score=307.17 Aligned_cols=299 Identities=22% Similarity=0.335 Sum_probs=219.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChh
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (489)
++++||+|||||+||+++|..|++.|+ +|+|||+++....... .+.+ .......++++............+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 82 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNI---SCRIIESMPQLGGQLA-----ALYP-EKHIYDVAGFPEVPAIDLVESLWA 82 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHH-----HTCT-TSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccc-----ccCC-CcccccCCCCCCCCHHHHHHHHHH
Confidence 346899999999999999999999876 7999999865421100 0000 000011111110000000111223
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCC---EEEeCCCeEEeeCcEEecCCCC---CCCCCCCCC-C-CCC--ceEe-ecCHHHH
Q 011267 129 WYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCT---ASRFPEKIG-G-YLP--GVHY-IRDVADA 197 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~~~---~v~~~~g~~i~yd~lvlATG~~---~~~~p~~~g-~-~~~--gv~~-~~~~~~~ 197 (489)
.+++.+++++.+++|+.++.... .|.+.+|.++.||+||+|||+. |. .+.++| . ... ++++ +++..
T Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~-~~~i~g~~~~~~~~~v~~~~~~~~-- 159 (360)
T 3ab1_A 83 QAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPR-KLPQLGNIDHLTGSSVYYAVKSVE-- 159 (360)
T ss_dssp HHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBC-CCGGGCCCTTTBTTTEESSCSCGG--
T ss_pred HHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCC-CCCCCCchhhCcCceEEEecCCHH--
Confidence 44567899999999999987643 7888888889999999999994 43 233444 2 222 2332 22221
Q ss_pred HHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEE
Q 011267 198 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277 (489)
Q Consensus 198 ~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~ 277 (489)
...+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+++. +...+.+.+.+++.||++++ +++|+++.
T Consensus 160 ------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~---~~~~~~l~~~~~~~gv~i~~-~~~v~~i~ 229 (360)
T 3ab1_A 160 ------DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH---GKTAHEVERARANGTIDVYL-ETEVASIE 229 (360)
T ss_dssp ------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC---SHHHHSSHHHHHHTSEEEES-SEEEEEEE
T ss_pred ------HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC---HHHHHHHHHHhhcCceEEEc-CcCHHHhc
Confidence 125789999999999999999999999999999999877652 35667788888899999999 99999998
Q ss_pred eCCCCcEEEEEeC--CC--cEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCC
Q 011267 278 AGSDGRVAAVKLE--DG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYD 353 (489)
Q Consensus 278 ~~~~~~v~~v~~~--~g--~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~ 353 (489)
.+ ++++..|.+. +| +++++|.||+|+|++|++++++.++++.++|++.||+++||++|+|||+|||+..+..
T Consensus 230 ~~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~--- 305 (360)
T 3ab1_A 230 ES-NGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGK--- 305 (360)
T ss_dssp EE-TTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBCSSTTEEECSTTEECTTC---
T ss_pred cC-CCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcCCCCCEEEecCccCCCCc---
Confidence 54 4555566664 77 5799999999999999999999999988778899999999999999999999986532
Q ss_pred cccccccHHHHHHHHHHHHHHHhc
Q 011267 354 RTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 354 ~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
...+..|..+|..+|.+|.+
T Consensus 306 ----~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 306 ----LKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHH
T ss_pred ----cceeehhHHHHHHHHHHHHh
Confidence 23667788999999999875
No 57
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=7e-37 Score=300.81 Aligned_cols=293 Identities=17% Similarity=0.235 Sum_probs=213.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+++||+|||||+||++||..|++.|+ +|+|||+++....... ..++ ......+++++............++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gG~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQA---SVKIIESLPQLGGQLS-----ALYP-EKYIYDVAGFPKIRAQELINNLKEQ 76 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHH-----HHCT-TSEECCSTTCSSEEHHHHHHHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCCCceeh-----hcCC-CceEeccCCCCCCCHHHHHHHHHHH
Confidence 45799999999999999999999876 7999999876431100 0000 0001111211111000011122344
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC---EEEeCCCeEEeeCcEEecCCC---CCCCCCCCCCCCC---CceEeecCHHHHHHH
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGC---TASRFPEKIGGYL---PGVHYIRDVADADAL 200 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~---~v~~~~g~~i~yd~lvlATG~---~~~~~p~~~g~~~---~gv~~~~~~~~~~~~ 200 (489)
+++.+++++.+++|+.++...+ .+.+.+|+ +.||+||+|||+ .|. .+..+|... ..+++ .+.+..
T Consensus 77 ~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~-~~~~~g~~~~~g~~~~~--~~~~~~-- 150 (332)
T 3lzw_A 77 MAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR-KLELENAEQYEGKNLHY--FVDDLQ-- 150 (332)
T ss_dssp HTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC-CCCCTTGGGGBTTTEES--SCSCGG--
T ss_pred HHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC-CCCCCChhhccCceEEE--ecCCHH--
Confidence 5567999999999999998765 78888886 999999999999 665 344444322 23332 121111
Q ss_pred HHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCC
Q 011267 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGS 280 (489)
Q Consensus 201 ~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~ 280 (489)
...+++++|||+|.+|+|+|..|.+.+.+|+++++.+++.+. ++ ..+.+++.||++++ ++.++++..++
T Consensus 151 ---~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~--~~-----~~~~l~~~gv~~~~-~~~v~~i~~~~ 219 (332)
T 3lzw_A 151 ---KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH--EH-----SVENLHASKVNVLT-PFVPAELIGED 219 (332)
T ss_dssp ---GGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC--HH-----HHHHHHHSSCEEET-TEEEEEEECSS
T ss_pred ---HcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc--HH-----HHHHHhcCCeEEEe-CceeeEEecCC
Confidence 125789999999999999999999999999999999877542 22 23447889999999 99999998543
Q ss_pred CCcEEEEEeCC-----CcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcc
Q 011267 281 DGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 355 (489)
Q Consensus 281 ~~~v~~v~~~~-----g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~ 355 (489)
+ +..|.+.+ ++++++|.||+|+|++|++++++.++++.++|+|.||+++||+.|+|||+|||+..+..
T Consensus 220 ~--~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~----- 292 (332)
T 3lzw_A 220 K--IEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGK----- 292 (332)
T ss_dssp S--CCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBCSSTTEEECGGGEECTTC-----
T ss_pred c--eEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCceecCCEEEccceecCCCC-----
Confidence 2 34566655 45799999999999999999999999988878899999999999999999999975432
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 011267 356 ARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 356 ~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
...+..|..+|+.+|.+|+.
T Consensus 293 --~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 293 --VNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp --CCCHHHHHHHHHHHHHHHHH
T ss_pred --cceEeeehhhHHHHHHHHHH
Confidence 33667788999999998875
No 58
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=7e-36 Score=292.39 Aligned_cols=290 Identities=21% Similarity=0.252 Sum_probs=213.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+++||+|||||+||++||.+|++.|+ +|+|||++ .... .... .....++++.............++
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~--~gg~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 79 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYML---KTLVIGET--PGGQ-LTEA--------GIVDDYLGLIEIQASDMIKVFNKH 79 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESS--TTGG-GGGC--------CEECCSTTSTTEEHHHHHHHHHHH
T ss_pred CccCEEEECccHHHHHHHHHHHHCCC---cEEEEecc--CCCe-eccc--------ccccccCCCCCCCHHHHHHHHHHH
Confidence 45899999999999999999999986 69999997 1110 0000 000111111110000001122345
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--CEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCC---CceEeecCHHHHHHHHHhh
Q 011267 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~--~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~---~gv~~~~~~~~~~~~~~~~ 204 (489)
+++.+++++. .+|..++.+. ..+.+.+|.++.||+||+|||+.|. .|..++... +++++. .......
T Consensus 80 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~-~~~i~g~~~~~~~~~~~~------~~~~~~~ 151 (323)
T 3f8d_A 80 IEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR-KLGVPGEQEFAGRGISYC------SVADAPL 151 (323)
T ss_dssp HHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC-CCCCTTTTTTBTTTEESC------HHHHGGG
T ss_pred HHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc-cCCCCchhhhcCCceEEe------ccCCHhH
Confidence 5677999998 8999998764 4678888889999999999999976 455555433 444332 1112234
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcE
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRV 284 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v 284 (489)
..+++++|||+|.+|+|+|..|.+.+.+|+++++.+++++ ++. .+.+.+++.||++++ ++.++++..+ +++
T Consensus 152 ~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~-~~~v~~i~~~--~~~ 222 (323)
T 3f8d_A 152 FKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPI---YVETVKKKPNVEFVL-NSVVKEIKGD--KVV 222 (323)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEEC-SEEEEEEEES--SSE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHH---HHHHHHhCCCcEEEe-CCEEEEEecc--Cce
Confidence 5689999999999999999999999999999999988765 332 333444456999999 9999999854 555
Q ss_pred EEEEeCC---Cc--EEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCccccc
Q 011267 285 AAVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 358 (489)
Q Consensus 285 ~~v~~~~---g~--~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~ 358 (489)
..|++.+ |+ ++++|.||+++|.+|++++++.++++.+ +|++.||++++|+.|+|||+|||+..+. ..
T Consensus 223 ~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~-------~~ 295 (323)
T 3f8d_A 223 KQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWL-------GF 295 (323)
T ss_dssp EEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTT-------TC
T ss_pred eEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCC-------cc
Confidence 5677765 76 7999999999999999999999999875 5789999999999999999999998641 02
Q ss_pred ccHHHHHHHHHHHHHHHhc
Q 011267 359 EHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 359 ~~~~~A~~~g~~~a~~l~~ 377 (489)
..+..|..+|+.+|.++..
T Consensus 296 ~~~~~A~~~g~~aa~~i~~ 314 (323)
T 3f8d_A 296 RQVITAVAQGAVAATSAYR 314 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred cceeehhhHHHHHHHHHHH
Confidence 3667788899998888753
No 59
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=1.3e-35 Score=299.87 Aligned_cols=298 Identities=18% Similarity=0.185 Sum_probs=221.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
.++|||||||+||++||.+|++.+. +.+|+|||+++++.| .|.+.. ++.. ...... ..+..+.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~-~~~Vtlie~~~~~~~-~p~~~~-v~~g-~~~~~~------------~~~~~~~~ 65 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADP-SIEVTLIEPNETYYT-CYMSNE-VIGG-DRELAS------------LRVGYDGL 65 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSCSSEEC-STTHHH-HHHT-SSCGGG------------GEECSHHH
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCc-CCeEEEEeCCCCCCC-ccCHHH-HhcC-CCCHHH------------HhhCHHHH
Confidence 4689999999999999999999886 789999999886533 233322 2211 111111 12334567
Q ss_pred HHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCC----CCceEeecCHHHHHHHHHhhc-
Q 011267 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIRDVADADALISSLE- 205 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~----~~gv~~~~~~~~~~~~~~~~~- 205 (489)
.+.+++++.+ +|+.||++++++.+.+|.++.||+||+|||+.+. .+.++|.. ...++.+.+.+++..+++.+.
T Consensus 66 ~~~gv~~i~~-~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~-~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (401)
T 3vrd_B 66 RAHGIQVVHD-SALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLL-YDKIEGYSEALAAKLPHAWKAGEQTALLRRQLES 143 (401)
T ss_dssp HHTTCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCEEEC-GGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHH
T ss_pred HHCCCEEEEe-EEEEEEccCcEEEecccceeecceeeeccCCccc-cCCccCchhhcccCccceeccHHHHHHHHHHHHh
Confidence 7889999875 8999999999999999999999999999999876 34445532 123455666677766665543
Q ss_pred --CCCcEEEECCC----------HHHHHHHHHHHhCC--CcEEEEccCCcchh-hhhCHHHHHHHHHHHHhcCcEEEEcC
Q 011267 206 --KAKKVVVVGGG----------YIGMEVAAAAVGWK--LDTTIIFPENHLLQ-RLFTPSLAQRYEQLYQQNGVKFVKVG 270 (489)
Q Consensus 206 --~~~~vvViG~G----------~~g~e~A~~l~~~g--~~V~lv~~~~~~l~-~~~~~~~~~~l~~~l~~~Gv~~~~~~ 270 (489)
.+..+++.+++ -.+++++..+++.+ .+|++++..+.+.. ..+++.+.+.+.+.+++.||++++ +
T Consensus 144 ~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~-~ 222 (401)
T 3vrd_B 144 MDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHP-G 222 (401)
T ss_dssp SCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEEC-T
T ss_pred cccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEe-C
Confidence 33444444322 14566777776665 57899998887632 246777888888888999999999 9
Q ss_pred ceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCC-CC-CCCCCeEEeccccccC
Q 011267 271 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FR-TRMPGIFAIGDVAAFP 348 (489)
Q Consensus 271 ~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~-~~-t~~~~Iya~GD~a~~~ 348 (489)
++++.++.+.+.. .+.+++|+++++|.+++++|.+|+ .+++++++..++|+|.||++ +| |++|||||+|||+...
T Consensus 223 ~~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~~~~-~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~ 299 (401)
T 3vrd_B 223 PDAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQRAG-KIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAA 299 (401)
T ss_dssp TTTCEEEEETTTT--EEEETTSCEEECSEEEECCCEEEC-HHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCT
T ss_pred ceEEEEEecccce--EEEcCCCcEEEeeEEEEecCcCCc-hhHhhccccccCCCEEECCCcceecCCCCEEEecccccCC
Confidence 9999887554443 578999999999999999999998 78999999777788999986 65 7999999999998642
Q ss_pred CccCCcccccccHHHHHHHHHHHHHHHhc
Q 011267 349 LKMYDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 349 ~~~~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.. ..+...|..||+.+|+||++
T Consensus 300 ~~-------pk~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 300 PM-------PKSAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp TS-------CBSHHHHHHHHHHHHHHHHH
T ss_pred CC-------CchHHHHHHHHHHHHHHHHH
Confidence 21 12556689999999999864
No 60
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=4.4e-36 Score=292.99 Aligned_cols=298 Identities=20% Similarity=0.227 Sum_probs=201.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccc-cCCCCCCCChh
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTPE 128 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 128 (489)
+.+||+||||||||++||.+|++.|+ +|+|||++...... + .+.+.. .....++++++.. .+.+...+..+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~---~v~liE~~~~gg~~-~---~G~~~~-~~~i~~~~g~~~~i~~~~l~~~~~~ 74 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSL---KPVMYEGFMAGGVA-A---GGQLTT-TTIIENFPGFPNGIDGNELMMNMRT 74 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSGGGCC-T---TCGGGG-SSEECCSTTCTTCEEHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCcc-c---CCCcCC-hHHhhhccCCcccCCHHHHHHHHHH
Confidence 46899999999999999999999987 69999987532110 0 011100 0111122222210 00111122234
Q ss_pred HHHHCCcEEEeCCcEEEEeCCC--CEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcC
Q 011267 129 WYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 206 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~~--~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 206 (489)
.+++.++++... .+....... +.+.+.++.++.||+||||||+.|+. |.+||.+.............+. ......
T Consensus 75 ~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~-~~ipG~~~~~~~~~~~~~~~~~-~~~~~~ 151 (314)
T 4a5l_A 75 QSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKR-MHVPGEDKYWQNGVSACAICDG-AVPIFR 151 (314)
T ss_dssp HHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECC-CCCTTHHHHBTTTEESCHHHHT-TSGGGT
T ss_pred HHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccccc-cCCCccccccccceeeehhhhh-hhhhcC
Confidence 556778888764 666665543 46778888999999999999999874 5555533222112222222222 122346
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~ 286 (489)
+++++|||+|++|+|+|..|.++|.+|+++++.+.... .+. ...+.....+++.+. ...+.++...+ .....
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~---~~~~~~~~~~~~~~~-~~~~~~i~~~~-~~~~~ 223 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKT---MQERVLNHPKIEVIW-NSELVELEGDG-DLLNG 223 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEEC-SEEEEEEEESS-SSEEE
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cch---hhhhhhcccceeeEe-eeeeEEEEeee-eccce
Confidence 79999999999999999999999999999998876543 222 233456677888888 88888887543 33333
Q ss_pred EEe-----CCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccH
Q 011267 287 VKL-----EDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHV 361 (489)
Q Consensus 287 v~~-----~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~ 361 (489)
+.+ .+++++++|.|++++|++||++++... +..+++|++||+++|||+|+|||+|||+..+.. ..
T Consensus 224 ~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~-~~~~~~G~iv~~~~~Ts~pgIyA~GDv~~~~~~---------~~ 293 (314)
T 4a5l_A 224 AKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQ-VKTADDGYILTEGPKTSVDGVFACGDVCDRVYR---------QA 293 (314)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEEESCGGGTTS-SCBCTTSCBCCBTTBCSSTTEEECSTTTCSSCC---------CH
T ss_pred eEEeecccccceeeccccceEecccccChhHhccc-ceEcCCeeEeCCCCccCCCCEEEEEeccCCcch---------HH
Confidence 433 345689999999999999999998654 555556777999999999999999999986542 23
Q ss_pred HHHHHHHHHHHHHHh
Q 011267 362 DHARQSAQHCIKALL 376 (489)
Q Consensus 362 ~~A~~~g~~~a~~l~ 376 (489)
..|..+|+.||.++.
T Consensus 294 ~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 294 IVAAGSGCMAALSCE 308 (314)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 447778888887663
No 61
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=6.5e-36 Score=304.41 Aligned_cols=301 Identities=19% Similarity=0.198 Sum_probs=215.5
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHHH
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (489)
++|||||||+||++||.+|++.+. +.+|||||+++++.|. |.+.. +... .....++ .....++++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~-~~~VtlI~~~~~~~~~-p~l~~-v~~g-~~~~~~i-----------~~~~~~~~~ 67 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-PAFPH-LAMG-WRKFEDI-----------SVPLAPLLP 67 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-GGHHH-HHHT-CSCGGGS-----------EEESTTTGG
T ss_pred CcEEEECCCHHHHHHHHHHhccCc-CCeEEEEcCCCCCccC-ccHHH-HhcC-CCCHHHh-----------hhcHHHHHH
Confidence 589999999999999999999875 7899999999988774 55432 1111 1111111 122345667
Q ss_pred HCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhh---cCCC
Q 011267 132 EKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL---EKAK 208 (489)
Q Consensus 132 ~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~---~~~~ 208 (489)
+.+++++.+ +|+.||+++++|++++|++++||+||||||+++. ++ .+|.. ++.+.+++.+++.++++.+ ...+
T Consensus 68 ~~gv~~i~~-~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~-i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~~ 143 (430)
T 3hyw_A 68 KFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FG-AEGQE-ENSTSICTAEHALETQKKLQELYANP 143 (430)
T ss_dssp GGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CC-SBTHH-HHSCCCSSHHHHHHHHHHHHHHHHSC
T ss_pred HCCcEEEEe-EEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-CC-ccCcc-cCcCCcccHHHHHHHHHHHHhhccCC
Confidence 889999975 8999999999999999999999999999999753 33 34432 3345677888887766554 2355
Q ss_pred cEEEECCCH------HHHHH----HHHHHhCC----CcEEEEccCCcchh--hhhCHHHHHHHHHHHHhcCcEEEEcCce
Q 011267 209 KVVVVGGGY------IGMEV----AAAAVGWK----LDTTIIFPENHLLQ--RLFTPSLAQRYEQLYQQNGVKFVKVGAS 272 (489)
Q Consensus 209 ~vvViG~G~------~g~e~----A~~l~~~g----~~V~lv~~~~~~l~--~~~~~~~~~~l~~~l~~~Gv~~~~~~~~ 272 (489)
.++|+|++. .+.|+ +..+.+.+ .++++++..+.+.. ....+...+.+.+.++++||++++ ++.
T Consensus 144 ~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~-~~~ 222 (430)
T 3hyw_A 144 GPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIA-NVA 222 (430)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEEC-SCE
T ss_pred ceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEe-Cce
Confidence 566666542 23343 44455555 36888887765532 224567778899999999999999 999
Q ss_pred EEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEccCCCCCCchhhhcCCe--ecC-CcEEeCCCCC-CCCCCeEEeccccc
Q 011267 273 IKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERVGLN--SSV-GGIQVDGQFR-TRMPGIFAIGDVAA 346 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~~~g--~~i~aD~vi~a~G~~p~~~~~~~~gl~--~~~-g~i~vd~~~~-t~~~~Iya~GD~a~ 346 (489)
|++++. +.+ .+...+| +++++|.+++++|.+|+ +++..++.. .+. +.+.||++|| |++|||||+|||+.
T Consensus 223 v~~v~~---~~~-~~~~~~g~~~~i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~ 297 (430)
T 3hyw_A 223 VKAIEP---DKV-IYEDLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTA 297 (430)
T ss_dssp EEEECS---SEE-EEECTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBC
T ss_pred EEEEeC---Cce-EEEeeCCCceEeecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEe
Confidence 999963 222 2333333 57999999999999998 677766543 343 4589999999 79999999999998
Q ss_pred cCCccCCcc--cccccHHHHHHHHHHHHHHHhc
Q 011267 347 FPLKMYDRT--ARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 347 ~~~~~~~~~--~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.+....... ..+.+.+.|.+||+.+|+||++
T Consensus 298 ~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 298 IPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp CCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 765321110 1133566799999999999975
No 62
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.8e-35 Score=288.14 Aligned_cols=288 Identities=24% Similarity=0.286 Sum_probs=208.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+.+||+|||||+||++||..|++.|+ +|+|||+... . ....... ....++++.............++
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~-g-g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGF---SVAILDKAVA-G-GLTAEAP--------LVENYLGFKSIVGSELAKLFADH 81 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSST-T-GGGGGCS--------CBCCBTTBSSBCHHHHHHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCC-C-ccccccc--------hhhhcCCCcccCHHHHHHHHHHH
Confidence 45899999999999999999999986 6999998532 1 1000000 00011111000000001122344
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCC---CceEeecCHHHHHHHHHhh
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~---~gv~~~~~~~~~~~~~~~~ 204 (489)
+++.+++++. .+|..++.+.+ .|.+ ++.++.||+||+|||+.|. .|..++... .++++..+ .....
T Consensus 82 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~-~~~i~g~~~~~~~~~~~~~~------~~~~~ 152 (319)
T 3cty_A 82 AANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK-HLGVKGESEYFGKGTSYCST------CDGYL 152 (319)
T ss_dssp HHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESCHH------HHGGG
T ss_pred HHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc-cCCCCChHHhCCceEEEEEe------cchhh
Confidence 5667999988 68999987655 5655 5667999999999999876 344455321 34443321 12234
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcE
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRV 284 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v 284 (489)
..+++++|||+|.+|+|+|..|.+++.+|+++++.+.+.. ++. +.+.+++.||++++ +++++++..+ ++++
T Consensus 153 ~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~~----l~~~l~~~gv~i~~-~~~v~~i~~~-~~~v 223 (319)
T 3cty_A 153 FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---ENA----YVQEIKKRNIPYIM-NAQVTEIVGD-GKKV 223 (319)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CHH----HHHHHHHTTCCEEC-SEEEEEEEES-SSSE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CHH----HHHHHhcCCcEEEc-CCeEEEEecC-CceE
Confidence 5679999999999999999999999999999999887643 333 44556688999999 9999999854 3445
Q ss_pred EEEEeC---CCc--EEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCccccc
Q 011267 285 AAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 358 (489)
Q Consensus 285 ~~v~~~---~g~--~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~ 358 (489)
..+.+. +|+ ++++|.||+|+|++|++++++++|++.+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 224 ~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--------- 294 (319)
T 3cty_A 224 TGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNF--------- 294 (319)
T ss_dssp EEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---------
T ss_pred EEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcch---------
Confidence 566664 665 6999999999999999999999998875 5789999999999999999999998532
Q ss_pred ccHHHHHHHHHHHHHHHhc
Q 011267 359 EHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 359 ~~~~~A~~~g~~~a~~l~~ 377 (489)
..+..|..+|+.+|.++..
T Consensus 295 ~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 295 AQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 2566789999999998864
No 63
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=2.7e-35 Score=287.00 Aligned_cols=286 Identities=22% Similarity=0.300 Sum_probs=207.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-CCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
++||+|||||+||+++|..|++.|. +|+|||+.....+ ..+.+. .++...............++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~---~v~li~~~~gG~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 65 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGI---RTGLMGERFGGQILDTVDIE------------NYISVPKTEGQKLAGALKVH 65 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSTTGGGGGCCEEC------------CBTTBSSEEHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCceeccccccc------------cccCcCCCCHHHHHHHHHHH
Confidence 3699999999999999999999876 6999976421000 000000 00000000000001122345
Q ss_pred HHHCCcEEEeCCcEEEEeCC-----CCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCC---CCceEeecCHHHHHHHH
Q 011267 130 YKEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALI 201 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~-----~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~---~~gv~~~~~~~~~~~~~ 201 (489)
+++.+++++.+++|..++++ ...+.+.+|.++.||+||+|||+.|.. |..+|.. ...++++ ..+.
T Consensus 66 ~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~-~~~~g~~~~~~~~~~~~------~~~~ 138 (310)
T 1fl2_A 66 VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN-MNVPGEDQYRTKGVTYC------PHCD 138 (310)
T ss_dssp HHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC-CCCTTTTTTBTTTEESC------HHHH
T ss_pred HHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC-CCCCChhhcccceeEEe------ccCc
Confidence 56789999998899999875 357888888889999999999998763 4445532 1233332 2223
Q ss_pred HhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHh-cCcEEEEcCceEEEEEeCC
Q 011267 202 SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKVGASIKNLEAGS 280 (489)
Q Consensus 202 ~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~-~Gv~~~~~~~~v~~i~~~~ 280 (489)
.....+++++|||+|.+|+|+|..|.+.+.+|+++++.+++. +++ .+.+.+++ .||++++ +++++++..+
T Consensus 139 ~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~----~~~~~l~~~~gv~v~~-~~~v~~i~~~- 209 (310)
T 1fl2_A 139 GPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQ----VLQDKLRSLKNVDIIL-NAQTTEVKGD- 209 (310)
T ss_dssp GGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCH----HHHHHHHTCTTEEEES-SEEEEEEEES-
T ss_pred HhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccH----HHHHHHhhCCCeEEec-CCceEEEEcC-
Confidence 344578999999999999999999999999999999998763 343 34455666 6999999 9999999853
Q ss_pred CCcEEEEEeCC---Cc--EEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCc
Q 011267 281 DGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354 (489)
Q Consensus 281 ~~~v~~v~~~~---g~--~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~ 354 (489)
++++..+++.+ |+ ++++|.||+|+|++|+++++++. ++.+ +|+|.||+++||+.|+|||+|||+..+..
T Consensus 210 ~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~---- 284 (310)
T 1fl2_A 210 GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYK---- 284 (310)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSSC----
T ss_pred CCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCccCCCCEEEeecccCCcch----
Confidence 45665666653 53 68999999999999999888764 6654 57899999999999999999999986532
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 011267 355 TARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 355 ~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.+..|..+|+.+|.+|..
T Consensus 285 -----~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 285 -----QIIIATGEGAKASLSAFD 302 (310)
T ss_dssp -----CHHHHHHHHHHHHHHHHH
T ss_pred -----hhhhhHhhHHHHHHHHHH
Confidence 455688888888888763
No 64
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=7.7e-35 Score=285.76 Aligned_cols=288 Identities=20% Similarity=0.268 Sum_probs=207.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCcc-ccCCCCCCCChh
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPE 128 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 128 (489)
+++||+|||||+||+++|..|++.|+ +|+|||++. .... ..... .+ ..+++++. ...........+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~-~gg~-~~~~~-~~-------~~~~~~~~~~~~~~~~~~l~~ 73 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQL---STLILEKGM-PGGQ-IAWSE-EV-------ENFPGFPEPIAGMELAQRMHQ 73 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTGG-GGGCS-CB-------CCSTTCSSCBCHHHHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCC---cEEEEeCCC-CCcc-ccccc-cc-------ccCCCCCCCCCHHHHHHHHHH
Confidence 46899999999999999999999986 799999982 2111 00000 00 01111100 000000112234
Q ss_pred HHHHCCcEEEeCCcEEEEeCC--C---CEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCC---CceEeecCHHHHHHH
Q 011267 129 WYKEKGIEMIYQDPVTSIDIE--K---QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 200 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~--~---~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~---~gv~~~~~~~~~~~~ 200 (489)
.+++.+++++. .+|..++.+ . ..+.+.+|.++.||+||+|||+.|. .|..++... .+++++.. .
T Consensus 74 ~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~-~~~i~g~~~~~~~~~~~~~~------~ 145 (325)
T 2q7v_A 74 QAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR-KLGIPGEDNFWGKGVSTCAT------C 145 (325)
T ss_dssp HHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC-CCCCTTTTTTBTTTEESCHH------H
T ss_pred HHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC-CCCCCChhhccCceEEEecc------C
Confidence 56678999988 589999876 3 4677788889999999999999876 444555321 33443321 1
Q ss_pred HHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCC
Q 011267 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGS 280 (489)
Q Consensus 201 ~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~ 280 (489)
......+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++.+ ..+.+++.||++++ +++++++..
T Consensus 146 ~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~---~~~l~~~~gv~i~~-~~~v~~i~~-- 216 (325)
T 2q7v_A 146 DGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVA---QARAFANPKMKFIW-DTAVEEIQG-- 216 (325)
T ss_dssp HGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEEC-SEEEEEEEE--
T ss_pred CHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHH---HHHHHhcCCceEec-CCceEEEcc--
Confidence 22345679999999999999999999999999999999887643 3332 22333456999999 999999985
Q ss_pred CCcEEEEEeC---CCc--EEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCc
Q 011267 281 DGRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354 (489)
Q Consensus 281 ~~~v~~v~~~---~g~--~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~ 354 (489)
++++..|.+. +|+ ++++|.||+|+|++|++++++.+ ++.+ +|+|.||++++|+.|+|||+|||+..+.
T Consensus 217 ~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~----- 290 (325)
T 2q7v_A 217 ADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY----- 290 (325)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC-----
T ss_pred CCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCccCCCCEEEeecccCccH-----
Confidence 3555567765 665 79999999999999999998887 6665 5789999999999999999999997532
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 011267 355 TARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 355 ~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
..+..|..+|+.+|.+|..
T Consensus 291 ----~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 291 ----RQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp ----CCHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHH
Confidence 2566788999999998864
No 65
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=1.1e-35 Score=288.94 Aligned_cols=285 Identities=14% Similarity=0.125 Sum_probs=195.9
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
.|+++||+||||||||++||.+|++.|+ +|+|||++.....- .....++.... .+. +.+......
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~---~v~lie~~~~gg~~-~~~~~~~~~~~-----~~~------~~~~~~~~~ 67 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARK---QIALFDNNTNRNRV-TQNSHGFITRD-----GIK------PEEFKEIGL 67 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCGGGG-SSCBCCSTTCT-----TBC------HHHHHHHHH
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCCee-eeecCCccCCC-----CCC------HHHHHHHHH
Confidence 5778999999999999999999999987 69999987431100 00000111000 000 000000011
Q ss_pred hHHHHC-CcEEEeCCcEEEEeCC---CCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCC---CCceEeecCHHHHHHH
Q 011267 128 EWYKEK-GIEMIYQDPVTSIDIE---KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADAL 200 (489)
Q Consensus 128 ~~~~~~-~i~~~~~~~V~~id~~---~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~---~~gv~~~~~~~~~~~~ 200 (489)
+...++ ++.+.. ..+..++.. .+++.+.+|+++.||+||||||++|+ .|.++|.+ ..++++ ....
T Consensus 68 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~-~p~i~G~~~~~~~~v~~------~~~~ 139 (304)
T 4fk1_A 68 NEVMKYPSVHYYE-KTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE-FPSIPNVREYYGKSLFS------CPYC 139 (304)
T ss_dssp HHHTTSTTEEEEE-CCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE-CCSCTTHHHHBTTTEES------CHHH
T ss_pred HHHHhcCCEEEEe-eEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc-cccccCccccccceeee------cccc
Confidence 122233 345554 466665432 35788999999999999999999987 45545421 122322 2222
Q ss_pred HHhhcCCCcEEEECCCH-HHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeC
Q 011267 201 ISSLEKAKKVVVVGGGY-IGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAG 279 (489)
Q Consensus 201 ~~~~~~~~~vvViG~G~-~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~ 279 (489)
......+++++|||||. .++|+|..+.+.+.+|+++.+.+.+.. .+.+.+++.|++++. + .++.+. .
T Consensus 140 ~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~~---------~~~~~l~~~g~~~~~-~-~v~~~~-~ 207 (304)
T 4fk1_A 140 DGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELSQ---------TIMDELSNKNIPVIT-E-SIRTLQ-G 207 (304)
T ss_dssp HSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCCH---------HHHHHHHTTTCCEEC-S-CEEEEE-S
T ss_pred chhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccchh---------hhhhhhhccceeEee-e-eEEEee-c
Confidence 33334567888888875 568999999999999999988765433 345668889999987 5 577776 3
Q ss_pred CCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccCCccccc
Q 011267 280 SDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARV 358 (489)
Q Consensus 280 ~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~ 358 (489)
+++++..|++++|+++++|.+++++|.+|++.+++++|++.+ +|+|.||+++|||+|+|||+|||+..+..
T Consensus 208 ~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~~-------- 279 (304)
T 4fk1_A 208 EGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPS-------- 279 (304)
T ss_dssp GGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSCC--------
T ss_pred CCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcch--------
Confidence 456677899999999999999999888888889999999986 46699999999999999999999974322
Q ss_pred ccHHHHHHHHHHHHHHHh
Q 011267 359 EHVDHARQSAQHCIKALL 376 (489)
Q Consensus 359 ~~~~~A~~~g~~~a~~l~ 376 (489)
.+..|..+|+.||.++.
T Consensus 280 -~~~~A~~~G~~AA~~i~ 296 (304)
T 4fk1_A 280 -SLIIAASQGNKAAIAIN 296 (304)
T ss_dssp -CHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 34557788888877664
No 66
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.1e-35 Score=284.35 Aligned_cols=278 Identities=21% Similarity=0.176 Sum_probs=204.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
++||+|||||+||+++|.+|++.|+ +|+|||+++..... +.....+........ ........+.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 66 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARK---NILLVDAGERRNRF-ASHSHGFLGQDGKAP-----------GEIIAEARRQI 66 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECCCCGGGG-CSCCCSSTTCTTCCH-----------HHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCccccc-chhhcCCcCCCCCCH-----------HHHHHHHHHHH
Confidence 4799999999999999999999986 79999987532110 111111110000000 00001122334
Q ss_pred HHC-CcEEEeCCcEEEEeCCC--CEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCC---CceEeecCHHHHHHHHHhh
Q 011267 131 KEK-GIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (489)
Q Consensus 131 ~~~-~i~~~~~~~V~~id~~~--~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~---~gv~~~~~~~~~~~~~~~~ 204 (489)
.+. +++++. .+|+.++++. ..+.+.+|.++.||+||+|||+.|. .|..+|... .++++.. ......
T Consensus 67 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~-~~~~~g~~~~~~~~~~~~~------~~~~~~ 138 (297)
T 3fbs_A 67 ERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE-LPEIAGLRERWGSAVFHCP------YCHGYE 138 (297)
T ss_dssp TTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE-CCCCBTTGGGBTTTEESCH------HHHTGG
T ss_pred HhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC-CCCCCCchhhcCCeeEEcc------cCcchh
Confidence 444 788876 4999998764 4788889989999999999999876 455555332 2333321 111223
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcE
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRV 284 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v 284 (489)
..+++++|||+|.+|+|+|..|.+.| +|+++.+.+.. +. +.+.+.+++.||+++. +.|+++..+ +
T Consensus 139 ~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~----~~~~~~l~~~gv~i~~--~~v~~i~~~--~-- 203 (297)
T 3fbs_A 139 LDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PD----ADQHALLAARGVRVET--TRIREIAGH--A-- 203 (297)
T ss_dssp GTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CC----HHHHHHHHHTTCEEEC--SCEEEEETT--E--
T ss_pred hcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CC----HHHHHHHHHCCcEEEc--ceeeeeecC--C--
Confidence 46899999999999999999999999 99999987652 22 3456778899999985 899999732 2
Q ss_pred EEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeecC---C-cEEeCCCCCCCCCCeEEeccccccCCccCCccccccc
Q 011267 285 AAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSV---G-GIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEH 360 (489)
Q Consensus 285 ~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~---g-~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~ 360 (489)
.|.+.+|+++++|.||+++|.+|++++++.++++.+. | ++.||++++|+.|+|||+|||+..+. .
T Consensus 204 -~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~~----------~ 272 (297)
T 3fbs_A 204 -DVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPAG----------S 272 (297)
T ss_dssp -EEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTTC----------C
T ss_pred -eEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCchH----------H
Confidence 5888999999999999999999999999999988753 4 69999999999999999999998532 4
Q ss_pred HHHHHHHHHHHHHHHhc
Q 011267 361 VDHARQSAQHCIKALLS 377 (489)
Q Consensus 361 ~~~A~~~g~~~a~~l~~ 377 (489)
+..|..+|+.+|.++..
T Consensus 273 ~~~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 273 VALAVGDGAMAGAAAHR 289 (297)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHH
Confidence 56688889888888753
No 67
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=6.8e-35 Score=284.26 Aligned_cols=289 Identities=18% Similarity=0.228 Sum_probs=208.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccc-cCCCCCCCChhH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTPEW 129 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 129 (489)
++||+|||||+||++||..|++.|+ + +|+|||++..... ..... .+ ..+++++.. ..........++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~-~-~v~lie~~~~gg~--~~~~~-~~-------~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGV-K-NAVLFEKGMPGGQ--ITGSS-EI-------ENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-S-SEEEECSSSTTCG--GGGCS-CB-------CCSTTCCSCBCHHHHHHHHHHH
T ss_pred CceEEEECccHHHHHHHHHHHHCCC-C-cEEEEcCCCCCcc--ccccc-cc-------ccCCCCcccCCHHHHHHHHHHH
Confidence 3699999999999999999999876 2 6999998632110 00000 00 001111000 000001112344
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCC---CCceEeecCHHHHHHHHHhh
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALISSL 204 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~---~~gv~~~~~~~~~~~~~~~~ 204 (489)
+.+.+++++. .+|..++.+.+ .+.+.+|.++.||+||+|||+.|. .|..+|.. .++++++.+ .....
T Consensus 69 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~-~~~~~g~~~~~~~~~~~~~~------~~~~~ 140 (311)
T 2q0l_A 69 CFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK-RTGIKGESEYWGKGVSTCAT------CDGFF 140 (311)
T ss_dssp HHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTHHHHBTTTEESCHH------HHGGG
T ss_pred HHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC-CCCCCChhhccCCcEEEeec------CChhh
Confidence 5667999988 68999987666 677788888999999999999876 45444421 133444321 12234
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHH-hcCcEEEEcCceEEEEEeCCCCc
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ-QNGVKFVKVGASIKNLEAGSDGR 283 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~-~~Gv~~~~~~~~v~~i~~~~~~~ 283 (489)
..+++++|||+|.+|+|+|..|.+.|.+|+++++.+++. .++. +.+.+. +.||++++ ++.++++..+ +++
T Consensus 141 ~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~v~~-~~~v~~i~~~-~~~ 211 (311)
T 2q0l_A 141 YKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPI----TLEHAKNNDKIEFLT-PYVVEEIKGD-ASG 211 (311)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEET-TEEEEEEEEE-TTE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHH----HHHHHhhCCCeEEEe-CCEEEEEECC-CCc
Confidence 567999999999999999999999999999999988763 2443 333444 57999999 9999999854 345
Q ss_pred EEEEEeC---CCc--EEEcCEEEEccCCCCCCchhhhcC----Ceec-CCcEEeCCCCCCCCCCeEEeccccccCCccCC
Q 011267 284 VAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVG----LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYD 353 (489)
Q Consensus 284 v~~v~~~---~g~--~i~aD~vi~a~G~~p~~~~~~~~g----l~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~ 353 (489)
+..+++. +|+ ++++|.||+|+|++|++++++.++ ++.+ +|+|.||+++||+.|+|||+|||+..+.
T Consensus 212 v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~---- 287 (311)
T 2q0l_A 212 VSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP---- 287 (311)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC----
T ss_pred EeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch----
Confidence 5456665 675 799999999999999999998875 7765 5789999999999999999999998532
Q ss_pred cccccccHHHHHHHHHHHHHHHhc
Q 011267 354 RTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 354 ~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
..+..|..+|+.+|.||..
T Consensus 288 -----~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 288 -----KQVVCAASDGATAALSVIS 306 (311)
T ss_dssp -----CCHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHhHHHHHHHHHH
Confidence 2567799999999998863
No 68
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=4.8e-35 Score=286.44 Aligned_cols=293 Identities=18% Similarity=0.250 Sum_probs=212.1
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccc-cCCCCCCCCh
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTP 127 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 127 (489)
++++||+|||||+||+++|.+|++.|+ +|+|+|+... ... +.... ....+++++.. ..........
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~-gg~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 69 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANL---QPVLITGMEK-GGQ-------LTTTT--EVENWPGDPNDLTGPLLMERMH 69 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTC---CCEEECCSST-TGG-------GGGCS--BCCCSTTCCSSCBHHHHHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEccCCC-Cce-------Eecch--hhhhCCCCCCCCCHHHHHHHHH
Confidence 346899999999999999999999876 6999996421 100 00000 00011111100 0000011223
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCCEEE-eCCCeEEeeCcEEecCCCCCCCCCCCCCCC---CCceEeecCHHHHHHHHHh
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEKQTLI-TNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALISS 203 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~~~v~-~~~g~~i~yd~lvlATG~~~~~~p~~~g~~---~~gv~~~~~~~~~~~~~~~ 203 (489)
.++.+.+++++.+ +|..++.+...+. +.++.++.||+||+|||+.|. .|..++.. ..++++.. .....
T Consensus 70 ~~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~-~~~~~g~~~~~~~~~~~~~------~~~~~ 141 (320)
T 1trb_A 70 EHATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASAR-YLGLPSEEAFKGRGVSACA------TSDGF 141 (320)
T ss_dssp HHHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEEC-CCCCHHHHHTBTTTEESCH------HHHGG
T ss_pred HHHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcC-CCCCCChHHhCCceeEecc------cCCcc
Confidence 4556789999987 5999998765444 567788999999999999876 34444321 12333321 12223
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCc
Q 011267 204 LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGR 283 (489)
Q Consensus 204 ~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~ 283 (489)
+..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++.+.+.+.+.+++.||++++ +++|+++..+ +++
T Consensus 142 ~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~~l~~~l~~~gv~i~~-~~~v~~i~~~-~~~ 216 (320)
T 1trb_A 142 FYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA---EKILIKRLMDKVENGNIILHT-NRTLEEVTGD-QMG 216 (320)
T ss_dssp GGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC---CHHHHHHHHHHHHTSSEEEEC-SCEEEEEEEC-SSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc---CHHHHHHHHHhcccCCeEEEc-CceeEEEEcC-CCc
Confidence 45789999999999999999999999999999999887643 677888888889999999999 9999999854 346
Q ss_pred EEEEEeCC----C--cEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCC-----CCCCCCeEEeccccccCCccC
Q 011267 284 VAAVKLED----G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQF-----RTRMPGIFAIGDVAAFPLKMY 352 (489)
Q Consensus 284 v~~v~~~~----g--~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~-----~t~~~~Iya~GD~a~~~~~~~ 352 (489)
+..|++.+ | ++++||.||+|+|++|++++++ .+++.++|++.||+++ +|+.|+|||+|||+..+..
T Consensus 217 v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~-- 293 (320)
T 1trb_A 217 VTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYR-- 293 (320)
T ss_dssp EEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSC--
T ss_pred eEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc-ccccccCceEEECCCcccccccCCCCCEEEcccccCCcch--
Confidence 66677754 4 5799999999999999998887 4566666779999997 7999999999999986422
Q ss_pred CcccccccHHHHHHHHHHHHHHHhc
Q 011267 353 DRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 353 ~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.+..|..+|+.+|.+|..
T Consensus 294 -------~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 294 -------QAITSAGTGCMAALDAER 311 (320)
T ss_dssp -------CHHHHHHHHHHHHHHHHH
T ss_pred -------hhhhhhccHHHHHHHHHH
Confidence 455688888888888753
No 69
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=2.8e-35 Score=290.09 Aligned_cols=295 Identities=19% Similarity=0.252 Sum_probs=208.6
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccc-cCCCCCCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQT 126 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 126 (489)
..+++||+|||||+||+++|..|++.|+ +|+|||+++.... ... +.+.. ......+++++.. .........
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~vie~~~~~~~---~~g-g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEI---KPILYEGMMANGI---AAG-GQLTT-TTEIENFPGFPDGLTGSELMDRM 90 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSBTTB---CTT-CGGGG-SSEECCSTTCTTCEEHHHHHHHH
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCCCC---CcC-ccccc-chhhcccCCCcccCCHHHHHHHH
Confidence 3457899999999999999999999987 6999999652111 110 11100 0000111111110 000111223
Q ss_pred hhHHHHCCcEEEeCCcEEEEeCCCCEEEe-----CCCeEEeeCcEEecCCCCCCCCCCCCCCC---CCceEeecCHHHHH
Q 011267 127 PEWYKEKGIEMIYQDPVTSIDIEKQTLIT-----NSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADAD 198 (489)
Q Consensus 127 ~~~~~~~~i~~~~~~~V~~id~~~~~v~~-----~~g~~i~yd~lvlATG~~~~~~p~~~g~~---~~gv~~~~~~~~~~ 198 (489)
.+++++.+++++.++ |..++.+...+.+ .++.++.||+||+|||+.+. .|..+|.. ..++++. .
T Consensus 91 ~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~-~~~~~g~~~~~~~~~~~~------~ 162 (338)
T 3itj_A 91 REQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK-RMHLPGEETYWQKGISAC------A 162 (338)
T ss_dssp HHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC-CCCCTTHHHHBTTTEESC------H
T ss_pred HHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC-CCCCCCchhccCccEEEc------h
Confidence 455667899999976 9999988765554 46778999999999999876 44444421 1223222 2
Q ss_pred HHHHh--hcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhc-CcEEEEcCceEEE
Q 011267 199 ALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN-GVKFVKVGASIKN 275 (489)
Q Consensus 199 ~~~~~--~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~-Gv~~~~~~~~v~~ 275 (489)
..... ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.++. ...+.+.+.+. ||++++ ++.|++
T Consensus 163 ~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~-~~~v~~ 234 (338)
T 3itj_A 163 VCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILY-NTVALE 234 (338)
T ss_dssp HHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEEC-SEEEEE
T ss_pred hcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEee-cceeEE
Confidence 22222 34689999999999999999999999999999999987765 23444555554 999999 999999
Q ss_pred EEeCCCCcEEEEEeCC-----CcEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEE-eCCCCCCCCCCeEEeccccccC
Q 011267 276 LEAGSDGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQ-VDGQFRTRMPGIFAIGDVAAFP 348 (489)
Q Consensus 276 i~~~~~~~v~~v~~~~-----g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~-vd~~~~t~~~~Iya~GD~a~~~ 348 (489)
+..+ ++.+..|++.+ ++++++|.||+|+|++|+.++++. +++.+ +|.+. +|++++|+.|+|||+|||+..+
T Consensus 235 i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~ 312 (338)
T 3itj_A 235 AKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSK 312 (338)
T ss_dssp EEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSS
T ss_pred EEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCC
Confidence 9854 45566677765 467999999999999999988877 88876 56677 4889999999999999999743
Q ss_pred CccCCcccccccHHHHHHHHHHHHHHHhc
Q 011267 349 LKMYDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 349 ~~~~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
. ..+..|..+|+.||.+|..
T Consensus 313 ~---------~~~~~A~~~g~~aa~~i~~ 332 (338)
T 3itj_A 313 Y---------RQAITSAGSGCMAALDAEK 332 (338)
T ss_dssp C---------CCHHHHHHHHHHHHHHHHH
T ss_pred c---------cceeeehhhhHHHHHHHHH
Confidence 2 2556788899999988864
No 70
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=1.5e-34 Score=281.95 Aligned_cols=289 Identities=21% Similarity=0.221 Sum_probs=205.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEE-EcCCCCCCCCCCCCccccCCCCCCCCCCCCCCc-cccCCCCCCCCh
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCI-VSKEAYAPYERPALTKGYLFPLDKKPARLPGFH-TCVGSGGERQTP 127 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~l-i~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 127 (489)
.++||+|||||+||++||.+|++.|+ +|+| +|++. .... +... .....++++. ............
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~li~e~~~-~gG~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGL---KNVVMFEKGM-PGGQ-------ITSS--SEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTC---SCEEEECSSS-TTGG-------GGGC--SCBCCSTTCCSCBCHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC---CeEEEEeCCC-CCce-------eeee--ceeccCCCCCCCCCHHHHHHHHH
Confidence 56899999999999999999999987 6888 99842 2110 0000 0000111111 000000011223
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCC----CEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCC---CceEeecCHHHHHHH
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADAL 200 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~----~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~---~gv~~~~~~~~~~~~ 200 (489)
+++++.+++++.+ +|..+ .+. ..+.+..+.++.||+||+|||+.|. .|..++... +++++. ...
T Consensus 70 ~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~-~~~~~g~~~~~~~~~~~~------~~~ 140 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK-KAGFKGEDEFFGKGVSTC------ATC 140 (315)
T ss_dssp HHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESC------HHH
T ss_pred HHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC-CCCCCChhhcCCCeEEee------ecc
Confidence 4556679999987 88888 433 3421333328999999999999876 455555433 344332 222
Q ss_pred HHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCC
Q 011267 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGS 280 (489)
Q Consensus 201 ~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~ 280 (489)
......+++++|||+|.+|+|+|..|.+.+.+|+++++.+++.. ++. .+.+.+++.||++++ ++.++++..+
T Consensus 141 ~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~-~~~v~~i~~~- 212 (315)
T 3r9u_A 141 DGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---APS---TVEKVKKNEKIELIT-SASVDEVYGD- 212 (315)
T ss_dssp HGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---CHH---HHHHHHHCTTEEEEC-SCEEEEEEEE-
T ss_pred cccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---CHH---HHHHHHhcCCeEEEe-CcEEEEEEcC-
Confidence 33345689999999999999999999999999999999987632 333 344556789999999 9999999854
Q ss_pred CCcEEEEEeC--CCc--EEEcCEEEEccCCCCCCchhhh---cC-Ceec-CCcEEeCCCCCCCCCCeEEeccccccCCcc
Q 011267 281 DGRVAAVKLE--DGS--TIDADTIVIGIGAKPTVSPFER---VG-LNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKM 351 (489)
Q Consensus 281 ~~~v~~v~~~--~g~--~i~aD~vi~a~G~~p~~~~~~~---~g-l~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~ 351 (489)
++++..+++. +|+ ++++|.||+|+|.+|++++++. +| ++.+ +|++.||+++||+.|+|||+|||+..+.
T Consensus 213 ~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~-- 290 (315)
T 3r9u_A 213 KMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP-- 290 (315)
T ss_dssp TTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC--
T ss_pred CCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch--
Confidence 4456566665 775 7999999999999999988776 55 7775 4789999999999999999999986422
Q ss_pred CCcccccccHHHHHHHHHHHHHHHhc
Q 011267 352 YDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 352 ~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
..+..|..+|+.+|.+|..
T Consensus 291 -------~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 291 -------KQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp -------CCHHHHHHHHHHHHHHHHH
T ss_pred -------hhhhhHHhhHHHHHHHHHH
Confidence 2566788999999988863
No 71
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=1.6e-34 Score=292.70 Aligned_cols=288 Identities=20% Similarity=0.215 Sum_probs=220.7
Q ss_pred CcEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChh
Q 011267 52 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (489)
+||||||||+||+++|.+|++ .|. +|+|||+++.+.|. |.+.. .. ........+ .....+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~---~V~vie~~~~~~~~-~~~~~-~~-~~~~~~~~~-----------~~~~~~ 64 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKA---DVKVINKSRFSYFR-PALPH-VA-IGVRDVDEL-----------KVDLSE 64 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGS---EEEEEESSSEEEEC-CSSCC-CC-SSCCCCCCE-----------EEEHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEeCCCCceec-cchhh-cc-cCCcCHHHH-----------HHHHHH
Confidence 689999999999999999999 554 89999999876443 33322 11 111111111 123456
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeE----EeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhh
Q 011267 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL----LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~----i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~ 204 (489)
++++.+++++.+ +|+.++.+.+.|.+.++.. +.||+||+|||+.|. .+.++|... ....+.+..++.++.+.+
T Consensus 65 ~~~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~-~~~ipG~~~-~~~~~~~~~~~~~~~~~l 141 (409)
T 3h8l_A 65 ALPEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA-TELVKGWDK-YGYSVCEPEFATKLREKL 141 (409)
T ss_dssp HTGGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC-GGGSBTHHH-HCEESSSTTHHHHHHHHH
T ss_pred HHhhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC-ccCCCChhh-cCcCcCCHHHHHHHHHHH
Confidence 667789999986 9999999999999887764 899999999999876 344444321 344556667777776655
Q ss_pred cCC-CcEEEECCCH-------------------------HHHHHH----HHHHhCCC----cEEEEccCCcchhhhhCHH
Q 011267 205 EKA-KKVVVVGGGY-------------------------IGMEVA----AAAVGWKL----DTTIIFPENHLLQRLFTPS 250 (489)
Q Consensus 205 ~~~-~~vvViG~G~-------------------------~g~e~A----~~l~~~g~----~V~lv~~~~~~l~~~~~~~ 250 (489)
... ++++|||+|+ .++|+| ..+++.|. +|+++++.+ +++ .+++.
T Consensus 142 ~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~-~~~~~ 219 (409)
T 3h8l_A 142 ESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLS-DLSPN 219 (409)
T ss_dssp HHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SST-TBCHH
T ss_pred HHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-ccc-ccCHH
Confidence 432 6777999992 466766 45667774 899999988 665 47899
Q ss_pred HHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhc--CCeecCCcEEeC
Q 011267 251 LAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV--GLNSSVGGIQVD 328 (489)
Q Consensus 251 ~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~--gl~~~~g~i~vd 328 (489)
+.+.+.+.+++.||++++ ++.|++++.+ .|++++|+++++|.||+++|.+|+ ++++.+ ++..++|++.||
T Consensus 220 ~~~~~~~~l~~~gV~~~~-~~~v~~i~~~------~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l~~~~G~i~vd 291 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVH-NFKIKEIREH------EIVDEKGNTIPADITILLPPYTGN-PALKNSTPDLVDDGGFIPTD 291 (409)
T ss_dssp HHHHHHHHHHHHTCEEEC-SCCEEEECSS------EEEETTSCEEECSEEEEECCEECC-HHHHTSCGGGSCTTSCBCBB
T ss_pred HHHHHHHHHHHCCCEEEc-CCceEEECCC------eEEECCCCEEeeeEEEECCCCCcc-HHHHhccccCcCCCCCEEeC
Confidence 999999999999999999 9999999732 478899999999999999999998 678887 554446779999
Q ss_pred CCCCC-CCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011267 329 GQFRT-RMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 329 ~~~~t-~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
+++|| +.|||||+|||+..+.+ ..+..|..||+.+|+||.+
T Consensus 292 ~~~~~~~~~~vfa~GD~~~~~~~--------~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 292 LNMVSIKYDNVYAVGDANSMTVP--------KLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp TTSBBSSCTTEEECGGGBTTCCS--------CCHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCEEEeehhccCCCC--------cHHHHHHHHHHHHHHHHHH
Confidence 99999 99999999999986432 2456688999999999875
No 72
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=5.2e-35 Score=298.56 Aligned_cols=304 Identities=18% Similarity=0.187 Sum_probs=221.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 51 NREFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
++||||||||+||++||..|++ .+. +|+|||++++++|. |.+.. +... ......+ .....
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~---~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~l~ 66 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGH---EVTLISANDYFQFV-PSNPW-VGVG-WKERDDI-----------AFPIR 66 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGS---EEEEECSSSEEECG-GGHHH-HHHT-SSCHHHH-----------EEECH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcC---EEEEEeCCCCCccc-CCccc-cccC-ccCHHHH-----------HHHHH
Confidence 5799999999999999999999 544 89999999876664 32211 1110 0000011 13456
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCC--CceEeecCHHHHHHHHHhhc
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL--PGVHYIRDVADADALISSLE 205 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~--~gv~~~~~~~~~~~~~~~~~ 205 (489)
+++++.+++++. .+|+.++++.++|.+++|+++.||+||+|||+.+. .+.++|... ...+.+.+..++..+.+.+.
T Consensus 67 ~~~~~~gv~~~~-~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~-~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~ 144 (437)
T 3sx6_A 67 HYVERKGIHFIA-QSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA-FENVPGSDPHEGPVQSICTVDHAERAFAEYQ 144 (437)
T ss_dssp HHHHTTTCEEEC-SCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC-GGGSTTCSTTTSSEECCSSHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEE-eEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC-cccCCCCCcccCcceecccccHHHHHHHHHH
Confidence 778889999986 69999999999999999999999999999999886 455566543 24455667777766655332
Q ss_pred ---CCCcEEEECCCHH----H--HHHH----HHHHhCCCc-----EEEEccCCcchhhhh--CHHHHHHHHHHHHhcCcE
Q 011267 206 ---KAKKVVVVGGGYI----G--MEVA----AAAVGWKLD-----TTIIFPENHLLQRLF--TPSLAQRYEQLYQQNGVK 265 (489)
Q Consensus 206 ---~~~~vvViG~G~~----g--~e~A----~~l~~~g~~-----V~lv~~~~~~l~~~~--~~~~~~~l~~~l~~~Gv~ 265 (489)
..++++|||+|.. | +|+| ..+++.|.+ |+++++.+.+....+ .+...+.+.+.+++.||+
T Consensus 145 ~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~ 224 (437)
T 3sx6_A 145 ALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIE 224 (437)
T ss_dssp HHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCE
T ss_pred HHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCE
Confidence 2556788888543 4 7777 666777875 999999987733211 135778889999999999
Q ss_pred EEEcCceEEEEEeCCCCcEEEEEeCC-----CcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCC-CCCCeE
Q 011267 266 FVKVGASIKNLEAGSDGRVAAVKLED-----GSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRT-RMPGIF 339 (489)
Q Consensus 266 ~~~~~~~v~~i~~~~~~~v~~v~~~~-----g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t-~~~~Iy 339 (489)
+++ ++.|++++. ++........+ ++++++|.+++++|.+|+..+.+..++..++|+|.||+++|| ++||||
T Consensus 225 ~~~-~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~If 301 (437)
T 3sx6_A 225 AYT-NCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIF 301 (437)
T ss_dssp EEC-SEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEE
T ss_pred EEc-CCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEE
Confidence 999 999999973 22111111223 567999999999999988555555677555678999999999 999999
Q ss_pred EeccccccCCccCCcc---cccccHHHHHHHHHHHHHHHhc
Q 011267 340 AIGDVAAFPLKMYDRT---ARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 340 a~GD~a~~~~~~~~~~---~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
|+|||+..+... +.. ....+...|..||+.+|.||..
T Consensus 302 a~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~ 341 (437)
T 3sx6_A 302 AAGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKA 341 (437)
T ss_dssp ECGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999876421 111 1134677799999999999975
No 73
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=3.9e-34 Score=281.63 Aligned_cols=301 Identities=19% Similarity=0.242 Sum_probs=204.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccc-cCCCCCCCCh
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTP 127 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 127 (489)
++++||+|||||++|+++|..|++.|+ +|+|||+... .. ......+.... ....+++++.. ..........
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~---~v~lie~~~~--~~-~~~gg~~~~~~--~~~~~~~~~~~~~~~~~~~~l~ 77 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAEL---KPLLFEGWMA--ND-IAPGGQLTTTT--DVENFPGFPEGILGVELTDKFR 77 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSB--TT-BCTTCGGGGCS--EECCSTTCTTCEEHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeccCc--cc-cCCCceeeecc--ccccCCCCccCCCHHHHHHHHH
Confidence 345799999999999999999999886 6999998210 00 00000011000 00011111100 0000011223
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCC-CceEeecCHHHHHHHHHhh
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL-PGVHYIRDVADADALISSL 204 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~-~gv~~~~~~~~~~~~~~~~ 204 (489)
+++++.+++++.+. |..++.+.+ +|.+ ++.++.||+||+|||+.|.. |..++... .+.+..+.+.........+
T Consensus 78 ~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 154 (333)
T 1vdc_A 78 KQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR-LSFVGSGEVLGGFWNRGISACAVCDGAA 154 (333)
T ss_dssp HHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC-CCCBTCSSSSSCCBTTTEESCHHHHTTS
T ss_pred HHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC-CCCCCccccccccccCcEEEeccCccch
Confidence 45567899999874 889987655 6666 78889999999999998763 44555432 1111111111111222222
Q ss_pred --cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCC
Q 011267 205 --EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDG 282 (489)
Q Consensus 205 --~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~ 282 (489)
..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+ ..+.+++.||++++ +++++++..++++
T Consensus 155 ~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~---~~~~~~~~gv~i~~-~~~v~~i~~~~~~ 227 (333)
T 1vdc_A 155 PIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIM---QQRALSNPKIDVIW-NSSVVEAYGDGER 227 (333)
T ss_dssp GGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEEC-SEEEEEEEESSSS
T ss_pred hhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHH---HHHHHhCCCeeEec-CCceEEEeCCCCc
Confidence 5689999999999999999999999999999999987643 2222 22456788999999 9999999854321
Q ss_pred -cEEEEEeC---CC--cEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCC-CCCCCCCeEEeccccccCCccCCc
Q 011267 283 -RVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKMYDR 354 (489)
Q Consensus 283 -~v~~v~~~---~g--~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~-~~t~~~~Iya~GD~a~~~~~~~~~ 354 (489)
++..+.+. +| +++++|.||+|+|++|++++++ .+++.+ +|++.||++ ++|+.|+|||+|||+..+..
T Consensus 228 ~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~---- 302 (333)
T 1vdc_A 228 DVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYR---- 302 (333)
T ss_dssp SSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCC----
T ss_pred cceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhcccCCCCEEEeeeccCCCch----
Confidence 55556664 45 5799999999999999998876 467665 577999997 68999999999999986421
Q ss_pred ccccccHHHHHHHHHHHHHHHhc
Q 011267 355 TARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 355 ~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.+..|..+|+.+|.+|..
T Consensus 303 -----~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 303 -----QAITAAGTGCMAALDAEH 320 (333)
T ss_dssp -----CHHHHHHHHHHHHHHHHH
T ss_pred -----hHHHHHHhHHHHHHHHHH
Confidence 456688888888888753
No 74
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=4.4e-33 Score=289.92 Aligned_cols=287 Identities=22% Similarity=0.306 Sum_probs=209.7
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-CCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-RPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
+..+||+|||||+||++||.+|++.|. +|+|||+.....+. ..... .+..++...+........
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~---~v~lie~~~GG~~~~~~~~~------------~~~~~~~~~~~~l~~~l~ 274 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGI---RTGLMGERFGGQVLDTVDIE------------NYISVPKTEGQKLAGALK 274 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSTTGGGTTCSCBC------------CBTTBSSBCHHHHHHHHH
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCC---eEEEEECCCCCccccccccc------------ccCCCCCCCHHHHHHHHH
Confidence 356899999999999999999999986 69999864211000 00000 011000000000011223
Q ss_pred hHHHHCCcEEEeCCcEEEEeCC-----CCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCC---CCceEeecCHHHHHH
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADA 199 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~-----~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~---~~gv~~~~~~~~~~~ 199 (489)
+.+++++++++.+++|..++++ ...|.+.+|.++.||+||+|||+.+.. +..+|.. ..+++++....
T Consensus 275 ~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~-~~ipG~~~~~~~~v~~~~~~~---- 349 (521)
T 1hyu_A 275 AHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN-MNVPGEDQYRTKGVTYCPHCD---- 349 (521)
T ss_dssp HHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC-CCCTTTTTTTTTTEECCTTCC----
T ss_pred HHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC-CCCCChhhhcCceEEEeecCc----
Confidence 4556789999999899999864 457888899899999999999998763 4445532 13454443211
Q ss_pred HHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHh-cCcEEEEcCceEEEEEe
Q 011267 200 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKVGASIKNLEA 278 (489)
Q Consensus 200 ~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~-~Gv~~~~~~~~v~~i~~ 278 (489)
.....+++++|||+|.+|+|+|..|++.+.+|+++++.+++.. + ..+.+.+++ .||++++ ++.++++..
T Consensus 350 --~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~-~~~v~~i~~ 419 (521)
T 1hyu_A 350 --GPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIIL-NAQTTEVKG 419 (521)
T ss_dssp --GGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEEC-SEEEEEEEE
T ss_pred --hhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEe-CCEEEEEEc
Confidence 1234689999999999999999999999999999999987754 2 245566777 6999999 999999985
Q ss_pred CCCCcEEEEEeCC---Cc--EEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCCCCCCCeEEeccccccCCccC
Q 011267 279 GSDGRVAAVKLED---GS--TIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFRTRMPGIFAIGDVAAFPLKMY 352 (489)
Q Consensus 279 ~~~~~v~~v~~~~---g~--~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~ 352 (489)
+ ++++..+.+.+ |+ ++++|.|++++|.+|++++++. .++.+ +|+|.||+++||++|+|||+|||+..+..
T Consensus 420 ~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~~-- 495 (521)
T 1hyu_A 420 D-GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPYK-- 495 (521)
T ss_dssp C-SSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSSC--
T ss_pred C-CCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeCCCCCCCCCCEEEeecccCCCcc--
Confidence 3 45666677653 53 6899999999999999998876 36655 57899999999999999999999986532
Q ss_pred CcccccccHHHHHHHHHHHHHHHh
Q 011267 353 DRTARVEHVDHARQSAQHCIKALL 376 (489)
Q Consensus 353 ~~~~~~~~~~~A~~~g~~~a~~l~ 376 (489)
.+..|+.+|..+|.++.
T Consensus 496 -------~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 496 -------QIIIATGEGAKASLSAF 512 (521)
T ss_dssp -------CHHHHHHHHHHHHHHHH
T ss_pred -------eeeehHHhHHHHHHHHH
Confidence 44568888888888775
No 75
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-33 Score=277.02 Aligned_cols=288 Identities=18% Similarity=0.299 Sum_probs=201.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccc-cCCCCCCCCh
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTP 127 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 127 (489)
++++||+|||||+||+++|..|++.|+ +|+|||+..... . +.... ....++++... ..........
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~gg-~-------~~~~~--~~~~~~~~~~~~~~~~~~~~l~ 78 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQL---APLVFEGTSFGG-A-------LMTTT--DVENYPGFRNGITGPELMDEMR 78 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTC---CCEEECCSSCSC-G-------GGSCS--CBCCSTTCTTCBCHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCCC-c-------eeccc--hhhhcCCCCCCCCHHHHHHHHH
Confidence 456899999999999999999999876 699999652110 0 11000 00011111100 0000011223
Q ss_pred hHHHHCCcEEEeCCcEEEEeCC-CCEE-EeCCCeEEeeCcEEecCCCCCCCCCCCCCCC---CCceEeecCHHHHHHHHH
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIE-KQTL-ITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALIS 202 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~-~~~v-~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~---~~gv~~~~~~~~~~~~~~ 202 (489)
+++++.+++++.+. |..++.. ..++ .+.+|.++.||+||+|||+.|. .|..+|.. ..+++.+. ....
T Consensus 79 ~~~~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~-~~~i~g~~~~~~~~~~~~~------~~~~ 150 (335)
T 2a87_A 79 EQALRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR-YLQVPGEQELLGRGVSSCA------TCDG 150 (335)
T ss_dssp HHHHHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEEC-CCCCTHHHHTBTTTEESCH------HHHG
T ss_pred HHHHHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCcc-CCCCCchHhccCCceEEee------ccch
Confidence 45567899999874 9999873 2467 7788888999999999999876 34444321 12333221 2223
Q ss_pred hhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCC
Q 011267 203 SLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDG 282 (489)
Q Consensus 203 ~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~ 282 (489)
.+..+++++|||+|.+|+|+|..|.+.+.+|+++++.+++.. .+.+ ..+.+++.||++++ +++++++..+ +
T Consensus 151 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~---~~~~~~~~gV~v~~-~~~v~~i~~~--~ 221 (335)
T 2a87_A 151 FFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIM---LDRARNNDKIRFLT-NHTVVAVDGD--T 221 (335)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTH---HHHHHHCTTEEEEC-SEEEEEEECS--S
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHH---HHHHhccCCcEEEe-CceeEEEecC--C
Confidence 345689999999999999999999999999999999887643 1111 12445778999999 9999999843 3
Q ss_pred cEEEEEeC---CC--cEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCC-CCCCCCCeEEeccccccCCccCCcc
Q 011267 283 RVAAVKLE---DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQ-FRTRMPGIFAIGDVAAFPLKMYDRT 355 (489)
Q Consensus 283 ~v~~v~~~---~g--~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~-~~t~~~~Iya~GD~a~~~~~~~~~~ 355 (489)
.+..+.+. +| +++++|.||+|+|++|++++++ .+++.+ +|+|.||++ ++|+.|+|||+|||+..+..
T Consensus 222 ~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~----- 295 (335)
T 2a87_A 222 TVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYR----- 295 (335)
T ss_dssp SCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCC-----
T ss_pred cEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHH-----
Confidence 33345554 44 5799999999999999998886 567665 577999996 68999999999999985321
Q ss_pred cccccHHHHHHHHHHHHHHHh
Q 011267 356 ARVEHVDHARQSAQHCIKALL 376 (489)
Q Consensus 356 ~~~~~~~~A~~~g~~~a~~l~ 376 (489)
.+..|..+|+.+|.++.
T Consensus 296 ----~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 296 ----QAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp ----CHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHhHHHHHHHHH
Confidence 44557788888888775
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3.2e-33 Score=279.04 Aligned_cols=308 Identities=17% Similarity=0.201 Sum_probs=206.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC------CCCCCCCCCccccC---CCCCCCC-CCCCCCcccc-
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA------YAPYERPALTKGYL---FPLDKKP-ARLPGFHTCV- 118 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~------~~~y~~~~l~~~~~---~~~~~~~-~~~~~~~~~~- 118 (489)
+++||+|||||+||+++|.+|++.|. . +|+|||+++ ..+.....+...+. +...... ......+...
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~-~-~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGI-T-DVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-C-CEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCC-C-cEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccc
Confidence 45799999999999999999999876 2 799999986 11111000000000 0000000 0000000000
Q ss_pred CCC------CCCCChhHHHHCCcEEEeCCcEEEEeCCC--CEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEe
Q 011267 119 GSG------GERQTPEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHY 190 (489)
Q Consensus 119 ~~~------~~~~~~~~~~~~~i~~~~~~~V~~id~~~--~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~ 190 (489)
... .......++++.+++++.+++|+.++++. ..|.+.++ ++.||+||+|||+.+. |..++ ..+.+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~--p~ip~---~~~~~ 154 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF--PKKPF---KYGIH 154 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS--BCCCS---SSCEE
T ss_pred cccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc--cCCCC---Cceec
Confidence 000 00011234466899999999999998763 46777666 5899999999999764 33333 11222
Q ss_pred ecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh------hhCHHHHHHHHHHHHhcC-
Q 011267 191 IRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSLAQRYEQLYQQNG- 263 (489)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------~~~~~~~~~l~~~l~~~G- 263 (489)
..++.+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++. .+++...+.+.+.+++.|
T Consensus 155 ~~~~~~~~-----~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~ 229 (369)
T 3d1c_A 155 YSEIEDFD-----NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGAR 229 (369)
T ss_dssp GGGCSCGG-----GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCC
T ss_pred hhhcCChh-----hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCc
Confidence 22111111 124679999999999999999999999999999999887742 245777889999999997
Q ss_pred cEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEE-cCEEEEccCCCCCCchhhhcCCeecCCcEEeCCC-CCCCCCCeEEe
Q 011267 264 VKFVKVGASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQ-FRTRMPGIFAI 341 (489)
Q Consensus 264 v~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~-aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~-~~t~~~~Iya~ 341 (489)
|++++ ++.|++++..+ +. ..+.+.+|+++. +|.||+|+|++|+++++.+.+++.++|.+.||++ ++|++|+|||+
T Consensus 230 v~~~~-~~~v~~i~~~~-~~-~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~ 306 (369)
T 3d1c_A 230 IEMNV-HYTVKDIDFNN-GQ-YHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPNIFMI 306 (369)
T ss_dssp EEEEC-SCCEEEEEEET-TE-EEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTTEEEC
T ss_pred EEEec-CcEEEEEEecC-Cc-eEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCCeEEe
Confidence 99999 99999996432 22 357788887765 6999999999999877776666644566999985 67899999999
Q ss_pred ccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 011267 342 GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 379 (489)
Q Consensus 342 GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~ 379 (489)
|||+..+.... ..+..+.++|+.+|++|.+..
T Consensus 307 GD~~~~~~~~~------~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 307 GATVENDNAKL------CYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp STTCCCSSCCC------CSHHHHGGGHHHHHHHHHHHT
T ss_pred ccccccCCeeE------EEEehhhHHHHHHHHHHhccc
Confidence 99998765432 134457788999999998643
No 77
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=8.3e-34 Score=281.48 Aligned_cols=300 Identities=17% Similarity=0.233 Sum_probs=195.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCC-------CC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGS-------GG 122 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 122 (489)
+++||+|||||++|+++|..|++.|+ +|+|||+++...-...................++++...... ..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~---~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGL---SYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEV 78 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSC---CEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHH
Confidence 45799999999999999999999987 699999987542110000000000000000011111000000 00
Q ss_pred CCCChhHHHHCCcEEEeCCcEEEEeCCCCE---EEeCCCeEEeeCcEEecCCC--CCCCCCCCCCCC-CCce-EeecCHH
Q 011267 123 ERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LPGV-HYIRDVA 195 (489)
Q Consensus 123 ~~~~~~~~~~~~i~~~~~~~V~~id~~~~~---v~~~~g~~i~yd~lvlATG~--~~~~~p~~~g~~-~~gv-~~~~~~~ 195 (489)
.....+++++.+++++.+++|+.++.+... |.+.+| ++.||+||+|||. .|. .|..+|.. ..+. .....+.
T Consensus 79 ~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~-~~~~~g~~~~~~~~~~~~~~~ 156 (357)
T 4a9w_A 79 LAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAY-TPEYQGLESFAGIQLHSAHYS 156 (357)
T ss_dssp HHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBC-CCCCTTGGGCCSEEEEGGGCC
T ss_pred HHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCC-CCCCCCccccCCcEEEeccCC
Confidence 011233456679999999999999987765 677777 7999999999996 333 34444422 1111 1111111
Q ss_pred HHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccC-Ccchhhhh-CHHHHHHHHHHHH-------------
Q 011267 196 DADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHLLQRLF-TPSLAQRYEQLYQ------------- 260 (489)
Q Consensus 196 ~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~-~~~l~~~~-~~~~~~~l~~~l~------------- 260 (489)
+ .....+++++|||+|.+|+|+|..|.+.+ +|+++.+. +.+++..+ +..+.+.+.+.+.
T Consensus 157 ~-----~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (357)
T 4a9w_A 157 T-----PAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPG 230 (357)
T ss_dssp C-----SGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC-------------------
T ss_pred C-----hhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccc
Confidence 1 11235789999999999999999999998 69999987 56655432 2333333333322
Q ss_pred ---------------hcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcE
Q 011267 261 ---------------QNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGI 325 (489)
Q Consensus 261 ---------------~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i 325 (489)
+.|+ +.. +..++++... .+.+.+|+++++|.||+|+|++|++++++.+++..++|+|
T Consensus 231 ~~~~~~~~~~~~~~~~~g~-i~~-~~~v~~~~~~------~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G~i 302 (357)
T 4a9w_A 231 GFGDIVMVPPVLDARARGV-LAA-VPPPARFSPT------GMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQGQV 302 (357)
T ss_dssp ---CBCCCHHHHHHHHTTC-CCE-ECCCSEEETT------EEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTSCB
T ss_pred cccCcccChhHHHHHhcCc-eEE-ecCcceEeCC------eeEECCCCEecCCEEEECCCcCCCCcccCcccccCCCCCc
Confidence 3454 455 5677777632 5788999999999999999999999999999999667789
Q ss_pred EeCCC--CCCCCCCeEEec--cccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011267 326 QVDGQ--FRTRMPGIFAIG--DVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 326 ~vd~~--~~t~~~~Iya~G--D~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.||++ ++|+.|+|||+| ||+..... ....|..+|+.+|.+|..
T Consensus 303 ~vd~~~l~~t~~~~vya~Gd~d~~~~~~~---------~~~~A~~~g~~~a~~i~~ 349 (357)
T 4a9w_A 303 EVDGSGLRALAVPSVWLLGYGDWNGMASA---------TLIGVTRYAREAVRQVTA 349 (357)
T ss_dssp CBCTTSCBBSSCTTEEECSSCGGGSTTCS---------STTTHHHHHHHHHHHHHH
T ss_pred cccCCcccCCCCCCeEEeccccccccchh---------hhhhhHHHHHHHHHHHHH
Confidence 99999 899999999999 56652211 222377788888888764
No 78
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=2.4e-33 Score=285.71 Aligned_cols=298 Identities=19% Similarity=0.194 Sum_probs=212.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
++||||||||+||+++|.+|++.+. +.+|+|||+++.+.|. |.+.. +... ......+ .....+++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~~~~-~~~~~-~~~g-~~~~~~~-----------~~~~~~~~ 66 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGFT-PAFPH-LAMG-WRKFEDI-----------SVPLAPLL 66 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEECG-GGHHH-HHHT-CSCGGGS-----------EEESTTTG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCCCcC-CCcch-hccC-ccCHHHH-----------HHHHHHHH
Confidence 4799999999999999999999542 4589999999887664 32221 1110 0001111 12334556
Q ss_pred HHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCc-eEeecCHHHHHHHHHhh---cC
Q 011267 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG-VHYIRDVADADALISSL---EK 206 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~g-v~~~~~~~~~~~~~~~~---~~ 206 (489)
++.+++++. .+|+.++++.+.+.++++.++.||+||+|||+.+. .| +....+ ...+.+..++.++.+.+ ..
T Consensus 67 ~~~gv~~~~-~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~-~p---g~~~~g~~~~~~~~~~a~~~~~~~~~~~~ 141 (430)
T 3h28_A 67 PKFNIEFIN-EKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FG---AEGQEENSTSICTAEHALETQKKLQELYA 141 (430)
T ss_dssp GGGTEEEEC-SCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CC---SBTHHHHSCCCSSHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEE-EEEEEEECCCCEEEECCCcEEECCEEEEcCCcccc-cC---CCCCcCCccCcCCHHHHHHHHHHHHHHHh
Confidence 778999997 49999999999999999999999999999999875 33 211111 22345556665554432 23
Q ss_pred CCcEEEECCCHHH------HHHH----HHHHhCC----CcEEEEccCCcchhhhh--CHHHHHHHHHHHHhcCcEEEEcC
Q 011267 207 AKKVVVVGGGYIG------MEVA----AAAVGWK----LDTTIIFPENHLLQRLF--TPSLAQRYEQLYQQNGVKFVKVG 270 (489)
Q Consensus 207 ~~~vvViG~G~~g------~e~A----~~l~~~g----~~V~lv~~~~~~l~~~~--~~~~~~~l~~~l~~~Gv~~~~~~ 270 (489)
.++++|||+|..+ +|+| ..+++.| .+|+++++.+.+....+ .+...+.+.+.+++.||++++ +
T Consensus 142 ~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~-~ 220 (430)
T 3h28_A 142 NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIA-N 220 (430)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEEC-S
T ss_pred cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEe-C
Confidence 4567888887543 7777 5556677 47999999887632111 235778888999999999999 9
Q ss_pred ceEEEEEeCCCCcEEEEEeCC----CcEEEcCEEEEccCCCCCCchhhh--cCCeecCC-cEEeCCCCCC-CCCCeEEec
Q 011267 271 ASIKNLEAGSDGRVAAVKLED----GSTIDADTIVIGIGAKPTVSPFER--VGLNSSVG-GIQVDGQFRT-RMPGIFAIG 342 (489)
Q Consensus 271 ~~v~~i~~~~~~~v~~v~~~~----g~~i~aD~vi~a~G~~p~~~~~~~--~gl~~~~g-~i~vd~~~~t-~~~~Iya~G 342 (489)
+.|++++.+ .+++++ ++++++|.+++++|.+|+ .++.+ +++..++| +|.||+++|| ++|||||+|
T Consensus 221 ~~v~~v~~~------~v~~~~~~~~g~~i~~D~vv~a~G~~~~-~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~G 293 (430)
T 3h28_A 221 VAVKAIEPD------KVIYEDLNGNTHEVPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVG 293 (430)
T ss_dssp CEEEEECSS------EEEEECTTSCEEEEECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECS
T ss_pred CEEEEEeCC------eEEEEecCCCceEEeeeEEEECCCCccc-hhHhhccccCcCCCCCEEecCccccCCCCCCEEEEE
Confidence 999999632 245555 678999999999999987 45555 57755567 7999999999 999999999
Q ss_pred cccccCCccCCccc---ccccHHHHHHHHHHHHHHHhc
Q 011267 343 DVAAFPLKMYDRTA---RVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 343 D~a~~~~~~~~~~~---~~~~~~~A~~~g~~~a~~l~~ 377 (489)
||+..+... +... ...+...|..+|+.+|+||..
T Consensus 294 D~~~~~~~~-~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 294 VVTAIPPIE-KTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TTBCCCCSS-CCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eeeccCCcc-CCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 999875421 1110 133567799999999999875
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.98 E-value=9.9e-33 Score=282.33 Aligned_cols=291 Identities=16% Similarity=0.173 Sum_probs=199.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..+||+|||||+||++||..|++.|. +.+|+|||+++.. |.. +..+ ..+.......+ .....++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~vie~~~~~-gg~--~~~g-~~p~~~~~~~~-----------~~~~~~~ 68 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHS-RAHVDIYEKQLVP-FGL--VRFG-VAPDHPEVKNV-----------INTFTQT 68 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCS-SCEEEEECSSSSS-CTH--HHHT-SCTTCGGGGGH-----------HHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCC-CCCEEEEeCCCcC-Cce--eecc-cCCCCccHHHH-----------HHHHHHH
Confidence 46799999999999999999999883 5689999998764 321 1110 00100000000 1123455
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHH----HHHh--
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADA----LISS-- 203 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~----~~~~-- 203 (489)
+++.+++++.+..+ .+.|.+.+. ++.||+||+|||+.+...|.++|.+.+++++.+++....+ ....
T Consensus 69 ~~~~gv~~~~~~~v------~~~V~~~~~-~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~ 141 (460)
T 1cjc_A 69 ARSDRCAFYGNVEV------GRDVTVQEL-QDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAP 141 (460)
T ss_dssp HTSTTEEEEBSCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCC
T ss_pred HHhCCcEEEeeeEE------eeEEEeccc-eEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCcccccccc
Confidence 66789999988655 233444433 3689999999999963356677877788877654421100 0000
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHH--------------------hCCC-cEEEEccCCcch--------------hh---
Q 011267 204 LEKAKKVVVVGGGYIGMEVAAAAV--------------------GWKL-DTTIIFPENHLL--------------QR--- 245 (489)
Q Consensus 204 ~~~~~~vvViG~G~~g~e~A~~l~--------------------~~g~-~V~lv~~~~~~l--------------~~--- 245 (489)
...+++++|||+|++|+|+|..|. +.+. +|+++.+++.+. +.
T Consensus 142 ~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~ 221 (460)
T 1cjc_A 142 DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRP 221 (460)
T ss_dssp CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCcee
Confidence 014789999999999999999998 5677 799999987651 10
Q ss_pred -----hh----------CH---HHHHHHHHHHHh--------------cCcEEEEcCceEEEEEeCCCC-cEEEEEeC--
Q 011267 246 -----LF----------TP---SLAQRYEQLYQQ--------------NGVKFVKVGASIKNLEAGSDG-RVAAVKLE-- 290 (489)
Q Consensus 246 -----~~----------~~---~~~~~l~~~l~~--------------~Gv~~~~~~~~v~~i~~~~~~-~v~~v~~~-- 290 (489)
.+ +. .+.+.+.+.+++ +||++++ ++.+++|..++++ ++..|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~-~~~~~~i~~~~~~~~v~~v~~~~~ 300 (460)
T 1cjc_A 222 MLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRF-FRSPQQVLPSPDGRRAAGIRLAVT 300 (460)
T ss_dssp ECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEEC-SEEEEEEEECTTSSSEEEEEEEEE
T ss_pred EechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEEC-CCChheEEcCCCCceEEEEEEEEE
Confidence 01 11 133444455555 8999999 9999999854335 66556553
Q ss_pred -------------CC--cEEEcCEEEEccCCCCCCchhhhcCC-eec-CCcEEeCCCCCCC-CCCeEEeccccccCCccC
Q 011267 291 -------------DG--STIDADTIVIGIGAKPTVSPFERVGL-NSS-VGGIQVDGQFRTR-MPGIFAIGDVAAFPLKMY 352 (489)
Q Consensus 291 -------------~g--~~i~aD~vi~a~G~~p~~~~~~~~gl-~~~-~g~i~vd~~~~t~-~~~Iya~GD~a~~~~~~~ 352 (489)
+| ++++||.||+++|++|+. + .|+ +.+ ++++.||+++||+ .|+|||+|||+..+..
T Consensus 301 ~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l---~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~-- 374 (460)
T 1cjc_A 301 RLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I---DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTG-- 374 (460)
T ss_dssp EEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C---CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTC--
T ss_pred EEccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C---CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCc--
Confidence 34 579999999999999996 3 567 665 5789999999998 7999999999975432
Q ss_pred CcccccccHHHHHHHHHHHHHHHhc
Q 011267 353 DRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 353 ~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.+..|+.+|..+|.+|++
T Consensus 375 -------~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 375 -------VITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp -------CHHHHHHHHHHHHHHHHH
T ss_pred -------cHHHHHHHHHHHHHHHHH
Confidence 244577778888877764
No 80
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=1.1e-32 Score=297.39 Aligned_cols=303 Identities=16% Similarity=0.175 Sum_probs=204.4
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
..+.+||||||||+||++||..|++.|+ +|+|||+++..... +... ..+|+... .....
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~G~---~Vtlie~~~~~GG~-------~~~~-----~~~pg~~~------~~~~~ 444 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMESGY---TVHLTDTAEKIGGH-------LNQV-----AALPGLGE------WSYHR 444 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSTTTT-------HHHH-----TTSTTCGG------GHHHH
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCcCCe-------eeec-----ccCCChHH------HHHHH
Confidence 3457899999999999999999999987 69999998764321 0000 00111110 01111
Q ss_pred hHHHHCCcEEE--eCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCC-------CCCCCCCCC--CCceEeecCHHH
Q 011267 128 EWYKEKGIEMI--YQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS-------RFPEKIGGY--LPGVHYIRDVAD 196 (489)
Q Consensus 128 ~~~~~~~i~~~--~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~-------~~p~~~g~~--~~gv~~~~~~~~ 196 (489)
+++.+ .++.+ ....+..++. ++.+.++++.++.||+||+|||+.+. ..+.++|.+ .+++++. .+
T Consensus 445 ~~~~~-~i~~~~~~~~~~v~i~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~---~~ 519 (729)
T 1o94_A 445 DYRET-QITKLLKKNKESQLALG-QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTP---EQ 519 (729)
T ss_dssp HHHHH-HHHHHHHHSTTCEEECS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECH---HH
T ss_pred HHHHH-HHHHhhcccCCceEEEe-CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEH---HH
Confidence 22211 11111 1112233333 23455555566899999999999842 234455644 4455443 22
Q ss_pred HHHHHHhhcCCCcEEEEC--CCHHHHHHHHHHHhCCCcEEEEccCCcchhh-hhCHHHHHHHHHHHHhcCcEEEEcCceE
Q 011267 197 ADALISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-LFTPSLAQRYEQLYQQNGVKFVKVGASI 273 (489)
Q Consensus 197 ~~~~~~~~~~~~~vvViG--~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~~l~~~l~~~Gv~~~~~~~~v 273 (489)
. +......+++|+||| +|++|+|+|..|+++|.+|+++++.+ ++++ .++.. ...+.+.+++.||++++ ++.+
T Consensus 520 ~--l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~-~~~v 594 (729)
T 1o94_A 520 V--MDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELG-DHFC 594 (729)
T ss_dssp H--HHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEEC-SEEE
T ss_pred H--hcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEc-CcEE
Confidence 2 222334578999999 99999999999999999999999998 6653 23333 45677889999999999 9999
Q ss_pred EEEEeCCCCcEEEEEeCCC-cE------------------EEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCC
Q 011267 274 KNLEAGSDGRVAAVKLEDG-ST------------------IDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTR 334 (489)
Q Consensus 274 ~~i~~~~~~~v~~v~~~~g-~~------------------i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~ 334 (489)
+++.. ++......+.++ ++ ++||.||+|+|.+|++++++.++. .+|++++|+
T Consensus 595 ~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~-------~vd~~~~t~ 665 (729)
T 1o94_A 595 SRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKA-------RESEWAEND 665 (729)
T ss_dssp EEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHH-------TGGGTGGGT
T ss_pred EEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHHHhh-------hcccccccC
Confidence 99973 221111111233 33 999999999999999988776532 267899999
Q ss_pred CCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCCCCCCCcCCceeeecccccCCCcceeeeeecCC
Q 011267 335 MPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDN 411 (489)
Q Consensus 335 ~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~G~~ 411 (489)
+|+|||+|||+.. ..+..|..+|+.+|.+|.+. ..+...|| |++++++. +|++|..
T Consensus 666 ~~~VyAiGD~~~~-----------~~~~~A~~~G~~aA~~i~~~--l~~~~~p~-~~~~~~~~-------~~~~~~~ 721 (729)
T 1o94_A 666 IKGIYLIGDAEAP-----------RLIADATFTGHRVAREIEEA--NPQIAIPY-KRETIAWG-------TPHMPGG 721 (729)
T ss_dssp CCEEEECGGGTSC-----------CCHHHHHHHHHHHHHTTTSS--CTTSCCCC-CCCCCCTT-------CCSSTTC
T ss_pred CCCeEEEeCccch-----------hhHHHHHHHHHHHHHHhhhh--cccCCCCe-eeecccCc-------ccccCCC
Confidence 9999999999862 14567999999999999753 35667888 78888764 5667643
No 81
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=7.1e-31 Score=290.78 Aligned_cols=280 Identities=15% Similarity=0.167 Sum_probs=205.2
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
.+||||||||+||++||.+|++.|+ +|+|||+++.........++.++ .+... .++.....+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~---~V~lie~~~~~GG~~~~~~k~~i----------~~~~~---~~~~~~~~~~l 191 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGA---RVMLLDERAEAGGTLLDTAGEQI----------DGMDS---SAWIEQVTSEL 191 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSSGGGGGSSCCEE----------TTEEH---HHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCCCCceeccCCcccc----------CCCCH---HHHHHHHHHHH
Confidence 5799999999999999999999986 79999998764311000011011 10000 00001112223
Q ss_pred HH-CCcEEEeCCcEEEEeCCCCEEEe-----------------CCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeec
Q 011267 131 KE-KGIEMIYQDPVTSIDIEKQTLIT-----------------NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIR 192 (489)
Q Consensus 131 ~~-~~i~~~~~~~V~~id~~~~~v~~-----------------~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~ 192 (489)
.+ .+++++.+++|..++.++....+ .++.++.||+||||||+.|+ .+.++|.+.+++++..
T Consensus 192 ~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~-~~~ipG~~~~gv~~~~ 270 (965)
T 2gag_A 192 AEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHER-PIVFENNDRPGIMLAG 270 (965)
T ss_dssp HHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEEC-CCCCBTCCSTTEEEHH
T ss_pred hhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccC-CCCCCCCCCCCEEEhH
Confidence 44 48999998899998875432111 11236899999999999986 4556787788887764
Q ss_pred CHHHHHHHHHh--hcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcC
Q 011267 193 DVADADALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVG 270 (489)
Q Consensus 193 ~~~~~~~~~~~--~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~ 270 (489)
+.. .+... ...+++++|||+|++|+|+|..|.++|.+|+++++.+++++. .+.+++.||++++ +
T Consensus 271 ~~~---~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~----------~~~l~~~GV~v~~-~ 336 (965)
T 2gag_A 271 AVR---SYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAA----------AAQAVADGVQVIS-G 336 (965)
T ss_dssp HHH---HHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCHH----------HHHHHHTTCCEEE-T
T ss_pred HHH---HHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccchh----------HHHHHhCCeEEEe-C
Confidence 332 33322 235689999999999999999999999999999999877642 4568899999999 9
Q ss_pred ceEEEEEeCCCCcEEEEEeCC-------C--cEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCC-----CCCC
Q 011267 271 ASIKNLEAGSDGRVAAVKLED-------G--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFR-----TRMP 336 (489)
Q Consensus 271 ~~v~~i~~~~~~~v~~v~~~~-------g--~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~-----t~~~ 336 (489)
+.++++...+++++..|++.+ | ++++||.||+++|++|++++++.. .+++.+|++++ |+.|
T Consensus 337 ~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~-----~g~i~vd~~~~~~v~~ts~p 411 (965)
T 2gag_A 337 SVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR-----QGKLDWDTTIHAFVPADAVA 411 (965)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT-----TCCEEEETTTTEEEECSCCT
T ss_pred CEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC-----CCcEEEcCcccccccCCCCC
Confidence 999999853245666677654 5 679999999999999999887765 35799999887 8999
Q ss_pred CeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011267 337 GIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 337 ~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
+|||+|||+..+. ...|..+|+.+|.+|++
T Consensus 412 ~IyAaGD~a~~~~-----------l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 412 NQHLAGAMTGRLD-----------TASALSTGAATGAAAAT 441 (965)
T ss_dssp TEEECGGGGTCCS-----------HHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCchh-----------HHHHHHHHHHHHHHHHH
Confidence 9999999997532 23588899999998864
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=9e-32 Score=274.92 Aligned_cols=286 Identities=17% Similarity=0.190 Sum_probs=193.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHH-c------CCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVE-H------GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGG 122 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~-~------g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (489)
+++||+|||||+||++||..|++ . +. +|+|||+++.+ |... ..+ ..+.......+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~---~V~lie~~~~~-gg~~--~~g-v~p~~~~~~~~----------- 63 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDM---AVDMLEMLPTP-WGLV--RSG-VAPDHPKIKSI----------- 63 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCE---EEEEEESSSSC-STHH--HHT-SCTTCTGGGGG-----------
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCC---eEEEEecCCCC-CCcc--ccc-cCCCCCCHHHH-----------
Confidence 46799999999999999999999 7 54 79999998763 3211 111 11110000000
Q ss_pred CCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCC-CCCCCCCCCCCCCceEeecCHHHHHH-H
Q 011267 123 ERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCT-ASRFPEKIGGYLPGVHYIRDVADADA-L 200 (489)
Q Consensus 123 ~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~-~~~~p~~~g~~~~gv~~~~~~~~~~~-~ 200 (489)
......++++.+++++.+..+ .+.|.+.++ ++.||+||+|||+. +. .+.++|.+.+++++.+++....+ .
T Consensus 64 ~~~~~~~~~~~~v~~~~~v~v------~~~v~~~~~-~~~~d~lViAtG~~~~~-~~~ipG~~~~gv~~~~~~~~~~~~~ 135 (456)
T 1lqt_A 64 SKQFEKTAEDPRFRFFGNVVV------GEHVQPGEL-SERYDAVIYAVGAQSDR-MLNIPGEDLPGSIAAVDFVGWYNAH 135 (456)
T ss_dssp HHHHHHHHTSTTEEEEESCCB------TTTBCHHHH-HHHSSEEEECCCCCEEC-CCCCTTTTSTTEEEHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCEEEeeEEE------CCEEEECCC-eEeCCEEEEeeCCCCCC-CCCCCCCCCCCcEEHHHHHhhhhcC
Confidence 122345566779999887543 234555555 47899999999997 44 45567776778776543321100 0
Q ss_pred H---Hhh--cCCCcEEEECCCHHHHHHHHHHHhC--------------------C-CcEEEEccCCcchhhhhCH-----
Q 011267 201 I---SSL--EKAKKVVVVGGGYIGMEVAAAAVGW--------------------K-LDTTIIFPENHLLQRLFTP----- 249 (489)
Q Consensus 201 ~---~~~--~~~~~vvViG~G~~g~e~A~~l~~~--------------------g-~~V~lv~~~~~~l~~~~~~----- 249 (489)
. ..+ ..+++++|||+|++|+|+|..|.+. + .+|+++.+++.+...+..+
T Consensus 136 ~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel 215 (456)
T 1lqt_A 136 PHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELREL 215 (456)
T ss_dssp GGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHG
T ss_pred cccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHh
Confidence 0 011 1478999999999999999999874 5 4899999987664321111
Q ss_pred -------------H------------------HHHHHHHHHHh------cCcEEEEcCceEEEEEeCCCCcEEEEEeC--
Q 011267 250 -------------S------------------LAQRYEQLYQQ------NGVKFVKVGASIKNLEAGSDGRVAAVKLE-- 290 (489)
Q Consensus 250 -------------~------------------~~~~l~~~l~~------~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~-- 290 (489)
+ +.+.+.+.+++ +||++++ ++.++++..+ +++..|++.
T Consensus 216 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~-~~~~~~i~~~--~~v~~v~~~~~ 292 (456)
T 1lqt_A 216 ADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRF-LTSPIEIKGK--RKVERIVLGRN 292 (456)
T ss_dssp GGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEEC-SEEEEEEECS--SSCCEEEEEEE
T ss_pred hcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEe-CCCCeEEecC--CcEeEEEEEEE
Confidence 1 13445555555 7999999 9999999843 444445543
Q ss_pred --------------CC--cEEEcCEEEEccCCCCCCchhhhcCCeec-CCcEEeCCCCC-CCCCCeEEeccccccCCccC
Q 011267 291 --------------DG--STIDADTIVIGIGAKPTVSPFERVGLNSS-VGGIQVDGQFR-TRMPGIFAIGDVAAFPLKMY 352 (489)
Q Consensus 291 --------------~g--~~i~aD~vi~a~G~~p~~~~~~~~gl~~~-~g~i~vd~~~~-t~~~~Iya~GD~a~~~~~~~ 352 (489)
+| ++++||.||+++|++|+. + .++..+ ++++.+|+++| |+.|+|||+|||+..+...
T Consensus 293 ~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~- 367 (456)
T 1lqt_A 293 ELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGV- 367 (456)
T ss_dssp EEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSC-
T ss_pred EecCCCcccccccCCCceEEEEcCEEEEccccccCC-C---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchh-
Confidence 34 469999999999999986 3 456555 57899999999 7999999999999755421
Q ss_pred CcccccccHHHHHHHHHHHHHHHhc
Q 011267 353 DRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 353 ~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
+..|+.+|..+|.+|++
T Consensus 368 --------i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 368 --------IGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp --------TTHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHHH
Confidence 22366777777777754
No 83
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=6.9e-31 Score=271.65 Aligned_cols=253 Identities=16% Similarity=0.167 Sum_probs=190.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
++||||||||+||++||++|++. + +|+|||+++..++.....+..+.. +++ . ......++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~---~V~vie~~~~~GG~~~~~~~~~~g--------~~~-~-------~~~~~~~l 167 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-L---TVALIEERGWLGGDMWLKGIKQEG--------FNK-D-------SRKVVEEL 167 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-C---CEEEECTTSSSSCSGGGTCSEETT--------TTE-E-------HHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-C---CEEEEeCCCCCCCeeeccccccCC--------CCC-C-------HHHHHHHH
Confidence 46999999999999999999998 5 799999998876654322211100 000 0 00011122
Q ss_pred H---HCCcEEEeCCcEEEEeCCCCEEEe---CCCe--EEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHH
Q 011267 131 K---EKGIEMIYQDPVTSIDIEKQTLIT---NSGK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALIS 202 (489)
Q Consensus 131 ~---~~~i~~~~~~~V~~id~~~~~v~~---~~g~--~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~ 202 (489)
. +.+++++.+++|..++.+.+.+.. .+++ ++.||+||+|||+.|. .+.+++.+.++++... +...+.+
T Consensus 168 ~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~-~~~~~g~~~~gv~~~~---~~~~~~~ 243 (493)
T 1y56_A 168 VGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS-TMLFENNDMPGVFRRD---FALEVMN 243 (493)
T ss_dssp HHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC-CCCCTTTTSTTEEEHH---HHHHHHH
T ss_pred HHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc-CCCCCCCCCCCEEEcH---HHHHHHH
Confidence 1 458899988888888877654332 4454 6899999999999987 4556787788887653 3444444
Q ss_pred h--hcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCC
Q 011267 203 S--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGS 280 (489)
Q Consensus 203 ~--~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~ 280 (489)
. ...+++++|+|+|++|+| +.+++.||++++ ++.|+++..
T Consensus 244 ~~~~~~~~~vvViGgG~~gle-----------------------------------~~l~~~GV~v~~-~~~v~~i~~-- 285 (493)
T 1y56_A 244 VWEVAPGRKVAVTGSKADEVI-----------------------------------QELERWGIDYVH-IPNVKRVEG-- 285 (493)
T ss_dssp TSCBCSCSEEEEESTTHHHHH-----------------------------------HHHHHHTCEEEE-CSSEEEEEC--
T ss_pred hcccCCCCEEEEECCCHHHHH-----------------------------------HHHHhCCcEEEe-CCeeEEEec--
Confidence 3 235689999999999988 446778999999 999999984
Q ss_pred CCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCee--c-CCcEE-eCCCCCCCCCCeEEeccccccCCccCCccc
Q 011267 281 DGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNS--S-VGGIQ-VDGQFRTRMPGIFAIGDVAAFPLKMYDRTA 356 (489)
Q Consensus 281 ~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~--~-~g~i~-vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~ 356 (489)
++.+..+.+.+|++++||.||+++|.+|++++++.+|++. + +|++. ||++++ +.|+|||+|||+..+
T Consensus 286 ~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~~-------- 356 (493)
T 1y56_A 286 NEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSIK-------- 356 (493)
T ss_dssp SSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCCC--------
T ss_pred CCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCcc--------
Confidence 3445567888999999999999999999999999999865 2 45576 899999 999999999999742
Q ss_pred ccccHHHHHHHHHHHHHHHhc
Q 011267 357 RVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 357 ~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.+..|..+|+.+|.++.+
T Consensus 357 ---~~~~A~~~g~~aa~~i~~ 374 (493)
T 1y56_A 357 ---PHYANYLEGKLVGAYILK 374 (493)
T ss_dssp ---CHHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHHH
Confidence 456688999999999875
No 84
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=8.6e-30 Score=261.46 Aligned_cols=289 Identities=15% Similarity=0.150 Sum_probs=193.7
Q ss_pred CcEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCC----CCC-CC-----------CccccCCCCCCCCCCCC
Q 011267 52 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAP----YER-PA-----------LTKGYLFPLDKKPARLP 112 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~li~~~~~~~----y~~-~~-----------l~~~~~~~~~~~~~~~~ 112 (489)
+||+|||||+||++||..|++ .|.+..+|+|||+++... |.. +. +...+..........++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 876212399999986542 211 00 00000000000000111
Q ss_pred CCcccc------C-----CCCCCCChhHHHHCCcE--EEeCCcEEEEeCCCC----EEEeCC---C--eEEeeCcEEecC
Q 011267 113 GFHTCV------G-----SGGERQTPEWYKEKGIE--MIYQDPVTSIDIEKQ----TLITNS---G--KLLKYGSLIVAT 170 (489)
Q Consensus 113 ~~~~~~------~-----~~~~~~~~~~~~~~~i~--~~~~~~V~~id~~~~----~v~~~~---g--~~i~yd~lvlAT 170 (489)
+++... . ........+++++.+++ ++++++|+.++.... +|++.+ | .++.||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 111000 0 00000112334556887 888889999986554 677654 4 578999999999
Q ss_pred C--CCCCCCCCCCCCCC-Cc-eEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhh
Q 011267 171 G--CTASRFPEKIGGYL-PG-VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL 246 (489)
Q Consensus 171 G--~~~~~~p~~~g~~~-~g-v~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~ 246 (489)
| +.|. .|.++|.+. ++ +....++.+.. ...+++|+|||+|.+|+|+|..|.+.|.+|+++++++.+++..
T Consensus 163 G~~s~p~-~p~ipG~~~~~g~~~hs~~~~~~~-----~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~ 236 (464)
T 2xve_A 163 GHFSTPY-VPEFEGFEKFGGRILHAHDFRDAL-----EFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYK 236 (464)
T ss_dssp CSSSSBC-CCCCBTTTTCCSEEEEGGGCCCGG-----GGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCC
T ss_pred CCCCCCc-cCCCCCcccCCceEEehhhhCCHh-----HcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCC
Confidence 9 6775 455566432 33 22222111111 1368999999999999999999999999999999998876642
Q ss_pred hCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhh-cCCeecCCcE
Q 011267 247 FTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFER-VGLNSSVGGI 325 (489)
Q Consensus 247 ~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~-~gl~~~~g~i 325 (489)
+ ..||+++ ..|+++.. + .|.+.+|+++++|.||+|+|++|+.+++.. +++..++++.
T Consensus 237 ~-------------~~~V~~~---~~V~~i~~---~---~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~ 294 (464)
T 2xve_A 237 W-------------PENWDER---PNLVRVDT---E---NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLW 294 (464)
T ss_dssp C-------------CTTEEEC---SCEEEECS---S---EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSC
T ss_pred C-------------CCceEEc---CCeEEEeC---C---EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCcc
Confidence 2 2477764 57888852 2 478899999999999999999999998876 6887765422
Q ss_pred EeCCC---CCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 011267 326 QVDGQ---FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 379 (489)
Q Consensus 326 ~vd~~---~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~ 379 (489)
+++.+ ++|+.|+|||+||++... .+..|..||+.+|++|.+..
T Consensus 295 v~~~~~~~~~t~~p~i~aiGd~~~~~-----------~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 295 PLNLYKGVVWEDNPKFFYIGMQDQWY-----------SFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp CSSEETTTEESSSTTEEECSCSCCSS-----------CHHHHHHHHHHHHHHHTTSS
T ss_pred cccccceEecCCCCCEEEEeCccccc-----------chHHHHHHHHHHHHHHcCCC
Confidence 24433 568999999999987631 45668899999999998643
No 85
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=5.3e-31 Score=283.25 Aligned_cols=273 Identities=18% Similarity=0.156 Sum_probs=194.1
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
...++||||||||+||++||+.|++.|+ +|+|||+++...... ... ...+.......+ .....
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~---~V~liE~~~~~GG~~-~~~--~~~p~~~~~~~~-----------~~~~~ 450 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGY---DVVLAEAGRDLGGRV-TQE--SALPGLSAWGRV-----------KEYRE 450 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSCTHH-HHH--HTSTTCGGGGHH-----------HHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCEe-eec--cCCCchhHHHHH-----------HHHHH
Confidence 3457899999999999999999999987 799999987643220 000 000100000000 01123
Q ss_pred hHHHHC-CcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCC-------CCCCCCCCCCceEeecCHHHHHH
Q 011267 128 EWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASR-------FPEKIGGYLPGVHYIRDVADADA 199 (489)
Q Consensus 128 ~~~~~~-~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~-------~p~~~g~~~~gv~~~~~~~~~~~ 199 (489)
..+.+. +++++++++++ ..++.++.||+||+|||+.+.. .|.++|.+.+.+.+. .+ .
T Consensus 451 ~~~~~~~gv~~~~~~~v~----------~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~---~~--~ 515 (690)
T 3k30_A 451 AVLAELPNVEIYRESPMT----------GDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGP---DD--L 515 (690)
T ss_dssp HHHHTCTTEEEESSCCCC----------HHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECH---HH--H
T ss_pred HHHHHcCCCEEEECCeec----------HHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcH---HH--H
Confidence 344555 88888875432 2344557899999999998531 344455444444332 22 2
Q ss_pred HHHhhcCCCcEEEEC--CCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEE
Q 011267 200 LISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277 (489)
Q Consensus 200 ~~~~~~~~~~vvViG--~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~ 277 (489)
+......+++++||| +|++|+|+|..|.+.|.+|+++++.+.+++...++.....+.+.+++.||++++ +++|++++
T Consensus 516 l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~-~~~V~~i~ 594 (690)
T 3k30_A 516 FAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVT-DHAVVAVG 594 (690)
T ss_dssp HTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEE-SEEEEEEE
T ss_pred hCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEc-CcEEEEEE
Confidence 222345678899999 999999999999999999999999998887655566778888999999999999 99999997
Q ss_pred eCCCCcEEEEE---eCCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCc
Q 011267 278 AGSDGRVAAVK---LEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDR 354 (489)
Q Consensus 278 ~~~~~~v~~v~---~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~ 354 (489)
. ++. .+. ..++++++||.||+|+|.+|++++++.++... . +|+.|+|||+|||+..+
T Consensus 595 ~--~~~--~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~~~---~-------~t~~~~VyaiGD~~~~~------ 654 (690)
T 3k30_A 595 A--GGV--TVRDTYASIERELECDAVVMVTARLPREELYLDLVARR---D-------AGEIASVRGIGDAWAPG------ 654 (690)
T ss_dssp T--TEE--EEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHHHH---H-------HTSCSEEEECGGGTSCB------
T ss_pred C--CeE--EEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhhhh---c-------ccCCCCEEEEeCCCchh------
Confidence 3 221 222 23456899999999999999998877654321 1 78999999999999732
Q ss_pred ccccccHHHHHHHHHHHHHHHhcC
Q 011267 355 TARVEHVDHARQSAQHCIKALLSA 378 (489)
Q Consensus 355 ~~~~~~~~~A~~~g~~~a~~l~~~ 378 (489)
.+..|..+|+.+|.+|.+.
T Consensus 655 -----~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 655 -----TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp -----CHHHHHHHHHHHHHHTTCC
T ss_pred -----hHHHHHHHHHHHHHHHHhh
Confidence 3456999999999999864
No 86
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=7e-30 Score=262.81 Aligned_cols=314 Identities=14% Similarity=0.096 Sum_probs=191.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCC---CcEEEEcCCCCCCCCCCCCccccCCC--C------CCCCCCCCCCc---
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMAD---GRLCIVSKEAYAPYERPALTKGYLFP--L------DKKPARLPGFH--- 115 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~---~~V~li~~~~~~~y~~~~l~~~~~~~--~------~~~~~~~~~~~--- 115 (489)
..+||||||||+||+++|..|++.|. . .+|+|||+++...|....+..+.... . ...+.....+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~-~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQ-AQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHH-HHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhccc-ccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 45699999999999999999999982 2 47999999998765532221100000 0 00000000000
Q ss_pred cccC-------CCCC----CCC----hhHHHHCCcEEEeCCcEEEEeCC---CC----EEEeCCCe----EEeeCcEEec
Q 011267 116 TCVG-------SGGE----RQT----PEWYKEKGIEMIYQDPVTSIDIE---KQ----TLITNSGK----LLKYGSLIVA 169 (489)
Q Consensus 116 ~~~~-------~~~~----~~~----~~~~~~~~i~~~~~~~V~~id~~---~~----~v~~~~g~----~i~yd~lvlA 169 (489)
...+ .... ... ..+.++.+++++.+++|+.++++ .+ +|.+.+|. ++.||+||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 0000 0000 000 11223457889999899999875 43 66666665 7999999999
Q ss_pred CCCCCCCCCC-CCCCCCC-ceEeecCHHH-HHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcchh
Q 011267 170 TGCTASRFPE-KIGGYLP-GVHYIRDVAD-ADALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQ 244 (489)
Q Consensus 170 TG~~~~~~p~-~~g~~~~-gv~~~~~~~~-~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~l~ 244 (489)
||+.|. .|. .++.... .+.....+.+ .+.+......+++|+|||+|.+|+|+|..|.+. +.+|+++++.+.+++
T Consensus 188 tG~~p~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p 266 (463)
T 3s5w_A 188 PGGTPR-IPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP 266 (463)
T ss_dssp CCCEEC-CCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB
T ss_pred CCCCCC-CcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC
Confidence 999876 343 2221111 2332222211 122211122578999999999999999999998 889999999987643
Q ss_pred h--------h-----------hCHHHHHHHHHHHHh--------------------------cCcEEEEcCceEEEEEeC
Q 011267 245 R--------L-----------FTPSLAQRYEQLYQQ--------------------------NGVKFVKVGASIKNLEAG 279 (489)
Q Consensus 245 ~--------~-----------~~~~~~~~l~~~l~~--------------------------~Gv~~~~~~~~v~~i~~~ 279 (489)
. . +++.....+.+.+.. .||++++ ++.|+++..+
T Consensus 267 ~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~-~~~v~~v~~~ 345 (463)
T 3s5w_A 267 ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRC-MTTVERATAT 345 (463)
T ss_dssp CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEET-TEEEEEEEEE
T ss_pred ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEe-CCEEEEEEec
Confidence 1 1 122222222222222 5999999 9999999864
Q ss_pred CCCcEEEEEeC---CCc--EEEcCEEEEccCCCCC--CchhhhcCCeecCCcEEeCCCCCCC-----CCCeEEecccccc
Q 011267 280 SDGRVAAVKLE---DGS--TIDADTIVIGIGAKPT--VSPFERVGLNSSVGGIQVDGQFRTR-----MPGIFAIGDVAAF 347 (489)
Q Consensus 280 ~~~~v~~v~~~---~g~--~i~aD~vi~a~G~~p~--~~~~~~~gl~~~~g~i~vd~~~~t~-----~~~Iya~GD~a~~ 347 (489)
++ . ..+.+. +|+ ++++|.||+|+|++|+ .++++.+.... |++.||+++++. .|+|||+|||...
T Consensus 346 ~~-~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~--g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~ 421 (463)
T 3s5w_A 346 AQ-G-IELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL--GDHEIGRDYRLQTDERCKVAIYAQGFSQAS 421 (463)
T ss_dssp TT-E-EEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB--C--CCCTTSBCCBCTTBCSEEEESSCCHHH
T ss_pred CC-E-EEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh--CCcccCcccccccCCCCCCeEEEcCCCccc
Confidence 33 2 345655 665 4999999999999999 67777665443 789999999974 4679999999864
Q ss_pred CCccCCcccccccHHHHHHHHHHHHHHH
Q 011267 348 PLKMYDRTARVEHVDHARQSAQHCIKAL 375 (489)
Q Consensus 348 ~~~~~~~~~~~~~~~~A~~~g~~~a~~l 375 (489)
.+.... ..-..|..++.+++..+
T Consensus 422 ~g~~~~-----~l~~~a~r~~~i~~~~~ 444 (463)
T 3s5w_A 422 HGLSDT-----LLSVLPVRAEEISGSLY 444 (463)
T ss_dssp HCTTTT-----SSTTHHHHHHHHHHHHH
T ss_pred CCcCcc-----chhHHHHHHHHHHHHHH
Confidence 332111 11123556666554443
No 87
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=2.8e-29 Score=269.23 Aligned_cols=262 Identities=18% Similarity=0.202 Sum_probs=187.2
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
...++||||||||+||++||..|++.|+ +|+|||+++..++. ..+.. .+ +... .+ ... .....
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~---~V~lie~~~~~gg~-~~~~~-~~-~~~~---~~---~~~-----~~~~~ 432 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGH---QVTLFDAHSEIGGQ-FNIAK-QI-PGKE---EF---YET-----LRYYR 432 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSCTT-HHHHT-TS-TTCT---TH---HHH-----HHHHH
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCCe-eeccc-cC-CCHH---HH---HHH-----HHHHH
Confidence 3457899999999999999999999876 79999998876543 11111 00 1000 00 000 01123
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEE-eeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcC
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLL-KYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 206 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i-~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~ 206 (489)
.++++.++++++++.|.. ..+ .||+||+|||+.|. .|.++|.+.+++++.. +.+......
T Consensus 433 ~~~~~~gv~~~~~~~v~~-------------~~~~~~d~lviAtG~~p~-~~~i~G~~~~~v~~~~-----~~l~~~~~~ 493 (671)
T 1ps9_A 433 RMIEVTGVTLKLNHTVTA-------------DQLQAFDETILASGIVPR-TPPIDGIDHPKVLSYL-----DVLRDKAPV 493 (671)
T ss_dssp HHHHHHTCEEEESCCCCS-------------SSSCCSSEEEECCCEEEC-CCCCBTTTSTTEEEHH-----HHHTSCCCC
T ss_pred HHHHHcCCEEEeCcEecH-------------HHhhcCCEEEEccCCCcC-CCCCCCCCCCcEeeHH-----HHhhCCCCC
Confidence 455678999999875531 113 89999999999887 4556675555565431 222222346
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-------------------------------------cEEEEccCCcchhhhhCH
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKL-------------------------------------DTTIIFPENHLLQRLFTP 249 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~-------------------------------------~V~lv~~~~~~l~~~~~~ 249 (489)
+++++|||+|++|+|+|..|.+.|. +|+++++.+..+...+++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~ 573 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGK 573 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCT
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhcccccc
Confidence 7899999999999999999998773 456777766666656777
Q ss_pred HHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEe
Q 011267 250 SLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQV 327 (489)
Q Consensus 250 ~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~v 327 (489)
.....+.+.+++.||++++ +++++++.. ++ + .+. .+| +++++|.||+|+|++|++++++.+.
T Consensus 574 ~~~~~~~~~l~~~GV~v~~-~~~v~~i~~--~~-v-~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l~---------- 637 (671)
T 1ps9_A 574 TTGWIHRTTLLSRGVKMIP-GVSYQKIDD--DG-L-HVV-INGETQVLAVDNVVICAGQEPNRALAQPLI---------- 637 (671)
T ss_dssp TTHHHHHHHHHHTTCEEEC-SCEEEEEET--TE-E-EEE-ETTEEEEECCSEEEECCCEEECCTTHHHHH----------
T ss_pred ccHHHHHHHHHhcCCEEEe-CcEEEEEeC--Ce-E-EEe-cCCeEEEEeCCEEEECCCccccHHHHHHHH----------
Confidence 7777888999999999999 999999972 22 2 222 567 5799999999999999998876541
Q ss_pred CCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHH
Q 011267 328 DGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 375 (489)
Q Consensus 328 d~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l 375 (489)
...++||++|||+..... .+..|..+|..+|.||
T Consensus 638 -----~~g~~v~aiGD~~~~~~~---------~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 638 -----DSGKTVHLIGGCDVAMEL---------DARRAIAQGTRLALEI 671 (671)
T ss_dssp -----TTTCCEEECGGGTCCSSC---------CHHHHHHHHHHHHHHC
T ss_pred -----hcCCCEEEECCcCccCch---------hHHHHHHHHHHHHHhC
Confidence 122689999999975421 4677999999999875
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.96 E-value=2.6e-28 Score=249.78 Aligned_cols=289 Identities=12% Similarity=0.088 Sum_probs=188.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC----CCCC-C----Ccc--------ccCC----C--CC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP----YERP-A----LTK--------GYLF----P--LD 105 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~----y~~~-~----l~~--------~~~~----~--~~ 105 (489)
++.+||+|||||++|+++|..|++.|. ..+|+|+|+.+... |... . ++. .+.. . ..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~-~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKA-FDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTC-CSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCC-CCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 356899999999999999999999986 45799999986432 2110 0 000 0000 0 00
Q ss_pred CCCC-----------CCCCCccccCCCCC-------CCChhHHHHCCcEEEeCCcEEEEeCCCC--EEEeCC---Ce---
Q 011267 106 KKPA-----------RLPGFHTCVGSGGE-------RQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNS---GK--- 159 (489)
Q Consensus 106 ~~~~-----------~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~---g~--- 159 (489)
.... .+.+++........ ....++.++.+..++++++|+.++.... +|++.+ |.
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 0000 00000000000000 0011223344667888899999987554 566654 65
Q ss_pred EEeeCcEEecCCC--CCCCCCCCCCCC-----CCc-eEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCC
Q 011267 160 LLKYGSLIVATGC--TASRFPEKIGGY-----LPG-VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKL 231 (489)
Q Consensus 160 ~i~yd~lvlATG~--~~~~~p~~~g~~-----~~g-v~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~ 231 (489)
++.||+||+|||. .|. .|.++|.+ .++ +.+.+++.+.. ...+++|+|||+|++|+|+|..|.+.+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~-~p~i~G~~~~~~~~~g~v~~~~~~~~~~-----~~~~k~VvVvG~G~sg~e~A~~l~~~~~ 236 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPY-IPNIKGLDEYAKAVPGSVLHSSLFREPE-----LFVGESVLVVGGASSANDLVRHLTPVAK 236 (447)
T ss_dssp EEEESEEEECCCSSSSBC-BCCCBTHHHHHHHSTTSEEEGGGCCCGG-----GGTTCCEEEECSSHHHHHHHHHHTTTSC
T ss_pred EEEeCEEEECCCCCCCCC-CCCCCChhhhhccCCccEEEecccCChh-----hcCCCEEEEEccCcCHHHHHHHHHHHhC
Confidence 7999999999998 554 44444421 122 33332222211 1258999999999999999999999999
Q ss_pred c-EEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcE-EEcCEEEEccCCCCC
Q 011267 232 D-TTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGST-IDADTIVIGIGAKPT 309 (489)
Q Consensus 232 ~-V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~-i~aD~vi~a~G~~p~ 309 (489)
+ |+++++.+.+ +++.||. . +..|+++..+ ++ .|++.||++ +++|.||+|+|++|+
T Consensus 237 ~~V~l~~r~~~~----------------l~~~~i~--~-~~~v~~~~~~-~~---~v~~~dG~~~~~~D~vi~atG~~~~ 293 (447)
T 2gv8_A 237 HPIYQSLLGGGD----------------IQNESLQ--Q-VPEITKFDPT-TR---EIYLKGGKVLSNIDRVIYCTGYLYS 293 (447)
T ss_dssp SSEEEECTTCCS----------------CBCSSEE--E-ECCEEEEETT-TT---EEEETTTEEECCCSEEEECCCBCCC
T ss_pred CcEEEEeCCCCc----------------CCCCCeE--E-ecCeEEEecC-CC---EEEECCCCEeccCCEEEECCCCCcC
Confidence 9 9999998755 3456776 4 5788898632 22 578899976 799999999999999
Q ss_pred Cch-----hhhc--CCeecCCcEEeCCCCC---CCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhcCC
Q 011267 310 VSP-----FERV--GLNSSVGGIQVDGQFR---TRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLSAQ 379 (489)
Q Consensus 310 ~~~-----~~~~--gl~~~~g~i~vd~~~~---t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~~~ 379 (489)
+++ ++.+ ++..+ +.+.++.+.+ +++|+||++||+.... .+..|..||+.+|++|.+..
T Consensus 294 ~~~l~~~~l~~~~~~i~~~-~~~~~~~~~~v~~~~~p~l~~~G~~~~~~-----------~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 294 VPFPSLAKLKSPETKLIDD-GSHVHNVYQHIFYIPDPTLAFVGLALHVV-----------PFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp CCCHHHHSCCSTTTCCCSS-SSSCCSEETTTEETTCTTEEESSCCBSSC-----------HHHHHHHHHHHHHHHHTTSS
T ss_pred CCCCcccccccccCceecC-CCcccccccccccCCCCcEEEEecccccc-----------CchHHHHHHHHHHHHHcCCC
Confidence 999 7654 33332 3445555555 6899999999997531 45668899999999998643
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.94 E-value=2.1e-26 Score=239.78 Aligned_cols=299 Identities=16% Similarity=0.226 Sum_probs=186.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHH-HcCCCCCcEEEEcCCCCCCC-----CCCCC----c-cccCCCCCCC---CCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFV-EHGMADGRLCIVSKEAYAPY-----ERPAL----T-KGYLFPLDKK---PARLPGF 114 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~-~~g~~~~~V~li~~~~~~~y-----~~~~l----~-~~~~~~~~~~---~~~~~~~ 114 (489)
++++||||||||+||+++|..|+ +.|. +|+|||+++.... ..|.. . ..+.+..... ...+...
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~---~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~ 82 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGL---TTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTT 82 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCC---CEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCC---CEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCccc
Confidence 34579999999999999999999 8775 7999999765431 11111 0 0011100000 0000000
Q ss_pred ccccCCCCCCCChhHHHHCCc--EEEeCCcEEEEeCCCC----EEEeCCCeEEeeCcEEecCC--CCCCCCCCCCCCC-C
Q 011267 115 HTCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-L 185 (489)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~i--~~~~~~~V~~id~~~~----~v~~~~g~~i~yd~lvlATG--~~~~~~p~~~g~~-~ 185 (489)
...............+++++ .++++++|++++.+.. +|.+.+|+++.||+||+||| +.|. .|.++|.+ .
T Consensus 83 -~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f 160 (540)
T 3gwf_A 83 -YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN-FPNLPGLDTF 160 (540)
T ss_dssp -EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC-CCCCTTGGGC
T ss_pred -CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC-CCCCCCcccc
Confidence 00000001112334566787 7888999999987655 78889999999999999999 4665 45555532 2
Q ss_pred Cce--EeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc-hhh---hhCHHHHHHHH---
Q 011267 186 PGV--HYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-LQR---LFTPSLAQRYE--- 256 (489)
Q Consensus 186 ~gv--~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~-l~~---~~~~~~~~~l~--- 256 (489)
.+. ++.+... .....+++|+|||+|.+|+|+|..|++.+.+|+++++.+.+ ++. .+.+...+.++
T Consensus 161 ~g~~~~~~~~~~------~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~ 234 (540)
T 3gwf_A 161 EGETIHTAAWPE------GKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADY 234 (540)
T ss_dssp CSEEEEGGGCCS------SCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTH
T ss_pred CCCEEEeecCCC------ccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhcc
Confidence 232 2111111 12246799999999999999999999999999999999873 221 01111111111
Q ss_pred ----------------------------------------------------------------------HH--------
Q 011267 257 ----------------------------------------------------------------------QL-------- 258 (489)
Q Consensus 257 ----------------------------------------------------------------------~~-------- 258 (489)
+.
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp 314 (540)
T 3gwf_A 235 DRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDP 314 (540)
T ss_dssp HHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSH
T ss_pred HHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCH
Confidence 01
Q ss_pred -------------------------HHhcCcEEEEc-CceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCch
Q 011267 259 -------------------------YQQNGVKFVKV-GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP 312 (489)
Q Consensus 259 -------------------------l~~~Gv~~~~~-~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~ 312 (489)
+.+.+|+++.. +..|++|..+ +|+++||+++++|.||+|||+.+++.+
T Consensus 315 ~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~------gv~~~dG~~~~~DvIV~ATGf~~~~~~ 388 (540)
T 3gwf_A 315 ETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK------GVVTEDGVLHELDVLVFATGFDAVDGN 388 (540)
T ss_dssp HHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS------EEEETTCCEEECSEEEECCCBSCSSHH
T ss_pred HHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC------eEEcCCCCEEECCEEEECCccCccccC
Confidence 11447888710 3688888643 688999999999999999999998767
Q ss_pred hhhcCCeecCCcEEeCCC----------CC-CCCCCeEEe-ccccccCCccCCcccccccHHHHHHHHHHHHHHH
Q 011267 313 FERVGLNSSVGGIQVDGQ----------FR-TRMPGIFAI-GDVAAFPLKMYDRTARVEHVDHARQSAQHCIKAL 375 (489)
Q Consensus 313 ~~~~gl~~~~g~i~vd~~----------~~-t~~~~Iya~-GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l 375 (489)
+...++... +|+.+++. +. .+.||+|.+ |..+. .. .....+..|++.+++.|
T Consensus 389 ~~~~~i~g~-~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~-~~---------s~~~~~e~q~~~i~~~i 452 (540)
T 3gwf_A 389 YRRIEIRGR-DGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP-FT---------NLPPSIETQVEWISDTI 452 (540)
T ss_dssp HHTSEEECG-GGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB-CS---------CHHHHHHHHHHHHHHHH
T ss_pred cCcceEECC-CCcCHHHhhccChhhccccccCCCCceEEEecCCCC-Cc---------cHHHHHHHHHHHHHHHH
Confidence 766555432 45555532 22 278999999 87654 11 11233555666666655
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.92 E-value=2.3e-24 Score=224.91 Aligned_cols=275 Identities=17% Similarity=0.247 Sum_probs=172.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC----CC-CC----Ccc-ccCCCCCCC---CCCCCCCc
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY----ER-PA----LTK-GYLFPLDKK---PARLPGFH 115 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y----~~-~~----l~~-~~~~~~~~~---~~~~~~~~ 115 (489)
+.++||||||||+||+++|.+|++.|. +|+|||+++.... ++ |. ... .+.+..... ...+...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~- 94 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGL---TVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEK- 94 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSS-
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccC-
Confidence 346799999999999999999999876 7999999765431 10 11 110 000000000 0000000
Q ss_pred cccCCCCCCCChhHHHHCCc--EEEeCCcEEEEeCCCC----EEEeCCCeEEeeCcEEecCC--CCCCCCCCCCCCC-CC
Q 011267 116 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LP 186 (489)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~i--~~~~~~~V~~id~~~~----~v~~~~g~~i~yd~lvlATG--~~~~~~p~~~g~~-~~ 186 (489)
..............+++.++ .++++++|++++.+.. +|.+.+|+++.||+||+||| +.|. .|.++|.+ ..
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 173 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN-TPAFDGLDRFT 173 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC-CCCCTTGGGCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCC
Confidence 00000000112234556777 7888999999987655 88899999999999999999 6665 45555533 22
Q ss_pred ceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc-hhhhhCHHHH-------------
Q 011267 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-LQRLFTPSLA------------- 252 (489)
Q Consensus 187 gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~-l~~~~~~~~~------------- 252 (489)
+..........+ .....+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+ ++. .++.+.
T Consensus 174 g~~~~~~~~~~~---~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~-~~~~~~~~~~~~l~~~~~~ 249 (549)
T 4ap3_A 174 GDIVHTARWPHD---GVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPA-GNVPLDDATRAEQKANYAE 249 (549)
T ss_dssp SEEEEGGGCCTT---CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEEC-C----CHHHHHHHHHTHHH
T ss_pred CceEEecccccc---ccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccC-cCCCCCHHHHHHHHhccHH
Confidence 321111000000 01126899999999999999999999999999999999864 221 111111
Q ss_pred --------------------------------------------------------------HHHHHH------------
Q 011267 253 --------------------------------------------------------------QRYEQL------------ 258 (489)
Q Consensus 253 --------------------------------------------------------------~~l~~~------------ 258 (489)
+.+.+.
T Consensus 250 ~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~ 329 (549)
T 4ap3_A 250 RRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAE 329 (549)
T ss_dssp HHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHH
T ss_pred HHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 001111
Q ss_pred -----------------------HHhcCcEEE--EcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchh
Q 011267 259 -----------------------YQQNGVKFV--KVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 313 (489)
Q Consensus 259 -----------------------l~~~Gv~~~--~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~ 313 (489)
+.+.+|+++ . ...|++|..+ +|++++| ++++|.||+|||+.+++.++
T Consensus 330 ~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~-~~~I~~it~~------gv~~~dG-~~~~D~iI~ATGf~~~~~~~ 401 (549)
T 4ap3_A 330 LLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLR-STPIVGMDET------GIVTTGA-HYDLDMIVLATGFDAMTGSL 401 (549)
T ss_dssp HHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETT-TSCEEEEETT------EEEESSC-EEECSEEEECCCEEESSTTG
T ss_pred hCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCC-CCCceEEeCC------cEEeCCC-ceecCEEEECCccccccccc
Confidence 223378887 2 3788888743 5889999 99999999999999987666
Q ss_pred hhcCCeecCCcEEeCCCCC-----------CCCCCeEEe
Q 011267 314 ERVGLNSSVGGIQVDGQFR-----------TRMPGIFAI 341 (489)
Q Consensus 314 ~~~gl~~~~g~i~vd~~~~-----------t~~~~Iya~ 341 (489)
....+.. ++|+.+++.++ .+.||+|.+
T Consensus 402 ~~~~i~g-~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~ 439 (549)
T 4ap3_A 402 DKLEIVG-RGGRTLKETWAAGPRTYLGLGIDGFPNFFNL 439 (549)
T ss_dssp GGSEEEC-GGGCBHHHHTTTSCCCBTTTBCTTCTTEEET
T ss_pred CceeEEC-CCCcCHHHhhccchhhccccccCCCCcEEEE
Confidence 6655542 35666664322 267898886
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.92 E-value=5.2e-25 Score=229.55 Aligned_cols=189 Identities=17% Similarity=0.174 Sum_probs=116.0
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC-------C--CCCCCcc---ccCCCCCC-CCCCCCCCc
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-------Y--ERPALTK---GYLFPLDK-KPARLPGFH 115 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~-------y--~~~~l~~---~~~~~~~~-~~~~~~~~~ 115 (489)
+..+||||||||+||+++|.+|++.|. +|+|||+++... | .+..... .+.+.... ....+....
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~---~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~ 83 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGM---KVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENF 83 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccC
Confidence 456899999999999999999999876 799999986542 1 1111100 00000000 000000000
Q ss_pred cccCCCCCCCChhHHHHCCc--EEEeCCcEEEEeCCCC----EEEeCCCeEEeeCcEEecCC--CCCCCCCCCCCCC-CC
Q 011267 116 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LP 186 (489)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~i--~~~~~~~V~~id~~~~----~v~~~~g~~i~yd~lvlATG--~~~~~~p~~~g~~-~~ 186 (489)
..............+++++ .++++++|+.++.+.. .|.+.+|+++.||+||+||| +.|. .|.++|.+ ..
T Consensus 84 -~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 161 (545)
T 3uox_A 84 -ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR-MPDIKGIDSFK 161 (545)
T ss_dssp -CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC----CCCTTGGGCC
T ss_pred -CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc-CCCCCCccccC
Confidence 0000000112233455666 6888899999987654 88899999999999999999 6665 45555532 22
Q ss_pred c--eEeecCHHHHHHHH-HhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 187 G--VHYIRDVADADALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 187 g--v~~~~~~~~~~~~~-~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
+ ++..+...+..... .....+++|+|||+|.+|+|+|..|++.+.+|+++.+.+++
T Consensus 162 g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 162 GESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp SEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 2 22211111100000 01235789999999999999999999999999999998863
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.91 E-value=1.2e-23 Score=219.93 Aligned_cols=301 Identities=16% Similarity=0.222 Sum_probs=182.9
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC----C-CCCCc---cccCCCCCCCC-----CCCCCCc
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY----E-RPALT---KGYLFPLDKKP-----ARLPGFH 115 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y----~-~~~l~---~~~~~~~~~~~-----~~~~~~~ 115 (489)
+..+||+|||||++|+++|.+|++.|. +|+|+|+++.... . .|... ....+...-.+ ..++..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~- 89 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGR---SVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTER- 89 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBS-
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccc-
Confidence 346799999999999999999999986 7999999875421 0 01110 00000000000 000000
Q ss_pred cccCCCCCCCChhHHHHCC--cEEEeCCcEEEEeCCC----CEEEeCCCeEEeeCcEEecCCC--CCCCCCCCCCCC-CC
Q 011267 116 TCVGSGGERQTPEWYKEKG--IEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LP 186 (489)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~--i~~~~~~~V~~id~~~----~~v~~~~g~~i~yd~lvlATG~--~~~~~p~~~g~~-~~ 186 (489)
...............++.+ ..++++++|++++.+. .+|++.+|+++.||+||+|||. .|. .|.++|.+ ..
T Consensus 90 ~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~-~p~i~G~~~f~ 168 (542)
T 1w4x_A 90 YASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQ-LPNFPGLKDFA 168 (542)
T ss_dssp SCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCC-CCCCTTGGGCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCC
Confidence 0000000001112234444 5688889999987643 3678888988999999999995 454 45555532 33
Q ss_pred c--eEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch-hhh---hCHHH---------
Q 011267 187 G--VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-QRL---FTPSL--------- 251 (489)
Q Consensus 187 g--v~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l-~~~---~~~~~--------- 251 (489)
+ +++.+...+. ....+++|+|||+|.+|+|+|..+++.+.+|+++.|.+.+. ++. +.+..
T Consensus 169 G~~~hs~~~~~~~-----~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p 243 (542)
T 1w4x_A 169 GNLYHTGNWPHEP-----VDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYA 243 (542)
T ss_dssp SEEEEGGGCCSSC-----CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHH
T ss_pred CceEECCCCCCch-----hccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCH
Confidence 4 2221111010 11358999999999999999999999999999999887552 210 01100
Q ss_pred --------------------------------------------------------------HHHHHHH-----------
Q 011267 252 --------------------------------------------------------------AQRYEQL----------- 258 (489)
Q Consensus 252 --------------------------------------------------------------~~~l~~~----------- 258 (489)
.+.+.+.
T Consensus 244 ~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (542)
T 1w4x_A 244 EFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVA 323 (542)
T ss_dssp HHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHH
T ss_pred HHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0111111
Q ss_pred ------------------------HHhcCcEEE--EcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCch
Q 011267 259 ------------------------YQQNGVKFV--KVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSP 312 (489)
Q Consensus 259 ------------------------l~~~Gv~~~--~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~ 312 (489)
+.+.+|+++ . +..|+++..+ +|+++| +++++|.||+|||+++++.+
T Consensus 324 ~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~-~~~i~~i~~~------gv~~~d-~~~~~D~ii~atG~~~~~~~ 395 (542)
T 1w4x_A 324 ERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTL-SAPIETITPR------GVRTSE-REYELDSLVLATGFDALTGA 395 (542)
T ss_dssp HHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETT-TSCEEEECSS------EEEESS-CEEECSEEEECCCCCCTTHH
T ss_pred HhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecC-CCCceEEcCC------eEEeCC-eEEecCEEEEcCCccccccC
Confidence 112357776 3 4678888632 588899 89999999999999998888
Q ss_pred hhhcCCeecCCcEEeCCCCC----------C-CCCCeEEe-ccccccCCccCCcccccccH-HHHHHHHHHHHHHHhc
Q 011267 313 FERVGLNSSVGGIQVDGQFR----------T-RMPGIFAI-GDVAAFPLKMYDRTARVEHV-DHARQSAQHCIKALLS 377 (489)
Q Consensus 313 ~~~~gl~~~~g~i~vd~~~~----------t-~~~~Iya~-GD~a~~~~~~~~~~~~~~~~-~~A~~~g~~~a~~l~~ 377 (489)
+...++... +|+.+++.++ + +.||+|++ |+.+.. ...+| ..+..|++.++++|..
T Consensus 396 ~~~~~i~g~-~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~---------~~~~~~~~~e~q~~~ia~~i~~ 463 (542)
T 1w4x_A 396 LFKIDIRGV-GNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPS---------ALSNMLVSIEQHVEWVTDHIAY 463 (542)
T ss_dssp HHTSEEECG-GGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSG---------GGSCHHHHHHHHHHHHHHHHHH
T ss_pred cCceeeECC-CCCCHHHhhcCchheecccccCCCCceEEEcCCCCCc---------ccccHHHHHHHHHHHHHHHHHH
Confidence 777655443 4666665332 1 45666665 665421 12344 5677889988888753
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.88 E-value=1.1e-21 Score=174.94 Aligned_cols=153 Identities=22% Similarity=0.229 Sum_probs=130.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh--------hh-----CHHHHHHHHHHHHhcCcEEEEcCceEEE
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR--------LF-----TPSLAQRYEQLYQQNGVKFVKVGASIKN 275 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~--------~~-----~~~~~~~l~~~l~~~Gv~~~~~~~~v~~ 275 (489)
+++|||+|++|+++|..|.+.|.+|+++++.+.++.+ .+ ++++.+.+.+.+++.|+++++ + +|++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~-~-~v~~ 80 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRP-G-VVKG 80 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEE-C-CCCE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEe-C-EEEE
Confidence 6899999999999999999999999999998766532 12 478889999999999999999 8 9999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcc
Q 011267 276 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRT 355 (489)
Q Consensus 276 i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~ 355 (489)
++.++++ ..+.+++| ++++|.||+|+|.+|+ +++.+|++.++|.+.||+++||+.|+|||+|||+..+.+
T Consensus 81 i~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~~----- 150 (180)
T 2ywl_A 81 VRDMGGV--FEVETEEG-VEKAERLLLCTHKDPT--LPSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVPG----- 150 (180)
T ss_dssp EEECSSS--EEEECSSC-EEEEEEEEECCTTCCH--HHHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCSC-----
T ss_pred EEEcCCE--EEEEECCC-EEEECEEEECCCCCCC--ccccCCCCccCceEEeCCCCCcCCCCEEEeecccCcchh-----
Confidence 9865433 35778888 8999999999999984 567888887756688999999999999999999986531
Q ss_pred cccccHHHHHHHHHHHHHHHhc
Q 011267 356 ARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 356 ~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
.+..|..+|+.+|.||.+
T Consensus 151 ----~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 151 ----HAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp ----CHHHHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHhHHHHHHHHHH
Confidence 556788999999999975
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.80 E-value=7.5e-18 Score=174.16 Aligned_cols=293 Identities=16% Similarity=0.215 Sum_probs=161.0
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCC-----------CCcEEEEcCCCCCCCCCCCCccccCC----------CCC-C
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMA-----------DGRLCIVSKEAYAPYERPALTKGYLF----------PLD-K 106 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~-----------~~~V~li~~~~~~~y~~~~l~~~~~~----------~~~-~ 106 (489)
...+||||||+||+||++|..|++.+.+ ....+.+|+.+.+.|+..++..+.-. ..+ .
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 3468999999999999999999886531 23567888887766543222111000 000 0
Q ss_pred CCCCCC----------CCccccC----CCCCCCChhHH-HHCCcEEEeCCcEEEEeCCC----------CEEEeCCC---
Q 011267 107 KPARLP----------GFHTCVG----SGGERQTPEWY-KEKGIEMIYQDPVTSIDIEK----------QTLITNSG--- 158 (489)
Q Consensus 107 ~~~~~~----------~~~~~~~----~~~~~~~~~~~-~~~~i~~~~~~~V~~id~~~----------~~v~~~~g--- 158 (489)
.+..+. .|..... ......+..|+ ++.+..++.+++|+++.+.. .+|++.++
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g 196 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETG 196 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTC
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCc
Confidence 000000 0000000 00000111222 34566688889999986422 35665443
Q ss_pred --eEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHH-HHHHHhhcCCCcEEEECCCHHHHHHHHHHHhC--CCcE
Q 011267 159 --KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADA-DALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDT 233 (489)
Q Consensus 159 --~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~-~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~--g~~V 233 (489)
.++.+++||+|||..|. +|...+. .+.++....+.+. +.+......+|+|+|||+|.+|+|++..|.+. +.+|
T Consensus 197 ~~~~~~ar~vVlatG~~P~-iP~~~~~-~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v 274 (501)
T 4b63_A 197 EISARRTRKVVIAIGGTAK-MPSGLPQ-DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRT 274 (501)
T ss_dssp CEEEEEEEEEEECCCCEEC-CCTTSCC-CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEE
T ss_pred eEEEEEeCEEEECcCCCCC-CCCCCCC-CcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceE
Confidence 36889999999998876 4543332 2234333222221 22222234689999999999999999999764 6789
Q ss_pred EEEccCCcchh--------hhhCHHHHH-------------------------------HHHHHH-Hh---------cCc
Q 011267 234 TIIFPENHLLQ--------RLFTPSLAQ-------------------------------RYEQLY-QQ---------NGV 264 (489)
Q Consensus 234 ~lv~~~~~~l~--------~~~~~~~~~-------------------------------~l~~~l-~~---------~Gv 264 (489)
+++.|++.+.+ ..+.+...+ .+.+.+ ++ ...
T Consensus 275 ~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~ 354 (501)
T 4b63_A 275 TLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQH 354 (501)
T ss_dssp EEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSS
T ss_pred EEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccce
Confidence 99998864422 112221111 111111 10 112
Q ss_pred EEEEcCceEEEEEeCCC-CcE-----------EEEEeCCCcEEEcCEEEEccCCCCCCch--hhhc-CCeec-CCcEEeC
Q 011267 265 KFVKVGASIKNLEAGSD-GRV-----------AAVKLEDGSTIDADTIVIGIGAKPTVSP--FERV-GLNSS-VGGIQVD 328 (489)
Q Consensus 265 ~~~~~~~~v~~i~~~~~-~~v-----------~~v~~~~g~~i~aD~vi~a~G~~p~~~~--~~~~-gl~~~-~g~i~vd 328 (489)
.+.. +..+..+..... +++ .++.+.+|+++++|.||+|||++|+... +..+ .+..+ +|...|+
T Consensus 355 ~l~~-~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~ 433 (501)
T 4b63_A 355 RILP-ERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPH 433 (501)
T ss_dssp EEEC-SEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBC
T ss_pred eecC-CcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeC
Confidence 4555 666666653322 121 1345678899999999999999988532 2221 12222 4567777
Q ss_pred CCCCC--------CCCCeEEeccc
Q 011267 329 GQFRT--------RMPGIFAIGDV 344 (489)
Q Consensus 329 ~~~~t--------~~~~Iya~GD~ 344 (489)
.+++. ..++||+-|-+
T Consensus 434 rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 434 RDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp TTSBBCCCTTTBCTTCEEEECSCC
T ss_pred CCcEEeecCCccCCCceEEecCCC
Confidence 76543 24679999843
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.69 E-value=1.8e-18 Score=177.52 Aligned_cols=222 Identities=16% Similarity=0.123 Sum_probs=130.0
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEE---EeC-CCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhc
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTL---ITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 205 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v---~~~-~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~ 205 (489)
+++.+++++.+++| ++..+...+ .+. ++.++.+|.+|+|||+.+..++...+ .++ .+...+.-+.+....+.
T Consensus 129 ~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~--~~~-~tGdgi~~a~~aGa~~~ 204 (472)
T 2e5v_A 129 AREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSST--QST-NIGDGMAIAFKAGTILA 204 (472)
T ss_dssp HHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSS--CTT-CSCHHHHHHHHTTCCEE
T ss_pred HHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccC--CCC-CchHHHHHHHHcCCCEe
Confidence 35679999999889 887655543 332 33357899999999998764332111 011 11100001111000011
Q ss_pred C------CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHH--------HHHHHHHHHHhcCcEEEEcCc
Q 011267 206 K------AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPS--------LAQRYEQLYQQNGVKFVKVGA 271 (489)
Q Consensus 206 ~------~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~--------~~~~l~~~l~~~Gv~~~~~~~ 271 (489)
. ....+++|+| +++++..++..|..+ +..+.++++++ +++. .+..+.+.+++.|. +++ +.
T Consensus 205 d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~-~~~~~el~~rd~v~~~i~~~~~~~~~-v~l-d~ 278 (472)
T 2e5v_A 205 DMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN-YDKRGELAPRDILSRAIYIEMLKGHK-VFI-DL 278 (472)
T ss_dssp CTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG-TCTTGGGSCHHHHHHHHHHHHHHTCC-EEE-EC
T ss_pred CCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc-CCcccCcCchhHHHHHHHHHHHhCCc-EEE-ec
Confidence 1 1133455766 888888888888877 78888898875 3433 25566666666664 444 32
Q ss_pred eEEEEEeCCCCcEEEEEeCCCcEEE-cCEEEEccCCCCCCchhhhcCCee-cCCcEEeCCCCCCCCCCeEEeccccccCC
Q 011267 272 SIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGIGAKPTVSPFERVGLNS-SVGGIQVDGQFRTRMPGIFAIGDVAAFPL 349 (489)
Q Consensus 272 ~v~~i~~~~~~~v~~v~~~~g~~i~-aD~vi~a~G~~p~~~~~~~~gl~~-~~g~i~vd~~~~t~~~~Iya~GD~a~~~~ 349 (489)
.. + + . +. +.++ .+.++++.|..|+ ++++..+... ..|||.||+++||++|+|||+|||+....
T Consensus 279 ~~--~---~-~------~~--~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~~~~ 343 (472)
T 2e5v_A 279 SK--I---E-D------FE--RKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGL 343 (472)
T ss_dssp TT--C---T-T------HH--HHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEECSS
T ss_pred cc--h---H-H------HH--HHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhccccc
Confidence 10 0 0 0 00 1233 3667888999998 6554332222 35899999999999999999999997321
Q ss_pred ccCCcccccccHHHHHHHHHHHHHHHhc
Q 011267 350 KMYDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 350 ~~~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
....+.. ..+..++...|+.++.++.+
T Consensus 344 hg~~rl~-~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 344 HGANRLA-SNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp STTSCCT-THHHHHHHHHHHHGGGTTTS
T ss_pred CCCCCCC-cccHHHHHHHHHHHHHHHHh
Confidence 1111111 22345667778877777653
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.61 E-value=2e-14 Score=133.18 Aligned_cols=155 Identities=18% Similarity=0.239 Sum_probs=113.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC-----------------cchhhhhC-------HHHHHHHHHHHHhc-
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN-----------------HLLQRLFT-------PSLAQRYEQLYQQN- 262 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~-----------------~~l~~~~~-------~~~~~~l~~~l~~~- 262 (489)
.+|+|||+|+.|+++|..|++.|.+|+++++.. .++.. ++ ..+.+.+.+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~-~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLER-AYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHH-HCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhh-hccCCCCCHHHHHHHHHHHHHcCC
Confidence 479999999999999999999999999999872 22221 22 36677888889887
Q ss_pred CcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCC--------------------ch---hhhcCCe
Q 011267 263 GVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV--------------------SP---FERVGLN 319 (489)
Q Consensus 263 Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~--------------------~~---~~~~gl~ 319 (489)
|++++. ++|+++..+ ++++..|.+.+|+++.||.||+|+|..++. ++ +.+.+++
T Consensus 83 gv~i~~--~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~ 159 (232)
T 2cul_A 83 PLHLFQ--ATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFR 159 (232)
T ss_dssp TEEEEE--CCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCC
T ss_pred CcEEEE--eEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCe
Confidence 999886 589999754 456667888899889999999999995442 22 3345554
Q ss_pred ecCCc-EE---------------eCC------C-CCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 011267 320 SSVGG-IQ---------------VDG------Q-FRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 376 (489)
Q Consensus 320 ~~~g~-i~---------------vd~------~-~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~ 376 (489)
..++. +. ... . .+|++|+|||+|||+ ... .+..|..+|+.+|.+|+
T Consensus 160 ~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g----------~~~~~~~~g~~~a~~i~ 228 (232)
T 2cul_A 160 FVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG----------DYARMSEEGKRLAEHLL 228 (232)
T ss_dssp EEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC----------CHHHHHHHHHHHHHHHH
T ss_pred EEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc----------cHHHHHHHHHHHHHHHH
Confidence 43211 00 110 1 126899999999999 432 45568899999999987
Q ss_pred c
Q 011267 377 S 377 (489)
Q Consensus 377 ~ 377 (489)
.
T Consensus 229 ~ 229 (232)
T 2cul_A 229 H 229 (232)
T ss_dssp H
T ss_pred h
Confidence 4
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.3e-18 Score=170.10 Aligned_cols=297 Identities=13% Similarity=0.045 Sum_probs=158.3
Q ss_pred cccceeeeeecceecCCCCCceeeeccccccccccccccccc--cCCCCCCcEEEEcCchHHHHHHHHHHHc--CCCCCc
Q 011267 4 VSNSLSFKHGLSLWCPQSPSLHRIRHSSAKNFQRRGFVVAYS--SFANENREFVIVGGGNAAGYAARTFVEH--GMADGR 79 (489)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~ 79 (489)
..||+...+.+.|...++.++.. .+++.....|....... ......+||+||||||||++||++|++. |+ +
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~---~ 92 (326)
T 3fpz_A 18 NSTPVTHCLSDIVKKEDWSDFKF--APIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDL---K 92 (326)
T ss_dssp GGSCCCCTTTTTCCSTTCTTCCC--CCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTS---C
T ss_pred hcCCchhhhhhhccccccccccc--CCccHHHHHHHHHHHHHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCC---e
Confidence 45788877777777665544432 12222222222222211 1123568999999999999999999764 55 7
Q ss_pred EEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCe
Q 011267 80 LCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK 159 (489)
Q Consensus 80 V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~ 159 (489)
|+|+|+++.+.... ...++..+.. . ........+++.++++..+.. .
T Consensus 93 V~viEk~~~~GG~~--~~~~~~~~~~-----~----------l~~~~~~~~~e~Gv~~~~~~~----------------~ 139 (326)
T 3fpz_A 93 VCIIESSVAPGGGS--WLGGQLFSAM-----V----------MRKPAHLFLQELEIPYEDEGD----------------Y 139 (326)
T ss_dssp EEEECSSSSCCTTT--TCCSTTCCCE-----E----------EETTTHHHHHHTTCCCEECSS----------------E
T ss_pred EEEEECCCCCCceE--EeCCccCCHH-----H----------HHHHHHHHHHHcCCEEEECCc----------------c
Confidence 99999987653321 0111111100 0 012345567778887665422 1
Q ss_pred EEeeCcEEecCCCCCCCCCCCCCCCC-Cc--eEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEE
Q 011267 160 LLKYGSLIVATGCTASRFPEKIGGYL-PG--VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTII 236 (489)
Q Consensus 160 ~i~yd~lvlATG~~~~~~p~~~g~~~-~g--v~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv 236 (489)
....+..+++++..+..+ ..+|... .+ +..+. . .......+++++++|+|.++++.|..+...+.+++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~---~---~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~ 212 (326)
T 3fpz_A 140 VVVKHAALFISTVLSKVL-QLPNVKLFNATCVEDLV---T---RPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIE 212 (326)
T ss_dssp EEESCHHHHHHHHHHHHH-TSTTEEEETTEEEEEEE---E---ESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEE
T ss_pred eecceeEEEEcchhhhcc-ccccceeecccccceee---c---cCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEE
Confidence 233445555665544322 2222111 11 11110 0 0111345789999999999999999999999999998
Q ss_pred ccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhc
Q 011267 237 FPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV 316 (489)
Q Consensus 237 ~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~ 316 (489)
.+........ . +.. .. ..+.... ..++... .......+.+|.++.+.|.+|...
T Consensus 213 ~~~~~~~~~~-~----------~~~-~~------~~~~~~~-g~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~----- 266 (326)
T 3fpz_A 213 LAGYKNDGTR-D----------LSQ-KH------GVILSTT-GHDGPFG--AFCAKRIVDIDQNQKLGGMKGLDM----- 266 (326)
T ss_dssp ESCBCTTSSB-C----------TTS-CC------CEEEECC-CSCSSSC--SHHHHHHHHHCTTCCCCCCCCBCH-----
T ss_pred eecccccccc-c----------cee-ec------ceEEEEe-cceeeEe--ecceeEEEecCceeeecceecccc-----
Confidence 7765432210 0 000 00 1111111 1111100 000112355666777777766421
Q ss_pred CCeecCCcEEeCCCCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHh
Q 011267 317 GLNSSVGGIQVDGQFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALL 376 (489)
Q Consensus 317 gl~~~~g~i~vd~~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~ 376 (489)
....+.+.+|..++|++|+|||+||++....... ++.+ ....++..|+.||+.++
T Consensus 267 --~~~e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~-rmGp--~~g~mi~SG~~AAe~I~ 321 (326)
T 3fpz_A 267 --NHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN-RMGP--TFGAMALSGVHAAEQIL 321 (326)
T ss_dssp --HHHHHHHHHHCEECTTSBTEEECTHHHHHHHTCC-BCCS--CCHHHHHHHHHHHHHHH
T ss_pred --cccCCeEEECCCeEECCCCEEEEchHhccccCCC-cCch--HHHHHHHHHHHHHHHHH
Confidence 1223467788899999999999999986322111 1111 12234556777777665
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.40 E-value=1.4e-14 Score=145.26 Aligned_cols=121 Identities=19% Similarity=0.198 Sum_probs=72.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-------CCCCCcc------ccCCCCCCCCCC------
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK------GYLFPLDKKPAR------ 110 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y-------~~~~l~~------~~~~~~~~~~~~------ 110 (489)
+++||+|||||++|++||..|++.|. +|+|+|+.+.... .++.+.. .++.. ......
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~---~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~-~~~~~~~~l~~~ 78 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGK---SVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQ-NPHFVKSALARY 78 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECS-CTTSTHHHHHHS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCC---CEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccC-CHHHHHHHHHhC
Confidence 45899999999999999999999986 7999999875311 0111110 01100 000000
Q ss_pred ----------CCCCcccc-----------CCCCCCCChhHHHHCCcEEEeCCcEEEEeCC----C--CEEEeCCCeEEee
Q 011267 111 ----------LPGFHTCV-----------GSGGERQTPEWYKEKGIEMIYQDPVTSIDIE----K--QTLITNSGKLLKY 163 (489)
Q Consensus 111 ----------~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~----~--~~v~~~~g~~i~y 163 (489)
-.+.+... .......+.+.+++.|++++.+++|+++..+ . ..|.+.++ ++.+
T Consensus 79 ~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~a 157 (401)
T 2gqf_A 79 TNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQC 157 (401)
T ss_dssp CHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEE
T ss_pred CHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEEC
Confidence 00000000 0000011223345679999999999998744 2 35666666 7999
Q ss_pred CcEEecCCCCCC
Q 011267 164 GSLIVATGCTAS 175 (489)
Q Consensus 164 d~lvlATG~~~~ 175 (489)
|++|+|||+.+.
T Consensus 158 d~VVlAtG~~s~ 169 (401)
T 2gqf_A 158 KNLIVATGGLSM 169 (401)
T ss_dssp SEEEECCCCSSC
T ss_pred CEEEECCCCccC
Confidence 999999999874
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.22 E-value=4.7e-12 Score=128.33 Aligned_cols=95 Identities=17% Similarity=0.251 Sum_probs=71.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccC--------CCCCCchhhhc--C
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--------AKPTVSPFERV--G 317 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G--------~~p~~~~~~~~--g 317 (489)
+..+...+...+++.| ++++ ++.|++|+..++ .+ .|.+.+|+++.||.||+|+| +.|+.+..... +
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~-~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~ 278 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRL-QTVVTGIDQSGD-VV-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIE 278 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEES-SCCEEEEECSSS-SE-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEe-CCEEEEEEEcCC-eE-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHH
Confidence 3445556667777778 9999 999999986543 44 48888998899999999999 88887653322 2
Q ss_pred CeecCCcEEeCCCCCCCCCCeEEeccccc
Q 011267 318 LNSSVGGIQVDGQFRTRMPGIFAIGDVAA 346 (489)
Q Consensus 318 l~~~~g~i~vd~~~~t~~~~Iya~GD~a~ 346 (489)
.......++|+..++|+.++||+.||+..
T Consensus 279 ~~~~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 279 EGHGGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp HCCCCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred hCCCcceEEEEEEECCCCcCceEcCCCCE
Confidence 21223469999999999999999999853
No 100
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.20 E-value=4.5e-11 Score=114.10 Aligned_cols=164 Identities=17% Similarity=0.181 Sum_probs=111.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhC-CCcEEEEccCCcchhh------------------------------------h-hCH
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLLQR------------------------------------L-FTP 249 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~l~~------------------------------------~-~~~ 249 (489)
.+|+|||+|++|+.+|..|++. |.+|+++++.+.+... . ...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 9999999988644210 0 123
Q ss_pred HHHHHHHHHHHh-cCcEEEEcCceEEEEEeCCCCcEEEEEeC---------CC-----cEEEcCEEEEccCCCCCCch--
Q 011267 250 SLAQRYEQLYQQ-NGVKFVKVGASIKNLEAGSDGRVAAVKLE---------DG-----STIDADTIVIGIGAKPTVSP-- 312 (489)
Q Consensus 250 ~~~~~l~~~l~~-~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~---------~g-----~~i~aD~vi~a~G~~p~~~~-- 312 (489)
.+...+.+.+.+ .|+++++ ++.|+++..+ ++++.+|.+. +| .++.||.||+|+|..++...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~-~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFN-AVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEE-TEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred HHHHHHHHHHHhcCCCEEEc-CcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 445556666655 6999999 9999999854 4556566653 32 57999999999998876431
Q ss_pred ---hhhcC----CeecCCcEEeCC-------CCCCCCCCeEEeccccccCCccCCcccccccHHHHHHHHHHHHHHHhc
Q 011267 313 ---FERVG----LNSSVGGIQVDG-------QFRTRMPGIFAIGDVAAFPLKMYDRTARVEHVDHARQSAQHCIKALLS 377 (489)
Q Consensus 313 ---~~~~g----l~~~~g~i~vd~-------~~~t~~~~Iya~GD~a~~~~~~~~~~~~~~~~~~A~~~g~~~a~~l~~ 377 (489)
+...+ +... .++.+|. +.+++.|++|++||++... .+.......+..+..+|+.+|.++..
T Consensus 198 ~~~~~~~g~~~~v~~~-~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~---~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 198 VKRLKSIGMIDHVPGM-KALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI---DGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHHHTTSSSCCCCC-EEECHHHHHHHHHHHCEEEETTEEECTHHHHHH---HTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccCCCCcCCc-CCchhhhhhHHHhhccccccCCEEEEeeehhhh---cCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 22222 2111 3343332 3456789999999987521 11111122456677888888888864
No 101
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.15 E-value=3.7e-12 Score=131.35 Aligned_cols=170 Identities=14% Similarity=-0.056 Sum_probs=99.3
Q ss_pred ccccceeeeeecceec---CCCCCceeee-ccccccccccccccc-------c-----------ccCCCCCCcEEEEcCc
Q 011267 3 SVSNSLSFKHGLSLWC---PQSPSLHRIR-HSSAKNFQRRGFVVA-------Y-----------SSFANENREFVIVGGG 60 (489)
Q Consensus 3 ~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~-------~-----------~~~~~~~~~vvIIGgG 60 (489)
..+||||..||++|+. .|...|.+.. +.+......+..... . .......+||+|||||
T Consensus 22 ~~~~~~~~~~~rvc~~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG 101 (497)
T 2bry_A 22 FETFVQAQLCQDVLSSFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAG 101 (497)
T ss_dssp HHHHHHCCSHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCS
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECcc
Confidence 3579999999999987 6888887743 222222222211110 1 1113457899999999
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCccc---cCCCCC----CCCCCCCCCccccCCCCCCCChhHHHH
Q 011267 61 NAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKG---YLFPLD----KKPARLPGFHTCVGSGGERQTPEWYKE 132 (489)
Q Consensus 61 ~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~-~l~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (489)
++|+++|..|++.|. +|+|||+.+.....+. .+... .+.... ........+...........+.+.+++
T Consensus 102 ~aGl~aA~~La~~G~---~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 178 (497)
T 2bry_A 102 PCGLRAAVELALLGA---RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALL 178 (497)
T ss_dssp HHHHHHHHHHHHTTC---EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCC---eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHh
Confidence 999999999999986 7999999876431100 00000 000000 000000000000000000112234456
Q ss_pred CCcEEEeCCcEEEEeCC-----CCEEEe--C-CC--eEEeeCcEEecCCCCCC
Q 011267 133 KGIEMIYQDPVTSIDIE-----KQTLIT--N-SG--KLLKYGSLIVATGCTAS 175 (489)
Q Consensus 133 ~~i~~~~~~~V~~id~~-----~~~v~~--~-~g--~~i~yd~lvlATG~~~~ 175 (489)
.+++++.+++|+++..+ ...|.+ . +| .++.+|.||+|+|..+.
T Consensus 179 ~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 179 LGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp TTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred CCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 79999999999999863 235666 3 56 46899999999998865
No 102
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.08 E-value=2.3e-10 Score=101.23 Aligned_cols=108 Identities=18% Similarity=0.194 Sum_probs=73.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCcc-ccCCCCCCCChhH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPEW 129 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 129 (489)
++||+|||||++|+.+|..|++.|. +|+|||+.+........+ ..+++++. ..+........+.
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~---~v~lie~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~ 65 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGL---KVLVLDGGRSKVKGVSRV------------PNYPGLLDEPSGEELLRRLEAH 65 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCTTTTCSCC------------CCSTTCTTCCCHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCcccCchhh------------hccCCCcCCCCHHHHHHHHHHH
Confidence 3689999999999999999999876 799999987432111111 01111100 0000001223445
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--CEEEeCCCeEEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~--~~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
+++.+++++.+ +|++++.+. ..+.+.+| ++.+|.+|+|+|..|.
T Consensus 66 ~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 66 ARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH
T ss_pred HHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC
Confidence 67789999998 999998644 36777788 7999999999999873
No 103
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.07 E-value=3.6e-10 Score=118.90 Aligned_cols=37 Identities=24% Similarity=0.315 Sum_probs=32.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
..+||||||||+||++||..|++.|. +.+|+|||+.+
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~-~~~V~vlEk~~ 40 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANP-NAKIALISKVY 40 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCT-TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCC-CCcEEEEeCCC
Confidence 35799999999999999999999983 34799999975
No 104
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.00 E-value=3.4e-09 Score=110.22 Aligned_cols=159 Identities=15% Similarity=0.103 Sum_probs=91.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC-CCCCCCCCCccccCC-----------CCC------C--CC-
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA-YAPYERPALTKGYLF-----------PLD------K--KP- 108 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~-~~~y~~~~l~~~~~~-----------~~~------~--~~- 108 (489)
..+||||||||+||++||..|++.|. +|+|||+.. ......+..+.+... +.. . ..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~---kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGA---KTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---CEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 35899999999999999999999986 799999874 222111111111000 000 0 00
Q ss_pred -----CCCCCCcccc-CCC---CCCCChhHHHH-CCcEEEeCCcEEEEeCCCC---EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 109 -----ARLPGFHTCV-GSG---GERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 109 -----~~~~~~~~~~-~~~---~~~~~~~~~~~-~~i~~~~~~~V~~id~~~~---~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
..-+...... ..+ ......+.+++ .|++++ +.+|+.+..+.. .|.+.+|.++.++.+|+|||..+.
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 0000000000 000 00011223444 489985 579999876544 367888989999999999998765
Q ss_pred CCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEE
Q 011267 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTII 236 (489)
Q Consensus 176 ~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv 236 (489)
. +..+| ...+ ...+ .|+.++.++|..|.++|.++..+
T Consensus 182 ~-~~~~G-----~~~~--------------~~Gr----~G~~~A~~la~~L~~lG~~v~~l 218 (637)
T 2zxi_A 182 G-VIYIG-----DKMI--------------PGGR----LGEPRSEGLSDFYRRFDFPLIRF 218 (637)
T ss_dssp C-EEEET-----TEEE--------------ECSB----TTBCCBCTHHHHHHHTTCCCEEE
T ss_pred C-ceecc-----ceec--------------CCCC----CCchhHHHHHHHHHhcCCceEEe
Confidence 2 22222 1111 1122 23567788999999988876554
No 105
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.99 E-value=1.8e-09 Score=106.55 Aligned_cols=68 Identities=13% Similarity=0.269 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEccCCCCCCchhhhc-CC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVSPFERV-GL 318 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~aD~vi~a~G~~p~~~~~~~~-gl 318 (489)
+..+...+.+.+++.|+++++ +++|+++..++++.+ .|.+.+| .++.||.||+|+|.... .+++.+ |+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~-~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~~g~ 219 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVF-HTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHAP-GLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEEC-SCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGHH-HHHHTEETS
T ss_pred HHHHHHHHHHHHHHCCCEEEC-CCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcchH-HHHHHhcCC
Confidence 346778888889999999999 999999987654434 4788887 48999999999998754 566666 55
No 106
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.98 E-value=1.8e-10 Score=118.68 Aligned_cols=147 Identities=14% Similarity=0.089 Sum_probs=103.3
Q ss_pred eeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHH---------HHh--hcCCCcEEEECCCHHHHHHHHHHHhCC
Q 011267 162 KYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADAL---------ISS--LEKAKKVVVVGGGYIGMEVAAAAVGWK 230 (489)
Q Consensus 162 ~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~---------~~~--~~~~~~vvViG~G~~g~e~A~~l~~~g 230 (489)
.||++++++|+++.. +.+++..++++.......+..++ ... .....+|+|||||+.|+.+|..|++.|
T Consensus 37 ~~~~l~~~~g~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~~G 115 (497)
T 2bry_A 37 SFQGLCRALGVESGG-GLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELALLG 115 (497)
T ss_dssp HHHHHHHHHTCCTTC-HHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCC-CcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHHCC
Confidence 578999999998753 33333233344444444454444 111 123568999999999999999999999
Q ss_pred CcEEEEccCCcch--------hh------------------------hhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEe
Q 011267 231 LDTTIIFPENHLL--------QR------------------------LFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEA 278 (489)
Q Consensus 231 ~~V~lv~~~~~~l--------~~------------------------~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~ 278 (489)
.+|+++++.+.+. +. .-...+.+.+.+.+++.|+++++ +++|+++..
T Consensus 116 ~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~-~~~v~~i~~ 194 (497)
T 2bry_A 116 ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHW-GVKFTGLQP 194 (497)
T ss_dssp CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEE-SCEEEEEEC
T ss_pred CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEe-CCEEEEEEE
Confidence 9999999876431 00 00145667788888889999999 999999985
Q ss_pred CC-CCcEEEEEe--C-CC--cEEEcCEEEEccCCCCCC
Q 011267 279 GS-DGRVAAVKL--E-DG--STIDADTIVIGIGAKPTV 310 (489)
Q Consensus 279 ~~-~~~v~~v~~--~-~g--~~i~aD~vi~a~G~~p~~ 310 (489)
++ ++....|.+ . +| +++.+|.||.|+|..+..
T Consensus 195 ~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 195 PPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp CCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 32 222335665 4 56 579999999999998765
No 107
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.97 E-value=1e-12 Score=138.84 Aligned_cols=60 Identities=13% Similarity=0.262 Sum_probs=47.4
Q ss_pred HHhcCcEEEEcCceEEEEEeCCC-CcEEEEEeC---CCc--EEEcCEEEEccCCCCCCchhhhcCCe
Q 011267 259 YQQNGVKFVKVGASIKNLEAGSD-GRVAAVKLE---DGS--TIDADTIVIGIGAKPTVSPFERVGLN 319 (489)
Q Consensus 259 l~~~Gv~~~~~~~~v~~i~~~~~-~~v~~v~~~---~g~--~i~aD~vi~a~G~~p~~~~~~~~gl~ 319 (489)
+++.||++++ ++.|+++..+++ +++.+|++. +|+ ++.||.||+|+|..|+..+|..+|+-
T Consensus 270 ~~~~nv~v~~-~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 270 APEERFNLFP-AVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp EEEEEEEEEC-SEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSS
T ss_pred ccCCCEEEEe-CCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCC
Confidence 3445899999 999999986543 377778775 354 68899999999999998888877663
No 108
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.95 E-value=1.1e-09 Score=113.14 Aligned_cols=57 Identities=25% Similarity=0.365 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 249 PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 249 ~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
..+.+.+.+.+++.|++|++ ++.|++|..+ ++++++|++++|+++.||.||++++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~-~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVL-NARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEEC-SCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceee-ecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 46778888999999999999 9999999854 678889999999999999999988754
No 109
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.93 E-value=1.1e-08 Score=107.36 Aligned_cols=61 Identities=20% Similarity=0.250 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC--CCc--EEEcCEEEEccCCCCC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 309 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~aD~vi~a~G~~p~ 309 (489)
...+...+.+.+++.||++++ ++.|+++..++++++.+|.+. +|+ ++.||.||+|+|..++
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~-~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRL-NSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEES-SEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHHcCCeEEe-cCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 446777888889999999999 999999975533777777765 564 6899999999997664
No 110
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.88 E-value=3.3e-09 Score=107.88 Aligned_cols=66 Identities=23% Similarity=0.393 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhcCcEEEEcCceEEEEEeC--------------CCCcEEEEEeCCCcEE--EcCEEEEccCCCCCCch
Q 011267 249 PSLAQRYEQLYQQNGVKFVKVGASIKNLEAG--------------SDGRVAAVKLEDGSTI--DADTIVIGIGAKPTVSP 312 (489)
Q Consensus 249 ~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~--------------~~~~v~~v~~~~g~~i--~aD~vi~a~G~~p~~~~ 312 (489)
..+...+.+.+++.|++++. +++|+++..+ +++++..|.+.+| ++ .||.||+|+|.... .+
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~-~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~-~l 257 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIF-GRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN-RL 257 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-SCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH-HH
T ss_pred HHHHHHHHHHHHhCCCEEEc-CCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH-HH
Confidence 37788888899999999999 9999999851 3455667888888 68 99999999998653 45
Q ss_pred hhhcC
Q 011267 313 FERVG 317 (489)
Q Consensus 313 ~~~~g 317 (489)
+..+|
T Consensus 258 ~~~~g 262 (448)
T 3axb_A 258 LNPLG 262 (448)
T ss_dssp HGGGT
T ss_pred HHHcC
Confidence 55544
No 111
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.87 E-value=3.6e-09 Score=97.60 Aligned_cols=117 Identities=15% Similarity=0.160 Sum_probs=70.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCC-CCccccCC---CCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLP-GFHTCVGS---GGERQ 125 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~ 125 (489)
+.+||+|||||++|+.+|..|++.|. +|+|||+...... .+ ... .+.... ...+. .+....+. .....
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~---~v~lie~~~~~~G-~~-~~~-~~~~~~--~~~~~~~~~d~~g~~~~~~~~~ 73 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGV---RVGLLTQSLDAVM-MP-FLP-PKPPFP--PGSLLERAYDPKDERVWAFHAR 73 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTT-CC-SSC-CCSCCC--TTCHHHHHCCTTCCCHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCcCC-cc-cCc-cccccc--hhhHHhhhccCCCCCHHHHHHH
Confidence 46899999999999999999999976 7999999732111 00 000 000000 00000 00000000 00011
Q ss_pred ChhHHHHC-CcEEEeCCcEEEEeCCCC---EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 126 TPEWYKEK-GIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 126 ~~~~~~~~-~i~~~~~~~V~~id~~~~---~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
..+.+++. +++++. ++|++++.+.. .+.+.+|.++.+|.+|+|||....
T Consensus 74 l~~~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 74 AKYLLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 22344555 899885 69999876543 466788888999999999998654
No 112
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.86 E-value=4.6e-09 Score=109.61 Aligned_cols=160 Identities=14% Similarity=0.164 Sum_probs=90.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC-CCCCCCCCccccCCCCC--CCCCCCCC------------C
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY-APYERPALTKGYLFPLD--KKPARLPG------------F 114 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~-~~y~~~~l~~~~~~~~~--~~~~~~~~------------~ 114 (489)
..+||||||||+||++||..|++.|. +|+|||+.+. .....+..+.+.+.... .....+.+ +
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQ---QTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCC---CEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 46899999999999999999999986 6999998742 21111111111000000 00000000 0
Q ss_pred cc---ccCCC------------CCCCChhHHHH-CCcEEEeCCcEEEEeCCCC---EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 115 HT---CVGSG------------GERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 115 ~~---~~~~~------------~~~~~~~~~~~-~~i~~~~~~~V~~id~~~~---~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
.. ..+.. ......+.+++ .|++++ +.+|+.+..+.. .|.+.+|.++.+|.+|+|||+.+.
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 00 00000 00011223444 589985 569999976544 467788888999999999998765
Q ss_pred CCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEc
Q 011267 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIF 237 (489)
Q Consensus 176 ~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~ 237 (489)
. +. .+|.... .+.+ +| |.+++++|..|.++|.+|+.+.
T Consensus 183 ~-~~-----i~G~~~~--------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 183 G-KI-----HIGLDNY--------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp C-EE-----ECC-------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred C-cc-----ccCcccC--------------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 3 22 2222111 1222 46 7889999999999999988774
No 113
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.85 E-value=8.3e-08 Score=102.89 Aligned_cols=67 Identities=15% Similarity=0.158 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCc-EEEcCEEEEccCCCCCCchhhhcCC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGS-TIDADTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~-~i~aD~vi~a~G~~p~~~~~~~~gl 318 (489)
+..+...+.+.+++.|+++++ +++|+++..++++ + .|.+.+|+ ++.||.||+|+|.... .++...++
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~-~t~V~~l~~~~~~-v-~V~t~~G~~~i~Ad~VVlAtG~~s~-~l~~~~~l 478 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHY-QHELQRLKRIDSQ-W-QLTFGQSQAAKHHATVILATGHRLP-EWEQTHHL 478 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-SCCEEEEEECSSS-E-EEEEC-CCCCEEESEEEECCGGGTT-CSTTTTTS
T ss_pred HHHHHHHHHHHHHhCCCEEEe-CCeEeEEEEeCCe-E-EEEeCCCcEEEECCEEEECCCcchh-ccccccCC
Confidence 356777888888999999999 9999999865444 3 68888887 8999999999998754 44444444
No 114
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.85 E-value=2.1e-09 Score=108.04 Aligned_cols=124 Identities=20% Similarity=0.264 Sum_probs=72.3
Q ss_pred CCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-------CCCCcc------ccCCCCCCCC-----
Q 011267 47 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-------RPALTK------GYLFPLDKKP----- 108 (489)
Q Consensus 47 ~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~-------~~~l~~------~~~~~~~~~~----- 108 (489)
|.++++||+|||||+||++||..|++.|. +|+|+|+.+..... ++.+.. .++.......
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~---~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~ 99 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGR---RVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALA 99 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHH
Confidence 44567899999999999999999999986 79999998754210 010000 0000000000
Q ss_pred -------------------CCCCCCccccC--CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCc
Q 011267 109 -------------------ARLPGFHTCVG--SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGS 165 (489)
Q Consensus 109 -------------------~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~ 165 (489)
..-.+...... ......+.+.+++.+++++.+++|+++..+.. .|.+.+| ++.+|+
T Consensus 100 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~ 178 (417)
T 3v76_A 100 RYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAAS 178 (417)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESE
T ss_pred hcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeE
Confidence 00000000000 00001112334567999999999999976543 5667777 799999
Q ss_pred EEecCCCCC
Q 011267 166 LIVATGCTA 174 (489)
Q Consensus 166 lvlATG~~~ 174 (489)
||+|||..+
T Consensus 179 VIlAtG~~S 187 (417)
T 3v76_A 179 LVVASGGKS 187 (417)
T ss_dssp EEECCCCSS
T ss_pred EEECCCCcc
Confidence 999999876
No 115
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.83 E-value=1.4e-08 Score=106.02 Aligned_cols=59 Identities=20% Similarity=0.377 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHhc-CcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 249 PSLAQRYEQLYQQN-GVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 249 ~~~~~~l~~~l~~~-Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
..+.+.+.+.+++. |+++++ + +|+++..++++.+..|.+.+|+++.||.||.|+|....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~-~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVE-D-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEE-C-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHhcCCcEEEE-C-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 35677888888888 999999 8 99999876667777889999988999999999998765
No 116
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.82 E-value=1.5e-08 Score=105.39 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=31.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
..+||||||||+||++||.+|++ |. +|+|||+.+.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~---~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QH---QVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TS---CEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CC---cEEEEECCCC
Confidence 46899999999999999999999 86 6999999864
No 117
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.79 E-value=1.3e-07 Score=101.31 Aligned_cols=67 Identities=15% Similarity=0.195 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl 318 (489)
+..+...+.+.+++.|+++++ +++|+++..+++ .+ .|.+.+|+++.||.||+|+|.... .++...++
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~-~t~V~~l~~~~~-~v-~V~t~~G~~i~Ad~VVlAtG~~s~-~l~~~~~l 482 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYY-QYQLQNFSRKDD-CW-LLNFAGDQQATHSVVVLANGHQIS-RFSQTSTL 482 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-SCCEEEEEEETT-EE-EEEETTSCEEEESEEEECCGGGGG-CSTTTTTC
T ss_pred HHHHHHHHHHHHHhCCCEEEe-CCeeeEEEEeCC-eE-EEEECCCCEEECCEEEECCCcchh-ccccccCC
Confidence 356777888888999999999 999999986543 44 688888888999999999998753 34433333
No 118
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.79 E-value=2.6e-08 Score=102.96 Aligned_cols=112 Identities=15% Similarity=0.288 Sum_probs=89.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh-----------------------------------------
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 245 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~----------------------------------------- 245 (489)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+..+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987533000
Q ss_pred ------------------------------hhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEE
Q 011267 246 ------------------------------LFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTI 295 (489)
Q Consensus 246 ------------------------------~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i 295 (489)
.....+.+.+.+.+++.|+++++ +++|+++..+ ++.+..|.+.+|+++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~-~t~V~~I~~~-~~~v~gV~l~~G~~i 264 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRF-STRVDDLHME-DGQITGVTLSNGEEI 264 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEES-SCCEEEEEES-SSBEEEEEETTSCEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEe-CCEEEEEEEe-CCEEEEEEECCCCEE
Confidence 00145666778888889999999 9999999854 566778999999999
Q ss_pred EcCEEEEccCCCCCC--chhhhcCCee
Q 011267 296 DADTIVIGIGAKPTV--SPFERVGLNS 320 (489)
Q Consensus 296 ~aD~vi~a~G~~p~~--~~~~~~gl~~ 320 (489)
.||.||+|+|..+.. .++...|+..
T Consensus 265 ~Ad~VVlA~G~~s~~~~~~l~~~Gi~~ 291 (549)
T 3nlc_A 265 KSRHVVLAVGHSARDTFEMLHERGVYM 291 (549)
T ss_dssp ECSCEEECCCTTCHHHHHHHHHTTCCC
T ss_pred ECCEEEECCCCChhhHHHHHHHcCCCc
Confidence 999999999998853 2455556543
No 119
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.78 E-value=1e-08 Score=101.90 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=75.4
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCC---------------ccccCCCCCCCCCCCC-
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL---------------TKGYLFPLDKKPARLP- 112 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l---------------~~~~~~~~~~~~~~~~- 112 (489)
|+.+||+|||||++|+++|..|++.|. +|+|+|+.+......... ...+.. .......+.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~---~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~-~~~~~~~~~~ 84 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGW---DVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQ-GSHTPPTYET 84 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHT-TCBCCSCEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHh-hCCCccceEE
Confidence 456899999999999999999999986 799999986542110000 000000 000000000
Q ss_pred ---CCc--ccc--CC--------CCCCCChhHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCC
Q 011267 113 ---GFH--TCV--GS--------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 113 ---~~~--~~~--~~--------~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
+.. ... +. .....+.+.+.+.|++++.+++|++++.+. .|++.+|.++.+|.||.|+|..+.
T Consensus 85 ~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 85 WMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCH
T ss_pred EeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHH
Confidence 000 000 00 000111233456799999999999998855 888889989999999999998753
No 120
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.76 E-value=7.1e-08 Score=96.43 Aligned_cols=66 Identities=18% Similarity=0.306 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCC
Q 011267 249 PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 249 ~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl 318 (489)
..+...+.+.+++.|++++. +++|+++..+ ++.+..|.+.+| ++.+|.||+|+|.... .+++.+++
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~-~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~-~l~~~~g~ 239 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQ-NCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSS-VLAEMAGF 239 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEC-SCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHH-HHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCEEEc-CCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHH-HHHHHcCC
Confidence 36777888889999999999 9999999864 456667888888 7999999999998754 34444443
No 121
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.74 E-value=1e-08 Score=106.45 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=38.7
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
.....++.|+++++ ++.|++|... ++.+ .|.+.+|+++.||.||++++..
T Consensus 218 ~~~l~~~lg~~i~~-~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 218 SERIMDLLGDRVKL-ERPVIYIDQT-RENV-LVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHGGGEES-SCCEEEEECS-SSSE-EEEETTSCEEEESEEEECSCGG
T ss_pred HHHHHHHcCCcEEc-CCeeEEEEEC-CCeE-EEEECCCeEEEeCEEEECCCHH
Confidence 33344445889999 9999999854 3445 3888899999999999999864
No 122
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.71 E-value=3.3e-08 Score=102.18 Aligned_cols=123 Identities=16% Similarity=0.211 Sum_probs=75.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC--------------CC---CCCCc-cc-cCCCCCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--------------YE---RPALT-KG-YLFPLDKKPAR 110 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~--------------y~---~~~l~-~~-~~~~~~~~~~~ 110 (489)
..+||||||||++|++||+.|++.|+ +|+|||+.+... +. ..... .+ ..+...+....
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~---kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~ 182 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGF---NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQ 182 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTC---CCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEE
Confidence 45899999999999999999999987 699999985420 00 00000 00 00000000000
Q ss_pred CCC--C--------------cc-cc--CC---------CCCCCChhHHHHCCcEEEeCCcEEEEeCCCC---EEEeCCCe
Q 011267 111 LPG--F--------------HT-CV--GS---------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGK 159 (489)
Q Consensus 111 ~~~--~--------------~~-~~--~~---------~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~---~v~~~~g~ 159 (489)
+.. + +. .. .. .....+.+.+++.|++++.+++|+++..+.. .|.+.+|+
T Consensus 183 i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~ 262 (549)
T 3nlc_A 183 VKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGE 262 (549)
T ss_dssp SCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSC
T ss_pred eccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCC
Confidence 000 0 00 00 00 0000112334567999999999999987654 47788999
Q ss_pred EEeeCcEEecCCCCCC
Q 011267 160 LLKYGSLIVATGCTAS 175 (489)
Q Consensus 160 ~i~yd~lvlATG~~~~ 175 (489)
++.+|.||+|+|..+.
T Consensus 263 ~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 263 EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp EEECSCEEECCCTTCH
T ss_pred EEECCEEEECCCCChh
Confidence 9999999999999873
No 123
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.71 E-value=1.4e-08 Score=103.21 Aligned_cols=123 Identities=20% Similarity=0.302 Sum_probs=73.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-------CCCCCcc-----ccC--CCCCCCCC-----
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK-----GYL--FPLDKKPA----- 109 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y-------~~~~l~~-----~~~--~~~~~~~~----- 109 (489)
.+.+||+|||||+||++||..|++.|. +|+|||+.+.... .+..+.. .++ ........
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~---~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGA---NVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFS 100 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCC---CEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHH
Confidence 346899999999999999999999876 7999999764320 0010000 000 00000000
Q ss_pred CC-----------CCCccc---cC---------CCCCCCChhHHHHCCcEEEeCCcEEEEeCCCC---EEEeCCCeEEee
Q 011267 110 RL-----------PGFHTC---VG---------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKY 163 (489)
Q Consensus 110 ~~-----------~~~~~~---~~---------~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~---~v~~~~g~~i~y 163 (489)
.+ .+.... .+ ......+.+.+++.|++++.+++|+++..+.. .|.+.+|.++.+
T Consensus 101 ~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~A 180 (447)
T 2i0z_A 101 IFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLET 180 (447)
T ss_dssp HSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEEC
T ss_pred hcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEEC
Confidence 00 000000 00 00001112334567999999999999975443 477788877999
Q ss_pred CcEEecCCCCC
Q 011267 164 GSLIVATGCTA 174 (489)
Q Consensus 164 d~lvlATG~~~ 174 (489)
|.||+|||..+
T Consensus 181 d~VVlAtGg~s 191 (447)
T 2i0z_A 181 NHVVIAVGGKS 191 (447)
T ss_dssp SCEEECCCCSS
T ss_pred CEEEECCCCCc
Confidence 99999999876
No 124
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.70 E-value=2.1e-07 Score=94.14 Aligned_cols=60 Identities=23% Similarity=0.266 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCc---eEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGA---SIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~---~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
+..+...+.+.+++.|+++++ ++ .|+++..+ ++.+.+|++.+|+++.||.||+|+|....
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~-~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVT-GTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-STTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEe-CCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 346777888889999999999 99 99999854 56777799999988999999999998653
No 125
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.66 E-value=2e-07 Score=92.39 Aligned_cols=66 Identities=15% Similarity=0.188 Sum_probs=51.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 317 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~g 317 (489)
+..+...+.+.+++.|++++. +++|+++..+ ++.+.+|.+.+| ++.||.||+|+|.... .+++.++
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~-~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~-~l~~~~g 213 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLE-YTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWAN-LINAMAG 213 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEEC-SCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHH-HHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCEEEC-CceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHH-HHHHHcC
Confidence 346777788888999999999 9999999864 456666888877 7999999999998754 3444444
No 126
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.66 E-value=2e-07 Score=91.23 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=78.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh---------------------h-h---------CHHHHHHHH
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR---------------------L-F---------TPSLAQRYE 256 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~---------------------~-~---------~~~~~~~l~ 256 (489)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+... . + ...+.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 47999999999999999999999999999988643110 0 0 057788888
Q ss_pred HHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 257 QLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 257 ~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
+.+++.|+++++ +++|+++...+ +....|.+.+| ++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~-~~~v~~i~~~~-~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLR-PIRVQRVSHFG-ERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEEC-SCCEEEEEEET-TEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEc-CCEEEEEEECC-CcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 999999999999 99999998653 33322777777 89999999999963
No 127
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.64 E-value=8.6e-08 Score=93.26 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=69.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---------CccccCCCC-----------------
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---------LTKGYLFPL----------------- 104 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~---------l~~~~~~~~----------------- 104 (489)
++||+|||||++|+++|..|++.|. +|+|+|+.+........ ....++...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~---~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHV 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC---cEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCe
Confidence 4799999999999999999999987 79999998643110000 000000000
Q ss_pred ------------CCCCCCCCCCccccCCCCCCCChhHHH--HCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEe-eCcEE
Q 011267 105 ------------DKKPARLPGFHTCVGSGGERQTPEWYK--EKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLK-YGSLI 167 (489)
Q Consensus 105 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~-yd~lv 167 (489)
................ .....+.+ ..+++++.+++|++++.+.. +|++.+|..+. +|+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV 155 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPSPDEQVRWVGK---PGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVI 155 (336)
T ss_dssp EEECCCEEEESSSBCCCCCTTSCEEEES---SCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEE
T ss_pred eeccccceeccCcccccCCCCCccEEcC---ccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEE
Confidence 0000000000000000 01112222 23889999999999986543 67778887664 99999
Q ss_pred ecCCCC
Q 011267 168 VATGCT 173 (489)
Q Consensus 168 lATG~~ 173 (489)
+|+|..
T Consensus 156 ~a~g~~ 161 (336)
T 1yvv_A 156 IATPAP 161 (336)
T ss_dssp ECSCHH
T ss_pred EcCCHH
Confidence 999964
No 128
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.64 E-value=7.6e-09 Score=102.59 Aligned_cols=66 Identities=18% Similarity=0.150 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl 318 (489)
+..+...+.+.+++.|+++++ ++.|+++..+++ . ..|++.+| ++.||.||+|+|.... .++..+++
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~-~~~V~~i~~~~~-~-~~V~t~~g-~i~a~~VV~A~G~~s~-~l~~~~g~ 218 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLC-NHEALEIRRVDG-A-WEVRCDAG-SYRAAVLVNAAGAWCD-AIAGLAGV 218 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEES-SCCCCEEEEETT-E-EEEECSSE-EEEESEEEECCGGGHH-HHHHHHTC
T ss_pred HHHHHHHHHHHHHHCCCEEEc-CCEEEEEEEeCC-e-EEEEeCCC-EEEcCEEEECCChhHH-HHHHHhCC
Confidence 346777888889999999999 999999986543 3 46888877 8999999999998653 44554443
No 129
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.63 E-value=2.7e-07 Score=91.67 Aligned_cols=79 Identities=18% Similarity=0.400 Sum_probs=58.4
Q ss_pred CcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCC
Q 011267 231 LDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 310 (489)
Q Consensus 231 ~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~ 310 (489)
....++.+....+. +..+...+.+.+++.|++++. ++.|++++..+++ + .|.+.+| ++.||.||+|+|...+
T Consensus 135 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~-~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~~~- 206 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLT-HTRVEDFDISPDS-V-KIETANG-SYTADKLIVSMGAWNS- 206 (389)
T ss_dssp TEEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEEC-SCCEEEEEECSSC-E-EEEETTE-EEEEEEEEECCGGGHH-
T ss_pred CceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEc-CcEEEEEEecCCe-E-EEEeCCC-EEEeCEEEEecCccHH-
Confidence 34566666554443 357778888899999999999 9999999865443 3 4667666 7999999999998764
Q ss_pred chhhhcC
Q 011267 311 SPFERVG 317 (489)
Q Consensus 311 ~~~~~~g 317 (489)
.++..++
T Consensus 207 ~l~~~~g 213 (389)
T 2gf3_A 207 KLLSKLN 213 (389)
T ss_dssp HHGGGGT
T ss_pred HHhhhhc
Confidence 4555544
No 130
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.63 E-value=1.8e-07 Score=93.87 Aligned_cols=100 Identities=22% Similarity=0.283 Sum_probs=79.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhh---------------------------------------
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL--------------------------------------- 246 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~--------------------------------------- 246 (489)
...+|+|||||..|+.+|..|++.|.+|+++++.+.+....
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 35689999999999999999999999999999876431100
Q ss_pred ------------------------hCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEE
Q 011267 247 ------------------------FTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVI 302 (489)
Q Consensus 247 ------------------------~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~ 302 (489)
....+.+.+.+.+++.|+++++ +++|+++..+++ . ..|.+.+| ++.||.||+
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~-~~~V~~i~~~~~-~-~~V~~~~g-~i~ad~VIl 181 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRL-ETSIGEVERTAS-G-FRVTTSAG-TVDAASLVV 181 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEEC-SCCEEEEEEETT-E-EEEEETTE-EEEESEEEE
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEE-CCEEEEEEEeCC-E-EEEEECCc-EEEeeEEEE
Confidence 0125666778888889999999 999999986543 3 46788888 899999999
Q ss_pred ccCCCCC
Q 011267 303 GIGAKPT 309 (489)
Q Consensus 303 a~G~~p~ 309 (489)
|+|..+.
T Consensus 182 AtG~~S~ 188 (417)
T 3v76_A 182 ASGGKSI 188 (417)
T ss_dssp CCCCSSC
T ss_pred CCCCccC
Confidence 9999863
No 131
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.62 E-value=1.8e-07 Score=90.61 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=81.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhh------------------hCHHHHHHHHHHHHhcCcEEEEc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------FTPSLAQRYEQLYQQNGVKFVKV 269 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~------------------~~~~~~~~l~~~l~~~Gv~~~~~ 269 (489)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.... ...++...+.+.+++.|+++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 86 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICL- 86 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEEC-
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEc-
Confidence 579999999999999999999999999999976432110 1357778888888889999999
Q ss_pred CceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCC---CCCC
Q 011267 270 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA---KPTV 310 (489)
Q Consensus 270 ~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~---~p~~ 310 (489)
+++|+++...+++. ..|.+.+|+ +.+|.||+|+|. .|..
T Consensus 87 ~~~v~~i~~~~~~~-~~v~~~~g~-~~~d~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 87 EQAVESVEKQADGV-FKLVTNEET-HYSKTVIITAGNGAFKPRK 128 (332)
T ss_dssp SCCEEEEEECTTSC-EEEEESSEE-EEEEEEEECCTTSCCEECC
T ss_pred cCEEEEEEECCCCc-EEEEECCCE-EEeCEEEECCCCCcCCCCC
Confidence 99999998654423 357888885 999999999999 6653
No 132
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.62 E-value=1.4e-07 Score=94.20 Aligned_cols=124 Identities=12% Similarity=0.078 Sum_probs=73.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-C--Cccc---cC--CCC--CCCCCCCCCCccc-
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-A--LTKG---YL--FPL--DKKPARLPGFHTC- 117 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~-~--l~~~---~~--~~~--~~~~~~~~~~~~~- 117 (489)
++++||+|||||++|+++|..|++.|. +|+|+|+.+.....+. . +... .+ ... .............
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 79 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGV---DVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVD 79 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEe
Confidence 456899999999999999999999987 7999999865311100 0 0000 00 000 0000000000000
Q ss_pred --cCC-------CCC----CCChhHHHH--CCcEEEeCCcEEEEeCCC--CEEEeCCCeEEeeCcEEecCCCCCC
Q 011267 118 --VGS-------GGE----RQTPEWYKE--KGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 118 --~~~-------~~~----~~~~~~~~~--~~i~~~~~~~V~~id~~~--~~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
.+. ... ..+.+.+.+ .+++++.+++|++++.+. -++++.+|.++.+|.||.|+|....
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 80 ALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp TTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred cCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 000 000 011122222 378999999999997654 3677888989999999999998653
No 133
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.59 E-value=4.1e-08 Score=98.14 Aligned_cols=123 Identities=14% Similarity=0.173 Sum_probs=72.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCC--cc---------c----c------------CC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL--TK---------G----Y------------LF 102 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l--~~---------~----~------------~~ 102 (489)
+++||+|||||++|+++|..|++.|. +|+|+|+.+......... .. + + ..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~---~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGH---RVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVY 81 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEe
Confidence 45799999999999999999999987 699999986531110000 00 0 0 00
Q ss_pred CCCCCCCCCC--CC--ccccCCCCCCCCh----hHHHHC-CcEEEeCCcEEEEeCCCC----EEEeCCCeEEeeCcEEec
Q 011267 103 PLDKKPARLP--GF--HTCVGSGGERQTP----EWYKEK-GIEMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVA 169 (489)
Q Consensus 103 ~~~~~~~~~~--~~--~~~~~~~~~~~~~----~~~~~~-~i~~~~~~~V~~id~~~~----~v~~~~g~~i~yd~lvlA 169 (489)
........++ .. ......-....+. +.+.+. +++++.+++|++++.+.. .+++.+|+++.+|.||.|
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~A 161 (399)
T 2x3n_A 82 HDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGA 161 (399)
T ss_dssp ETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEEC
T ss_pred CCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEEC
Confidence 0000000000 00 0000000000111 122334 899999999999986543 677888988999999999
Q ss_pred CCCCCC
Q 011267 170 TGCTAS 175 (489)
Q Consensus 170 TG~~~~ 175 (489)
+|....
T Consensus 162 dG~~s~ 167 (399)
T 2x3n_A 162 DGIASY 167 (399)
T ss_dssp CCTTCH
T ss_pred CCCChH
Confidence 998653
No 134
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.59 E-value=7.1e-07 Score=92.79 Aligned_cols=104 Identities=15% Similarity=0.199 Sum_probs=83.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh------------------------------------hhCHH
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------LFTPS 250 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------------------------~~~~~ 250 (489)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ...++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 357999999999999999999999999999986532100 01246
Q ss_pred HHHHHHHHHHhcCc--EEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccC--CCCCCc
Q 011267 251 LAQRYEQLYQQNGV--KFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPTVS 311 (489)
Q Consensus 251 ~~~~l~~~l~~~Gv--~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G--~~p~~~ 311 (489)
+.+.+.+..++.|+ ++++ +++|+++..++++....|.+.+|+++.||.||+|+| .+|..+
T Consensus 101 i~~yl~~~~~~~g~~~~i~~-~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRF-DTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEEC-SCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCC
T ss_pred HHHHHHHHHHHcCCCccEEE-CCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCC
Confidence 77788888888998 7899 999999987666555678899999999999999999 556543
No 135
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.58 E-value=8.8e-08 Score=96.49 Aligned_cols=57 Identities=14% Similarity=0.279 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
...+.+.+.+.+++.|+++++ ++.|++|..+ ++++ | ..+|+++.||.||+|+|....
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~-~~~V~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILT-RKEVVEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEES-SCCEEEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEc-CCeEEEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHH
Confidence 357788889999999999999 9999999853 4454 4 567889999999999997543
No 136
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.57 E-value=7.4e-08 Score=96.00 Aligned_cols=122 Identities=18% Similarity=0.222 Sum_probs=71.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---Ccccc-----CCCCCCC-CCCCCCCccc--c
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---LTKGY-----LFPLDKK-PARLPGFHTC--V 118 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~---l~~~~-----~~~~~~~-~~~~~~~~~~--~ 118 (489)
+++||+|||||++|+++|..|++.|. +|+|+|+++........ ++..+ +.+.... ...+.+.... .
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~---~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCC
Confidence 45899999999999999999999987 79999998754321100 00000 0000000 0000000000 0
Q ss_pred CCC-------------CC--------CCChhHHHHCCcEEEeCCcEEEEeCCCCE---EEe---CCCeEEeeCcEEecCC
Q 011267 119 GSG-------------GE--------RQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LIT---NSGKLLKYGSLIVATG 171 (489)
Q Consensus 119 ~~~-------------~~--------~~~~~~~~~~~i~~~~~~~V~~id~~~~~---v~~---~~g~~i~yd~lvlATG 171 (489)
+.. .. ..+.+.+.+.|++++.+++|+++..+... |.+ .++.++.+|.+|.|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G 159 (397)
T 3cgv_A 80 EKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADG 159 (397)
T ss_dssp CSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCC
Confidence 000 00 00112234569999999999998766543 444 3556899999999999
Q ss_pred CCC
Q 011267 172 CTA 174 (489)
Q Consensus 172 ~~~ 174 (489)
...
T Consensus 160 ~~s 162 (397)
T 3cgv_A 160 FES 162 (397)
T ss_dssp TTC
T ss_pred cch
Confidence 764
No 137
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.57 E-value=3.6e-07 Score=91.25 Aligned_cols=124 Identities=14% Similarity=0.176 Sum_probs=72.0
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC----Cc----cccC-------------CCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA----LT----KGYL-------------FPLDKK 107 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~----l~----~~~~-------------~~~~~~ 107 (489)
++.+||+|||||++|+++|..|++.|. +|+|+|+.+........ +. ...+ .+....
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 100 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGI---DVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVN 100 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC---EEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceE
Confidence 456899999999999999999999986 79999998653221000 00 0000 000000
Q ss_pred CCCCCCC-------ccccCCCCCC----CChhHHHHC--CcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCC
Q 011267 108 PARLPGF-------HTCVGSGGER----QTPEWYKEK--GIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGC 172 (489)
Q Consensus 108 ~~~~~~~-------~~~~~~~~~~----~~~~~~~~~--~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~ 172 (489)
.....+. +......... .+.+.+.+. +.+++.+++|++++.+.. ++++.+|.++.+|.||.|+|.
T Consensus 101 ~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 101 IADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp EECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred EECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 0000000 0000000000 011222221 357888999999986543 677888988999999999998
Q ss_pred CCC
Q 011267 173 TAS 175 (489)
Q Consensus 173 ~~~ 175 (489)
...
T Consensus 181 ~S~ 183 (398)
T 2xdo_A 181 MSK 183 (398)
T ss_dssp TCS
T ss_pred chh
Confidence 764
No 138
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.57 E-value=1.1e-07 Score=99.47 Aligned_cols=122 Identities=16% Similarity=0.146 Sum_probs=70.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---------------CCccccCCCCCCCCCC-CCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---------------ALTKGYLFPLDKKPAR-LPG 113 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~---------------~l~~~~~~~~~~~~~~-~~~ 113 (489)
+.+||+|||||++|+++|..|++.|. +|+|||+.+....... .+...+.......... +.+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~---~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~ 124 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGV---GALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAG 124 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTC---CEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCC
Confidence 46899999999999999999999987 6999999765421100 0000000000000000 000
Q ss_pred -----Cc--cccCCC--CCCC--------ChhHHHHCCcEEEeCCcEEEEeCCCC--EEEe--CCC-eEEeeCcEEecCC
Q 011267 114 -----FH--TCVGSG--GERQ--------TPEWYKEKGIEMIYQDPVTSIDIEKQ--TLIT--NSG-KLLKYGSLIVATG 171 (489)
Q Consensus 114 -----~~--~~~~~~--~~~~--------~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~--~~g-~~i~yd~lvlATG 171 (489)
+. ...... .... +.+.+.+.+++++.+++|+.++.+.. ++++ .+| .++.+|.||.|+|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG 204 (570)
T 3fmw_A 125 IFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDG 204 (570)
T ss_dssp BCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSC
T ss_pred cccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCC
Confidence 00 000000 0000 11233456999999999999977654 4555 678 6899999999999
Q ss_pred CCC
Q 011267 172 CTA 174 (489)
Q Consensus 172 ~~~ 174 (489)
...
T Consensus 205 ~~S 207 (570)
T 3fmw_A 205 GRS 207 (570)
T ss_dssp SSC
T ss_pred CCc
Confidence 864
No 139
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.57 E-value=5.1e-08 Score=98.09 Aligned_cols=122 Identities=19% Similarity=0.212 Sum_probs=71.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCccc---cCC--C-------C------------
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTKG---YLF--P-------L------------ 104 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~-~l~~~---~~~--~-------~------------ 104 (489)
+.+||+|||||++|+++|..|++.|. +|+|+|+.+...+..- .+... ++. . .
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~---~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 80 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGF---KVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVR 80 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEe
Confidence 45899999999999999999999987 7999999864321110 00000 000 0 0
Q ss_pred CCC--CCCCCCCccc-cCCCC---CCC----ChhHHHHCCcEEEeCCcEEEEeCCCC----EEEeCCCe--EEeeCcEEe
Q 011267 105 DKK--PARLPGFHTC-VGSGG---ERQ----TPEWYKEKGIEMIYQDPVTSIDIEKQ----TLITNSGK--LLKYGSLIV 168 (489)
Q Consensus 105 ~~~--~~~~~~~~~~-~~~~~---~~~----~~~~~~~~~i~~~~~~~V~~id~~~~----~v~~~~g~--~i~yd~lvl 168 (489)
... ...+...... ..... ... +.+.+++.|++++.+++|++++.+.. .+.+.+|. ++.+|.+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 81 GKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp TTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEE
T ss_pred CCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEE
Confidence 000 0000000000 00000 000 11233456999999999999886533 34557787 699999999
Q ss_pred cCCCCC
Q 011267 169 ATGCTA 174 (489)
Q Consensus 169 ATG~~~ 174 (489)
|+|...
T Consensus 161 A~G~~s 166 (421)
T 3nix_A 161 ASGYGR 166 (421)
T ss_dssp CCGGGC
T ss_pred CCCCch
Confidence 999764
No 140
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.55 E-value=6.7e-08 Score=91.92 Aligned_cols=122 Identities=10% Similarity=0.102 Sum_probs=69.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc-CCCCCcEEEEcCCCCCCCCCCCCccccCC-----CCC-------CCCCCCC-CCc
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAPYERPALTKGYLF-----PLD-------KKPARLP-GFH 115 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~-g~~~~~V~li~~~~~~~y~~~~l~~~~~~-----~~~-------~~~~~~~-~~~ 115 (489)
.++||+|||||++|+++|..|++. |. +|+|||+.+..... .....+.+. ... ..+.... .+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~---~V~viEk~~~~gg~-~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~ 113 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNV---QVAIIEQSVSPGGG-AWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYV 113 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTS---CEEEEESSSSCCTT-TTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCC---eEEEEECCCCCCCc-eecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEE
Confidence 467999999999999999999996 65 79999998754211 000000000 000 0000000 000
Q ss_pred cc-cCCCCCCCChhHHHH-CCcEEEeCCcEEEEeCCCCEE---EeC---------CC-----eEEeeCcEEecCCCCCC
Q 011267 116 TC-VGSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQTL---ITN---------SG-----KLLKYGSLIVATGCTAS 175 (489)
Q Consensus 116 ~~-~~~~~~~~~~~~~~~-~~i~~~~~~~V~~id~~~~~v---~~~---------~g-----~~i~yd~lvlATG~~~~ 175 (489)
.. ........+.+.+.+ .+++++.+++|++++.+...+ .+. +| .++.+|.+|+|||..+.
T Consensus 114 ~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 114 VVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp EESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred EecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 00 000000011122333 589999999999998655432 331 32 57999999999998664
No 141
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.55 E-value=1.4e-07 Score=92.29 Aligned_cols=118 Identities=17% Similarity=0.242 Sum_probs=69.7
Q ss_pred CcEEEEcCchHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCC----CC----CC--c--cccCCCCCC----------
Q 011267 52 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYE----RP----AL--T--KGYLFPLDK---------- 106 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~---~g~~~~~V~li~~~~~~~y~----~~----~l--~--~~~~~~~~~---------- 106 (489)
+||+|||||++|+++|+.|++ .|. +|+|+|+++..... +. .. . ..++.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~---~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 78 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL---YLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYD 78 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE---EEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc---eEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHH
Confidence 689999999999999999999 765 79999998643210 00 00 0 000000000
Q ss_pred ------CCCCC----------CCCccccCCCCCCCCh-hHHHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEE
Q 011267 107 ------KPARL----------PGFHTCVGSGGERQTP-EWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLI 167 (489)
Q Consensus 107 ------~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lv 167 (489)
....+ ................ .+.++.+++++++++|++|+.+.. +|.+.+|.++.+|+||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV 158 (342)
T 3qj4_A 79 ELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIV 158 (342)
T ss_dssp HHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEE
T ss_pred HHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEE
Confidence 00000 0000000111111111 223345899999999999987543 6777788878999999
Q ss_pred ecCCC
Q 011267 168 VATGC 172 (489)
Q Consensus 168 lATG~ 172 (489)
+|+..
T Consensus 159 ~A~p~ 163 (342)
T 3qj4_A 159 LTMPV 163 (342)
T ss_dssp ECSCH
T ss_pred ECCCH
Confidence 99974
No 142
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.54 E-value=1.8e-07 Score=97.97 Aligned_cols=124 Identities=22% Similarity=0.344 Sum_probs=73.0
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CCcc---------c-----------------c
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-ALTK---------G-----------------Y 100 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~-~l~~---------~-----------------~ 100 (489)
.|+.+||||||||+||+++|..|++.|. +|+|||+.+....... .+.. + +
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~---~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 96 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGH---DVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATF 96 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEE
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCC---CEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEE
Confidence 3557899999999999999999999986 7999999854322110 0000 0 0
Q ss_pred CCCCCCCCC--CCCCCcc---ccCCCCC-------CCChhHHHHCCcEEEeCCcEEEEeCC-C--CEEEeC-CC--eEEe
Q 011267 101 LFPLDKKPA--RLPGFHT---CVGSGGE-------RQTPEWYKEKGIEMIYQDPVTSIDIE-K--QTLITN-SG--KLLK 162 (489)
Q Consensus 101 ~~~~~~~~~--~~~~~~~---~~~~~~~-------~~~~~~~~~~~i~~~~~~~V~~id~~-~--~~v~~~-~g--~~i~ 162 (489)
......... .+..... ....... ..+.+.+.+.|++++.+++|+++..+ . ..|.+. +| .++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~ 176 (591)
T 3i3l_A 97 LWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVE 176 (591)
T ss_dssp ECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEE
T ss_pred EecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEE
Confidence 000000000 0000000 0000000 00122344679999999999999864 2 256665 66 5799
Q ss_pred eCcEEecCCCCC
Q 011267 163 YGSLIVATGCTA 174 (489)
Q Consensus 163 yd~lvlATG~~~ 174 (489)
+|.+|.|+|...
T Consensus 177 AdlVV~AdG~~S 188 (591)
T 3i3l_A 177 SDFVIDAGGSGG 188 (591)
T ss_dssp ESEEEECCGGGC
T ss_pred cCEEEECCCCcc
Confidence 999999999764
No 143
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.54 E-value=5.1e-07 Score=90.14 Aligned_cols=99 Identities=11% Similarity=0.204 Sum_probs=78.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh--------------------hh---------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ--------------------RL--------------------- 246 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~--------------------~~--------------------- 246 (489)
.+|+|||+|..|+.+|..|++.|.+|+++++.+.+.. ..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4699999999999999999999999999998764310 00
Q ss_pred ----------------------hCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCC---CCcEEEEEeCCCcEEEcCEEE
Q 011267 247 ----------------------FTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGS---DGRVAAVKLEDGSTIDADTIV 301 (489)
Q Consensus 247 ----------------------~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~---~~~v~~v~~~~g~~i~aD~vi 301 (489)
....+.+.+.+.+++.||++++ ++.|+++..++ ++.+ .|.+.+| ++.||.||
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~-~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VV 161 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILL-RSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLI 161 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEEC-SCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEe-CCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEE
Confidence 1244556778888889999999 99999998541 2333 5777776 79999999
Q ss_pred EccCCCCC
Q 011267 302 IGIGAKPT 309 (489)
Q Consensus 302 ~a~G~~p~ 309 (489)
+|+|..+.
T Consensus 162 lAtG~~s~ 169 (401)
T 2gqf_A 162 VATGGLSM 169 (401)
T ss_dssp ECCCCSSC
T ss_pred ECCCCccC
Confidence 99999884
No 144
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.54 E-value=4.1e-08 Score=102.42 Aligned_cols=161 Identities=12% Similarity=0.174 Sum_probs=90.4
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC-CCCCCCCCccccC-----------CCCC-----------
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY-APYERPALTKGYL-----------FPLD----------- 105 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~-~~y~~~~l~~~~~-----------~~~~----------- 105 (489)
...+||+|||||+||++||..|++.|. +|+|||+... .+...+..+.+.. .+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~ 95 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGL---HCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQ 95 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCC---cEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCc
Confidence 346899999999999999999999986 6999998742 2111111111000 0000
Q ss_pred -C--CCCCCCCCccc---cC-CCCCCCChhHHHH-CCcEEEeCCcEEEEeCCCCE---EEeCCCeEEeeCcEEecCCCCC
Q 011267 106 -K--KPARLPGFHTC---VG-SGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTA 174 (489)
Q Consensus 106 -~--~~~~~~~~~~~---~~-~~~~~~~~~~~~~-~~i~~~~~~~V~~id~~~~~---v~~~~g~~i~yd~lvlATG~~~ 174 (489)
. ....-+..... .. ........+.+++ .|++++. .+|+.+..+... |.+.+|.++.+|.+|+|||..+
T Consensus 96 f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 96 FRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp EEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred hhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 0 00000000000 00 0000011223444 4899865 589988765443 6678888999999999999876
Q ss_pred CCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCcEEEECCCHHHHHHHHHHHhCCCcEEEE
Q 011267 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTII 236 (489)
Q Consensus 175 ~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv 236 (489)
.... .++ .... ...++ + |+.++++++..|.+.|.++..+
T Consensus 175 ~~~i-~~G-----~~~~--------------~~g~~--v-G~~~a~~la~~L~~~G~kv~~l 213 (641)
T 3cp8_A 175 NGLI-HIG-----MDHF--------------PGGRS--T-AEPPVEGLTESLASLGFSFGRL 213 (641)
T ss_dssp TCEE-EET-----TEEE--------------ECSSS--T-TSCCBCSHHHHHHHTTCCEEEE
T ss_pred Cccc-eee-----eeee--------------ccccc--c-CCchhhhhHHHHHhCCceEEee
Confidence 4211 111 1111 01121 1 3567788999999999887654
No 145
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.54 E-value=5.1e-07 Score=87.70 Aligned_cols=97 Identities=18% Similarity=0.229 Sum_probs=78.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh------------------hhCHHHHHHHHHHHHhcCcEEEEc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------LFTPSLAQRYEQLYQQNGVKFVKV 269 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------~~~~~~~~~l~~~l~~~Gv~~~~~ 269 (489)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++.+.+.+.+++.|+++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~- 84 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSL- 84 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEE-
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEe-
Confidence 57999999999999999999999999999987643110 01256677788888888999999
Q ss_pred CceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 270 GASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 270 ~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
+++|+.+...++ ...|.+.+|+++.+|.||+|+|..
T Consensus 85 ~~~v~~i~~~~~--~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 85 GERAETLEREGD--LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp SCCEEEEEEETT--EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CCEEEEEEECCC--EEEEEECCCCEEEeCEEEECCCCC
Confidence 999999986533 235778888889999999999994
No 146
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.53 E-value=7.7e-07 Score=87.49 Aligned_cols=99 Identities=15% Similarity=0.196 Sum_probs=80.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh------------------hhCHHHHHHHHHHHHhcCcEEEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------LFTPSLAQRYEQLYQQNGVKFVK 268 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------~~~~~~~~~l~~~l~~~Gv~~~~ 268 (489)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .....+.+.+.+.+++.|+++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 468999999999999999999999999999987643110 01256777788888889999999
Q ss_pred cCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 269 VGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 269 ~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
+++|+.+...+++. ..|.+.+|+++.+|.+|+|+|..
T Consensus 94 -~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 -NETVTKYTKLDDGT-FETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp -SCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCTTC
T ss_pred -CCEEEEEEECCCce-EEEEECCCcEEEeeEEEEccCCC
Confidence 99999998654433 35788888899999999999994
No 147
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.53 E-value=1.3e-07 Score=94.06 Aligned_cols=101 Identities=24% Similarity=0.407 Sum_probs=78.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh-h-hhCH---------HHHHHHHHHHHhcCcEEEEcCceEE
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-R-LFTP---------SLAQRYEQLYQQNGVKFVKVGASIK 274 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~-~-~~~~---------~~~~~l~~~l~~~Gv~~~~~~~~v~ 274 (489)
...+|+|||+|+.|+.+|..|...+.+|+++++.+.+.- + .++. ++.....+.+++.||++++ +++|+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~-~~~V~ 86 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVIT-SEFAT 86 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEEC-SCCEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEe-CCEEE
Confidence 456899999999999999999888899999998865311 0 0111 1112345667788999999 99999
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 275 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
+++.. .+ .|++++|+++.+|.+|+|||.+|...
T Consensus 87 ~id~~--~~--~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 87 SIDPN--NK--LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EEETT--TT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEECC--CC--EEEECCCCEEECCEEEEecCCCcCCC
Confidence 99843 23 57889999999999999999988754
No 148
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.52 E-value=3.4e-07 Score=88.92 Aligned_cols=102 Identities=15% Similarity=0.213 Sum_probs=79.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC----cc------------hhh----hhCHHHHHHHHHHHHhcCcE
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN----HL------------LQR----LFTPSLAQRYEQLYQQNGVK 265 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~----~~------------l~~----~~~~~~~~~l~~~l~~~Gv~ 265 (489)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+ .+ .+. ....++...+.+.+++.|++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 100 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTE 100 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 35789999999999999999999999999999843 11 011 12357788888999999999
Q ss_pred EEEcCceEEEEEeCCCCcEEEEEe---CCCcEEEcCEEEEccCCCCCCc
Q 011267 266 FVKVGASIKNLEAGSDGRVAAVKL---EDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 266 ~~~~~~~v~~i~~~~~~~v~~v~~---~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
++. ++ |+++... ++.+ .+.+ .++.++.+|.+|+|+|..|...
T Consensus 101 i~~-~~-v~~i~~~-~~~~-~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 101 IIT-ET-VSKVDLS-SKPF-KLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp EEC-SC-EEEEECS-SSSE-EEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred EEE-eE-EEEEEEc-CCEE-EEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 999 87 9999854 3333 4555 3677899999999999987643
No 149
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.52 E-value=5.9e-07 Score=93.19 Aligned_cols=102 Identities=17% Similarity=0.191 Sum_probs=82.4
Q ss_pred CcEEEECCCHHHHHHHHHHH-hCCCcEEEEccCCcchh--------h----------------------------hhCHH
Q 011267 208 KKVVVVGGGYIGMEVAAAAV-GWKLDTTIIFPENHLLQ--------R----------------------------LFTPS 250 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~-~~g~~V~lv~~~~~~l~--------~----------------------------~~~~~ 250 (489)
.+|+|||+|+.|+.+|..|+ +.|.+|+++++.+.+.. . ...++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 99999999998653210 0 00246
Q ss_pred HHHHHHHHHHhcCc--EEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCC--CCCC
Q 011267 251 LAQRYEQLYQQNGV--KFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA--KPTV 310 (489)
Q Consensus 251 ~~~~l~~~l~~~Gv--~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~--~p~~ 310 (489)
+.+.+.+..++.|+ ++++ +++|+++..++++....|.+.+|+++.||.||+|+|. +|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~-~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKF-GTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEE-SCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEe-ccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 67788888888998 8999 9999999876665556788999999999999999994 5553
No 150
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.51 E-value=1.3e-07 Score=95.68 Aligned_cols=101 Identities=22% Similarity=0.334 Sum_probs=78.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHh---CCCcEEEEccCCcchhhh----------hCHHHHHHHHHHHHhcCcEEEEcCceE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------FTPSLAQRYEQLYQQNGVKFVKVGASI 273 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~---~g~~V~lv~~~~~~l~~~----------~~~~~~~~l~~~l~~~Gv~~~~~~~~v 273 (489)
-++|+|||||+.|+.+|..|++ .+.+|+++++.+.+.... ...++...+.+.+++.||+++. .++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~--~~v 81 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA--QSA 81 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC--SCE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE--eEE
Confidence 3689999999999999999999 789999999987541110 1123333456778889999976 689
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchh
Q 011267 274 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 313 (489)
Q Consensus 274 ~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~ 313 (489)
+.++.+ ++ .|.+++|+++.+|.+|+|+|.+|+...+
T Consensus 82 ~~id~~--~~--~V~~~~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 82 EQIDAE--AQ--NITLADGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EEEETT--TT--EEEETTSCEEECSEEEECCCCEECGGGS
T ss_pred EEEEcC--CC--EEEECCCCEEECCEEEECCCCCcCcccC
Confidence 999743 22 5788899899999999999999875433
No 151
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.51 E-value=1.1e-07 Score=94.24 Aligned_cols=45 Identities=24% Similarity=0.287 Sum_probs=35.7
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCC
Q 011267 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTA 174 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~ 174 (489)
.+++.|++++.+++|++++.+.. .|.+.+| ++.+|.+|+|+|...
T Consensus 173 ~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 173 AAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH
Confidence 34567999999999999987554 4566666 799999999999754
No 152
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.50 E-value=5.3e-07 Score=85.82 Aligned_cols=100 Identities=11% Similarity=0.235 Sum_probs=77.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch---------h---hhhCHHHHHHHHHHHHhc-CcEEEEcCceEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL---------Q---RLFTPSLAQRYEQLYQQN-GVKFVKVGASIK 274 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l---------~---~~~~~~~~~~l~~~l~~~-Gv~~~~~~~~v~ 274 (489)
.+++|||+|+.|+.+|..|++.|.+|+++++.+... + .....++...+.+.+++. +++++. .+|+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~v~ 80 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVE--GRVT 80 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEE--SCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEE--eEEE
Confidence 479999999999999999999999999999753211 1 011246677788888877 788877 5899
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 275 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
.+...+++ ..|.+.+|+++.+|.+|+|+|..|...
T Consensus 81 ~i~~~~~~--~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 81 DAKGSFGE--FIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEEETTE--EEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEEcCCe--EEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 99865333 367888998999999999999987643
No 153
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.50 E-value=1.8e-07 Score=92.90 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=34.7
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
|++|||+||||||||++||..|+++|+ +|+|+|+.+..+
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~---~V~v~Er~~~~~ 40 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCCC
Confidence 456999999999999999999999988 699999976543
No 154
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.50 E-value=5.9e-07 Score=86.22 Aligned_cols=101 Identities=20% Similarity=0.268 Sum_probs=78.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCC--cch---------h--hhhCHHHHHHHHHHHHhcCcEEEEcCceEEE
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL---------Q--RLFTPSLAQRYEQLYQQNGVKFVKVGASIKN 275 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~--~~l---------~--~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~ 275 (489)
+++|||+|+.|+.+|..|++.|.+|+++++.. .+. . ....+.+.+.+.+.+++.|++++. +++|+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~v~~ 81 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVID-SQSASK 81 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEEC-SCCEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEc-cCEEEE
Confidence 68999999999999999999999999997531 111 0 011246777888888999999999 999999
Q ss_pred EEeCCC-CcEEEEEeCCCcEEEcCEEEEccCCCCCC
Q 011267 276 LEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 310 (489)
Q Consensus 276 i~~~~~-~~v~~v~~~~g~~i~aD~vi~a~G~~p~~ 310 (489)
+....+ +....|.+++|+++.+|.+|+|+|..|..
T Consensus 82 i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 82 LIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp EECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 975322 22346788888899999999999998764
No 155
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.49 E-value=6.2e-07 Score=93.86 Aligned_cols=141 Identities=15% Similarity=0.169 Sum_probs=93.9
Q ss_pred ecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhc----CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch
Q 011267 168 VATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE----KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 243 (489)
Q Consensus 168 lATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~----~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l 243 (489)
.++.+........+....++...++...+...+...+. ....|+|||+|..|+.+|..|++.|.+|+++++.+.+.
T Consensus 78 ~c~~ch~~~~~~~p~~~~~~~~~w~~~~~~~~i~~~i~~~~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~g 157 (566)
T 1qo8_A 78 YCNECHSFDIKPMPFSDAKKKKSWDDGWDQDKIQKAIAAGPSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSG 157 (566)
T ss_dssp GGGGTCCCCCCCCTTTTSCCCCCSCCCCCHHHHHHHHHTCCSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred hhhhhcCCCcCCCCCCCCCCCcccccccccHHHHHhhccCCCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 34555443312233444444444444333333322222 23479999999999999999999999999999875321
Q ss_pred hh------------------------------------------------------------------------------
Q 011267 244 QR------------------------------------------------------------------------------ 245 (489)
Q Consensus 244 ~~------------------------------------------------------------------------------ 245 (489)
..
T Consensus 158 g~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~ 237 (566)
T 1qo8_A 158 GNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVD 237 (566)
T ss_dssp TTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSC
T ss_pred CcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCC
Confidence 00
Q ss_pred ---------hhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC--CCc--EEEcCEEEEccCCCCC
Q 011267 246 ---------LFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTIVIGIGAKPT 309 (489)
Q Consensus 246 ---------~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~--~g~--~i~aD~vi~a~G~~p~ 309 (489)
.....+...+.+.+++.||++++ ++.|+++..++++++.+|++. +|+ ++.+|.||+|+|....
T Consensus 238 r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~-~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 238 RTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRL-NSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp CEEECSSSSCHHHHHHHHHHHHHHHTTCCEEC-SEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred ceeecCCCCCCHHHHHHHHHHHHHhcCCEEEe-CCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 00123445667777889999999 999999986543777777765 675 6899999999997654
No 156
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.48 E-value=7.6e-07 Score=88.26 Aligned_cols=97 Identities=21% Similarity=0.252 Sum_probs=79.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh----------------h-------------------------
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------------R------------------------- 245 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~----------------~------------------------- 245 (489)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. +
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 46899999999999999999999999999998754311 0
Q ss_pred --hh-----------CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 246 --LF-----------TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 246 --~~-----------~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
.+ ...+.+.+.+.+++.|+++++ +++|++++. ++ .|++.+|+++.+|.||.|+|..+.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~-~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISV-NSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEES-SCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEe-CCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHH
Confidence 00 045567788888889999999 999999985 34 577888989999999999999774
No 157
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.48 E-value=8.2e-07 Score=90.12 Aligned_cols=111 Identities=24% Similarity=0.389 Sum_probs=86.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh-------------------h-----------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-------------------R----------------------- 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~-------------------~----------------------- 245 (489)
..|+|||||..|+.+|..|++.|.+|+++++.+.+.. .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 5799999999999999999999999999998753210 0
Q ss_pred -------------------hh-----CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEE
Q 011267 246 -------------------LF-----TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIV 301 (489)
Q Consensus 246 -------------------~~-----~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi 301 (489)
.+ ...+.+.+.+.+++.||++++ +++|+++..+ ++.+..|.+.+|+++.||.||
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~-~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VV 184 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRT-NTPVETIEYE-NGQTKAVILQTGEVLETNHVV 184 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEEC-SCCEEEEEEE-TTEEEEEEETTCCEEECSCEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEe-CcEEEEEEec-CCcEEEEEECCCCEEECCEEE
Confidence 00 134455677778889999999 9999999854 566678889999889999999
Q ss_pred EccCCCCCC---------chhhhcCCee
Q 011267 302 IGIGAKPTV---------SPFERVGLNS 320 (489)
Q Consensus 302 ~a~G~~p~~---------~~~~~~gl~~ 320 (489)
+|+|..+.. .+++.+|+..
T Consensus 185 lAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 185 IAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp ECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred ECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 999987721 3556666654
No 158
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.47 E-value=3.9e-07 Score=91.71 Aligned_cols=57 Identities=19% Similarity=0.370 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCC
Q 011267 249 PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 308 (489)
Q Consensus 249 ~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p 308 (489)
..+.+.+.+.+++.|+++++ ++.|++|..+ ++++..|+++ |+++.||.||+|++...
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~-~~~V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHT-GQEVSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEEC-SCCEEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEE-CCceeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHH
Confidence 46778888999999999999 9999999864 4566667775 77899999999998643
No 159
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.45 E-value=1e-06 Score=84.82 Aligned_cols=100 Identities=20% Similarity=0.301 Sum_probs=79.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccC--Ccch--------h---hhhCHHHHHHHHHHHHhcCcEEEEcCceEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE--NHLL--------Q---RLFTPSLAQRYEQLYQQNGVKFVKVGASIK 274 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~--~~~l--------~---~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~ 274 (489)
.+|+|||+|+.|+.+|..|++.|.+|+++++. ..+. + .....++.+.+.+.+++.|++++. +.|+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~v~ 93 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL--DIVE 93 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE--SCEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE--EEEE
Confidence 58999999999999999999999999999985 1111 1 112357778888889999999998 7889
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 275 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
++..+++ . ..+.+.+|+++.+|.+|+|+|..|...
T Consensus 94 ~i~~~~~-~-~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 94 KIENRGD-E-FVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEEC---C-EEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEEecCC-E-EEEEECCCCEEEcCEEEECcCCCCccC
Confidence 9875432 2 357888888999999999999987643
No 160
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.44 E-value=1.4e-07 Score=94.45 Aligned_cols=125 Identities=12% Similarity=0.042 Sum_probs=70.6
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCC---------------Cccc------------c
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA---------------LTKG------------Y 100 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~---------------l~~~------------~ 100 (489)
.++++||+|||||++|+++|..|++.|. +|+|+|+.+........ +... +
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~---~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~ 96 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGI---DCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAY 96 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEE
Confidence 4457899999999999999999999987 79999998653210000 0000 0
Q ss_pred CCCC-CCCCCCCCCCc--ccc-CCCCC---CCChhHHHH--CCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEec
Q 011267 101 LFPL-DKKPARLPGFH--TCV-GSGGE---RQTPEWYKE--KGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVA 169 (489)
Q Consensus 101 ~~~~-~~~~~~~~~~~--~~~-~~~~~---~~~~~~~~~--~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlA 169 (489)
.... ......++... ... ..... ..+...+.+ ..++++.+++|+.++.+.. ++++.+|+++.+|.||.|
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~A 176 (407)
T 3rp8_A 97 RDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAA 176 (407)
T ss_dssp EETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEEC
T ss_pred EECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEEC
Confidence 0000 00000000000 000 00000 001112211 1277889999999986554 567789999999999999
Q ss_pred CCCCCC
Q 011267 170 TGCTAS 175 (489)
Q Consensus 170 TG~~~~ 175 (489)
+|....
T Consensus 177 dG~~S~ 182 (407)
T 3rp8_A 177 DGSHSA 182 (407)
T ss_dssp CCTTCS
T ss_pred CCcChH
Confidence 998653
No 161
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.44 E-value=2.5e-07 Score=94.14 Aligned_cols=99 Identities=17% Similarity=0.282 Sum_probs=75.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||++|+.+|..|++.|. +|+++++.+... |.... .+ .....+.
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~---~V~lv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 217 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGA---EVIVLEYMDRIL---PTMDL-----------EV-----------SRAAERV 217 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEecCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35789999999999999999999876 799999876521 10000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++.+++|.+++.+.. .+.+.+|.++.+|.+|+|||..|..
T Consensus 218 l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 218 FKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 7788999999999999987654 4556688889999999999988763
No 162
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.43 E-value=2.7e-07 Score=96.02 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=33.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
+.++||+|||||++|+++|..|+++|. +|+|||+.+..
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~---~v~viEr~~~~ 40 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGV---RVLVVERRPGL 40 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSSSC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 356899999999999999999999987 69999998653
No 163
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.42 E-value=6e-07 Score=94.15 Aligned_cols=37 Identities=38% Similarity=0.553 Sum_probs=32.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc------CCCCCcEEEEcCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAYA 89 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~------g~~~~~V~li~~~~~~ 89 (489)
+.+||||||||+||+++|..|++. |. +|+|||+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~---~V~vlEk~~~~ 76 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDL---RVCLVEKAAHI 76 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCC---CEEEECSSSST
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCC---cEEEEeCCCCC
Confidence 358999999999999999999998 66 79999998654
No 164
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.42 E-value=4.5e-07 Score=95.01 Aligned_cols=38 Identities=26% Similarity=0.436 Sum_probs=33.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
...+||||||||+||++||..|++.|. +|+|||+.+..
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~---~V~vlEk~~~~ 161 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGA---KVILIEKEPVI 161 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 346899999999999999999999986 69999998754
No 165
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.42 E-value=1.6e-07 Score=96.64 Aligned_cols=121 Identities=14% Similarity=0.191 Sum_probs=72.5
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC---------------CCCccccCCCCCCCCCC--
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYER---------------PALTKGYLFPLDKKPAR-- 110 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~---------------~~l~~~~~~~~~~~~~~-- 110 (489)
..+++||+|||||++|+++|..|++.|. +|+|||+.+...... ..+...+... ....
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~---~~~~~~ 81 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGV---EVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV---ETSTQG 81 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC---CBCCEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc---cccccc
Confidence 4567899999999999999999999987 699999986532110 0000000000 0000
Q ss_pred -CCCC--ccc-cCCCC-----------CCCChhHHHHCCcEEEeCCcEEEEeCCCC--EEEeCCCe---EEeeCcEEecC
Q 011267 111 -LPGF--HTC-VGSGG-----------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVAT 170 (489)
Q Consensus 111 -~~~~--~~~-~~~~~-----------~~~~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~---~i~yd~lvlAT 170 (489)
+.+. ... ..... ...+.+.+.+.+++++.+++|++++.+.. ++++.++. ++.+|+||.|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgAD 161 (500)
T 2qa1_A 82 HFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCD 161 (500)
T ss_dssp EETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECC
T ss_pred cccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECC
Confidence 0000 000 00000 00011233456899999999999976544 45555553 78999999999
Q ss_pred CCCC
Q 011267 171 GCTA 174 (489)
Q Consensus 171 G~~~ 174 (489)
|...
T Consensus 162 G~~S 165 (500)
T 2qa1_A 162 GGRS 165 (500)
T ss_dssp CTTC
T ss_pred Ccch
Confidence 9875
No 166
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.41 E-value=8e-07 Score=92.34 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=80.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch-------------------------h---------hh--hCHH
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------Q---------RL--FTPS 250 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------~---------~~--~~~~ 250 (489)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. + .. -.++
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~e 88 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPE 88 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHH
Confidence 3579999999999999999999999999999875320 0 00 1256
Q ss_pred HHHHHHHHHHhcCc--EEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccC--CCCCC
Q 011267 251 LAQRYEQLYQQNGV--KFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIG--AKPTV 310 (489)
Q Consensus 251 ~~~~l~~~l~~~Gv--~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G--~~p~~ 310 (489)
+.+.+.+..++.|+ .+++ +++|+++..++++....|.+++|+++.||.||+|+| .+|+.
T Consensus 89 i~~yl~~~~~~~~l~~~i~~-~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRF-NTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEEC-SCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHHcCCcCcEEE-CCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 77788888888887 7888 999999986655455578899999999999999999 55653
No 167
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.40 E-value=1.7e-06 Score=83.00 Aligned_cols=100 Identities=10% Similarity=0.158 Sum_probs=71.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc---c-------h--hhhhCHHHHHHHHHHHHhcC-cEEEEcCceEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L-------L--QRLFTPSLAQRYEQLYQQNG-VKFVKVGASIK 274 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~---~-------l--~~~~~~~~~~~l~~~l~~~G-v~~~~~~~~v~ 274 (489)
-.|+|||+|+.|+.+|..+++.|.+|+++++... + . +...++++.+...+.+.+.+ +.++. ..+.
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 84 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYE--KTVV 84 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEE--CCEE
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEe--eEEE
Confidence 3589999999999999999999999999987531 0 0 01123455555555555555 55554 5666
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCC
Q 011267 275 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 310 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~ 310 (489)
.+...+++. ..+.+.+|+++.+|.||+|||.+|..
T Consensus 85 ~~~~~~~~~-~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 85 MITKQSTGL-FEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp EEEECTTSC-EEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred EeeecCCCc-EEEEECCCCEEEeCEEEEccCCcccc
Confidence 665444444 36888999999999999999998764
No 168
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.40 E-value=4.4e-07 Score=91.64 Aligned_cols=96 Identities=24% Similarity=0.358 Sum_probs=72.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC--CcEEEEccCCcchhhhhCH----------HHHHHHHHHHHhcCcEEEEcCceEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLFTP----------SLAQRYEQLYQQNGVKFVKVGASIKN 275 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g--~~V~lv~~~~~~l~~~~~~----------~~~~~l~~~l~~~Gv~~~~~~~~v~~ 275 (489)
|+|+|||||+.|+.+|..|++++ .+|++|++.+.+.-...-+ ++...+.+.+++.||+++. .+|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~--~~v~~ 80 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFIN--EKAES 80 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEEC--SCEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEE--eEEEE
Confidence 68999999999999999999876 6899999987542111111 1111234556778999987 57999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 276 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 276 i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
|+.+ .+ .|++++|+++++|.+|+|+|.++.
T Consensus 81 Id~~--~~--~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 81 IDPD--AN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EETT--TT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred EECC--CC--EEEECCCCEEECCEEEEeCCCCcc
Confidence 9843 33 578899999999999999998753
No 169
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.40 E-value=2.5e-07 Score=96.79 Aligned_cols=38 Identities=24% Similarity=0.417 Sum_probs=33.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
...+||||||||+||++||..|++.|. +|+|||+.+..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~---~V~vlEk~~~~ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGA---NVILVDKAPFS 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTC---CEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 356799999999999999999999986 79999998754
No 170
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.40 E-value=2.6e-07 Score=95.07 Aligned_cols=123 Identities=14% Similarity=0.196 Sum_probs=72.3
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---------------CCccccCCCCCCCC-CCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---------------ALTKGYLFPLDKKP-ARL 111 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~---------------~l~~~~~~~~~~~~-~~~ 111 (489)
..+++||+|||||++|+++|..|++.|. +|+|||+.+....... .+...+.. ..... ..+
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~-~~~~~~~~~ 84 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGV---DVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGP-VETSTQGHF 84 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCS-CCEESEEEE
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHh-cccccccee
Confidence 3467899999999999999999999987 6999999865421100 00000000 00000 000
Q ss_pred CCC--ccc-cCCCC-----------CCCChhHHHHCCcEEEeCCcEEEEeCCCC--EEEeCCCe---EEeeCcEEecCCC
Q 011267 112 PGF--HTC-VGSGG-----------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGC 172 (489)
Q Consensus 112 ~~~--~~~-~~~~~-----------~~~~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~---~i~yd~lvlATG~ 172 (489)
.+. ... ..... ...+.+.+.+.+++++.+++|++++.+.. ++++.++. ++.+|+||.|.|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~ 164 (499)
T 2qa2_A 85 GGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGG 164 (499)
T ss_dssp TTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCT
T ss_pred cceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCc
Confidence 000 000 00000 00011233456899999999999976543 56666664 7999999999998
Q ss_pred CC
Q 011267 173 TA 174 (489)
Q Consensus 173 ~~ 174 (489)
..
T Consensus 165 ~S 166 (499)
T 2qa2_A 165 RS 166 (499)
T ss_dssp TC
T ss_pred cc
Confidence 75
No 171
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.39 E-value=1.8e-06 Score=87.96 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=77.8
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCc---EEEEccCCcchhh------------------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVG---WKLD---TTIIFPENHLLQR------------------------------------ 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~---~g~~---V~lv~~~~~~l~~------------------------------------ 245 (489)
++|+|||+|+.|+.+|..|++ .|.+ |+++++.+.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 579999999999999999999 9999 9999987532100
Q ss_pred --------------h-hCHHHHHHHHHHHHhcCcE--EEEcCceEEEEEeCCCCcEEEEEeCC---C--cEEEcCEEEEc
Q 011267 246 --------------L-FTPSLAQRYEQLYQQNGVK--FVKVGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIG 303 (489)
Q Consensus 246 --------------~-~~~~~~~~l~~~l~~~Gv~--~~~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~aD~vi~a 303 (489)
. -...+.+++.+.+++.|++ +++ +++|+.+...+++....|++.+ | .++.+|.||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~-~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRF-NTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEEC-SEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEe-CCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 0 0135666777888888998 888 9999999865443223455544 4 57899999999
Q ss_pred cC--CCCCCc
Q 011267 304 IG--AKPTVS 311 (489)
Q Consensus 304 ~G--~~p~~~ 311 (489)
+| ..|+.+
T Consensus 162 tG~~s~p~~p 171 (464)
T 2xve_A 162 TGHFSTPYVP 171 (464)
T ss_dssp CCSSSSBCCC
T ss_pred CCCCCCCccC
Confidence 99 677654
No 172
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.39 E-value=1.5e-06 Score=87.35 Aligned_cols=110 Identities=17% Similarity=0.205 Sum_probs=83.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc--------hhhh---------------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL--------LQRL--------------------------------- 246 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~--------l~~~--------------------------------- 246 (489)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.. .+..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIA 85 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCeeE
Confidence 47999999999999999999999999999986410 0000
Q ss_pred -----------------h-CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCc--EEEcCEEEEccCC
Q 011267 247 -----------------F-TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGS--TIDADTIVIGIGA 306 (489)
Q Consensus 247 -----------------~-~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~--~i~aD~vi~a~G~ 306 (489)
+ ...+...+.+.+++.|++++. +++|+++...+++.+..+.+.+|+ ++.||.||.|+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~-~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~ 164 (421)
T 3nix_A 86 DFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEY-EVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGY 164 (421)
T ss_dssp EEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEEC-SEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGG
T ss_pred EEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEc-CCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCC
Confidence 0 124556677777888999999 999999987655555567778887 7999999999998
Q ss_pred CCCCchhhhcCCee
Q 011267 307 KPTVSPFERVGLNS 320 (489)
Q Consensus 307 ~p~~~~~~~~gl~~ 320 (489)
.+ .+.+.++++.
T Consensus 165 ~s--~l~~~~g~~~ 176 (421)
T 3nix_A 165 GR--VIPRMFGLDK 176 (421)
T ss_dssp GC--HHHHHTTCEE
T ss_pred ch--hhHHhcCCCC
Confidence 76 3444555543
No 173
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.39 E-value=2.2e-06 Score=89.71 Aligned_cols=101 Identities=17% Similarity=0.166 Sum_probs=79.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh-----------------------------------------
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 245 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~----------------------------------------- 245 (489)
...|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 357999999999999999999999999999986532100
Q ss_pred ----------------------------------------------hhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeC
Q 011267 246 ----------------------------------------------LFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAG 279 (489)
Q Consensus 246 ----------------------------------------------~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~ 279 (489)
..+..+...+.+.+++.||++++ ++.|+++..+
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~-~~~v~~l~~~ 284 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRM-NTRGIEVLKD 284 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEES-SEEEEEEEEC
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEe-CCEeeEeEEc
Confidence 00134455677777889999999 9999999865
Q ss_pred CCCcEEEEEeC--CCc--EEEcCEEEEccCCCC
Q 011267 280 SDGRVAAVKLE--DGS--TIDADTIVIGIGAKP 308 (489)
Q Consensus 280 ~~~~v~~v~~~--~g~--~i~aD~vi~a~G~~p 308 (489)
+++++.+|++. +|+ ++.+|.||+|+|...
T Consensus 285 ~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 285 DKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp TTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred CCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 44777777665 675 689999999999854
No 174
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.38 E-value=2.4e-06 Score=84.02 Aligned_cols=97 Identities=16% Similarity=0.250 Sum_probs=75.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-cEEEEccCCcchh---------------------h--------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHLLQ---------------------R-------------------- 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~-~V~lv~~~~~~l~---------------------~-------------------- 245 (489)
.+|+|||+|+.|+.+|..|++.|. +|+++++.+ +.. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 83 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEE 83 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccccc
Confidence 469999999999999999999999 999999875 100 0
Q ss_pred -hhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 246 -LFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 246 -~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
.....+...+.+.+++.|+++++ ++.|+++...+++ ..|.+.++ ++.+|.||+|+|..+.
T Consensus 84 ~~~~~~~~~~l~~~~~~~gv~i~~-~~~v~~i~~~~~~--~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 84 HISGETYAEYLQVVANHYELNIFE-NTVVTNISADDAY--YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEEC-SCCEEEEEECSSS--EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEe-CCEEEEEEECCCe--EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 00134556677778889999999 9999999865433 24667776 6999999999999754
No 175
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.38 E-value=1.6e-06 Score=83.81 Aligned_cols=100 Identities=22% Similarity=0.269 Sum_probs=77.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc---c--------hhh----hhCHHHHHHHHHHHHhcCcEEEEcCce
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR----LFTPSLAQRYEQLYQQNGVKFVKVGAS 272 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~---~--------l~~----~~~~~~~~~l~~~l~~~Gv~~~~~~~~ 272 (489)
.+++|||+|+.|+.+|..|++.|.+|+++++... + .+. .....+.+.+.+.+++.|++++. .+
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~--~~ 86 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM--DE 86 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE--CC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe--ee
Confidence 5799999999999999999999999999998721 0 111 01246677788888899999988 48
Q ss_pred EEEEEeC--CCCcEEEEEeCCCcEEEcCEEEEccCCCCCC
Q 011267 273 IKNLEAG--SDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 310 (489)
Q Consensus 273 v~~i~~~--~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~ 310 (489)
++++... ++. ...|.+.+|+++.+|.+|+|+|..|..
T Consensus 87 v~~i~~~~~~~~-~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 87 VQGVQHDATSHP-YPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEEECTTSSS-CCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred EEEEEeccCCCc-eEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 8888754 222 124566788899999999999998764
No 176
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.38 E-value=4.3e-08 Score=99.83 Aligned_cols=123 Identities=16% Similarity=0.250 Sum_probs=70.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-CC-CC--CccccC--CC-CCCCCC----CCCCCcccc
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-ER-PA--LTKGYL--FP-LDKKPA----RLPGFHTCV 118 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y-~~-~~--l~~~~~--~~-~~~~~~----~~~~~~~~~ 118 (489)
+++||+|||||+||+++|..|++.|. +|+|+|+.+.... .. .. ++...+ .. ...... ...+.....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~---~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGL---KILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSC---CEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 35899999999999999999999887 7999999764210 10 00 000000 00 000000 000000000
Q ss_pred CC----------CC-------CCCChhHHHHCCcEEEeCCcEEEEeCCCCE---EEeC---CCe--EEeeCcEEecCCCC
Q 011267 119 GS----------GG-------ERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITN---SGK--LLKYGSLIVATGCT 173 (489)
Q Consensus 119 ~~----------~~-------~~~~~~~~~~~~i~~~~~~~V~~id~~~~~---v~~~---~g~--~i~yd~lvlATG~~ 173 (489)
.. .. ...+.+.+.+.|++++.+++|++++.+... |++. +|+ ++.+|.||.|+|..
T Consensus 82 ~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 82 PDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYS 161 (453)
T ss_dssp TTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGG
T ss_pred CCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCc
Confidence 00 00 000112234578999999999998866544 3443 665 78999999999976
Q ss_pred CC
Q 011267 174 AS 175 (489)
Q Consensus 174 ~~ 175 (489)
..
T Consensus 162 s~ 163 (453)
T 3atr_A 162 RS 163 (453)
T ss_dssp CT
T ss_pred hh
Confidence 54
No 177
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.37 E-value=4.6e-07 Score=90.57 Aligned_cols=99 Identities=22% Similarity=0.286 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CcEEEEccCCcchhhhhCHHHH---------HHHHHHHHhcCcEEEEcCceEEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLFTPSLA---------QRYEQLYQQNGVKFVKVGASIKN 275 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g--~~V~lv~~~~~~l~~~~~~~~~---------~~l~~~l~~~Gv~~~~~~~~v~~ 275 (489)
+|+|+|||+|+.|+.+|..|++.+ .+|++|++.+......+...+. ..-.+.+.+.||+++. .+|+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~--~~v~~ 79 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVH--DSALG 79 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEEC--SCEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEE--eEEEE
Confidence 689999999999999999998876 4799999887532111111110 0111345668999987 57999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 276 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 276 i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
|+.+ .+ .+.+.+|+++.+|.+|+|+|.+++..
T Consensus 80 id~~--~~--~v~~~~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 80 IDPD--KK--LVKTAGGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp EETT--TT--EEEETTSCEEECSEEEECCCEEECGG
T ss_pred EEcc--Cc--EEEecccceeecceeeeccCCccccC
Confidence 9743 33 47889999999999999999988643
No 178
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.37 E-value=4.7e-07 Score=93.61 Aligned_cols=124 Identities=18% Similarity=0.256 Sum_probs=71.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-CC-c---cccC-------------CC-------
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-AL-T---KGYL-------------FP------- 103 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~-~l-~---~~~~-------------~~------- 103 (489)
+.++||+|||||++|+++|..|++.|+ +|+|||+.+...+... .+ + ..++ ..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~---~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~ 81 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGH---RVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTF 81 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCC---CEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceE
Confidence 345899999999999999999999887 7999999863221100 00 0 0000 00
Q ss_pred -CCCCCC----CCCCCccccCCCCC-C-------CChhHHHHCCcEEEeCCcEEEEeCCCCE---E--EeCCCe--EEee
Q 011267 104 -LDKKPA----RLPGFHTCVGSGGE-R-------QTPEWYKEKGIEMIYQDPVTSIDIEKQT---L--ITNSGK--LLKY 163 (489)
Q Consensus 104 -~~~~~~----~~~~~~~~~~~~~~-~-------~~~~~~~~~~i~~~~~~~V~~id~~~~~---v--~~~~g~--~i~y 163 (489)
...... .+............ . .+.+.+.+.|++++.+++|+++..+... + ...+|. ++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~a 161 (512)
T 3e1t_A 82 RWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHA 161 (512)
T ss_dssp ECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEE
T ss_pred EecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEc
Confidence 000000 00000000000000 0 0122334579999999999999876542 3 334574 7999
Q ss_pred CcEEecCCCCCC
Q 011267 164 GSLIVATGCTAS 175 (489)
Q Consensus 164 d~lvlATG~~~~ 175 (489)
|.+|.|+|....
T Consensus 162 d~VI~AdG~~S~ 173 (512)
T 3e1t_A 162 RFIVDASGNRTR 173 (512)
T ss_dssp EEEEECCCTTCS
T ss_pred CEEEECCCcchH
Confidence 999999998754
No 179
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.37 E-value=2.6e-07 Score=92.71 Aligned_cols=98 Identities=21% Similarity=0.335 Sum_probs=74.6
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCcEEEEccCCcchhh----------hhCHHHHHHHHHHHHhcCcEEEEcCceEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQR----------LFTPSLAQRYEQLYQQNGVKFVKVGASIK 274 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~---~g~~V~lv~~~~~~l~~----------~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~ 274 (489)
++|+|||||+.|+.+|..|++ .|.+|+++++.+.+... ....++...+.+.+++.|++++. + +|+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~-~-~v~ 79 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQE-G-TVE 79 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEE-C-EEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEE-e-eEE
Confidence 579999999999999999999 89999999988754211 01122334466777889999998 6 999
Q ss_pred EEEeCCCCcEEEEEeCCCc----EEEcCEEEEccCCCCCCc
Q 011267 275 NLEAGSDGRVAAVKLEDGS----TIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~~~g~----~i~aD~vi~a~G~~p~~~ 311 (489)
.+..+ ++ .|.+.+++ ++.+|.+|+|+|.+|+.+
T Consensus 80 ~i~~~--~~--~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 80 KIDAK--SS--MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EEETT--TT--EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EEeCC--CC--EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 99743 22 35566664 399999999999988754
No 180
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.35 E-value=1.2e-06 Score=85.05 Aligned_cols=99 Identities=16% Similarity=0.255 Sum_probs=76.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcc----CCcc------------hhh----hhCHHHHHHHHHHHHhcCcEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFP----ENHL------------LQR----LFTPSLAQRYEQLYQQNGVKFV 267 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~----~~~~------------l~~----~~~~~~~~~l~~~l~~~Gv~~~ 267 (489)
.+++|||+|+.|+.+|..|++.|.+|+++++ ...+ .+. .....+...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5799999999999999999999999999998 2211 010 1234677778888889999999
Q ss_pred EcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 268 KVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 268 ~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
. ++ ++.+...++ .+ .|.+ +|+++.+|.+|+|+|.+|...
T Consensus 89 ~-~~-v~~i~~~~~-~~-~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 89 T-ET-VTKVDFSSK-PF-KLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp C-CC-CCEEECSSS-SE-EEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred E-eE-EEEEEEcCC-EE-EEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 8 76 888875432 22 4566 777899999999999987643
No 181
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.35 E-value=5.9e-07 Score=89.47 Aligned_cols=120 Identities=16% Similarity=0.198 Sum_probs=71.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC---CCCCCC-Cccc---cC-----C----------------
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA---PYERPA-LTKG---YL-----F---------------- 102 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~---~y~~~~-l~~~---~~-----~---------------- 102 (489)
++||+|||||++|+++|..|++.|. +|+|+|+.+.. .-.+.. ++.. .+ .
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGI---DNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 4799999999999999999999987 69999987631 000000 0000 00 0
Q ss_pred CCCCCCCCCCCCcccc-CCCC--------CCCChhHHHHCCcEEEeCCcEEEEeCCC---CEEEe-CCCe--EEeeCcEE
Q 011267 103 PLDKKPARLPGFHTCV-GSGG--------ERQTPEWYKEKGIEMIYQDPVTSIDIEK---QTLIT-NSGK--LLKYGSLI 167 (489)
Q Consensus 103 ~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~i~~~~~~~V~~id~~~---~~v~~-~~g~--~i~yd~lv 167 (489)
.... ...+ .+.... +... ...+.+.+.+.+++++.+++|+++..+. ..|++ .+|. ++.+|.||
T Consensus 79 ~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV 156 (394)
T 1k0i_A 79 FAGQ-RRRI-DLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIA 156 (394)
T ss_dssp ETTE-EEEE-CHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEE
T ss_pred ECCc-eEEe-ccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEE
Confidence 0000 0000 000000 0000 0011222345699999999999997642 36666 6887 79999999
Q ss_pred ecCCCCCC
Q 011267 168 VATGCTAS 175 (489)
Q Consensus 168 lATG~~~~ 175 (489)
.|+|....
T Consensus 157 ~AdG~~S~ 164 (394)
T 1k0i_A 157 GCDGFHGI 164 (394)
T ss_dssp ECCCTTCS
T ss_pred ECCCCCcH
Confidence 99998754
No 182
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.35 E-value=2e-06 Score=82.51 Aligned_cols=99 Identities=16% Similarity=0.312 Sum_probs=76.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-cEEEEccCCc---c--------hhh----hhCHHHHHHHHHHHHhcCcEEEEcCce
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH---L--------LQR----LFTPSLAQRYEQLYQQNGVKFVKVGAS 272 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~-~V~lv~~~~~---~--------l~~----~~~~~~~~~l~~~l~~~Gv~~~~~~~~ 272 (489)
+++|||+|+.|+.+|..|++.|. +|+++++... + .+. .....+.+.+.+.+++.|++++. .+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~--~~ 80 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM--TA 80 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC--SC
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE--EE
Confidence 68999999999999999999999 9999998521 0 111 11246777788888899999987 68
Q ss_pred EEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
|+.+...+ +. ..+.+.+|+++.+|.+|+|+|..|...
T Consensus 81 v~~i~~~~-~~-~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 81 VQRVSKKD-SH-FVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp EEEEEEET-TE-EEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred EEEEEEcC-CE-EEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 88887543 22 346678888999999999999887643
No 183
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=5.4e-07 Score=88.96 Aligned_cols=99 Identities=23% Similarity=0.318 Sum_probs=73.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch------hhh----hC-HHHHHHHHHHHHhcCcEEEEcCceEE
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL------QRL----FT-PSLAQRYEQLYQQNGVKFVKVGASIK 274 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l------~~~----~~-~~~~~~l~~~l~~~Gv~~~~~~~~v~ 274 (489)
.+.+++|||+|+.|+.+|..|++.| +|+++++.+.+. +.. .+ .++.....+.+++.||+++. ++.|+
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-g~~v~ 84 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRL-AEEAK 84 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEEC-SCCEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEE-CCEEE
Confidence 4789999999999999999999999 999999886421 110 01 11112234567788999999 99999
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 275 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
.+... .+ .|. .+|+++.+|.+|+|||.+|...
T Consensus 85 ~id~~--~~--~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 85 LIDRG--RK--VVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EEETT--TT--EEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EEECC--CC--EEE-ECCcEEECCEEEECCCCCCCCC
Confidence 99743 23 344 6778899999999999988743
No 184
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.34 E-value=4e-06 Score=83.06 Aligned_cols=98 Identities=20% Similarity=0.295 Sum_probs=72.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh----------h---------------------------------
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------R--------------------------------- 245 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~----------~--------------------------------- 245 (489)
.|+|||||+.|+-+|..|++.|.+|+++++.+.+.. +
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 589999999999999999999999999997632200 0
Q ss_pred ------------hh-CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC-CC--cEEEcCEEEEccCCCC
Q 011267 246 ------------LF-TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE-DG--STIDADTIVIGIGAKP 308 (489)
Q Consensus 246 ------------~~-~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~aD~vi~a~G~~p 308 (489)
.+ -..+...+.+..++.|+++++ +++++.+..+ ++.+..+... ++ .++.||.||-|.|...
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~-~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWV-KSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEES-SCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEee-eeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 00 123456677778889999999 9999998754 4555444432 33 3689999999999643
No 185
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.32 E-value=3.2e-06 Score=84.26 Aligned_cols=100 Identities=15% Similarity=0.133 Sum_probs=79.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch----------------hh--------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL----------------QR-------------------------- 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l----------------~~-------------------------- 245 (489)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. ..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 479999999999999999999999999999864320 00
Q ss_pred -----------------hhCHHHHHHHHHHHHhc-CcEEEEcCceEEEEEeCCCCcEE-EEEeCCCcEEEcCEEEEccCC
Q 011267 246 -----------------LFTPSLAQRYEQLYQQN-GVKFVKVGASIKNLEAGSDGRVA-AVKLEDGSTIDADTIVIGIGA 306 (489)
Q Consensus 246 -----------------~~~~~~~~~l~~~l~~~-Gv~~~~~~~~v~~i~~~~~~~v~-~v~~~~g~~i~aD~vi~a~G~ 306 (489)
.....+.+.+.+.+++. |+++++ +++|++++.+++ .+. .|++.+|+++.+|.||.|+|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~-~~~v~~i~~~~~-~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLF-ETRIEAVQRDER-HAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEEC-SCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECCCT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEc-CCEEEEEEEcCC-ceEEEEEECCCCEEECCEEEECCCC
Confidence 00124566677777777 999999 999999986544 442 578889989999999999998
Q ss_pred CCC
Q 011267 307 KPT 309 (489)
Q Consensus 307 ~p~ 309 (489)
.+.
T Consensus 165 ~s~ 167 (399)
T 2x3n_A 165 ASY 167 (399)
T ss_dssp TCH
T ss_pred ChH
Confidence 764
No 186
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.32 E-value=3.4e-07 Score=92.43 Aligned_cols=98 Identities=22% Similarity=0.314 Sum_probs=74.5
Q ss_pred CcEEEECCCHHHHHHHHHHHh--CCCcEEEEccCCcchhhhh----------CHHHHHHHHHHHHhcCcEEEEcCceEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHLLQRLF----------TPSLAQRYEQLYQQNGVKFVKVGASIKN 275 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~--~g~~V~lv~~~~~~l~~~~----------~~~~~~~l~~~l~~~Gv~~~~~~~~v~~ 275 (489)
++|+|||||+.|+.+|..|++ .+.+|+++++.+.+..... ..++...+.+.+++.|++++. + .++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~-~-~v~~ 80 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFIN-E-KAES 80 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEEC-S-CEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEE-E-EEEE
Confidence 589999999999999999999 7899999999876532110 111112234556778999987 4 8999
Q ss_pred EEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 276 LEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 276 i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
++.+ .+ .|.+++|+++.+|.+|+|+|.+|+.+
T Consensus 81 id~~--~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 81 IDPD--AN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp EETT--TT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred EECC--CC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 9743 22 47788898999999999999988644
No 187
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.32 E-value=2.4e-06 Score=88.33 Aligned_cols=103 Identities=21% Similarity=0.277 Sum_probs=80.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC--cch-----------hhhhCHHHHHHHHHHHHhcCcEEEEcCceE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL-----------QRLFTPSLAQRYEQLYQQNGVKFVKVGASI 273 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~--~~l-----------~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v 273 (489)
..+++|||||+.|+.+|..|++.|.+|+++++.. .+. +....+.+...+.+.+++.|++++. +++|
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~-~~~v 290 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVID-SQSA 290 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEEC-SCCE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEc-CCEE
Confidence 4579999999999999999999999999997531 111 0112356778888889999999999 9999
Q ss_pred EEEEeCCC-CcEEEEEeCCCcEEEcCEEEEccCCCCCC
Q 011267 274 KNLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPTV 310 (489)
Q Consensus 274 ~~i~~~~~-~~v~~v~~~~g~~i~aD~vi~a~G~~p~~ 310 (489)
+.+....+ +....|.+++|+++.+|.||+|+|.+|..
T Consensus 291 ~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 291 SKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 99974321 22346788899899999999999988753
No 188
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.32 E-value=9.2e-07 Score=87.25 Aligned_cols=45 Identities=29% Similarity=0.409 Sum_probs=35.4
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCC
Q 011267 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTA 174 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~ 174 (489)
.+.+.|++++.+++|+++..+.. .+.+.+|. +.+|++|+|+|...
T Consensus 158 ~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 158 LAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGG
T ss_pred HHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccH
Confidence 34567999999999999986543 56666665 99999999999754
No 189
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.31 E-value=1.4e-06 Score=87.99 Aligned_cols=102 Identities=24% Similarity=0.426 Sum_probs=76.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--cEEEEccCCcch------hh-hhC-----HHHHHHHHHHHHhcCcEEEEcCce
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLL------QR-LFT-----PSLAQRYEQLYQQNGVKFVKVGAS 272 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~--~V~lv~~~~~~l------~~-~~~-----~~~~~~l~~~l~~~Gv~~~~~~~~ 272 (489)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+. .. .+. ..+.....+.+++.||+++. ++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~-~~~ 82 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLG-GTQ 82 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEEC-SCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEe-CCE
Confidence 4689999999999999999999998 799999875421 10 000 01111123567788999999 999
Q ss_pred EEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchh
Q 011267 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPF 313 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~ 313 (489)
|+.+... ++ .|.+++|+++.+|.+|+|+|.+|....+
T Consensus 83 v~~i~~~--~~--~v~~~~g~~~~~d~lviAtG~~p~~~~i 119 (431)
T 1q1r_A 83 VTAINRD--RQ--QVILSDGRALDYDRLVLATGGRPRPLPV 119 (431)
T ss_dssp EEEEETT--TT--EEEETTSCEEECSEEEECCCEEECCCGG
T ss_pred EEEEECC--CC--EEEECCCCEEECCEEEEcCCCCccCCCC
Confidence 9999843 22 4777888899999999999999875543
No 190
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.30 E-value=2.2e-06 Score=85.94 Aligned_cols=99 Identities=24% Similarity=0.427 Sum_probs=75.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCc--EEEEccCCcchhh--hhCHHHH---------HHHHHHHHhcCcEEEEcCceEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLD--TTIIFPENHLLQR--LFTPSLA---------QRYEQLYQQNGVKFVKVGASIK 274 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~--V~lv~~~~~~l~~--~~~~~~~---------~~l~~~l~~~Gv~~~~~~~~v~ 274 (489)
++++|||+|+.|+.+|..|++.|.+ |+++++.+.+.-. .+...+. ....+.+++.|++++. +++++
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~-~~~v~ 81 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLT-GPEVT 81 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEE-SCCEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEe-CCEEE
Confidence 4799999999999999999999987 9999987643110 0111111 1223456778999999 99999
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 275 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
.+... .+ .|.+.+|+++.+|.+|+|||.+|...
T Consensus 82 ~id~~--~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 82 ALDVQ--TR--TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EEETT--TT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEECC--CC--EEEECCCCEEECCEEEEccCCcccCC
Confidence 99843 22 57788999999999999999987643
No 191
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.29 E-value=1.7e-06 Score=90.23 Aligned_cols=68 Identities=18% Similarity=0.137 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCC---C--cEEEcCEEEEccCCCCCCchhhhcCC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLED---G--STIDADTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~aD~vi~a~G~~p~~~~~~~~gl 318 (489)
+..+...+.+.+++.|+++++ +++|+++..+ ++++.+|++.+ | .++.||.||.|+|.... .+++..|.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~-~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~-~l~~~~g~ 241 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALN-YMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVD-TLREKDRS 241 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-SEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHH-HHHHTTTC
T ss_pred HHHHHHHHHHHHHHcCCEEEc-CCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcchH-HHHHhcCC
Confidence 346677778888899999999 9999999864 56666777654 3 47999999999998653 44444443
No 192
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.28 E-value=3.4e-06 Score=80.99 Aligned_cols=100 Identities=15% Similarity=0.184 Sum_probs=76.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc--------ch------------hhhhCHHHHHHHHHHHHhcCcEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH--------LL------------QRLFTPSLAQRYEQLYQQNGVKFV 267 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~--------~l------------~~~~~~~~~~~l~~~l~~~Gv~~~ 267 (489)
..|+|||+|+.|+.+|..++++|.+|+++++... +. .....+++.+.+.+.+++.++++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII 84 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEE
Confidence 4699999999999999999999999999987531 00 011235677888888999999987
Q ss_pred EcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 268 KVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 268 ~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
. ..+.......+. ..+.+.+++++.+|.+|+|||.+|...
T Consensus 85 ~--~~v~~~~~~~~~--~~~~~~~~~~~~~~~liiATG~~~~~~ 124 (314)
T 4a5l_A 85 T--ETIDHVDFSTQP--FKLFTEEGKEVLTKSVIIATGATAKRM 124 (314)
T ss_dssp C--CCEEEEECSSSS--EEEEETTCCEEEEEEEEECCCEEECCC
T ss_pred E--eEEEEeecCCCc--eEEEECCCeEEEEeEEEEccccccccc
Confidence 6 456665533322 356778888999999999999988643
No 193
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.28 E-value=1.7e-06 Score=86.66 Aligned_cols=97 Identities=20% Similarity=0.334 Sum_probs=75.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++|+|||||+.|+.+|..|++.|. +|+++++.+... + . .+ + ..+ .....+.
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~---~-~~-~-----~~~-----------~~~l~~~ 196 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGV---HVSLVETQPRLM---S---R-AA-P-----ATL-----------ADFVARY 196 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---T---T-TS-C-----HHH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCC---EEEEEEeCCccc---c---c-cc-C-----HHH-----------HHHHHHH
Confidence 35799999999999999999999875 799999876421 0 0 00 0 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
+++.|++++.+++|.+++ ++ .+.+.+|+++++|.+|+|+|..|.
T Consensus 197 l~~~GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 197 HAAQGVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHHTTCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHcCcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCCcc
Confidence 778999999999999998 44 888899999999999999998765
No 194
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.27 E-value=6.5e-07 Score=83.61 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=33.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
|..||+|||||||||+||..|+++|+ +|+|+|+.+.+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~---~V~v~Ek~~~~ 37 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGS 37 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCC
Confidence 34799999999999999999999988 69999998764
No 195
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.26 E-value=3.4e-06 Score=81.24 Aligned_cols=99 Identities=19% Similarity=0.272 Sum_probs=75.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC---cc--------hhh----hhCHHHHHHHHHHHHhcCcEEEEcCce
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN---HL--------LQR----LFTPSLAQRYEQLYQQNGVKFVKVGAS 272 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~---~~--------l~~----~~~~~~~~~l~~~l~~~Gv~~~~~~~~ 272 (489)
.+++|||+|+.|+.+|..|++.|.+|+++++.. .+ .+. ...+.+.+.+.+.+++.|++++. ++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 83 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIF-DH- 83 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEEC-CC-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE-ee-
Confidence 579999999999999999999999999998641 00 011 12356777788888899999998 75
Q ss_pred EEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
++.+...+ +.+ .+ +.+++++.+|.+|+|+|..|...
T Consensus 84 v~~i~~~~-~~~-~v-~~~~~~~~~~~lv~AtG~~~~~~ 119 (320)
T 1trb_A 84 INKVDLQN-RPF-RL-NGDNGEYTCDALIIATGASARYL 119 (320)
T ss_dssp EEEEECSS-SSE-EE-EESSCEEEEEEEEECCCEEECCC
T ss_pred eeEEEecC-CEE-EE-EeCCCEEEcCEEEECCCCCcCCC
Confidence 88887543 332 34 56778899999999999987643
No 196
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.26 E-value=2.7e-06 Score=82.68 Aligned_cols=100 Identities=19% Similarity=0.293 Sum_probs=77.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC---cc--------hhh----hhCHHHHHHHHHHHHhcCcEEEEcCc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN---HL--------LQR----LFTPSLAQRYEQLYQQNGVKFVKVGA 271 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~---~~--------l~~----~~~~~~~~~l~~~l~~~Gv~~~~~~~ 271 (489)
..+++|||+|+.|+.+|..|++.|.+|+++++.. .+ .+. ...+.+.+.+.+.+++.|++++. ++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~ 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRM-ED 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEEC-CC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEE-ee
Confidence 4679999999999999999999999999998541 00 111 11256777788888889999998 76
Q ss_pred eEEEEEeCCCCcEEEE-EeCCCcEEEcCEEEEccCCCCCCc
Q 011267 272 SIKNLEAGSDGRVAAV-KLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 272 ~v~~i~~~~~~~v~~v-~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
++.+.. ++.. .| .+.+|+++.+|.+|+|+|..|...
T Consensus 93 -v~~i~~--~~~~-~v~~~~~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 93 -VESVSL--HGPL-KSVVTADGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp -EEEEEC--SSSS-EEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred -EEEEEe--CCcE-EEEEeCCCCEEEeCEEEECCCCCccCC
Confidence 888875 2222 35 677888999999999999987643
No 197
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.25 E-value=1.6e-06 Score=86.17 Aligned_cols=98 Identities=13% Similarity=0.174 Sum_probs=74.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
.++++|||+|+.|+.+|..|++.|. +|+++++.+...-. .+ ...+ .....+.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~~~~-------~~------~~~~-----------~~~l~~~l 197 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGY---QLDVVAPCEQVMPG-------LL------HPAA-----------AKAVQAGL 197 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSSTT-------TS------CHHH-----------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCcchhhc-------cc------CHHH-----------HHHHHHHH
Confidence 6789999999999999999999876 79999987542100 00 0000 01234566
Q ss_pred HHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
++.|++++.+++|.+++.+.. .+.+.+|+++.+|.+|+|+|..|.
T Consensus 198 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 198 EGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp HTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 778999999999999976443 677888989999999999998775
No 198
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.25 E-value=7e-06 Score=85.43 Aligned_cols=100 Identities=17% Similarity=0.295 Sum_probs=77.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc-c-----------------hh----------hh------------
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-L-----------------LQ----------RL------------ 246 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~-----------------l~----------~~------------ 246 (489)
...|+|||||..|+++|..+++.|.+|.++++... + .. ..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 35799999999999999999999999999997631 0 00 00
Q ss_pred -------------hC-HHHHHHHHHHHHh-cCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 247 -------------FT-PSLAQRYEQLYQQ-NGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 247 -------------~~-~~~~~~l~~~l~~-~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
.+ ..+...+.+.+++ .|++++ ++.|+++.. +++++.+|.+.+|+++.||.||+|+|..++
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~--~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK--QEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE--ESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE--EeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 00 1345666777777 599994 579999875 356777899999999999999999998754
No 199
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.24 E-value=3.3e-06 Score=83.53 Aligned_cols=64 Identities=17% Similarity=0.306 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCC
Q 011267 250 SLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 250 ~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl 318 (489)
.+...+.+.+++.|+++++ ++.|+++... ++.+ .|.+.+| ++.||.||+|+|.... .++..+++
T Consensus 165 ~~~~~l~~~~~~~g~~i~~-~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~-~l~~~~~~ 228 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFE-HTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG-MFFKQLGL 228 (382)
T ss_dssp HHHHHHHHHHHHTTCEEET-TCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH-HHHHHTTC
T ss_pred HHHHHHHHHHHHCCCEEEc-CCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH-HHHHhcCC
Confidence 4556677888889999999 9999999854 3455 6777777 8999999999998754 45555543
No 200
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.24 E-value=2.4e-06 Score=85.73 Aligned_cols=100 Identities=26% Similarity=0.398 Sum_probs=76.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCc--EEEEccCCcc------hh-hhh-----CHHHHHHHHHHHHhcCcEEEEcCce
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLD--TTIIFPENHL------LQ-RLF-----TPSLAQRYEQLYQQNGVKFVKVGAS 272 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~--V~lv~~~~~~------l~-~~~-----~~~~~~~l~~~l~~~Gv~~~~~~~~ 272 (489)
..+++|||+|+.|+.+|..|++.|.+ |+++++.+.+ +. ..+ ...+.....+.+++.|++++. +++
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~ 87 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKL-GAE 87 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEE-TCC
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEe-CCE
Confidence 46899999999999999999999987 9999987542 11 111 112222345667789999999 999
Q ss_pred EEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
++.+... .+ .|.+.+|+++.+|.+|+|||.+|...
T Consensus 88 v~~id~~--~~--~v~~~~g~~~~~d~lvlAtG~~~~~~ 122 (415)
T 3lxd_A 88 VVSLDPA--AH--TVKLGDGSAIEYGKLIWATGGDPRRL 122 (415)
T ss_dssp EEEEETT--TT--EEEETTSCEEEEEEEEECCCEECCCC
T ss_pred EEEEECC--CC--EEEECCCCEEEeeEEEEccCCccCCC
Confidence 9999743 33 47788999999999999999988754
No 201
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.23 E-value=3.7e-06 Score=85.29 Aligned_cols=102 Identities=18% Similarity=0.174 Sum_probs=76.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC--cEEEEccCCcch----hh---------------------------------h
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLL----QR---------------------------------L 246 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~--~V~lv~~~~~~l----~~---------------------------------~ 246 (489)
...+|+|||+|+.|+.+|..|++.|. +|+++++.+.+. .. .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35789999999999999999999999 999999874220 00 0
Q ss_pred --------------h--------------CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCC---Cc--
Q 011267 247 --------------F--------------TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLED---GS-- 293 (489)
Q Consensus 247 --------------~--------------~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~---g~-- 293 (489)
+ ...+.+++.+..++.++.+++ +++|+++...+++ ..|++.+ |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~-~t~V~~v~~~~~~--~~V~~~~~~~G~~~ 161 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKL-ATDVLDIEKKDGS--WVVTYKGTKAGSPI 161 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEEC-SEEEEEEEEETTE--EEEEEEESSTTCCE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEe-CCEEEEEEeCCCe--EEEEEeecCCCCee
Confidence 0 124566777777777888999 9999999864332 2455554 66
Q ss_pred -EEEcCEEEEccCC--CCCC
Q 011267 294 -TIDADTIVIGIGA--KPTV 310 (489)
Q Consensus 294 -~i~aD~vi~a~G~--~p~~ 310 (489)
++.+|.||+|+|. .|+.
T Consensus 162 ~~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 162 SKDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEEEESEEEECCCSSSSBCB
T ss_pred EEEEeCEEEECCCCCCCCCC
Confidence 7999999999998 6654
No 202
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.23 E-value=5.1e-06 Score=82.63 Aligned_cols=101 Identities=19% Similarity=0.205 Sum_probs=77.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc------------------hhh------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL------------------LQR------------------------ 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~------------------l~~------------------------ 245 (489)
.+|+|||||+.|+.+|..|++.|.+|+++++.+.. +.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999987531 000
Q ss_pred --h--------------hC-HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe-CCCc--EEEcCEEEEccC
Q 011267 246 --L--------------FT-PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIG 305 (489)
Q Consensus 246 --~--------------~~-~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~-~~g~--~i~aD~vi~a~G 305 (489)
. ++ ..+.+.+.+.+.+.|+++++ +++|+++..++++.+ .|++ .+|+ ++.+|.||.|.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~-~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVY-QAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDG 160 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEES-SCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCC
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEe-ceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCC
Confidence 0 01 23455666777778999999 999999985433333 4666 6886 799999999999
Q ss_pred CCCCC
Q 011267 306 AKPTV 310 (489)
Q Consensus 306 ~~p~~ 310 (489)
.....
T Consensus 161 ~~S~v 165 (394)
T 1k0i_A 161 FHGIS 165 (394)
T ss_dssp TTCST
T ss_pred CCcHH
Confidence 97754
No 203
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.22 E-value=7e-06 Score=85.73 Aligned_cols=99 Identities=19% Similarity=0.278 Sum_probs=77.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc-c---------------------------hhh--------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-L---------------------------LQR-------------- 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~---------------------------l~~-------------- 245 (489)
..|+|||||..|+++|..+++.|.+|.++++... + +..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 4799999999999999999999999999997631 0 000
Q ss_pred -----------hhC-HHHHHHHHHHHHh-cCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 246 -----------LFT-PSLAQRYEQLYQQ-NGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 246 -----------~~~-~~~~~~l~~~l~~-~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
..+ ..+...+.+.+++ .|++++ ++.|+++.. +++++.+|.+.+|.++.||.||+|+|..+.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~--~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF--QQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE--ECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE--EEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 001 1355667777877 699994 579999975 356777899999988999999999998754
No 204
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.22 E-value=2.1e-06 Score=85.84 Aligned_cols=98 Identities=26% Similarity=0.468 Sum_probs=74.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--cEEEEccCCcc------hh-hhh-----CHHHHHHHHHHHHhcCcEEEEcCceE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHL------LQ-RLF-----TPSLAQRYEQLYQQNGVKFVKVGASI 273 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~--~V~lv~~~~~~------l~-~~~-----~~~~~~~l~~~l~~~Gv~~~~~~~~v 273 (489)
++++|||+|+.|+.+|..|++.|. +|+++++.+.+ +. ..+ ...+.....+.+++.|++++. +++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~--~~v 79 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS--DRM 79 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC--CCE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE--EEE
Confidence 689999999999999999999998 89999987632 11 000 111222344667788999987 889
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 274 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 274 ~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
+.+... .+ .+.+.+|+++.+|.+|+|||.+|...
T Consensus 80 ~~id~~--~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 113 (404)
T 3fg2_P 80 VSIDRE--GR--KLLLASGTAIEYGHLVLATGARNRML 113 (404)
T ss_dssp EEEETT--TT--EEEESSSCEEECSEEEECCCEEECCC
T ss_pred EEEECC--CC--EEEECCCCEEECCEEEEeeCCCccCC
Confidence 999743 33 47788999999999999999987643
No 205
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.22 E-value=1e-05 Score=78.47 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=70.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh-------------------hhCHHHHHHH-------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------------------LFTPSLAQRY------------- 255 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-------------------~~~~~~~~~l------------- 255 (489)
.+|+|||||++|+.+|..|++.|.+|+++++.+.+..+ ...+.+.+.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 47999999999999999999999999999987533110 0012222222
Q ss_pred ------------------------------HHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEE-cCEEEEcc
Q 011267 256 ------------------------------EQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTID-ADTIVIGI 304 (489)
Q Consensus 256 ------------------------------~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~-aD~vi~a~ 304 (489)
.+.+. .|+++++ +++|++++.++++ + .|.+.+|+.+. +|.||.|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~-~~~v~~i~~~~~~-~-~v~~~~g~~~~~a~~vV~a~ 158 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSF-SCRITEVFRGEEH-W-NLLDAEGQNHGPFSHVIIAT 158 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEEC-SCCEEEEEECSSC-E-EEEETTSCEEEEESEEEECS
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEe-cCEEEEEEEeCCE-E-EEEeCCCcCccccCEEEEcC
Confidence 22222 2889999 9999999876544 3 47788888764 99999999
Q ss_pred CCCC
Q 011267 305 GAKP 308 (489)
Q Consensus 305 G~~p 308 (489)
|...
T Consensus 159 g~~~ 162 (336)
T 1yvv_A 159 PAPQ 162 (336)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 9753
No 206
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.22 E-value=1.9e-06 Score=87.73 Aligned_cols=99 Identities=21% Similarity=0.277 Sum_probs=75.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 216 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFGS---EVTVVALEDRLL---FQFDP-----------LL-----------SATLAEN 216 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcCC---EEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35689999999999999999999876 799999875421 00000 00 0123566
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--CEEEeCCCe-EEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGK-LLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~--~~v~~~~g~-~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++.+++|.+++.+. ..+.+.+|+ ++.+|.+++|+|..|..
T Consensus 217 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 217 MHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred HHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 788999999999999998643 467788998 89999999999988763
No 207
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.22 E-value=2.1e-06 Score=87.23 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=75.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+.. .+ .....+.
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 217 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGA---KTHLFEMFDAPL---PSFDP-----------MI-----------SETLVEV 217 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCC---EEEEEEeCCchh---hhhhH-----------HH-----------HHHHHHH
Confidence 35789999999999999999999875 799999875421 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC---CEEEeCCCeEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~---~~v~~~~g~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++.+++|.+++.+. ..+.+.+|+++.+|.+|+|+|..|..
T Consensus 218 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 218 MNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp HHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 778899999999999998643 36788899889999999999988763
No 208
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.21 E-value=1.4e-06 Score=88.67 Aligned_cols=97 Identities=22% Similarity=0.305 Sum_probs=72.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||++|+.+|..|++.|. +|+|+++.+... |.+.. .+ .....+.
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 221 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGA---QVSVVEARERIL---PTYDS-----------EL-----------TAPVAES 221 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35789999999999999999999976 799999876421 10000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEEEeC--CC--eEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTLITN--SG--KLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v~~~--~g--~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++++++|.+++. .. +.+. +| .++.+|.+++|||.+|..
T Consensus 222 l~~~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 222 LKKLGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred HHHCCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCC
Confidence 7788999999999999997 43 4333 56 679999999999988763
No 209
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.21 E-value=4.7e-06 Score=83.10 Aligned_cols=100 Identities=17% Similarity=0.278 Sum_probs=73.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh-----hhCHHHHH----------------------------
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----LFTPSLAQ---------------------------- 253 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-----~~~~~~~~---------------------------- 253 (489)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... .+.+...+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987643110 01222111
Q ss_pred ---------------HHHHHHHh--cCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 254 ---------------RYEQLYQQ--NGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 254 ---------------~l~~~l~~--~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
.+.+.|.+ .|+++++ +++|++++.+++ .+ .|++.+|+++.+|.||.|.|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~-~~~v~~i~~~~~-~v-~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHT-SKCLVGLSQDSE-TV-QMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEET-TCCEEEEEECSS-CE-EEEETTSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEc-CCEEEEEEecCC-EE-EEEECCCCEEECCEEEECCCcchh
Confidence 12222222 3789999 999999986544 34 588899999999999999998764
No 210
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.20 E-value=3e-06 Score=85.95 Aligned_cols=98 Identities=17% Similarity=0.250 Sum_probs=73.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||++|+.+|..|++.|. +|+++++.+...-. ++ + ..+ .....+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~~-------~~-~-----~~~-----------~~~l~~~ 200 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGK---KVTVIDILDRPLGV-------YL-D-----KEF-----------TDVLTEE 200 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTTT-------TC-C-----HHH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---eEEEEecCcccccc-------cC-C-----HHH-----------HHHHHHH
Confidence 46899999999999999999999875 79999987642100 00 0 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
+++.|++++.+++|.+++.+.+ .+.+ ++.++.+|.+|+|+|..|.
T Consensus 201 l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 201 MEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred HHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 6788999999999999987643 3555 5667999999999998875
No 211
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.20 E-value=2.8e-06 Score=86.47 Aligned_cols=103 Identities=14% Similarity=0.159 Sum_probs=77.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC-----CcEEEEccCCcch--h------------------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWK-----LDTTIIFPENHLL--Q------------------------------------ 244 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g-----~~V~lv~~~~~~l--~------------------------------------ 244 (489)
.+|+|||+|+.|+.+|..|++.| .+|+++++.+.+. +
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~ 110 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKH 110 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHT
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhc
Confidence 37999999999999999999999 9999999876311 0
Q ss_pred ----------hh--hCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCC-CcE--EEEEeCCCc----EEEcCEEEEccC
Q 011267 245 ----------RL--FTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSD-GRV--AAVKLEDGS----TIDADTIVIGIG 305 (489)
Q Consensus 245 ----------~~--~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~-~~v--~~v~~~~g~----~i~aD~vi~a~G 305 (489)
.. ....+.+++....++.|+++++ +++|++++..++ ++. ..|.+.+|+ ++.+|.||+|+|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~-~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG 189 (463)
T 3s5w_A 111 DRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRY-GEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPG 189 (463)
T ss_dssp TCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEE-SEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCC
T ss_pred CceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEe-CCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCC
Confidence 00 0134555666666777999999 999999986421 232 256666665 899999999999
Q ss_pred CCCCCc
Q 011267 306 AKPTVS 311 (489)
Q Consensus 306 ~~p~~~ 311 (489)
..|..+
T Consensus 190 ~~p~~p 195 (463)
T 3s5w_A 190 GTPRIP 195 (463)
T ss_dssp CEECCC
T ss_pred CCCCCc
Confidence 988754
No 212
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.19 E-value=1.8e-05 Score=82.23 Aligned_cols=99 Identities=14% Similarity=0.176 Sum_probs=75.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch--------hh------------hh----------------CHHH
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL--------QR------------LF----------------TPSL 251 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l--------~~------------~~----------------~~~~ 251 (489)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +. .+ .+++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999875320 00 00 1345
Q ss_pred HHHHHHHHHhcC--cEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 252 AQRYEQLYQQNG--VKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 252 ~~~l~~~l~~~G--v~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
.+++....++.+ +++++ +++|+++..++++....|.+++|+++.||.||+|+|..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~-~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITF-HTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHTTGGGGEEC-SCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCCceEEc-CcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 556666666665 67888 99999998765544456888899899999999999963
No 213
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.18 E-value=6.8e-06 Score=78.72 Aligned_cols=99 Identities=17% Similarity=0.244 Sum_probs=74.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEE-EccCCcc------------hhh----hhCHHHHHHHHHHHHhcCcEEEEc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTI-IFPENHL------------LQR----LFTPSLAQRYEQLYQQNGVKFVKV 269 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~l-v~~~~~~------------l~~----~~~~~~~~~l~~~l~~~Gv~~~~~ 269 (489)
..+|+|||+|+.|+.+|..|++.|.+|++ +++. .+ .+. ....++...+.+.+++.|++++.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~- 81 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEM- 81 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEEC-
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEE-
Confidence 45899999999999999999999999999 8873 21 111 11257788888999999999998
Q ss_pred CceEEEEEeCCC-CcEEEEEe-CCCcEEEcCEEEEccCCCCCCc
Q 011267 270 GASIKNLEAGSD-GRVAAVKL-EDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 270 ~~~v~~i~~~~~-~~v~~v~~-~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
+ ++.++ .+++ +.. .+.+ .++ ++.+|.+|+|+|..|+..
T Consensus 82 ~-~v~~i-~~~~~~~~-~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 82 V-GVEQI-LKNSDGSF-TIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp C-CEEEE-EECTTSCE-EEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred E-EEEEE-ecCCCCcE-EEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 7 88888 4431 222 3313 334 899999999999987643
No 214
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.17 E-value=2.3e-06 Score=87.21 Aligned_cols=98 Identities=12% Similarity=0.219 Sum_probs=73.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
.++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+. ..+ .....+.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~-----------~~~-----------~~~l~~~l 220 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGA---EVTLIEYMPEIL---PQGD-----------PET-----------AALLRRAL 220 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSC-----------HHH-----------HHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---eEEEEEcCCccc---cccC-----------HHH-----------HHHHHHHH
Confidence 4789999999999999999999875 799999875421 0000 000 01234567
Q ss_pred HHCCcEEEeCCcEEEEeCCCC--EEEeC-C--Ce--EEeeCcEEecCCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDIEKQ--TLITN-S--GK--LLKYGSLIVATGCTASR 176 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~~--~v~~~-~--g~--~i~yd~lvlATG~~~~~ 176 (489)
++.|++++.+++|.+++.+.. .+.+. + |+ ++.+|.+++|+|..|..
T Consensus 221 ~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 221 EKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred HhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 788999999999999986543 45554 5 76 79999999999988763
No 215
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.17 E-value=3.9e-06 Score=85.22 Aligned_cols=101 Identities=14% Similarity=0.244 Sum_probs=72.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcch------hhhhCH------HHHHHHHHHHHhcCcEEEEcCceE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL------QRLFTP------SLAQRYEQLYQQNGVKFVKVGASI 273 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~l------~~~~~~------~~~~~l~~~l~~~Gv~~~~~~~~v 273 (489)
++++|||+|+.|+.+|..|++. +.+|+++++.+.+. +..... .+.....+.+++.|++++. +++|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~-~~~V 81 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLL-NREV 81 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEEC-SCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEE-CCEE
Confidence 5899999999999999999998 89999999887542 100111 1111144667889999999 9999
Q ss_pred EEEEeCCCCcEEEEE-eCCCcEEEcCEEEEccCCCCCCc
Q 011267 274 KNLEAGSDGRVAAVK-LEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 274 ~~i~~~~~~~v~~v~-~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
+++... +..+ .+. ..+++++.+|.+|+|+|.+|...
T Consensus 82 ~~id~~-~~~v-~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 82 VAMDVE-NQLI-AWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEEETT-TTEE-EEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEEECC-CCEE-EEEecCceEEEEcCEEEECCCcccCCC
Confidence 999843 2322 333 23456899999999999998754
No 216
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.16 E-value=5.3e-06 Score=83.83 Aligned_cols=95 Identities=15% Similarity=0.283 Sum_probs=74.9
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
..+++|||||+.|+.+|..+++.|. +|+|+++.+... + ..+. .+ .....+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~ll---~--------~~d~---~~-----------~~~~~~~l 198 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGL---HPTLIHRSDKIN---K--------LMDA---DM-----------NQPILDEL 198 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC---EEEEEESSSCCS---T--------TSCG---GG-----------GHHHHHHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCC---cceeeeeecccc---c--------cccc---hh-----------HHHHHHHh
Confidence 5689999999999999999999976 799999875421 0 0000 00 12345677
Q ss_pred HHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
++.+++++++++|.+++. ..+.+.+|+++++|.+++|+|..|.
T Consensus 199 ~~~gV~i~~~~~v~~~~~--~~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 199 DKREIPYRLNEEINAING--NEITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp HHTTCCEEESCCEEEEET--TEEEETTSCEEECSEEEECCCEEES
T ss_pred hccceEEEeccEEEEecC--CeeeecCCeEEeeeeEEEEeceecC
Confidence 889999999999998875 5688999999999999999998875
No 217
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.16 E-value=9.4e-06 Score=83.51 Aligned_cols=35 Identities=17% Similarity=0.459 Sum_probs=31.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+.+||+|||||++|+++|+.|+++|. +|+|+|++.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~---~V~llE~~~ 36 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGL---SVLMLEAQD 36 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---CEEEEECCC
Confidence 46899999999999999999999987 699999975
No 218
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.16 E-value=2.7e-06 Score=84.88 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=31.8
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
.+|+||||||+|+++|..|+++|+ +|+|+|+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~---~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGI---KVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC---CEEEEecCCCC
Confidence 479999999999999999999987 79999987654
No 219
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.15 E-value=1.3e-05 Score=83.69 Aligned_cols=101 Identities=18% Similarity=0.303 Sum_probs=77.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc-c-----------------h------hh----------------
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-L-----------------L------QR---------------- 245 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~-----------------l------~~---------------- 245 (489)
....|+|||||..|+++|..+++.|.+|.++++... + + ..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 345899999999999999999999999999997631 0 0 00
Q ss_pred -------------hhC-HHHHHHHHHHHHh-cCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 246 -------------LFT-PSLAQRYEQLYQQ-NGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 246 -------------~~~-~~~~~~l~~~l~~-~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
..+ ..+...+.+.+++ .|++++. ..|+.+..+ ++.+.+|.+.+|+++.||.||+|+|..++
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~--~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ--DTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE--CCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe--eEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 011 1445666777777 4999965 589998743 56677788999999999999999998754
No 220
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.15 E-value=3.4e-06 Score=85.60 Aligned_cols=100 Identities=23% Similarity=0.395 Sum_probs=70.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcch------hhhh-----CHHHHHHHHHHH-HhcCcEEEEcCce
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL------QRLF-----TPSLAQRYEQLY-QQNGVKFVKVGAS 272 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~l------~~~~-----~~~~~~~l~~~l-~~~Gv~~~~~~~~ 272 (489)
.++++|||+|+.|+.+|..|++. +.+|+++++.+.+. +..+ ...+.....+.+ ++.|+++++ +++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~-~~~ 81 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHL-NAE 81 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEET-TCE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEe-cCE
Confidence 36899999999999999999988 78999999987431 1100 111122222333 678999999 999
Q ss_pred EEEEEeCCCCcEEEEEeCCC-cEEEcCEEEEccCCCCCCc
Q 011267 273 IKNLEAGSDGRVAAVKLEDG-STIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~~~g-~~i~aD~vi~a~G~~p~~~ 311 (489)
|+.+... . ..+.+.++ .++.+|.+|+|||.+|...
T Consensus 82 v~~i~~~--~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 82 VIEVDTG--Y--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEEECSS--E--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEEecC--C--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 9998632 2 24666777 4799999999999988644
No 221
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.15 E-value=3.3e-06 Score=86.91 Aligned_cols=98 Identities=14% Similarity=0.196 Sum_probs=75.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
.++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~l 227 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGI---DSYIFARGNRIL---RKFDE-----------SV-----------INVLENDM 227 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCC---eEEEEecCCccC---cccch-----------hh-----------HHHHHHHH
Confidence 5799999999999999999999875 799999875421 10000 00 01235667
Q ss_pred HHCCcEEEeCCcEEEEeCCC---CEEEeCCCeE-EeeCcEEecCCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDIEK---QTLITNSGKL-LKYGSLIVATGCTASR 176 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~---~~v~~~~g~~-i~yd~lvlATG~~~~~ 176 (489)
++.|++++++++|.+++.+. ..+.+.+|++ +.+|.+++|+|..|..
T Consensus 228 ~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 228 KKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred HhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 88999999999999998642 3678888987 9999999999998863
No 222
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.14 E-value=8.6e-06 Score=78.42 Aligned_cols=99 Identities=15% Similarity=0.186 Sum_probs=74.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc---c--------hhh---hhCHHHHHHHHHHHHhcCcEEEEcCce
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR---LFTPSLAQRYEQLYQQNGVKFVKVGAS 272 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~---~--------l~~---~~~~~~~~~l~~~l~~~Gv~~~~~~~~ 272 (489)
..+++|||+|+.|+.+|..|++.|.+|+++++... + .+. .....+.+.+.+.+++.|++++. .+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~ 93 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG--VE 93 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET--CC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE--ee
Confidence 45799999999999999999999999999998521 0 111 11246667778888889999876 57
Q ss_pred EEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCC
Q 011267 273 IKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 310 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~ 310 (489)
++.+...++ .+ .|.+ +++++.+|.+|+|+|..|..
T Consensus 94 v~~i~~~~~-~~-~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 94 VRSIKKTQG-GF-DIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEEEETT-EE-EEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEEEeCC-EE-EEEE-CCCEEEeCEEEECCCCCccc
Confidence 888875432 22 3555 56689999999999988764
No 223
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.14 E-value=3.5e-06 Score=84.38 Aligned_cols=38 Identities=16% Similarity=0.271 Sum_probs=32.7
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCc-EEEEcCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGR-LCIVSKEAYA 89 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~-V~li~~~~~~ 89 (489)
++.+||+|||||++|+++|..|++.|. + |+|+|+.+..
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~---~~v~v~E~~~~~ 40 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGI---GKVTLLESSSEI 40 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC---SEEEEEESSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCC---CeEEEEECCCCc
Confidence 346899999999999999999999986 7 9999997653
No 224
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.13 E-value=4.4e-06 Score=85.46 Aligned_cols=99 Identities=15% Similarity=0.221 Sum_probs=75.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 235 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGS---ETHLVIRGETVL---RKFDE-----------CI-----------QNTITDH 235 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEeCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35789999999999999999999875 799999876421 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC----CEEEeCCC-eEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEK----QTLITNSG-KLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~----~~v~~~~g-~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++++++|.+++.+. ..+.+.+| .++.+|.+|+|+|..|..
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred HHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 778899999999999998642 36788889 789999999999988764
No 225
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.13 E-value=7.5e-07 Score=89.18 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=31.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~li~~~~ 87 (489)
..+||+|||||++|+++|++|++. |. +|+|||++.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~---~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGR---SLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCC---eEEEEeCCC
Confidence 458999999999999999999999 76 799999874
No 226
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.13 E-value=1e-05 Score=82.14 Aligned_cols=100 Identities=20% Similarity=0.229 Sum_probs=78.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch---------------hh---------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL---------------QR--------------------------- 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l---------------~~--------------------------- 245 (489)
.+|+|||||+.|+.+|..|++.|.+|+++++.+.+. ..
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 579999999999999999999999999999865321 00
Q ss_pred ---------hhC-HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC---CCc--EEEcCEEEEccCCCCC
Q 011267 246 ---------LFT-PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKPT 309 (489)
Q Consensus 246 ---------~~~-~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~---~g~--~i~aD~vi~a~G~~p~ 309 (489)
.++ ..+.+.+.+.+++.|+++++ +++|+++..+ ++.+.+|++. +|+ ++.||.||.|+|....
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~-~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWD-LTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEES-SEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEe-CcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 000 24566777777889999999 9999999854 4565556554 675 7999999999998765
No 227
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.13 E-value=4.6e-06 Score=87.69 Aligned_cols=103 Identities=20% Similarity=0.270 Sum_probs=75.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcc------hhhhh-----C--HHHHHHHHHHHHhcCcEEEEcC
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL------LQRLF-----T--PSLAQRYEQLYQQNGVKFVKVG 270 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~------l~~~~-----~--~~~~~~l~~~l~~~Gv~~~~~~ 270 (489)
..++|+|||||+.|+.+|..|++. +.+|+++++.+.+ ++..+ + ..+...+....++.|+++++ +
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~-~ 113 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRV-L 113 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEEC-S
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEE-C
Confidence 457899999999999999999998 8899999998763 11101 0 11223455666788999999 9
Q ss_pred ceEEEEEeCCCCcEEEEEe-CCCc--EEEcCEEEEccCCCCCCc
Q 011267 271 ASIKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 271 ~~v~~i~~~~~~~v~~v~~-~~g~--~i~aD~vi~a~G~~p~~~ 311 (489)
+.|+++... ++.+ .+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 114 ~~V~~id~~-~~~v-~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 114 SEVVKINKE-EKTI-TIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred CEEEEEECC-CCEE-EEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 999999843 3333 3332 4565 789999999999988643
No 228
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.13 E-value=1.8e-05 Score=82.95 Aligned_cols=101 Identities=20% Similarity=0.282 Sum_probs=80.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhC------CCcEEEEccCCcchhh------------------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGW------KLDTTIIFPENHLLQR------------------------------------ 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~l~~------------------------------------ 245 (489)
..|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999976432100
Q ss_pred --------hh---C--------------HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCC------C--
Q 011267 246 --------LF---T--------------PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLED------G-- 292 (489)
Q Consensus 246 --------~~---~--------------~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~------g-- 292 (489)
.+ + ..+.+.+.+.+++.|+++++ ++.++++..++++.+.+|.+.+ |
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~-g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~ 194 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYP-GYAAAEILFHEDGSVKGIATNDVGIQKDGAP 194 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEET-TCCEEEEEECTTSSEEEEEECCEEECTTSCE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEc-CCEEEEEEEcCCCCEEEEEeCCccccCCCCc
Confidence 00 0 14556777888889999999 9999999876667777787763 3
Q ss_pred -------cEEEcCEEEEccCCCCC
Q 011267 293 -------STIDADTIVIGIGAKPT 309 (489)
Q Consensus 293 -------~~i~aD~vi~a~G~~p~ 309 (489)
.++.||.||.|.|....
T Consensus 195 ~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 195 KTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEEECCCEEECSEEEECCCTTCH
T ss_pred ccccCCceEEECCEEEEeeCCCch
Confidence 68999999999999764
No 229
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.12 E-value=2.9e-06 Score=86.28 Aligned_cols=98 Identities=15% Similarity=0.291 Sum_probs=72.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... |.+.. .+ .....+.
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 220 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGT---KVTILEGAGEIL---SGFEK-----------QM-----------AAIIKKR 220 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999875 799999875421 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeC---CCeEEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~---~g~~i~yd~lvlATG~~~~ 175 (489)
+++.|++++.+++|.+++.+.. .+.+. ++.++.+|.+++|+|..|.
T Consensus 221 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 221 LKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp HHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 7788999999999999986543 34443 4567999999999998875
No 230
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.11 E-value=6.5e-06 Score=84.05 Aligned_cols=102 Identities=20% Similarity=0.280 Sum_probs=63.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcc------hhhhhCH------HH-------HHHHHHHHHhcCcE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL------LQRLFTP------SL-------AQRYEQLYQQNGVK 265 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~------l~~~~~~------~~-------~~~l~~~l~~~Gv~ 265 (489)
.++|+|||+|+.|+.+|..|++. +.+|+++++.+.+ ++..+.. .+ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 8999999998763 1111111 11 12222223357999
Q ss_pred EEEcCceEEEEEeCCCCcEEEEEe-CCCc--EEEcCEEEEccCCCCCCc
Q 011267 266 FVKVGASIKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 266 ~~~~~~~v~~i~~~~~~~v~~v~~-~~g~--~i~aD~vi~a~G~~p~~~ 311 (489)
+++ +++|++++.. +..+ .+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 83 ~~~-~~~V~~id~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALV-ETRAHAIDRA-AHTV-EIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EEC-SEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEE-CCEEEEEECC-CCEE-EEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999 9999999843 3332 3332 3465 799999999999988643
No 231
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.10 E-value=1.8e-05 Score=75.97 Aligned_cols=99 Identities=19% Similarity=0.217 Sum_probs=74.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc---ch--------h---hhhCHHHHHHHHHHHHhcCcEEEEcCceE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---LL--------Q---RLFTPSLAQRYEQLYQQNGVKFVKVGASI 273 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~---~l--------~---~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v 273 (489)
-.|+|||+|+.|+.+|..|+++|.+|+++++... .+ + ....+++.........+.+..+.. +..+
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 85 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQY-GDIK 85 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEE-CCCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccc-eeee
Confidence 3689999999999999999999999999987531 11 1 011356667777778888888888 7766
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCc
Q 011267 274 KNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 274 ~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
...... .. .+...+++++.+|.+|+|||.+|...
T Consensus 86 ~~~~~~-~~---~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 86 SVEDKG-EY---KVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EEEECS-SC---EEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eeeeee-cc---eeeccCCeEEEeceeEEcccCccCcC
Confidence 665532 22 34567788999999999999988643
No 232
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.10 E-value=2.6e-06 Score=88.55 Aligned_cols=44 Identities=20% Similarity=0.412 Sum_probs=35.4
Q ss_pred HHCCcEEEeCCcEEEEeCCC--C--EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~--~--~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
.+.|++++.+ +|+.++.+. . .|.+.+|.++.+|.||.|+|....
T Consensus 176 ~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 176 VERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 4569999998 899997642 2 577788888999999999998654
No 233
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.09 E-value=1.8e-05 Score=77.80 Aligned_cols=62 Identities=15% Similarity=0.254 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhc
Q 011267 250 SLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERV 316 (489)
Q Consensus 250 ~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~ 316 (489)
.+...+.+.+++.|++++. +++|+++..+++ .+ .|.+.+| ++.||.||+|+|.... .++..+
T Consensus 150 ~l~~~l~~~~~~~G~~i~~-~~~V~~i~~~~~-~~-~v~~~~g-~~~a~~vV~a~G~~s~-~l~~~l 211 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLF-NCPVTAIRHDDD-GV-TIETADG-EYQAKKAIVCAGTWVK-DLLPEL 211 (372)
T ss_dssp HHHHHHHHHHHHTTCEEEC-SCCEEEEEECSS-SE-EEEESSC-EEEEEEEEECCGGGGG-GTSTTC
T ss_pred HHHHHHHHHHHHCCCEEEc-CCEEEEEEEcCC-EE-EEEECCC-eEEcCEEEEcCCccHH-hhcccc
Confidence 3445566777788999999 999999986543 33 5777777 5999999999997653 344433
No 234
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.09 E-value=3.9e-06 Score=86.22 Aligned_cols=99 Identities=17% Similarity=0.297 Sum_probs=75.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQT 126 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~---g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (489)
..++++|||||+.|+.+|..|++. |. +|+++++.+... +.+.. .+ ....
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l 241 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGG---KVTLCYRNNLIL---RGFDE-----------TI-----------REEV 241 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTC---EEEEEESSSSSC---TTSCH-----------HH-----------HHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHH
Confidence 357899999999999999999998 65 799999876421 10000 00 0123
Q ss_pred hhHHHHCCcEEEeCCcEEEEeCCC---CEEEeCCCeEEeeCcEEecCCCCCCC
Q 011267 127 PEWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 127 ~~~~~~~~i~~~~~~~V~~id~~~---~~v~~~~g~~i~yd~lvlATG~~~~~ 176 (489)
.+.+++.|++++++++|.+++.+. ..+.+.+|+++.+|.+|+|+|..|..
T Consensus 242 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 242 TKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 566788999999999999998653 36788899899999999999988753
No 235
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.09 E-value=1.2e-05 Score=79.91 Aligned_cols=107 Identities=21% Similarity=0.264 Sum_probs=79.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch--------------hh----------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL--------------QR---------------------------- 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l--------------~~---------------------------- 245 (489)
..|+|||||+.|+-+|..|++.|.+|+++++.+.+. ..
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPI 84 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEE
Confidence 369999999999999999999999999999874210 00
Q ss_pred hhC--------------HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe---CCCcEEEcCEEEEccCCCC
Q 011267 246 LFT--------------PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL---EDGSTIDADTIVIGIGAKP 308 (489)
Q Consensus 246 ~~~--------------~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~---~~g~~i~aD~vi~a~G~~p 308 (489)
.++ ..+.+.+.+.+++.|++++. +++|+++..+ ++.+.+|.+ .+++++.||.||.|+|...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~-~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 85 ILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWV-KSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEES-SCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEE-CCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 000 13446677778888999999 9999999865 566655666 3556899999999999876
Q ss_pred CCchhhhcCC
Q 011267 309 TVSPFERVGL 318 (489)
Q Consensus 309 ~~~~~~~~gl 318 (489)
.+.+.+|+
T Consensus 163 --~~~~~~g~ 170 (397)
T 3cgv_A 163 --EFGRWAGL 170 (397)
T ss_dssp --HHHHHHTC
T ss_pred --HhHHhcCC
Confidence 33344443
No 236
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.09 E-value=6.2e-06 Score=84.63 Aligned_cols=99 Identities=17% Similarity=0.255 Sum_probs=75.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQT 126 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~---g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (489)
..++++|||||+.|+.+|..|++. |. +|+++++.+... +.+.. .+ ....
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l 237 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGG---QVDLAYRGDMIL---RGFDS-----------EL-----------RKQL 237 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTC---EEEEEESSSSSS---TTSCH-----------HH-----------HHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcC---eEEEEEcCCCcc---cccCH-----------HH-----------HHHH
Confidence 357999999999999999999998 65 799999876421 10000 00 0123
Q ss_pred hhHHHHCCcEEEeCCcEEEEeCCC---CEEEeCCCeEEeeCcEEecCCCCCCC
Q 011267 127 PEWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 127 ~~~~~~~~i~~~~~~~V~~id~~~---~~v~~~~g~~i~yd~lvlATG~~~~~ 176 (489)
.+.+++.|++++++++|.+++.+. ..+.+.+|+++.+|.+|+|+|..|..
T Consensus 238 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 238 TEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 456778999999999999998653 36788889889999999999988763
No 237
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.08 E-value=6.4e-06 Score=85.24 Aligned_cols=97 Identities=20% Similarity=0.237 Sum_probs=74.1
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHHH
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (489)
++++|||||..|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~l~ 266 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGR---RTVMLVRTEPLK---LIKDN-----------ET-----------RAYVLDRMK 266 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTT---TCCSH-----------HH-----------HHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC---eEEEEEecCccc---ccccH-----------HH-----------HHHHHHHHH
Confidence 799999999999999999999875 799999876421 00000 00 012356677
Q ss_pred HCCcEEEeCCcEEEEeC--CC----CEEEeCCCe-EEeeCcEEecCCCCCCC
Q 011267 132 EKGIEMIYQDPVTSIDI--EK----QTLITNSGK-LLKYGSLIVATGCTASR 176 (489)
Q Consensus 132 ~~~i~~~~~~~V~~id~--~~----~~v~~~~g~-~i~yd~lvlATG~~~~~ 176 (489)
+.|++++.+++|.+++. +. ..+.+.+|+ ++.+|.+|+|+|..|..
T Consensus 267 ~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 267 EQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp HTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred hCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 89999999999999986 33 347778887 89999999999988763
No 238
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.06 E-value=3.5e-06 Score=81.30 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=32.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~li~~~~~~ 89 (489)
..+||+|||||++|+++|..|+++ |. +|+|||+.+..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~---~V~LiEk~~~~ 116 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDL---RITIVEAGVAP 116 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTS---CEEEEESSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCC---EEEEEeCCCcc
Confidence 468999999999999999999997 65 79999998654
No 239
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.05 E-value=1.7e-05 Score=83.09 Aligned_cols=108 Identities=15% Similarity=0.216 Sum_probs=81.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch-------------------------h-----------------
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------Q----------------- 244 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------~----------------- 244 (489)
..+|+|||||+.|+-+|..|++.|.+|+++++.+..- .
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 5789999999999999999999999999999872100 0
Q ss_pred --------------------hhh-CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC-CC--cEEEcCEE
Q 011267 245 --------------------RLF-TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE-DG--STIDADTI 300 (489)
Q Consensus 245 --------------------~~~-~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~-~g--~~i~aD~v 300 (489)
..+ ...+...+.+.+++.|++++. +++|+++... ++.+..|.+. +| +++.||.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~-g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlV 180 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHE-ETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFV 180 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEET-TCCEEEEECC-STTCEEEEEEETTEEEEEEESEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEe-CCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEE
Confidence 000 134566777888889999999 9999999854 4455567776 66 57999999
Q ss_pred EEccCCCCCCchhhhcCC
Q 011267 301 VIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 301 i~a~G~~p~~~~~~~~gl 318 (489)
|.|+|... .+.+.+++
T Consensus 181 V~AdG~~S--~lr~~lg~ 196 (591)
T 3i3l_A 181 IDAGGSGG--PISRKLGV 196 (591)
T ss_dssp EECCGGGC--HHHHHHTC
T ss_pred EECCCCcc--hhHHHcCC
Confidence 99999865 33344444
No 240
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.05 E-value=7.4e-06 Score=84.69 Aligned_cols=98 Identities=9% Similarity=0.064 Sum_probs=74.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChh
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (489)
.-+++++|||||+.|+..|..+++.|. +|||++++..++..-+.+ ......
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~---~VTii~~~~~L~~~D~ei--------------------------~~~l~~ 271 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGY---DVTVAVRSIVLRGFDQQC--------------------------AVKVKL 271 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEESSCSSTTSCHHH--------------------------HHHHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCC---eEEEecccccccccchhH--------------------------HHHHHH
Confidence 345789999999999999999999986 699997654322110000 022356
Q ss_pred HHHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 129 ~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
.+++.++.++++..+..+..... .+.+.++.++.+|.+++|+|-+|.
T Consensus 272 ~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 272 YMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp HHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCC
Confidence 67889999999999998876554 556778888999999999998775
No 241
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.04 E-value=2.1e-05 Score=78.27 Aligned_cols=99 Identities=15% Similarity=0.145 Sum_probs=71.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh------hhCHHHH------------------------------
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSLA------------------------------ 252 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------~~~~~~~------------------------------ 252 (489)
+|+|||+|+.|+-+|..|++.|.+|+|+++.+.+... .+.+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999976432110 0011100
Q ss_pred -----------------------------HHHHHHHH-hcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEE
Q 011267 253 -----------------------------QRYEQLYQ-QNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVI 302 (489)
Q Consensus 253 -----------------------------~~l~~~l~-~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~ 302 (489)
..+.+.|. ..+..+++ ++++++++..+++.+ .|+++||+++.||+||-
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~-~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQW-NKTFVRYEHIENGGI-KIFFADGSHENVDVLVG 160 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEEC-SCCEEEEEECTTSCE-EEEETTSCEEEESEEEE
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEE-EEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEE
Confidence 11223222 23446788 999999987666665 58999999999999999
Q ss_pred ccCCCCC
Q 011267 303 GIGAKPT 309 (489)
Q Consensus 303 a~G~~p~ 309 (489)
|-|....
T Consensus 161 ADG~~S~ 167 (412)
T 4hb9_A 161 ADGSNSK 167 (412)
T ss_dssp CCCTTCH
T ss_pred CCCCCcc
Confidence 9998653
No 242
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.04 E-value=6e-06 Score=84.49 Aligned_cols=98 Identities=17% Similarity=0.316 Sum_probs=72.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
.++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+.. .+ .....+.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~l 234 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGS---KVTVVEFQPQIG---ASMDG-----------EV-----------AKATQKFL 234 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---SSSCH-----------HH-----------HHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC---EEEEEEeCCccc---cccCH-----------HH-----------HHHHHHHH
Confidence 5799999999999999999999875 799999876421 00000 00 01234567
Q ss_pred HHCCcEEEeCCcEEEEeC--CCC--EEEeC-----CCeEEeeCcEEecCCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDI--EKQ--TLITN-----SGKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~--~~~--~v~~~-----~g~~i~yd~lvlATG~~~~~ 176 (489)
++.|++++.+++|.+++. +.. .+.+. ++.++.+|.+|+|+|..|..
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 788999999999999986 443 44554 45679999999999988763
No 243
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.04 E-value=4.3e-06 Score=85.65 Aligned_cols=99 Identities=13% Similarity=0.174 Sum_probs=73.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... +.+.. .+ .....+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 235 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLGS---RLDVVEMMDGLM---QGADR-----------DL-----------VKVWQKQ 235 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999875 799999876421 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCC----CeEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNS----GKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~----g~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++++++|.+++.+.. .+.+.+ |+++.+|.+++|+|..|..
T Consensus 236 l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 236 NEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp HGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred HHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 7788999999999999976543 566666 7789999999999988753
No 244
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.03 E-value=2.5e-05 Score=80.55 Aligned_cols=100 Identities=16% Similarity=0.197 Sum_probs=76.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc----------------chh------h--------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH----------------LLQ------R-------------------- 245 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~----------------~l~------~-------------------- 245 (489)
.+|+|||||+.|+-+|..|++.|.+|+++++.+. ++. .
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 4799999999999999999999999999998741 000 0
Q ss_pred -------------------hh-CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe--CCCc--EEEcCEEE
Q 011267 246 -------------------LF-TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL--EDGS--TIDADTIV 301 (489)
Q Consensus 246 -------------------~~-~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~--~~g~--~i~aD~vi 301 (489)
.+ ...+.+.+.+.+++.|++++. +++|+++..+ ++.+.+|.+ .+|+ ++.||.||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~-~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI 165 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRE-RHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIV 165 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEES-SCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEc-CCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEE
Confidence 00 124556677778889999999 9999999864 455544544 4574 79999999
Q ss_pred EccCCCCC
Q 011267 302 IGIGAKPT 309 (489)
Q Consensus 302 ~a~G~~p~ 309 (489)
.|+|....
T Consensus 166 ~AdG~~S~ 173 (512)
T 3e1t_A 166 DASGNRTR 173 (512)
T ss_dssp ECCCTTCS
T ss_pred ECCCcchH
Confidence 99998653
No 245
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.03 E-value=7.8e-06 Score=83.54 Aligned_cols=99 Identities=11% Similarity=0.173 Sum_probs=72.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
.++++|||||+.|+.+|..|++.|. +|+++++.+...- + .+.. .+ .....+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~-~-~~~~-----------~~-----------~~~l~~~l 230 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGA---DVTAVEFLGHVGG-V-GIDM-----------EI-----------SKNFQRIL 230 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSC-S-SCCH-----------HH-----------HHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC---EEEEEeccCccCC-c-ccCH-----------HH-----------HHHHHHHH
Confidence 5789999999999999999999875 7999998764210 0 0000 00 01234567
Q ss_pred HHCCcEEEeCCcEEEEeCCCC---EEEe-----CCCeEEeeCcEEecCCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDIEKQ---TLIT-----NSGKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~~---~v~~-----~~g~~i~yd~lvlATG~~~~~ 176 (489)
++.|++++.+++|.+++.+.. .+.+ .++.++++|.+|+|+|..|..
T Consensus 231 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 231 QKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp HHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred HHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 789999999999999986542 3442 466789999999999988753
No 246
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.03 E-value=4.6e-06 Score=84.67 Aligned_cols=100 Identities=22% Similarity=0.261 Sum_probs=71.5
Q ss_pred cEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcc----------hhhhh---CH-HHHHHHHHHHHhcCcEEEEcCce
Q 011267 209 KVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL----------LQRLF---TP-SLAQRYEQLYQQNGVKFVKVGAS 272 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~----------l~~~~---~~-~~~~~l~~~l~~~Gv~~~~~~~~ 272 (489)
+++|||+|+.|+.+|..|++. |.+|+++++.+.+ +.... ++ .+...+.+.+++.|++++. ++.
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~-~~~ 80 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQM-RHQ 80 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEE-SEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEe-CCE
Confidence 689999999999999999998 9999999988742 11110 11 1112234567788999999 999
Q ss_pred EEEEEeCCCCcEEEEEe-CC--CcEEEcCEEEEccCCCCCCc
Q 011267 273 IKNLEAGSDGRVAAVKL-ED--GSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~-~~--g~~i~aD~vi~a~G~~p~~~ 311 (489)
+..+... ++.+ .+.. .+ ++++.+|.+|+|+|.+|...
T Consensus 81 v~~i~~~-~~~v-~v~~~~~g~~~~~~~d~lviAtGs~p~~p 120 (452)
T 2cdu_A 81 VTNVDPE-TKTI-KVKDLITNEEKTEAYDKLIMTTGSKPTVP 120 (452)
T ss_dssp EEEEEGG-GTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEcC-CCEE-EEEecCCCceEEEECCEEEEccCCCcCCC
Confidence 9999743 2322 2332 12 45799999999999988744
No 247
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.03 E-value=9.8e-06 Score=83.14 Aligned_cols=98 Identities=17% Similarity=0.288 Sum_probs=73.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++|+|||||+.|+.+|..|++.|. +|+++++.+...- . .+ + ..+ .....+.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l~------~-~~-~-----~~~-----------~~~l~~~ 245 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGK---EVVLIDVVDTCLA------G-YY-D-----RDL-----------TDLMAKN 245 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTT------T-TS-C-----HHH-----------HHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC---eEEEEEcccchhh------h-HH-H-----HHH-----------HHHHHHH
Confidence 46789999999999999999999875 7999998764210 0 00 0 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
+++.|++++++++|.+++.+.+ .+.+ +|.++++|.+|+|+|..|.
T Consensus 246 l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 246 MEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred HHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 7788999999999999987543 3555 6778999999999998875
No 248
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.02 E-value=8.8e-06 Score=83.94 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=33.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
..+||||||+|+||++||.+|++.|. +|+|||+.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~---~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGA---DVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 45899999999999999999999986 69999998754
No 249
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.01 E-value=9.9e-06 Score=83.32 Aligned_cols=99 Identities=13% Similarity=0.250 Sum_probs=75.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||+|+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 232 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGV---PVTVVASQDHVL---PYEDA-----------DA-----------ALVLEES 232 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTC---CEEEECSSSSSS---CCSSH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35789999999999999999999875 799999876421 00000 00 0223556
Q ss_pred HHHCCcEEEeCCcEEEEeCCC--CEEEeCCCeEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~--~~v~~~~g~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++++++|.+++.+. -.+.+.+|.++.+|.+|+|+|..|..
T Consensus 233 l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 233 FAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 778999999999999998655 35666788889999999999988763
No 250
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.01 E-value=8.1e-06 Score=83.17 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=72.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+|+++.+... |.+.. .+ .....+.
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 221 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGV---DVTIVEFLPRAL---PNEDA-----------DV-----------SKEIEKQ 221 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999875 799999875421 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeC-CC--eEEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN-SG--KLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~-~g--~~i~yd~lvlATG~~~~ 175 (489)
+++.|++++++++|.+++.+.. .+.+. +| .++.+|.+++|+|..|.
T Consensus 222 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 222 FKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp HHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred HHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 7788999999999999986543 44543 56 67999999999998875
No 251
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.01 E-value=6.2e-05 Score=78.13 Aligned_cols=56 Identities=16% Similarity=0.290 Sum_probs=46.0
Q ss_pred HHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCC
Q 011267 253 QRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV 310 (489)
Q Consensus 253 ~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~ 310 (489)
..+.+.+++.|++++. + +|+++..++++.+..|.+.+|+++.||.||.|+|.....
T Consensus 169 ~~L~~~a~~~gv~~~~-~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVV-D-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHTTCEEEE-C-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHCCCEEEE-e-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 4555666778999999 8 899998766666667889999889999999999987653
No 252
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.00 E-value=9.2e-06 Score=84.93 Aligned_cols=101 Identities=22% Similarity=0.241 Sum_probs=71.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcch------hhhhC-----H--HHHHHHHHHHHhcCcEEEEcCce
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLL------QRLFT-----P--SLAQRYEQLYQQNGVKFVKVGAS 272 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~l------~~~~~-----~--~~~~~l~~~l~~~Gv~~~~~~~~ 272 (489)
++|+|||+|+.|+.+|..|++. +.+|+++++.+.+. +..+. . .+........++.|+++++ +++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~ 80 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRV-KHE 80 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEET-TEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEE-CCE
Confidence 5799999999999999999988 78999999987531 11110 0 0111233444457999999 999
Q ss_pred EEEEEeCCCCcEEEEEe-CCCc--EEEcCEEEEccCCCCCCc
Q 011267 273 IKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~-~~g~--~i~aD~vi~a~G~~p~~~ 311 (489)
|+++... .+.+ .+.. .+|+ ++.+|.+|+|||.+|...
T Consensus 81 V~~id~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 81 VVAIDRA-AKLV-TVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEECC-CCEE-EEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 9999843 3333 3332 3354 799999999999988644
No 253
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.00 E-value=2.6e-05 Score=75.88 Aligned_cols=95 Identities=18% Similarity=0.185 Sum_probs=68.8
Q ss_pred cEEEECCCHHHHHHHHHHHh---CCCcEEEEccCCcchhhh----------------------hCH---HH---------
Q 011267 209 KVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------------------FTP---SL--------- 251 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~---~g~~V~lv~~~~~~l~~~----------------------~~~---~~--------- 251 (489)
+|+|||+|..|+-+|..|++ .|.+|+++++.+.+..+. .+. .+
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 999999999764221100 000 11
Q ss_pred -----------------------------HHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEE
Q 011267 252 -----------------------------AQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVI 302 (489)
Q Consensus 252 -----------------------------~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~ 302 (489)
...+....++.|+++++ ++.|+++..++++ + .|.+.+|+++.+|.||+
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~-~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~ 159 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYF-RHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVL 159 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEES-SCCEEEEEECSSS-E-EEEESSSCCEEESEEEE
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEe-CCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEE
Confidence 11222233334899999 9999999875443 3 47888888899999999
Q ss_pred ccCC
Q 011267 303 GIGA 306 (489)
Q Consensus 303 a~G~ 306 (489)
|+..
T Consensus 160 A~p~ 163 (342)
T 3qj4_A 160 TMPV 163 (342)
T ss_dssp CSCH
T ss_pred CCCH
Confidence 9873
No 254
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.00 E-value=2.8e-05 Score=80.65 Aligned_cols=99 Identities=17% Similarity=0.185 Sum_probs=76.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch--------------------------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------------- 243 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------------------- 243 (489)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999999874210
Q ss_pred -------h----h---------h--------h-CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCC---cEEEEEeCC
Q 011267 244 -------Q----R---------L--------F-TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDG---RVAAVKLED 291 (489)
Q Consensus 244 -------~----~---------~--------~-~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~---~v~~v~~~~ 291 (489)
. . . + ...+...+.+.+++.|+++++ +++|++++.++++ .+ .+++.+
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~-~~~v~~i~~~~~~~~~~v-~v~~~~ 163 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRF-GTRLLSFRQHDDDAGAGV-TARLAG 163 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEES-SCEEEEEEEECGGGCSEE-EEEEEE
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEe-CCEEEEEEECCCCccccE-EEEEEc
Confidence 0 0 0 0 124556677888888999999 9999999876542 33 466666
Q ss_pred C---cEEEcCEEEEccCCCC
Q 011267 292 G---STIDADTIVIGIGAKP 308 (489)
Q Consensus 292 g---~~i~aD~vi~a~G~~p 308 (489)
+ .++.||.||.|.|...
T Consensus 164 ~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 164 PDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp TTEEEEEEEEEEEECCCTTC
T ss_pred CCCeEEEEeCEEEECCCCcc
Confidence 5 6899999999999865
No 255
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.98 E-value=3e-05 Score=77.38 Aligned_cols=100 Identities=20% Similarity=0.296 Sum_probs=75.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh----------------------------------------
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR---------------------------------------- 245 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~---------------------------------------- 245 (489)
...+|+|||||+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3568999999999999999999999999999987532100
Q ss_pred -----hh-----------------CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEc
Q 011267 246 -----LF-----------------TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIG 303 (489)
Q Consensus 246 -----~~-----------------~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a 303 (489)
.+ ...+.+.+.+.+++ +++++ +++|++++.+++ .+ .|++.+|+++.||.||.|
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~-~~~v~~i~~~~~-~v-~v~~~~g~~~~a~~vV~A 176 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQF-GKRVTRCEEDAD-GV-TVWFTDGSSASGDLLIAA 176 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEE-SCCEEEEEEETT-EE-EEEETTSCEEEESEEEEC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEE-CCEEEEEEecCC-cE-EEEEcCCCEEeeCEEEEC
Confidence 00 02234455555554 88999 999999986543 33 588899999999999999
Q ss_pred cCCCCCC
Q 011267 304 IGAKPTV 310 (489)
Q Consensus 304 ~G~~p~~ 310 (489)
.|.....
T Consensus 177 dG~~S~v 183 (407)
T 3rp8_A 177 DGSHSAL 183 (407)
T ss_dssp CCTTCSS
T ss_pred CCcChHH
Confidence 9987654
No 256
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.97 E-value=2.2e-05 Score=81.89 Aligned_cols=107 Identities=17% Similarity=0.218 Sum_probs=79.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch-------------------------------------hhh----
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------QRL---- 246 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------------~~~---- 246 (489)
..|+|||+|+.|+-+|..|++.|.+|+++++.+.+. ...
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999999753210 000
Q ss_pred ---------------h-CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe--CCC-cEEEcCEEEEccCCC
Q 011267 247 ---------------F-TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL--EDG-STIDADTIVIGIGAK 307 (489)
Q Consensus 247 ---------------~-~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~--~~g-~~i~aD~vi~a~G~~ 307 (489)
+ ...+.+.+.+.+++.|+++++ +++|++++.++++ + .|++ .+| +++.||.||.|.|..
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~-~~~v~~l~~~~~~-v-~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPR-GHEVTRLRQDAEA-V-EVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCB-SCEEEECCBCSSC-E-EEEEEETTEEEEEEESEEEECSCSS
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEe-CCEEEEEEEcCCe-E-EEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 0 134566777788888999999 9999999865444 3 3555 678 789999999999986
Q ss_pred CCCchhhhcCCe
Q 011267 308 PTVSPFERVGLN 319 (489)
Q Consensus 308 p~~~~~~~~gl~ 319 (489)
. ..-+.+|+.
T Consensus 207 S--~vR~~lGi~ 216 (570)
T 3fmw_A 207 S--TVRRLAADR 216 (570)
T ss_dssp C--HHHHHTTCC
T ss_pred c--hHHHHcCCC
Confidence 5 333444443
No 257
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.97 E-value=6.4e-06 Score=87.35 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=32.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHH-cCCCCCcEEEEcCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSKEAYA 89 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~-~g~~~~~V~li~~~~~~ 89 (489)
..+||+|||||++|+++|..|++ .|. +|+|||+.+..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~---~V~viEr~~~~ 68 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDI---RTCIVEQKEGP 68 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTS---CEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCC---CEEEEeCCCCC
Confidence 45799999999999999999999 887 79999998653
No 258
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.97 E-value=1.2e-05 Score=82.00 Aligned_cols=98 Identities=15% Similarity=0.250 Sum_probs=71.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 224 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGA---EVTVVEFAPRCA---PTLDE-----------DV-----------TNALVGA 224 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCC---EEEEEecCCccc---ccCCH-----------HH-----------HHHHHHH
Confidence 35789999999999999999999875 799999875421 10000 00 0123456
Q ss_pred H-HHCCcEEEeCCcEEEEeCCCC--EEEeC--CC--eEEeeCcEEecCCCCCC
Q 011267 130 Y-KEKGIEMIYQDPVTSIDIEKQ--TLITN--SG--KLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~-~~~~i~~~~~~~V~~id~~~~--~v~~~--~g--~~i~yd~lvlATG~~~~ 175 (489)
+ ++.|++++++++|.+++.+.. .+.+. +| .++.+|.+|+|+|..|.
T Consensus 225 l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 225 LAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp HHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred HhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 7 889999999999999986543 45554 66 67999999999998875
No 259
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.97 E-value=7e-06 Score=89.88 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=32.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
+++||||||||++|+++|++|++.|. .+|+|||++..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~--~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGW--NNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC--CCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCC--CcEEEEeCCCC
Confidence 45899999999999999999999975 26999999864
No 260
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.96 E-value=5.4e-05 Score=72.58 Aligned_cols=101 Identities=21% Similarity=0.239 Sum_probs=74.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcchhh-------------------h------------------hC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQR-------------------L------------------FT 248 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~l~~-------------------~------------------~~ 248 (489)
.+|+|||+|+.|+.+|..|++. |.+|+++++.+.+... . ..
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 4799999999999999999998 9999999986433100 0 12
Q ss_pred HHHHHHHHHHHHhc-CcEEEEcCceEEEEEeCC--C-C--cEEEEEeC--------------CCcEEEc-----------
Q 011267 249 PSLAQRYEQLYQQN-GVKFVKVGASIKNLEAGS--D-G--RVAAVKLE--------------DGSTIDA----------- 297 (489)
Q Consensus 249 ~~~~~~l~~~l~~~-Gv~~~~~~~~v~~i~~~~--~-~--~v~~v~~~--------------~g~~i~a----------- 297 (489)
..+...+.+.+.+. |++++. ++.|+++..++ + + ++.+|.+. ++.++.|
T Consensus 146 ~~~~~~L~~~a~~~~GV~i~~-~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNVKLFN-ATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHTSTTEEEET-TEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred HHHHHHHHHHHHHhcCcEEEe-cceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 34455566666664 999999 99999998653 3 4 77777652 3357999
Q ss_pred ----CEEEEccCCCCC
Q 011267 298 ----DTIVIGIGAKPT 309 (489)
Q Consensus 298 ----D~vi~a~G~~p~ 309 (489)
+.||.|+|....
T Consensus 225 ~~~~~~VV~ATG~~~~ 240 (326)
T 2gjc_A 225 SQKHGVILSTTGHDGP 240 (326)
T ss_dssp STTCCEEEECCCCC--
T ss_pred cccCCEEEECcCCCch
Confidence 999999998743
No 261
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.96 E-value=1.4e-05 Score=81.82 Aligned_cols=98 Identities=20% Similarity=0.343 Sum_probs=74.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||+|+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtli~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 241 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGV---KTTLLHRGDLIL---RNFDY-----------DL-----------RQLLNDA 241 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCC---eEEEEECCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999875 799999876421 00000 00 0123455
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
+++.|++++.+++|.+++.+.. .+.+.+|+++.+|.+|+|+|..|.
T Consensus 242 l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 242 MVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 6778999999999999987543 677889989999999999998775
No 262
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.95 E-value=3.9e-05 Score=76.35 Aligned_cols=102 Identities=18% Similarity=0.310 Sum_probs=71.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh----hh---C---H----------HH--------------
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----LF---T---P----------SL-------------- 251 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~----~~---~---~----------~~-------------- 251 (489)
...+|+|||||+.|+.+|..|++.|.+|+++++.+.+..+ .+ . . .+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 3468999999999999999999999999999987532110 00 0 0 00
Q ss_pred ----------------------HHHHHHHHHh--cCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 252 ----------------------AQRYEQLYQQ--NGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 252 ----------------------~~~l~~~l~~--~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
...+.+.|.+ .++++++ +++|++++.++ +.+ .|++.+|+++.+|.||.|.|..
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~-~~~v~~i~~~~-~~v-~v~~~~g~~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIW-DRKLVMLEPGK-KKW-TLTFENKPSETADLVILANGGM 181 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEE-SCCEEEEEECS-SSE-EEEETTSCCEEESEEEECSCTT
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEE-CCEEEEEEECC-CEE-EEEECCCcEEecCEEEECCCcc
Confidence 0011222221 1357888 99999998654 344 5888899899999999999987
Q ss_pred CCC
Q 011267 308 PTV 310 (489)
Q Consensus 308 p~~ 310 (489)
...
T Consensus 182 S~v 184 (398)
T 2xdo_A 182 SKV 184 (398)
T ss_dssp CSC
T ss_pred hhH
Confidence 653
No 263
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.93 E-value=2.7e-05 Score=79.26 Aligned_cols=98 Identities=23% Similarity=0.291 Sum_probs=71.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhh------------------------------hCH-H------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------------------FTP-S------ 250 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~------------------------------~~~-~------ 250 (489)
..++|||+|+.|+.+|..|++.|.+|+++++.+.+-..+ ++. .
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKD 84 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHH
Confidence 469999999999999999999999999999766431110 000 0
Q ss_pred ----HH--HHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcE--EEcCEEEEccCCCCCCc
Q 011267 251 ----LA--QRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGST--IDADTIVIGIGAKPTVS 311 (489)
Q Consensus 251 ----~~--~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~--i~aD~vi~a~G~~p~~~ 311 (489)
+. ..+.+.+++.|++++. + .+..+.. .. ..|.+.+|++ +.+|.+|+|+|.+|...
T Consensus 85 ~~~~l~~~~~~~~~~~~~~v~~~~-g-~v~~id~---~~-~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 85 YVQELRFKQHKRNMSQYETLTFYK-G-YVKIKDP---TH-VIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEES-E-EEEEEET---TE-EEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred hheeccccchHHHHHHhCCCEEEE-e-EEEEecC---Ce-EEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 11 3444556678999987 5 6777652 22 3577788888 99999999999988654
No 264
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.93 E-value=1.8e-05 Score=80.88 Aligned_cols=101 Identities=17% Similarity=0.281 Sum_probs=71.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcc------hhhhh------CHHHHHHHHHHH-HhcCcEEEEcCce
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL------LQRLF------TPSLAQRYEQLY-QQNGVKFVKVGAS 272 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~------l~~~~------~~~~~~~l~~~l-~~~Gv~~~~~~~~ 272 (489)
.+++|||+|+.|+.+|..|++. |.+|+++++.+.+ ++..+ ...+.....+.+ ++.|++++. ++.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~-~~~ 115 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKV-RHE 115 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEES-SEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEe-CCE
Confidence 5899999999999999999986 8899999988653 11110 011111223445 445999999 999
Q ss_pred EEEEEeCCCCcEEEEEe-CCCc--EEEcCEEEEccCCCCCCc
Q 011267 273 IKNLEAGSDGRVAAVKL-EDGS--TIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 273 v~~i~~~~~~~v~~v~~-~~g~--~i~aD~vi~a~G~~p~~~ 311 (489)
|+.+... ++.+ .+.. .+|+ ++.+|.+|+|+|.+|...
T Consensus 116 v~~i~~~-~~~v-~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (480)
T 3cgb_A 116 VTKVDTE-KKIV-YAEHTKTKDVFEFSYDRLLIATGVRPVMP 155 (480)
T ss_dssp EEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEECC-CCEE-EEEEcCCCceEEEEcCEEEECCCCcccCC
Confidence 9999743 3333 3433 4576 799999999999988643
No 265
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=4.8e-05 Score=77.51 Aligned_cols=99 Identities=25% Similarity=0.347 Sum_probs=70.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhh------------------------------------hCH-
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------------------------FTP- 249 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~------------------------------------~~~- 249 (489)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+.... ++.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLA 85 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 4679999999999999999999999999999886331000 000
Q ss_pred -----------HHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCC--cEEEcCEEEEccCCCCCCc
Q 011267 250 -----------SLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDG--STIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 250 -----------~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g--~~i~aD~vi~a~G~~p~~~ 311 (489)
.+...+.+.+++.||+++. ++.+. +. .+. ..|.+.+| +++.+|.+|+|+|.+|...
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~-g~~~~-~~---~~~-~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKVTYVK-GYGKF-VS---PSE-ISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEE-SCEEE-EE---TTE-EEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eEEEE-ec---CCE-EEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 0112234566778999999 87553 43 222 24566677 6899999999999988654
No 266
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.92 E-value=7.2e-05 Score=77.05 Aligned_cols=58 Identities=17% Similarity=0.260 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCC-c--EEEcC-EEEEccCCCC
Q 011267 250 SLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDG-S--TIDAD-TIVIGIGAKP 308 (489)
Q Consensus 250 ~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g-~--~i~aD-~vi~a~G~~p 308 (489)
.+...+.+.+++.|+++++ ++.|+++..++++++.+|...++ + ++.|| .||+|+|...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~-~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEY-DMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEEC-SEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEe-cCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 4566677778889999999 99999998765688888877543 2 58996 9999999765
No 267
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.91 E-value=1.3e-05 Score=82.23 Aligned_cols=101 Identities=18% Similarity=0.330 Sum_probs=69.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch-----hh----hhCH-HHHHHHHHHH--HhcCcEEEEcCceEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-----QR----LFTP-SLAQRYEQLY--QQNGVKFVKVGASIK 274 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l-----~~----~~~~-~~~~~l~~~l--~~~Gv~~~~~~~~v~ 274 (489)
.++|||||+|+.|+.+|..|.+.+.+|++|++.+... +. .+++ ++...+.+.+ ++.+++++. .+++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~--~~v~ 119 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYE--AEAT 119 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEE--EEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEE--EEEE
Confidence 4589999999999999999999999999999987532 11 1111 1111123322 345799887 6889
Q ss_pred EEEeCCCCcEEEEE------------------eCCCcEEEcCEEEEccCCCCCCc
Q 011267 275 NLEAGSDGRVAAVK------------------LEDGSTIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 275 ~i~~~~~~~v~~v~------------------~~~g~~i~aD~vi~a~G~~p~~~ 311 (489)
+|+.+ ...+ .+. ..++.++++|.+|+|+|.+|+..
T Consensus 120 ~ID~~-~k~V-~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 120 SINPD-RNTV-TIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EEEGG-GTEE-EEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred EEEhh-hCEE-EEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 98743 2222 222 13466899999999999998753
No 268
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.91 E-value=8.2e-05 Score=71.75 Aligned_cols=139 Identities=21% Similarity=0.217 Sum_probs=91.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcchhh-------------------------------------hh
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHLLQR-------------------------------------LF 247 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~l~~-------------------------------------~~ 247 (489)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+... ..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 45799999999999999999997 9999999987532100 00
Q ss_pred CHHHHHHHHHHHHh-cCcEEEEcCceEEEEEeCCC----------------C--cEEEEEeC--------------CCcE
Q 011267 248 TPSLAQRYEQLYQQ-NGVKFVKVGASIKNLEAGSD----------------G--RVAAVKLE--------------DGST 294 (489)
Q Consensus 248 ~~~~~~~l~~~l~~-~Gv~~~~~~~~v~~i~~~~~----------------~--~v~~v~~~--------------~g~~ 294 (489)
..++.+.+.+.+++ .|++++. ++.++++..+++ + ++.+|... +..+
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~-~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~ 237 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFN-ATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNT 237 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEE-TEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEe-CCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceE
Confidence 13344566666666 5999999 999999875432 3 66677652 2247
Q ss_pred EEcCEEEEccCCCCCC-c----hhhhcCCeec-CCcEEeCCC-------CCC--CCCCeEEeccccc
Q 011267 295 IDADTIVIGIGAKPTV-S----PFERVGLNSS-VGGIQVDGQ-------FRT--RMPGIFAIGDVAA 346 (489)
Q Consensus 295 i~aD~vi~a~G~~p~~-~----~~~~~gl~~~-~g~i~vd~~-------~~t--~~~~Iya~GD~a~ 346 (489)
+.|+.||.|+|..... . .+...++... .|.-..|.. -.| -+|++|++|=.+.
T Consensus 238 i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~ 304 (344)
T 3jsk_A 238 INAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELS 304 (344)
T ss_dssp EECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHH
T ss_pred EEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhH
Confidence 9999999999987542 1 1344554321 111111110 012 3699999997764
No 269
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.90 E-value=6.9e-06 Score=83.32 Aligned_cols=90 Identities=14% Similarity=0.194 Sum_probs=69.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc-------hhh-hhCHHHHHHHHHHHHhcCcEEEEcCceEEEEE
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-------LQR-LFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~-------l~~-~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~ 277 (489)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ ++. .++.++.+...+.+++.||++++ ++.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~-~~~v~--- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHP-NFEVG--- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEET-TCCBT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEe-CCEec---
Confidence 3578999999999999999999999999999998754 121 13566777788889999999999 87652
Q ss_pred eCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 278 AGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 278 ~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
. .+.++++ .+.+|.||+|+|..
T Consensus 197 ----~---~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 197 ----R---DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp ----T---TBCHHHH-HSSCSEEEECCCCC
T ss_pred ----c---EEEhhHh-HhhCCEEEEecCCC
Confidence 0 1223333 35799999999986
No 270
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.89 E-value=2.2e-05 Score=79.99 Aligned_cols=96 Identities=18% Similarity=0.269 Sum_probs=72.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+++++.+... | +.. .+ .....+.
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~-~~~-----------~~-----------~~~l~~~ 225 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGS---KVTVLARNTLFF---R-EDP-----------AI-----------GEAVTAA 225 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTT---T-SCH-----------HH-----------HHHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEEECCccC---C-CCH-----------HH-----------HHHHHHH
Confidence 35789999999999999999999875 799999876420 0 100 00 1223556
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
+++.|++++.+++|.+++.+.. .+.++ +.++.+|.+|+|+|..|.
T Consensus 226 l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 226 FRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEES
T ss_pred HHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcC
Confidence 7789999999999999976544 35555 567999999999998875
No 271
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.88 E-value=1.7e-05 Score=79.20 Aligned_cols=106 Identities=21% Similarity=0.206 Sum_probs=74.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCcEEEEccCC------------cc-hhhhh-------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPEN------------HL-LQRLF------------------------- 247 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~------------~~-l~~~~------------------------- 247 (489)
..|+|||+|.+|+-+|..|++. |.+|+++++.. .+ .+..+
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKTL 116 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCCC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCCC
Confidence 5799999999999999999999 99999998753 12 01000
Q ss_pred ------------------------------------------------------CHHHHHHHHHHHHhcCcEEEEcCceE
Q 011267 248 ------------------------------------------------------TPSLAQRYEQLYQQNGVKFVKVGASI 273 (489)
Q Consensus 248 ------------------------------------------------------~~~~~~~l~~~l~~~Gv~~~~~~~~v 273 (489)
+..+...+.+.+++.|+++++ +++|
T Consensus 117 ~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~-~~~v 195 (405)
T 3c4n_A 117 EVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLL-NTRA 195 (405)
T ss_dssp CEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEEC-SCEE
T ss_pred cEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEc-CCEE
Confidence 012555677778889999999 9999
Q ss_pred E---------EEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhh-hcCC
Q 011267 274 K---------NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFE-RVGL 318 (489)
Q Consensus 274 ~---------~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~-~~gl 318 (489)
+ ++..+ ++.+ .|.+.+| ++.||.||+|+|.... .+++ .+++
T Consensus 196 ~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s~-~l~~~~~g~ 246 (405)
T 3c4n_A 196 ELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAGP-ALVEQGLGL 246 (405)
T ss_dssp EEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGHH-HHHHHHHCC
T ss_pred EeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccHH-HHHHHhcCC
Confidence 9 88643 3444 5666666 7999999999998753 4555 5444
No 272
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.87 E-value=2.4e-05 Score=80.32 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=70.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 224 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGV---IVKVFGRSGSVA---NLQDE-----------EM-----------KRYAEKT 224 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTC---EEEEECCTTCCT---TCCCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCccc---ccCCH-----------HH-----------HHHHHHH
Confidence 35799999999999999999999875 799999876521 10000 00 0122344
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeC--CC--eEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN--SG--KLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~--~g--~~i~yd~lvlATG~~~~~ 176 (489)
+++. ++++++++|..++.+.. .+.+. +| .++.+|.+++|+|..|..
T Consensus 225 l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 225 FNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp HHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred HhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 5556 99999999999976543 34443 67 679999999999988753
No 273
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.85 E-value=3e-05 Score=78.94 Aligned_cols=98 Identities=18% Similarity=0.296 Sum_probs=74.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||+|+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vt~v~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 220 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGV---KTTLIYRGKEIL---SRFDQ-----------DM-----------RRGLHAA 220 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCccc---cccCH-----------HH-----------HHHHHHH
Confidence 36789999999999999999999875 799999876421 10000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC-C--EEE-eCCCeEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEK-Q--TLI-TNSGKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~-~--~v~-~~~g~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++.+++|.+++.+. . .|. +.+|+ +.+|.+|+|+|..|..
T Consensus 221 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 221 MEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp HHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred HHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 778999999999999998753 2 677 78888 9999999999988753
No 274
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.85 E-value=1.1e-05 Score=77.46 Aligned_cols=38 Identities=24% Similarity=0.405 Sum_probs=32.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
.+||+|||||++|++||..|++.+. ..+|+|+|+.+..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~-g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRP-DLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCT-TSCEEEECSSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCC-CCeEEEEecCccc
Confidence 4699999999999999999999821 2379999997654
No 275
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.85 E-value=3e-05 Score=79.57 Aligned_cols=101 Identities=18% Similarity=0.258 Sum_probs=72.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCC-CCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMA-DGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~-~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
.++|+|||||+.|+.+|..|++.+.+ ..+|+++++.+.. ..+ .+ + ..+ .....+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~-~~~------~l-~-----~~~-----------~~~~~~~ 235 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN-MGK------IL-P-----EYL-----------SNWTMEK 235 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST-TTT------TS-C-----HHH-----------HHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc-ccc------cC-C-----HHH-----------HHHHHHH
Confidence 57899999999999999999874310 2479999876431 000 00 0 000 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
+++.|++++++++|.+++.+.. .+.+.+|+++.+|.+|+|+|..|.
T Consensus 236 l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 236 VRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 7788999999999999975433 577889999999999999998875
No 276
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.84 E-value=3e-05 Score=79.14 Aligned_cols=99 Identities=15% Similarity=0.282 Sum_probs=73.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||+|+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l---~~~~~-----------~~-----------~~~l~~~ 230 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGA---EVTVLEAMDKFL---PAVDE-----------QV-----------AKEAQKI 230 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSS---TTSCH-----------HH-----------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEecCCCcC---cccCH-----------HH-----------HHHHHHH
Confidence 45789999999999999999999875 799999876421 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCCC---eEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSG---KLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~g---~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++++++|.+++.+.. .+.+.++ .++.+|.+++|+|..|..
T Consensus 231 l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 231 LTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp HHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred HHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 7788999999999999986543 4555544 679999999999988753
No 277
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.84 E-value=0.0001 Score=73.12 Aligned_cols=60 Identities=23% Similarity=0.367 Sum_probs=44.0
Q ss_pred HHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcC
Q 011267 253 QRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVG 317 (489)
Q Consensus 253 ~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~g 317 (489)
..+.+.+++.|+++++ ++.|+++..++ +.+ .|.+.+| ++.||.||+|+|.... .+++.++
T Consensus 157 ~~l~~~a~~~Gv~i~~-~~~V~~i~~~~-~~v-~v~t~~g-~i~a~~VV~A~G~~s~-~l~~~~g 216 (397)
T 2oln_A 157 AALFTLAQAAGATLRA-GETVTELVPDA-DGV-SVTTDRG-TYRAGKVVLACGPYTN-DLLEPLG 216 (397)
T ss_dssp HHHHHHHHHTTCEEEE-SCCEEEEEEET-TEE-EEEESSC-EEEEEEEEECCGGGHH-HHHGGGT
T ss_pred HHHHHHHHHcCCEEEC-CCEEEEEEEcC-CeE-EEEECCC-EEEcCEEEEcCCcChH-HHhhhcC
Confidence 3455666778999999 99999998643 334 4666665 7999999999998743 4555544
No 278
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.83 E-value=8.8e-06 Score=83.85 Aligned_cols=53 Identities=17% Similarity=0.295 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCC
Q 011267 249 PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 306 (489)
Q Consensus 249 ~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~ 306 (489)
..+.+.+.+.+++.|+++++ ++.|++|..+ ++ .+++.+|+++.||.||+++-.
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~-~~~V~~I~~~-~~---~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGE-KGKVTKVNAN-NK---TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESG-GGCEEEEETT-TT---EEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHhcCeeeec-ceEEEEEEcc-CC---EEEEcCCCEEECCEEEECCCH
Confidence 35667777888889999999 9999999843 33 467899999999999998653
No 279
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.82 E-value=6.2e-05 Score=82.34 Aligned_cols=64 Identities=25% Similarity=0.345 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCCchhhhcCC
Q 011267 251 LAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 251 ~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl 318 (489)
+...+.+.+++.|++++. ++.|+++... ++.+..|.+.+| ++.||.||+|+|.... .+++..|+
T Consensus 153 l~~~L~~~a~~~Gv~i~~-~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~-~l~~~~g~ 216 (830)
T 1pj5_A 153 AVQLLIKRTESAGVTYRG-STTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWGA-KIGAMIGM 216 (830)
T ss_dssp HHHHHHHHHHHTTCEEEC-SCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGHH-HHHHTTTC
T ss_pred HHHHHHHHHHHcCCEEEC-CceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccchH-HHHHHhCC
Confidence 445566777889999999 9999999864 456667888877 7999999999998753 44444443
No 280
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.82 E-value=1.7e-05 Score=81.14 Aligned_cols=97 Identities=13% Similarity=0.154 Sum_probs=70.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
...+++|||||+.|+.+|..|++.|. +|+++++....+. +.. .+ .....+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~l~~----~d~-----------~~-----------~~~l~~~ 236 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGY---EPTVMVRSIVLRG----FDQ-----------QM-----------AELVAAS 236 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSCSSTT----SCH-----------HH-----------HHHHHHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCCCCcc----cCH-----------HH-----------HHHHHHH
Confidence 35689999999999999999999875 7999987422110 000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC---CEEEeCCCe-----EEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEK---QTLITNSGK-----LLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~---~~v~~~~g~-----~i~yd~lvlATG~~~~ 175 (489)
+++.|++++.+++|.+++... ..+.+.++. ++.+|.+++|+|..|.
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 237 MEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred HHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 778899999999999987532 246665543 7899999999998775
No 281
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.81 E-value=6.9e-05 Score=74.89 Aligned_cols=99 Identities=17% Similarity=0.230 Sum_probs=73.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCc-EEEEccCCcchh---------hh------------------------------
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLD-TTIIFPENHLLQ---------RL------------------------------ 246 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~-V~lv~~~~~~l~---------~~------------------------------ 246 (489)
..+|+|||||+.|+.+|..|++.|.+ |+++++.+.+.+ +.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35799999999999999999999999 999998753210 00
Q ss_pred ---------------------hCHHHHHHHHHHHHh-cC-cEEEEcCceEEEEEeCCCCcEEEEEeCC---C--cEEEcC
Q 011267 247 ---------------------FTPSLAQRYEQLYQQ-NG-VKFVKVGASIKNLEAGSDGRVAAVKLED---G--STIDAD 298 (489)
Q Consensus 247 ---------------------~~~~~~~~l~~~l~~-~G-v~~~~~~~~v~~i~~~~~~~v~~v~~~~---g--~~i~aD 298 (489)
....+.+.+.+.+++ .| +++++ +++|+++.. +++ + .+.+.+ | +++.||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~-~~~v~~i~~-~~~-v-~v~~~~~~~g~~~~~~ad 159 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRT-GLGVERIEE-RDG-R-VLIGARDGHGKPQALGAD 159 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEE-SEEEEEEEE-ETT-E-EEEEEEETTSCEEEEEES
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEE-CCEEEEEec-CCc-c-EEEEecCCCCCceEEecC
Confidence 001344556666665 36 68999 999999986 443 3 355554 7 579999
Q ss_pred EEEEccCCCCC
Q 011267 299 TIVIGIGAKPT 309 (489)
Q Consensus 299 ~vi~a~G~~p~ 309 (489)
.||.|.|....
T Consensus 160 ~vV~AdG~~S~ 170 (410)
T 3c96_A 160 VLVGADGIHSA 170 (410)
T ss_dssp EEEECCCTTCH
T ss_pred EEEECCCccch
Confidence 99999998764
No 282
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.80 E-value=0.00013 Score=75.18 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=45.8
Q ss_pred HHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 253 QRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 253 ~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
..+.+.+++.|++++. + +|+++..++++.+..|++.+|+++.||.||.|+|....
T Consensus 177 ~~L~~~a~~~gv~~~~-~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 177 RYLSEYAIARGVRHVV-D-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHTTCEEEE-C-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEE-C-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4455666778999999 8 99999876667777889999988999999999998764
No 283
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.80 E-value=2.9e-05 Score=79.67 Aligned_cols=99 Identities=17% Similarity=0.240 Sum_probs=72.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
..++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~l~~~ 248 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGA---KVTVVEFLDTIL---GGMDG-----------EV-----------AKQLQRM 248 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSS---SSSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEecccccc---ccCCH-----------HH-----------HHHHHHH
Confidence 45789999999999999999999875 799998776421 00000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCCC--EEEeCC---C--eEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNS---G--KLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~--~v~~~~---g--~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++.+++|.+++.+.. .+.+.+ | .++.+|.+|+|||..|..
T Consensus 249 l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp HHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred HHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 7788999999999999876543 344442 4 579999999999988753
No 284
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.79 E-value=0.00013 Score=74.82 Aligned_cols=100 Identities=18% Similarity=0.272 Sum_probs=77.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch----------------------hhh-----------------
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL----------------------QRL----------------- 246 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l----------------------~~~----------------- 246 (489)
...+|+|||+|+.|+-+|..|++.|.+|+++++.+.+. ...
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 45679999999999999999999999999999763210 000
Q ss_pred -------------h-CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCc---EEEcCEEEEccCCCC
Q 011267 247 -------------F-TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 308 (489)
Q Consensus 247 -------------~-~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~---~i~aD~vi~a~G~~p 308 (489)
+ ...+.+.+.+.+++.|+++++ +++|++++.+++ .+ .|++.++. ++.||.||.|.|...
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~-~~~v~~i~~~~~-~v-~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLR-GHTVRALTDEGD-HV-VVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEE-SCEEEEEEECSS-CE-EEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEc-CCEEEEEEEeCC-EE-EEEEEcCCCcEEEEeCEEEEccCccc
Confidence 0 134556677778888999999 999999986544 34 46777764 799999999999865
No 285
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.77 E-value=3.5e-05 Score=78.79 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=71.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
.++++|||||+.|+.+|..|++.|. +|+++++.+... +.+.. .+ .....+.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l---~~~d~-----------~~-----------~~~~~~~l 238 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGS---KTSLMIRHDKVL---RSFDS-----------MI-----------STNCTEEL 238 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC---TTSCH-----------HH-----------HHHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCC---eEEEEEeCCccc---cccCH-----------HH-----------HHHHHHHH
Confidence 5789999999999999999999875 799999865421 10000 00 01234567
Q ss_pred HHCCcEEEeCCcEEEEeCCC----CEEEeCC-------CeEEeeCcEEecCCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDIEK----QTLITNS-------GKLLKYGSLIVATGCTASR 176 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~~----~~v~~~~-------g~~i~yd~lvlATG~~~~~ 176 (489)
++.|++++.+++|.+++... ..+.+.+ |.++.+|.+++|+|..|..
T Consensus 239 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 239 ENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp HHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 78899999999999987542 2455654 2678999999999988753
No 286
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.77 E-value=3.3e-05 Score=79.12 Aligned_cols=97 Identities=12% Similarity=0.157 Sum_probs=69.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
...+++|||||+.|+.+|..|++.|. +|+++++....+ .+.. .+ .....+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~l~----~~d~-----------~~-----------~~~l~~~ 234 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGL---DTTVMMRSIPLR----GFDQ-----------QM-----------SSLVTEH 234 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSST----TSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEcCcccc----cCCH-----------HH-----------HHHHHHH
Confidence 35689999999999999999999875 799998753211 0000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCC-C--CEEEeCC---Ce--EEeeCcEEecCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIE-K--QTLITNS---GK--LLKYGSLIVATGCTAS 175 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~-~--~~v~~~~---g~--~i~yd~lvlATG~~~~ 175 (489)
+++.|+++++++.+..+... . ..+.+.+ |+ ++.+|.+++|+|..|.
T Consensus 235 l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 235 MESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp HHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred HHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 77889999999888888652 2 2455443 55 4789999999998775
No 287
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.76 E-value=2.6e-05 Score=80.04 Aligned_cols=101 Identities=17% Similarity=0.193 Sum_probs=71.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhh-------h--h---CHHHHHHHHHHHHhcCcEEEEcCceEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------L--F---TPSLAQRYEQLYQQNGVKFVKVGASIK 274 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-------~--~---~~~~~~~l~~~l~~~Gv~~~~~~~~v~ 274 (489)
..+|+|||+|+.|+.+|..|++. .+|+++++.+.+... . + ..++...+.+.+ +.|++++. ++.+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~-~~~v~ 184 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYL-ETSAL 184 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEET-TEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEc-CCEEE
Confidence 45799999999999999999999 999999987654110 0 1 123333333434 56999999 99998
Q ss_pred EEEeCCCCcEEEEEeCCCc--EEEcCEEEEccCCCCCCc
Q 011267 275 NLEAGSDGRVAAVKLEDGS--TIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~~~g~--~i~aD~vi~a~G~~p~~~ 311 (489)
++.... ..+.....++++ ++.+|.+|+|+|..|...
T Consensus 185 ~i~~~~-~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 185 GVFDKG-EYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp CCEECS-SSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred EEEcCC-cEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 887543 333222234554 689999999999988643
No 288
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.76 E-value=0.00018 Score=74.33 Aligned_cols=55 Identities=16% Similarity=0.266 Sum_probs=44.5
Q ss_pred HHHHHHHHh-cCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 253 QRYEQLYQQ-NGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 253 ~~l~~~l~~-~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
+.+.+.+++ .|++++. + +|+++..++++.+..|.+.+|+++.||.||.|+|....
T Consensus 179 ~~L~~~a~~~~Gv~i~~-~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIR-D-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHTSCCEEEE-C-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHhcCCCEEEE-e-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 445556666 8999999 8 69999876566666788888878999999999999765
No 289
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.74 E-value=0.00015 Score=74.41 Aligned_cols=101 Identities=20% Similarity=0.221 Sum_probs=77.5
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcch----------------------hhh----------------
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL----------------------QRL---------------- 246 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l----------------------~~~---------------- 246 (489)
....+|+|||+|+.|+-+|..|++.|.+|+++++.+.+. ...
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 445689999999999999999999999999999763210 000
Q ss_pred --------------h-CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCc---EEEcCEEEEccCCCC
Q 011267 247 --------------F-TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGS---TIDADTIVIGIGAKP 308 (489)
Q Consensus 247 --------------~-~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~---~i~aD~vi~a~G~~p 308 (489)
+ ...+.+.+.+.+++.|+++++ +++|++++.+++ .+ .+++.++. ++.+|.||.|.|...
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~-~~~v~~i~~~~~-~v-~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRR-GHEVLSLTDDGA-GV-TVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEE-TCEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECCCTTC
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEEC-CcEEEEEEEcCC-eE-EEEEEcCCCCEEEEeCEEEECCCcch
Confidence 0 124556677778888999999 999999986544 44 46676664 799999999999865
No 290
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.69 E-value=0.00015 Score=80.36 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=72.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhh-------h----CHHHHHHHHHHHHhc-CcEEEEcCceEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-------F----TPSLAQRYEQLYQQN-GVKFVKVGASIK 274 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~-------~----~~~~~~~l~~~l~~~-Gv~~~~~~~~v~ 274 (489)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+.... + ..++...+.+.+.+. +++++. ++.|.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~-~~~V~ 206 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQ-RTTVF 206 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEES-SEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEe-CCEEE
Confidence 4679999999999999999999999999999876442111 1 234444555566664 999999 99999
Q ss_pred EEEeCCCCcEEEEEe---------------CCCcEEEcCEEEEccCCCCCC
Q 011267 275 NLEAGSDGRVAAVKL---------------EDGSTIDADTIVIGIGAKPTV 310 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~---------------~~g~~i~aD~vi~a~G~~p~~ 310 (489)
.+.. ++.+..+.. .++.++.+|.+|+|||..|..
T Consensus 207 ~i~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 207 GSYD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp EEET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred eeec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 8863 333222221 112368999999999998764
No 291
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.64 E-value=2.1e-05 Score=79.99 Aligned_cols=40 Identities=25% Similarity=0.505 Sum_probs=33.9
Q ss_pred cEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCC
Q 011267 264 VKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 306 (489)
Q Consensus 264 v~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~ 306 (489)
+++++ ++.|++|+..+++ + .|++.+|+++.||.||+|+..
T Consensus 248 ~~i~~-~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYK-GTKVTKLSHSGSC-Y-SLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEEC-SCCEEEEEECSSS-E-EEEESSSCEEEESEEEECSCH
T ss_pred CEEEe-CCceEEEEEcCCe-E-EEEECCCCEEECCEEEECCCH
Confidence 68999 9999999875444 3 588899989999999999875
No 292
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.63 E-value=2.6e-05 Score=87.02 Aligned_cols=93 Identities=20% Similarity=0.264 Sum_probs=71.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-cEEEEccCCcchh--------hhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHLLQ--------RLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLE 277 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~-~V~lv~~~~~~l~--------~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~ 277 (489)
+++|+|||+|+.|+.+|..|++.|. +|+++++.+.+.. ..++.+..++..+.+++.||++++ ++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~-~~~v~~-- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIIC-GKSLSE-- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEE-SCCBST--
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEc-ccEecc--
Confidence 5689999999999999999999999 7999998765421 113455666677888999999999 876621
Q ss_pred eCCCCcEEEEEeCCCcEEEcCEEEEccCC-CCC
Q 011267 278 AGSDGRVAAVKLEDGSTIDADTIVIGIGA-KPT 309 (489)
Q Consensus 278 ~~~~~~v~~v~~~~g~~i~aD~vi~a~G~-~p~ 309 (489)
. .+.+++++++.+|.||+|||. +|.
T Consensus 264 ----~---~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ----N---EITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ----T---SBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred ----c---eEEhhhcCccCCCEEEEecCCCCCC
Confidence 1 134455556789999999998 475
No 293
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.62 E-value=0.00034 Score=71.84 Aligned_cols=60 Identities=15% Similarity=0.182 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEccCCCCCCchhh
Q 011267 251 LAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKPTVSPFE 314 (489)
Q Consensus 251 ~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~aD~vi~a~G~~p~~~~~~ 314 (489)
+...+.+.+++.|+++++ +++|+++..++ .+..|.+ .+|+ ++.||.||.|+|.... .++.
T Consensus 151 l~~~l~~~a~~~Gv~i~~-~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~-~l~~ 215 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLT-RTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK-QFFD 215 (501)
T ss_dssp HHHHHHHHHHHTTCEEEC-SEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHH-HHHH
T ss_pred HHHHHHHHHHHcCCEEEc-CcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHH-HHHH
Confidence 445566777788999999 99999998643 4556776 3565 7999999999998764 3443
No 294
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.60 E-value=2.2e-05 Score=79.67 Aligned_cols=91 Identities=14% Similarity=0.184 Sum_probs=69.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCC--CcEEEEccCCcch--------hh-hhCHHHHHHHHHHHHhcCcEEEEcCceEE
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLL--------QR-LFTPSLAQRYEQLYQQNGVKFVKVGASIK 274 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g--~~V~lv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~ 274 (489)
...+++|||+|+.|+.+|..|.+.| .+|+++++.+.+. +. .....+...+.+.+++.||+++. ++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~-~~~v~ 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYG-NVEVG 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEB-SCCBT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEe-eeEEe
Confidence 3578999999999999999999988 8999999887653 11 11235666778888899999999 87651
Q ss_pred EEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCC
Q 011267 275 NLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKP 308 (489)
Q Consensus 275 ~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p 308 (489)
. .|.+++. ++.+|.||+|||..|
T Consensus 84 -------~---~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 -------R---DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp -------T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred -------e---EEEeccc-eEEcCEEEEecCcCC
Confidence 1 1333333 478999999999985
No 295
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.60 E-value=5.2e-05 Score=74.39 Aligned_cols=36 Identities=17% Similarity=0.372 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
++++||+|||||++|+++|++|++.|. +|+|||++.
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~---~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGY---SVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---EEEEEeccC
Confidence 356899999999999999999999886 799999875
No 296
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.60 E-value=9.3e-05 Score=78.93 Aligned_cols=87 Identities=17% Similarity=0.292 Sum_probs=66.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh-----hhhC-----HHHHHHHHHHHHhcCcEEEEcCceEEEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-----RLFT-----PSLAQRYEQLYQQNGVKFVKVGASIKNL 276 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~-----~~~~-----~~~~~~l~~~l~~~Gv~~~~~~~~v~~i 276 (489)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. ..++ .+....+.+.+++.||++++ ++.++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~-~~~v~~- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKL-NHTVTA- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEE-SCCCCS-
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEe-CcEecH-
Confidence 46899999999999999999999999999998764411 1111 23445667778889999999 775421
Q ss_pred EeCCCCcEEEEEeCCCcEE-EcCEEEEccCCCCCCc
Q 011267 277 EAGSDGRVAAVKLEDGSTI-DADTIVIGIGAKPTVS 311 (489)
Q Consensus 277 ~~~~~~~v~~v~~~~g~~i-~aD~vi~a~G~~p~~~ 311 (489)
..+ .+|.||+|||.+|...
T Consensus 451 ----------------~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 ----------------DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ----------------SSSCCSSEEEECCCEEECCC
T ss_pred ----------------HHhhcCCEEEEccCCCcCCC
Confidence 123 8999999999988754
No 297
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.60 E-value=9.7e-05 Score=76.23 Aligned_cols=98 Identities=15% Similarity=0.227 Sum_probs=66.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
...+++|||||+.|+.+|..|++.|. +|+++++....+ .+.. .+ .....+.
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~l~----~~d~-----------~~-----------~~~~~~~ 259 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGL---DVTVMVRSILLR----GFDQ-----------DM-----------ANKIGEH 259 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSST----TSCH-----------HH-----------HHHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCC---eEEEEecccccc----cCCH-----------HH-----------HHHHHHH
Confidence 34679999999999999999999875 799998742111 0000 00 0123456
Q ss_pred HHHCCcEEEeCCcEEEEeCCC----C--EEE--eCCC---eEEeeCcEEecCCCCCCC
Q 011267 130 YKEKGIEMIYQDPVTSIDIEK----Q--TLI--TNSG---KLLKYGSLIVATGCTASR 176 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~----~--~v~--~~~g---~~i~yd~lvlATG~~~~~ 176 (489)
+++.|++++.+.++..+.... . .+. ..+| .++.+|.+++|+|..|..
T Consensus 260 l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~ 317 (519)
T 3qfa_A 260 MEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACT 317 (519)
T ss_dssp HHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESC
T ss_pred HHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccC
Confidence 788899999987766664311 2 232 2455 257899999999988753
No 298
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.59 E-value=0.00059 Score=71.39 Aligned_cols=53 Identities=21% Similarity=0.217 Sum_probs=41.0
Q ss_pred HHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEccCCC
Q 011267 254 RYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAK 307 (489)
Q Consensus 254 ~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~aD~vi~a~G~~ 307 (489)
.+.+.+++.||+++. ++.|+++..++++++.+|.. .+|+ ++.|+.||+|+|..
T Consensus 148 ~L~~~~~~~gv~i~~-~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 148 TLYQQNLKNHTTIFS-EWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHTTCEEEE-TEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHhCCCEEEe-CcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 345556677999999 99999998644577777765 4565 58999999999974
No 299
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.57 E-value=5.1e-05 Score=77.39 Aligned_cols=54 Identities=28% Similarity=0.426 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCC
Q 011267 250 SLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 306 (489)
Q Consensus 250 ~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~ 306 (489)
.+.+.+.+.+++.|+++++ ++.|++|...+++ +..|.+ ++.++.||.||+|++.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~-~~~V~~i~~~~~~-~~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLR-GQPVCGLSLQAEG-RWKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEEC-SCCCCEEEECGGG-CEEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEe-CCEEEEEEEcCCc-eEEEEE-CCeEEEcCEEEECCCH
Confidence 5677888889999999999 9999999865433 235655 4557999999999875
No 300
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.56 E-value=4.7e-05 Score=76.68 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=31.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+++||+|||||++|+++|..|++.|+ +|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~---~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDV---DVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTC---EEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC---eEEEEcCCC
Confidence 45799999999999999999999987 799999876
No 301
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.55 E-value=7.8e-05 Score=73.21 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=34.5
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC-CCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE-AYA 89 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~-~~~ 89 (489)
....+||+|||||++||+||+.|++.|+ +|+|+|++ +..
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~---~V~VlE~~~~~v 80 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGH---DVTILEANANRV 80 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSC---EEEEECSCSSCC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCC---cEEEEecccccc
Confidence 3457899999999999999999999986 79999998 654
No 302
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.54 E-value=0.00029 Score=71.73 Aligned_cols=98 Identities=17% Similarity=0.266 Sum_probs=71.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc-------------hhh------------------------------
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-------------LQR------------------------------ 245 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~-------------l~~------------------------------ 245 (489)
.|+|||+|..|+-+|..|++.|.+|+++++...- +..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 3799999999999999999999999999876100 000
Q ss_pred -----------------------------------hhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC
Q 011267 246 -----------------------------------LFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE 290 (489)
Q Consensus 246 -----------------------------------~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~ 290 (489)
.....+...+.+.+++.||+++. ++.+ ++..+ ++++.++...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~-~~~v-~l~~~-~~~v~Gv~v~ 157 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIE-DRLV-EIRVK-DGKVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEEC-CCEE-EEEEE-TTEEEEEEET
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEE-CcEE-EEEEe-CCEEEEEEEE
Confidence 00113345556666778999999 9999 98753 4666666653
Q ss_pred -CCcEEEcCEEEEccCCCCC
Q 011267 291 -DGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 291 -~g~~i~aD~vi~a~G~~p~ 309 (489)
++.++.+|.||+|+|..+.
T Consensus 158 ~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 158 KRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp TTEEECCCSEEEECCCCCGG
T ss_pred eCCCeEEeeeEEECCCCCcc
Confidence 2335789999999998764
No 303
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.53 E-value=4.6e-05 Score=78.69 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=34.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcC-CCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g-~~~~~V~li~~~~~~~ 90 (489)
++.+||+|||||+|||+||..|++.| + +|+|+|+++..+
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~---~V~VlEa~~riG 45 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQ---DCLVLEARDRVG 45 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCC---SEEEECSSSSSB
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCC---CEEEEeCCCCCC
Confidence 34579999999999999999999998 5 799999987654
No 304
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.53 E-value=8.7e-05 Score=74.39 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=34.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcC-CCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g-~~~~~V~li~~~~~~~ 90 (489)
++++||+|||||++||+||..|++.| . +|+|+|+++...
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~---~v~v~E~~~~~G 43 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFH---DYTILERTDHVG 43 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCC---CEEEECSSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCC---cEEEEECCCCCC
Confidence 35689999999999999999999998 5 799999987754
No 305
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.52 E-value=2.4e-05 Score=79.34 Aligned_cols=89 Identities=15% Similarity=0.203 Sum_probs=68.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHh-C------CCcEEEEccCCcchhh---------hhCHHHHHHHHHHHHhcCcEEEEcC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVG-W------KLDTTIIFPENHLLQR---------LFTPSLAQRYEQLYQQNGVKFVKVG 270 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~-~------g~~V~lv~~~~~~l~~---------~~~~~~~~~l~~~l~~~Gv~~~~~~ 270 (489)
..+|+|||+|+.|+.+|..|.+ . +.+|+++++.+.+... ....++...+.+.+++.||+++. +
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~-~ 81 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFG-N 81 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEE-S
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEe-e
Confidence 4689999999999999999999 7 8999999988654311 12235666777888889999999 7
Q ss_pred ceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 271 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 271 ~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
..+ . . .|.++++ ++.+|.||+|+|..
T Consensus 82 v~v-----~--~---~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 82 VVV-----G--E---HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CCB-----T--T---TBCHHHH-HHHSSEEEECCCCC
T ss_pred EEE-----C--C---EEEECCC-eEeCCEEEEeeCCC
Confidence 543 1 1 1444555 47899999999997
No 306
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.51 E-value=9e-05 Score=75.12 Aligned_cols=59 Identities=19% Similarity=0.228 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCC-CCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 249 PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGS-DGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 249 ~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~-~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
..+.+.+.+.+++.|+++++ ++.|++|.... ++++..|++ +|+++.||.||+++|..|.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~-~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYML-DTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEEC-SCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEEC-CCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 36777888889999999999 99999998642 566667776 5778999999999998864
No 307
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.51 E-value=0.00011 Score=78.51 Aligned_cols=99 Identities=13% Similarity=0.176 Sum_probs=72.8
Q ss_pred CCCcEEEEc--CchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 50 ENREFVIVG--GGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 50 ~~~~vvIIG--gG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
..++|+||| +|..|+.+|..|++.|. +|++++..+...- ...+ . .. .....
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~---~Vtlv~~~~~l~~--------~~~~--~---~~-----------~~~l~ 574 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGY---EVSIVTPGAQVSS--------WTNN--T---FE-----------VNRIQ 574 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTC---EEEEEESSSSTTG--------GGGG--G---TC-----------HHHHH
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCC---eeEEEeccccccc--------cccc--c---hh-----------HHHHH
Confidence 456799999 99999999999999875 7999987654210 0000 0 00 01235
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCCEEEe---CCCeEEeeCcEEecCCCCCC
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEKQTLIT---NSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~~~v~~---~~g~~i~yd~lvlATG~~~~ 175 (489)
+.+++.|++++.+++|.+++.+...+.. .++.++.+|.+|+|+|..|.
T Consensus 575 ~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 575 RRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp HHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred HHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 6678899999999999999987655553 25668999999999998764
No 308
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.51 E-value=5.5e-05 Score=75.13 Aligned_cols=35 Identities=26% Similarity=0.522 Sum_probs=32.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
.+||+|||||++|+++|++|++.|. +|+|||+...
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~---~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGH---RVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCC
Confidence 4799999999999999999999987 6999999764
No 309
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.49 E-value=5.3e-05 Score=76.69 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=33.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
.++||+|||||++||+||..|++.|+ +|+|+|+++...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGL---SVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---cEEEEECCCCCC
Confidence 45799999999999999999999986 699999987653
No 310
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.46 E-value=0.00018 Score=75.72 Aligned_cols=96 Identities=11% Similarity=0.221 Sum_probs=65.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhHH
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (489)
..+++|||||..|+.+|..|++.|. +|+++++.... +.+.. .+ .....+.+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~l----~~~d~-----------~~-----------~~~~~~~l 336 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGG---DVTVMVRSILL----RGFDQ-----------QM-----------AEKVGDYM 336 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSS----TTSCH-----------HH-----------HHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---EEEEEECCcCc----CcCCH-----------HH-----------HHHHHHHH
Confidence 4589999999999999999999975 69999875211 00000 00 01234556
Q ss_pred HHCCcEEEeCCcEEEEeC-------C--CCE--EE--eCCCeEEe--eCcEEecCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDI-------E--KQT--LI--TNSGKLLK--YGSLIVATGCTAS 175 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~-------~--~~~--v~--~~~g~~i~--yd~lvlATG~~~~ 175 (489)
++.|++++.++.+..+.. . ... +. ..+|+++. +|.+++|+|..|.
T Consensus 337 ~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 337 ENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp HHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEEC
T ss_pred HhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccc
Confidence 788999999877766632 1 122 22 35776655 9999999998875
No 311
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.45 E-value=0.00011 Score=73.09 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=34.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc-CCCCCcEEEEcCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAP 90 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~-g~~~~~V~li~~~~~~~ 90 (489)
.++||+|||||++|++||..|++. |. +|+|+|+++..+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~---~v~v~E~~~~~G 44 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDK---RVLVLERRPHIG 44 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCC---CEEEECSSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCC---CEEEEeCCCCCC
Confidence 368999999999999999999998 76 799999987654
No 312
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.43 E-value=0.00012 Score=74.85 Aligned_cols=39 Identities=18% Similarity=0.353 Sum_probs=34.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
++.+||+|||||+|||+||+.|++.|+ +|+|+|+.+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~---~v~v~E~~~~~G 47 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGY---KVTVLEARTRPG 47 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeccCCCC
Confidence 456899999999999999999999986 799999987654
No 313
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.43 E-value=9.2e-05 Score=75.48 Aligned_cols=40 Identities=18% Similarity=0.244 Sum_probs=33.0
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
....+||+|||||++|++||..|++.|+ +|+|+|+++...
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~---~v~v~E~~~~~G 52 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGT---DAVLLESSARLG 52 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTC---CEEEECSSSSSB
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCCC
Confidence 3457899999999999999999999987 799999987653
No 314
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.43 E-value=0.00012 Score=72.40 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=34.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
...+||+|||||++|+++|..|++.|. +|+|+|+.+...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~---~v~v~E~~~~~G 65 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQ---RVLIVDRRPHIG 65 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCC---ceEEEeccCCCC
Confidence 456899999999999999999999876 699999987654
No 315
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.42 E-value=0.00011 Score=74.99 Aligned_cols=41 Identities=22% Similarity=0.141 Sum_probs=34.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
|+++||+|||||++|++||++|++.|. +.+|+|+|+++...
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~-~~~v~v~E~~~~~G 42 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFP-DLNITLLEAGERLG 42 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCT-TSEEEEECSSSSSB
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCC-CCCEEEEECCCCCC
Confidence 346899999999999999999999982 35899999976643
No 316
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.41 E-value=0.00077 Score=70.67 Aligned_cols=97 Identities=19% Similarity=0.240 Sum_probs=71.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC--CcEEEEccCCcchh------------------------hh---------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQ------------------------RL--------------- 246 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g--~~V~lv~~~~~~l~------------------------~~--------------- 246 (489)
..|+|||+|..|+-+|..|++.| .+|+++++.+.... ..
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 46999999999999999999999 99999987532100 00
Q ss_pred ------------------h----------------------------CHHHHHHHHHHHHhcC-cEEEEcCceEEEEEeC
Q 011267 247 ------------------F----------------------------TPSLAQRYEQLYQQNG-VKFVKVGASIKNLEAG 279 (489)
Q Consensus 247 ------------------~----------------------------~~~~~~~l~~~l~~~G-v~~~~~~~~v~~i~~~ 279 (489)
| +..+...+.+.+++.| |+++. ++.++++..+
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~-~~~v~~l~~~ 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFD-EHFVLDILVD 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEE-TEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEe-CCEEEEEEEe
Confidence 0 0123344555566678 99999 9999999854
Q ss_pred CCCcEEEEEe---CCCc--EEEcCEEEEccCC
Q 011267 280 SDGRVAAVKL---EDGS--TIDADTIVIGIGA 306 (489)
Q Consensus 280 ~~~~v~~v~~---~~g~--~i~aD~vi~a~G~ 306 (489)
++++.+|.. .+|+ ++.|+.||+|+|.
T Consensus 165 -~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 165 -DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp -TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred -CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 566666543 5676 6999999999994
No 317
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.32 E-value=0.00066 Score=71.86 Aligned_cols=100 Identities=19% Similarity=0.267 Sum_probs=74.1
Q ss_pred CcEEEECCCHHHHHHHHHHHh-CCCcEEEEccCCcch----------------h--------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFPENHLL----------------Q-------------------------- 244 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~-~g~~V~lv~~~~~~l----------------~-------------------------- 244 (489)
..|+|||+|+.|+-+|..|++ .|.+|+++++.+.+. .
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 479999999999999999999 999999999763210 0
Q ss_pred --h---------------------hhC-HHHHHHHHHHHHhcCc--EEEEcCceEEEEEeCCC--CcEEEEEeC------
Q 011267 245 --R---------------------LFT-PSLAQRYEQLYQQNGV--KFVKVGASIKNLEAGSD--GRVAAVKLE------ 290 (489)
Q Consensus 245 --~---------------------~~~-~~~~~~l~~~l~~~Gv--~~~~~~~~v~~i~~~~~--~~v~~v~~~------ 290 (489)
. .++ ..+.+.+.+.+++.|+ ++++ +++|++++.+++ +....|++.
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~-~~~v~~l~~~~~~~~~~v~v~~~~~~~~~ 191 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHY-ARRVLDVKVDHGAADYPVTVTLERCDAAH 191 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBC-SEEEEEEEECTTCSSCCEEEEEEECSGGG
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEec-CCEEEEEEECCCCCcCCEEEEEEeccccC
Confidence 0 000 2455677788888887 9999 999999986543 222245554
Q ss_pred CC--cEEEcCEEEEccCCCC
Q 011267 291 DG--STIDADTIVIGIGAKP 308 (489)
Q Consensus 291 ~g--~~i~aD~vi~a~G~~p 308 (489)
+| +++.||.||.|.|...
T Consensus 192 ~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 192 AGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TTCEEEEEEEEEEECCCTTC
T ss_pred CCCeEEEEeCEEEECCCcch
Confidence 45 4799999999999754
No 318
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.30 E-value=0.0001 Score=79.19 Aligned_cols=88 Identities=17% Similarity=0.153 Sum_probs=59.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhh-----h-----CHHHHHHHHHHHHhc------CcEEEEcC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-----F-----TPSLAQRYEQLYQQN------GVKFVKVG 270 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~-----~-----~~~~~~~l~~~l~~~------Gv~~~~~~ 270 (489)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.... + -..+.+++.+.++.. ++++.. +
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~-~ 467 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALG-Q 467 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECS-C
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEe-C
Confidence 4689999999999999999999999999999986542110 0 012333333333332 555544 3
Q ss_pred ceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 271 ASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 271 ~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
. .+.++++.++.+|.||+|||..|.
T Consensus 468 ~--------------~v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 468 K--------------PMTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp C--------------CCCHHHHHTSCCSEEEECCCEEEC
T ss_pred e--------------EEehhhccccCCCEEEEcCCCCcc
Confidence 2 133344556889999999999854
No 319
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.28 E-value=0.00019 Score=70.92 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=31.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHc--CCCCCcEEEEcCCCCC
Q 011267 52 REFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~--g~~~~~V~li~~~~~~ 89 (489)
+||+|||||++|+++|..|++. |. +|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~---~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW---AIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS---EEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC---CEEEEECCCCC
Confidence 4899999999999999999998 66 79999998654
No 320
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.27 E-value=0.00014 Score=70.95 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=30.9
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCC---CCCcEEEEcCCC
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGM---ADGRLCIVSKEA 87 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~---~~~~V~li~~~~ 87 (489)
+||+|||||++|+++|++|++.|. +..+|+|||++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 489999999999999999999871 124899999976
No 321
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.27 E-value=0.00018 Score=74.45 Aligned_cols=44 Identities=23% Similarity=0.244 Sum_probs=34.8
Q ss_pred HH-CCcEEEeCCcEEEEeCCC--C--EEEeCCCeEEeeCcEEecCCCCCC
Q 011267 131 KE-KGIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 131 ~~-~~i~~~~~~~V~~id~~~--~--~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
.+ .|++++.+ +|++++.+. . .|.+.+|.++.+|.||.|+|....
T Consensus 186 ~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 186 TQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 45 79999998 699997542 2 566778778999999999998654
No 322
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.26 E-value=0.00013 Score=72.20 Aligned_cols=87 Identities=15% Similarity=0.193 Sum_probs=67.8
Q ss_pred cEEEECCCHHHHHHHHHHHhC--CCcEEEEccCCcc----------------------h-hh------------------
Q 011267 209 KVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL----------------------L-QR------------------ 245 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~--g~~V~lv~~~~~~----------------------l-~~------------------ 245 (489)
+|+|||||+.|+.+|..|++. |.+|+++++.+.+ . ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 689999999999999999999 9999999986543 0 00
Q ss_pred -------------hhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 246 -------------LFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 246 -------------~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
.....+.+.+.+.+++.|+++++ +++|++++.. +++.+|.||.|.|....
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~-~~~v~~i~~~-------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRF-ESPLLEHGEL-------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEET-TCCCCSGGGC-------------CGGGCSEEEECCGGGGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEe-CCEeccchhc-------------ccccCCEEEECCCCCch
Confidence 01145667788888888999999 9988887521 13689999999998653
No 323
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.26 E-value=0.00025 Score=72.51 Aligned_cols=40 Identities=20% Similarity=0.155 Sum_probs=34.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
++++||+|||||++|++||+.|++.|. .+|+|+|+++...
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~--~~v~v~E~~~~~G 46 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGY--KNWHLYECNDTPG 46 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTC--CSEEEEESSSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCC--CCEEEEeCCCCCC
Confidence 456899999999999999999999872 3799999987654
No 324
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.26 E-value=0.00021 Score=70.73 Aligned_cols=38 Identities=21% Similarity=0.443 Sum_probs=33.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
+++||+|||||++|+++|..|++.|. +|+|+|+++...
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~G 39 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGH---QVHIIDQRDHIG 39 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEEecCCcC
Confidence 34799999999999999999999876 799999987654
No 325
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.25 E-value=0.00024 Score=72.74 Aligned_cols=56 Identities=21% Similarity=0.350 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhcC-cEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 249 PSLAQRYEQLYQQNG-VKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 249 ~~~~~~l~~~l~~~G-v~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
..+.+.+.+.+++.| +++++ ++.|++|...++ .+ .|.+.+|+++.||.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~-~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVF-GCPVRSVVNERD-AA-RVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEES-SCCEEEEEECSS-SE-EEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEe-CCEEEEEEEcCC-EE-EEEECCCCEEEcCEEEECCCHH
Confidence 356777888888888 99999 999999986543 34 5788888889999999999953
No 326
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.24 E-value=0.00019 Score=74.67 Aligned_cols=36 Identities=17% Similarity=0.257 Sum_probs=32.6
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
.+||+|||||++|+++|..|++.|. +|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~---~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQV---GHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 5799999999999999999999987 69999998653
No 327
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.24 E-value=0.00073 Score=69.91 Aligned_cols=32 Identities=16% Similarity=0.329 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~ 240 (489)
..|+|||+|..|+-+|..|++ |.+|+++++.+
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 479999999999999999999 99999999874
No 328
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.22 E-value=0.00023 Score=73.03 Aligned_cols=38 Identities=21% Similarity=0.347 Sum_probs=33.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
+.+||+|||||++||+||..|++.|+ +|+|+|+.+...
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~G 49 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGL---NVTVFEAEGKAG 49 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSC---EEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEEeCCCCC
Confidence 46899999999999999999999986 799999987754
No 329
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.21 E-value=0.00019 Score=73.86 Aligned_cols=44 Identities=11% Similarity=0.159 Sum_probs=35.2
Q ss_pred HHCCcEEEeCCcEEEEeCC--C--CEEEeCCCeEEeeCcEEecCCCCCC
Q 011267 131 KEKGIEMIYQDPVTSIDIE--K--QTLITNSGKLLKYGSLIVATGCTAS 175 (489)
Q Consensus 131 ~~~~i~~~~~~~V~~id~~--~--~~v~~~~g~~i~yd~lvlATG~~~~ 175 (489)
.+.|++++.+ +|+++..+ . ..|.+.+|.++.+|.+|.|+|....
T Consensus 184 ~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 184 IARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 4569999998 99999763 2 2467788888999999999998654
No 330
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.19 E-value=0.00023 Score=69.89 Aligned_cols=36 Identities=17% Similarity=0.321 Sum_probs=32.4
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
+||+|||||++|++||..|++.|. +|+|+|+++..+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNK---KVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTC---CEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---cEEEEecCCCCC
Confidence 689999999999999999999876 699999987654
No 331
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.18 E-value=0.0003 Score=72.11 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=34.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
..++||+|||||++|++||..|++.|. +|+|+|+.+...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~---~v~vlE~~~~~g 69 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGH---QVTVLEASERPG 69 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTC---EEEEECSSSSSB
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCCC
Confidence 346899999999999999999999986 799999987643
No 332
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.18 E-value=0.0028 Score=66.01 Aligned_cols=53 Identities=13% Similarity=0.121 Sum_probs=39.7
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeC---CCc--EEEcCEEEEccCCCCC
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTIVIGIGAKPT 309 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~---~g~--~i~aD~vi~a~G~~p~ 309 (489)
+.+.+++.|+++++ +++|+++..+ ++++.+|++. +|+ ++.||.||+|+|....
T Consensus 194 l~~~a~~~Ga~i~~-~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 194 NIKKAAEDGAYLVS-KMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHTTCEEES-SEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred HHHHHHHcCCeEEe-ccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 34455678999999 9999999864 4566667653 343 6999999999997643
No 333
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.16 E-value=0.002 Score=67.57 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=40.0
Q ss_pred HHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEccCCCC
Q 011267 254 RYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAKP 308 (489)
Q Consensus 254 ~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~aD~vi~a~G~~p 308 (489)
.+.+.+++.||+++. ++.++++..+ ++++.+|.. .+|+ .+.|+.||+|+|...
T Consensus 160 ~L~~~~~~~gv~i~~-~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 160 TLYGRSLRYDTSYFV-EYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHTTSCCEEEE-TEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHhCCCEEEE-ceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 344445567899999 9999999853 567777765 4665 689999999999654
No 334
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.14 E-value=0.00039 Score=67.76 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
++||+|||||+||+.||..|++.|. +|+|||+.+.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~---~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGV---PVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCC---cEEEEeccCC
Confidence 3799999999999999999999987 7999998764
No 335
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.12 E-value=0.0027 Score=65.84 Aligned_cols=95 Identities=19% Similarity=0.303 Sum_probs=68.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh-------------------------------------------
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------- 244 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~------------------------------------------- 244 (489)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 4799999999999999999999999999997632100
Q ss_pred -h-h---h---------------------C-HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCC---C--
Q 011267 245 -R-L---F---------------------T-PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLED---G-- 292 (489)
Q Consensus 245 -~-~---~---------------------~-~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~---g-- 292 (489)
. . + + ..+.+.+.+.+++. +++ +++|++++.++++ + .+++.+ |
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~-~~~v~~~~~~~~~-v-~v~~~~~~~G~~ 180 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRT-RSRLDSFEQRDDH-V-RATITDLRTGAT 180 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EEC-SEEEEEEEECSSC-E-EEEEEETTTCCE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---ccc-CcEEEEEEEeCCE-E-EEEEEECCCCCE
Confidence 0 0 0 0 13444556666655 778 9999999865444 3 355544 6
Q ss_pred cEEEcCEEEEccCCCC
Q 011267 293 STIDADTIVIGIGAKP 308 (489)
Q Consensus 293 ~~i~aD~vi~a~G~~p 308 (489)
+++.||.||.|.|...
T Consensus 181 ~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 181 RAVHARYLVACDGASS 196 (549)
T ss_dssp EEEEEEEEEECCCTTC
T ss_pred EEEEeCEEEECCCCCc
Confidence 4799999999999765
No 336
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.09 E-value=0.00028 Score=74.71 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=32.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
..+||||||||.||++||.+|++.|. +|+|||+.+.
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~---~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGL---STIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCC---cEEEEeccCC
Confidence 35799999999999999999999886 6999999753
No 337
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.03 E-value=0.0039 Score=65.91 Aligned_cols=51 Identities=18% Similarity=0.173 Sum_probs=38.7
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEe---CCCc--EEEcCEEEEccCCC
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTIVIGIGAK 307 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~---~~g~--~i~aD~vi~a~G~~ 307 (489)
+.+.+++.||+++. ++.|+++.. +++++.+|.. .+|+ .+.|+.||+|+|..
T Consensus 164 L~~~a~~~gv~i~~-~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 164 VANECLKLGVSIQD-RKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHTCEEEC-SEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHhCCCEEEE-CcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 44455667999999 999999975 3567766655 4675 48999999999954
No 338
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.03 E-value=0.00033 Score=73.34 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=32.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
..+||||||||+||++||.+|++.|. +|+|||+.+.
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~---~V~vlEK~~~ 41 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQ---TCALLSKVFP 41 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC---cEEEEecCCC
Confidence 35799999999999999999999986 7999999753
No 339
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.01 E-value=0.00067 Score=68.20 Aligned_cols=58 Identities=17% Similarity=0.350 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 249 PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 249 ~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
..+.+.+.+.+++.|+++++ ++.|++|... ++++..|. .+|+++.||.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~-~~~V~~I~~~-~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYML-NKPVDDIIME-NGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBC-SCCCCEEEEE-TTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEEC-CCEEEEEEEe-CCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 36777888888889999999 9999999854 45665566 47788999999999998874
No 340
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.99 E-value=0.00037 Score=74.00 Aligned_cols=36 Identities=31% Similarity=0.448 Sum_probs=32.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHH-----cCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVE-----HGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~-----~g~~~~~V~li~~~~~ 88 (489)
+.+||+||||||+|+++|..|++ .|. +|+|||+.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi---~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDL---KVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTC---CEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCC---CEEEEeCCCC
Confidence 35799999999999999999999 887 7999998764
No 341
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.97 E-value=0.00092 Score=68.59 Aligned_cols=32 Identities=22% Similarity=0.188 Sum_probs=29.0
Q ss_pred CcEEEECCCHHHHHHHHHHHh-CCCcEEEEccC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFPE 239 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~-~g~~V~lv~~~ 239 (489)
-.|+|||||+.|+-+|..|++ .|.+|+|++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~ 43 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSN 43 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECC
Confidence 369999999999999999987 59999999977
No 342
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.95 E-value=0.00047 Score=72.40 Aligned_cols=35 Identities=31% Similarity=0.317 Sum_probs=31.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
..+||||||||+||++||.+|++.|. +|+|||+..
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~---~V~vlEK~~ 51 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGF---NTACVTKLF 51 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCC---cEEEEeccC
Confidence 35799999999999999999999986 699999975
No 343
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=96.94 E-value=0.00066 Score=68.62 Aligned_cols=58 Identities=16% Similarity=0.315 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCC
Q 011267 249 PSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAK 307 (489)
Q Consensus 249 ~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~ 307 (489)
..+.+.+.+.+++.|+++++ ++.|++|..++++++.+|++.+|+++.||.||++++..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l-~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFML-NKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEES-SCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEe-CCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 46778888999999999999 99999998645678889999999999999999999988
No 344
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.94 E-value=0.00062 Score=70.99 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=32.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
..+||+|||||++|+++|+.|++.|. +|+|||++.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~---~V~LlE~~~ 65 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGI---KTGLIEMQD 65 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCC
Confidence 46899999999999999999999987 699999875
No 345
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.89 E-value=0.00063 Score=71.94 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=31.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHc------CCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~------g~~~~~V~li~~~~~ 88 (489)
..+||||||||+||++||.+|++. |. +|+|||+...
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~---~V~vleK~~~ 62 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEA---KILLVDKASL 62 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTC---CEEEECSSCT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCC---cEEEEEecCC
Confidence 358999999999999999999997 75 6999999753
No 346
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.89 E-value=0.00074 Score=72.71 Aligned_cols=39 Identities=23% Similarity=0.439 Sum_probs=34.3
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
.+..+||+|||||++|++||..|++.|+ +|+|+|+.+..
T Consensus 333 ~~~~~~v~viG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~ 371 (776)
T 4gut_A 333 DYHNKSVIIIGAGPAGLAAARQLHNFGI---KVTVLEAKDRI 371 (776)
T ss_dssp GGTSCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEecccce
Confidence 3456899999999999999999999987 79999987654
No 347
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.78 E-value=0.00085 Score=70.99 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=31.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHH---H-cCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFV---E-HGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~---~-~g~~~~~V~li~~~~~ 88 (489)
..+||||||||+||++||.+|+ + .|. +|+|||+.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~---~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGL---KVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTC---CEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCC---eEEEEeCcCC
Confidence 3589999999999999999999 5 675 7999999864
No 348
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.77 E-value=0.0012 Score=70.11 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=34.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
...+||+|||||++|++||..|++.|+ +|+|+|+.+..+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~g 143 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGM---DVTLLEARDRVG 143 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTC---EEEEECSSSSSB
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCC---eEEEEecCCCCC
Confidence 456899999999999999999999987 799999987643
No 349
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.74 E-value=0.0082 Score=60.54 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC------CcEEEEccCCcc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWK------LDTTIIFPENHL 242 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g------~~V~lv~~~~~~ 242 (489)
..+|+|||||++|+-+|..|++.| .+|+++++.+++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 357999999999999999999999 899999987544
No 350
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.73 E-value=0.0076 Score=63.68 Aligned_cols=51 Identities=14% Similarity=0.194 Sum_probs=37.9
Q ss_pred HHHHhc-Cc-EEEEcCceEEEEEeCCC--CcEEEEEe---CCCc--EEEcCEEEEccCCCC
Q 011267 257 QLYQQN-GV-KFVKVGASIKNLEAGSD--GRVAAVKL---EDGS--TIDADTIVIGIGAKP 308 (489)
Q Consensus 257 ~~l~~~-Gv-~~~~~~~~v~~i~~~~~--~~v~~v~~---~~g~--~i~aD~vi~a~G~~p 308 (489)
+.+++. || +++. ++.|+++..+++ +++.+|.. .+|+ .+.|+.||+|+|...
T Consensus 159 ~~~~~~~gv~~i~~-~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 159 EAAKMAVGEENIYE-RVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHHCGGGEEC-SEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHhcCCCcEEEe-cCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 344455 89 9999 999999986533 27777664 5665 689999999999653
No 351
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.71 E-value=0.0016 Score=70.79 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=34.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
...++|+|||||++||+||+.|++.|+ +|+|+|+.+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~---~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGM---DVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEEecCcCC
Confidence 456899999999999999999999987 799999987654
No 352
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.66 E-value=0.007 Score=64.19 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHh-----CCCcEEEEccC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVG-----WKLDTTIIFPE 239 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~-----~g~~V~lv~~~ 239 (489)
..|+|||+|+.|+-+|..|++ .|.+|+++++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~ 45 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR 45 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC
Confidence 369999999999999999999 99999999975
No 353
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.62 E-value=0.0099 Score=63.98 Aligned_cols=42 Identities=17% Similarity=0.374 Sum_probs=34.7
Q ss_pred cCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCC
Q 011267 262 NGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 306 (489)
Q Consensus 262 ~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~ 306 (489)
.|+++++ ++.|++|...++ .+ .|++.+|+++.||.||+|+..
T Consensus 542 ~gl~I~l-~t~V~~I~~~~~-~v-~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQL-KSPVQCIDYSGD-EV-QVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEES-SCCEEEEECSSS-SE-EEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEc-CCeeEEEEEcCC-EE-EEEECCCcEEEcCEEEECCCH
Confidence 3789999 999999986544 44 588889989999999999853
No 354
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.58 E-value=0.0018 Score=65.71 Aligned_cols=54 Identities=19% Similarity=0.311 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhc--------CcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCC
Q 011267 250 SLAQRYEQLYQQN--------GVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGA 306 (489)
Q Consensus 250 ~~~~~l~~~l~~~--------Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~ 306 (489)
.+.+.+.+.+.+. |.++++ ++.|++|...+ +.+ .|++.+|+++.||.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~-~~~V~~i~~~~-~~v-~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQL-NKVVREIKYSP-GGV-TVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEES-SCCEEEEEECS-SCE-EEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEc-CCEEEEEEEcC-CcE-EEEECCCCEEEcCEEEEecCH
Confidence 3444555555443 678999 99999998654 444 488899989999999999874
No 355
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.54 E-value=0.0017 Score=67.28 Aligned_cols=64 Identities=16% Similarity=0.272 Sum_probs=48.2
Q ss_pred HHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCC---Cc--EE---EcCEEEEccCCCCCCchhhhcCCe
Q 011267 254 RYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLED---GS--TI---DADTIVIGIGAKPTVSPFERVGLN 319 (489)
Q Consensus 254 ~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i---~aD~vi~a~G~~p~~~~~~~~gl~ 319 (489)
.+....++.|+++++ ++.|++|..+ ++++.+|++.+ |+ ++ .++.||+|+|......+|..+|+.
T Consensus 201 ~l~~~~~~~~~~i~~-~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 201 YLQTALARPNFTFKT-NVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp HHHHHHTCTTEEEEC-SCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred HHHHHhhCCCcEEEe-CCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 444444456999999 9999999864 46788888865 53 34 889999999987655777777764
No 356
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.43 E-value=0.0012 Score=68.15 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=43.1
Q ss_pred HHhcCcEEEEcCceEEEEEeCCC--CcEEEEEeC--CCc--EE---EcCEEEEccCCCCCCchhhhcCC
Q 011267 259 YQQNGVKFVKVGASIKNLEAGSD--GRVAAVKLE--DGS--TI---DADTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 259 l~~~Gv~~~~~~~~v~~i~~~~~--~~v~~v~~~--~g~--~i---~aD~vi~a~G~~p~~~~~~~~gl 318 (489)
.++.|+++++ ++.|+++..+++ +++.+|+.. +|+ ++ .++.||+|+|...+..+|..+|+
T Consensus 204 ~~~~~~~v~~-~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGi 271 (536)
T 1ju2_A 204 GNSNNLRVGV-HASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGV 271 (536)
T ss_dssp SCTTTEEEEE-SCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hcCCCcEEEe-CCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCC
Confidence 4678999999 999999986543 478888874 465 34 57899999997544456655554
No 357
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.40 E-value=0.002 Score=67.06 Aligned_cols=38 Identities=32% Similarity=0.422 Sum_probs=33.4
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
.+.+|+||||||.||+.+|.+|.+.+ ..+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~--~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENP--NVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTST--TSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCC--CCcEEEEecCCC
Confidence 35699999999999999999999875 358999999876
No 358
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.34 E-value=0.002 Score=66.44 Aligned_cols=58 Identities=19% Similarity=0.367 Sum_probs=42.6
Q ss_pred HhcCcEEEEcCceEEEEEeCCCCcEEEEEeCCC---cEEEcCEEEEccCCCCCCchhhhcCCe
Q 011267 260 QQNGVKFVKVGASIKNLEAGSDGRVAAVKLEDG---STIDADTIVIGIGAKPTVSPFERVGLN 319 (489)
Q Consensus 260 ~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g---~~i~aD~vi~a~G~~p~~~~~~~~gl~ 319 (489)
.+.++.++. ++.+.++..+ ++++++|...+. .++.++.||+|.|..-...+|..+|+.
T Consensus 222 ~r~nl~v~~-~~~v~~i~~~-~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~SGig 282 (526)
T 3t37_A 222 GRKNLTILT-GSRVRRLKLE-GNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRSGIG 282 (526)
T ss_dssp TCTTEEEEC-SCEEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHTTEE
T ss_pred CCCCeEEEe-CCEEEEEEec-CCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhccCC
Confidence 456799999 9999999854 566666665432 357899999999976554677777654
No 359
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.34 E-value=0.017 Score=59.03 Aligned_cols=61 Identities=16% Similarity=0.186 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCC------cEEEEEeCCC-----cEEEcCEEEEccCCCCCCc
Q 011267 250 SLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDG------RVAAVKLEDG-----STIDADTIVIGIGAKPTVS 311 (489)
Q Consensus 250 ~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~------~v~~v~~~~g-----~~i~aD~vi~a~G~~p~~~ 311 (489)
++.++++...++.+..+.+ +++|++++..+.+ ....|+..++ +++.|+.||+|+|..|+.+
T Consensus 146 E~~~Yl~~~A~~~~~~vrf-~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAY-GEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEE-SEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCC
T ss_pred HHHHHHHHHHHHcCCceEc-ceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCC
Confidence 5667777777777777888 9999999864432 1345555443 3689999999999988754
No 360
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.32 E-value=0.0017 Score=68.69 Aligned_cols=40 Identities=20% Similarity=0.148 Sum_probs=32.8
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCC-----CCCcEEEEcCCC-CC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGM-----ADGRLCIVSKEA-YA 89 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~-----~~~~V~li~~~~-~~ 89 (489)
..++|+|||||++||+||+.|++.|. +..+|+|+|+.+ ..
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 35789999999999999999999871 013799999987 54
No 361
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.29 E-value=0.0037 Score=57.48 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=31.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
.|+|||+|+.|+.+|..|++.|.+|+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999988754
No 362
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.28 E-value=0.0075 Score=63.73 Aligned_cols=52 Identities=13% Similarity=0.201 Sum_probs=37.7
Q ss_pred HHHHHHhc--CcEEEEcCceEEEEEeCCC--CcEEEEEe---CCCc--EEEcCEEEEccCCC
Q 011267 255 YEQLYQQN--GVKFVKVGASIKNLEAGSD--GRVAAVKL---EDGS--TIDADTIVIGIGAK 307 (489)
Q Consensus 255 l~~~l~~~--Gv~~~~~~~~v~~i~~~~~--~~v~~v~~---~~g~--~i~aD~vi~a~G~~ 307 (489)
+.+.+++. ||+++. ++.+.++..+++ +++.+|.. .+|+ .+.|+.||+|||..
T Consensus 172 L~~~a~~~~~gV~i~~-~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~ 232 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIE-RIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGA 232 (662)
T ss_dssp HHHHHHHHHCTTTEEC-SEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHhcCCCcEEEE-ceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcc
Confidence 34445555 899998 889988876544 37877754 3554 58999999999953
No 363
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.13 E-value=0.0032 Score=65.48 Aligned_cols=65 Identities=15% Similarity=0.317 Sum_probs=45.3
Q ss_pred HHHHHHHHhcCcEEEEcCceEEEEEeCC---CCcEEEEEeC--CCc--EEEcC-EEEEccCCCCCCchhhhcCC
Q 011267 253 QRYEQLYQQNGVKFVKVGASIKNLEAGS---DGRVAAVKLE--DGS--TIDAD-TIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 253 ~~l~~~l~~~Gv~~~~~~~~v~~i~~~~---~~~v~~v~~~--~g~--~i~aD-~vi~a~G~~p~~~~~~~~gl 318 (489)
.++...+++.++++++ ++.|++|.-++ ++++++|++. +|+ ++.|. .||+|+|.--...+|..+||
T Consensus 231 ayL~p~~~r~NL~V~t-~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGI 303 (583)
T 3qvp_A 231 EWLLPNYQRPNLQVLT-GQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGI 303 (583)
T ss_dssp HHTTTTTTCTTEEEEC-SCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTB
T ss_pred HHHHHhhcCCCcEEEc-CCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCC
Confidence 3444455678999999 99999997543 5678888875 564 46776 79999997643344444443
No 364
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.01 E-value=0.005 Score=63.08 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=43.6
Q ss_pred HHhc-CcEEEEcCceEEEEEeCCCC-cEEEEEeC--CC-----cEEEcCEEEEccCCCCCCchhhhcC
Q 011267 259 YQQN-GVKFVKVGASIKNLEAGSDG-RVAAVKLE--DG-----STIDADTIVIGIGAKPTVSPFERVG 317 (489)
Q Consensus 259 l~~~-Gv~~~~~~~~v~~i~~~~~~-~v~~v~~~--~g-----~~i~aD~vi~a~G~~p~~~~~~~~g 317 (489)
.+++ ++++++ ++.|++|..++++ ++++|+.. +| .++.|+.||+|+|......+|..+|
T Consensus 231 a~~~~n~~i~~-~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 231 ALGTGKVTIQT-LHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp HHHTTSEEEEE-SEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEe-CCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 3445 599999 9999999866434 78888874 56 3688999999999864446666655
No 365
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.84 E-value=0.0075 Score=61.81 Aligned_cols=62 Identities=10% Similarity=0.145 Sum_probs=44.8
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCCC-cEEEEEeC--CC-----cEEEcCEEEEccCCCCCCchhhhcC
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSDG-RVAAVKLE--DG-----STIDADTIVIGIGAKPTVSPFERVG 317 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~~-~v~~v~~~--~g-----~~i~aD~vi~a~G~~p~~~~~~~~g 317 (489)
+....++.++++++ ++.|++|..++++ ++++|+.. +| .++.|+.||+|+|......+|..+|
T Consensus 233 l~~a~~~~n~~i~~-~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 233 LAQAAATGKLTITT-LHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp HHHHHHTTCEEEEC-SEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEe-CCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 33433444599999 9999999866544 68888874 45 3688999999999864446666655
No 366
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.77 E-value=0.016 Score=58.49 Aligned_cols=40 Identities=15% Similarity=0.305 Sum_probs=35.6
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY 91 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y 91 (489)
++.+||+|||+|++|+++|..|++.|. +|+++|+++..+.
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~---~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGK---KILVLDRNPYYGG 57 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeccCCCCC
Confidence 456899999999999999999999987 6999999987653
No 367
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.75 E-value=0.0075 Score=60.81 Aligned_cols=82 Identities=21% Similarity=0.111 Sum_probs=60.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEE
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVA 285 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~ 285 (489)
.++++.|||.|.+|+-+|..|.++|.+|++.+..+.-. + ...+.|++.|++++. +....++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~----~-----~~~~~L~~~gi~~~~-g~~~~~~--------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE----N-----PTAQSLLEEGIKVVC-GSHPLEL--------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG----C-----HHHHHHHHTTCEEEE-SCCCGGG---------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC----C-----hHHHHHHhCCCEEEE-CCChHHh---------
Confidence 47899999999999999999999999999998765211 1 123467788999988 6431100
Q ss_pred EEEeCCCcEEEcCEEEEccCCCCCCchh
Q 011267 286 AVKLEDGSTIDADTIVIGIGAKPTVSPF 313 (489)
Q Consensus 286 ~v~~~~g~~i~aD~vi~a~G~~p~~~~~ 313 (489)
+. + .+|.||+++|..++.+.+
T Consensus 69 ---~~-~---~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 69 ---LD-E---DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp ---GG-S---CEEEEEECTTSCTTSHHH
T ss_pred ---hc-C---CCCEEEECCcCCCCChhH
Confidence 00 1 178999999998887654
No 368
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.70 E-value=0.0078 Score=62.85 Aligned_cols=63 Identities=13% Similarity=0.231 Sum_probs=45.4
Q ss_pred HHHHHHhcCcEEEEcCceEEEEEeCCC---CcEEEEEeC--CCc--EEEc-CEEEEccCCCCCCchhhhcCC
Q 011267 255 YEQLYQQNGVKFVKVGASIKNLEAGSD---GRVAAVKLE--DGS--TIDA-DTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 255 l~~~l~~~Gv~~~~~~~~v~~i~~~~~---~~v~~v~~~--~g~--~i~a-D~vi~a~G~~p~~~~~~~~gl 318 (489)
+....++.|+++++ ++.|+++..+++ +++.+|+.. +|+ ++.| +.||+|+|......+|..+|+
T Consensus 237 l~~~~~~~nl~i~~-~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGI 307 (587)
T 1gpe_A 237 LLPNYQRSNLEILT-GQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGI 307 (587)
T ss_dssp TTTTTTCTTEEEEE-SCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTE
T ss_pred HHHhhcCCCcEEEc-CCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCC
Confidence 33344567999999 999999975432 477788764 564 5778 899999998755466666655
No 369
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.57 E-value=0.0083 Score=61.24 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
|+|+|||+|+.|+-+|..|++.|.+|+++|+++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 68999999999999999999999999999998765
No 370
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.51 E-value=0.0084 Score=62.01 Aligned_cols=64 Identities=22% Similarity=0.356 Sum_probs=45.9
Q ss_pred HHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEEEeCC---Cc--EEEcC-EEEEccCCCCCCchhhhcCC
Q 011267 254 RYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAVKLED---GS--TIDAD-TIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 254 ~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~---g~--~i~aD-~vi~a~G~~p~~~~~~~~gl 318 (489)
++....++.|+++++ ++.|++|..++++++.+|++.+ |+ ++.|+ .||+|+|......+|..+|+
T Consensus 214 ~l~~a~~~~~~~i~~-~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGi 283 (546)
T 2jbv_A 214 YIHPIVEQENFTLLT-GLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGI 283 (546)
T ss_dssp HTGGGTTCTTEEEEC-SCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred HHHHHhcCCCcEEEe-CCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCC
Confidence 334444467999999 9999999865437788888744 53 68898 99999997433356666554
No 371
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.51 E-value=0.012 Score=56.46 Aligned_cols=81 Identities=23% Similarity=0.233 Sum_probs=59.2
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcE
Q 011267 206 KAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRV 284 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e-~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v 284 (489)
..+++.|||.|-+|+. +|..|.++|.+|++.+..+.. + ..+.|++.|++++. +.....
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~------~-----~~~~L~~~gi~v~~-g~~~~~--------- 61 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP------P-----MSTQLEALGIDVYE-GFDAAQ--------- 61 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT------T-----HHHHHHHTTCEEEE-SCCGGG---------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc------H-----HHHHHHhCCCEEEC-CCCHHH---------
Confidence 3578999999999996 899999999999999876531 1 23457788999988 532100
Q ss_pred EEEEeCCCcEEEcCEEEEccCCCCCCchhh
Q 011267 285 AAVKLEDGSTIDADTIVIGIGAKPTVSPFE 314 (489)
Q Consensus 285 ~~v~~~~g~~i~aD~vi~a~G~~p~~~~~~ 314 (489)
+.. -.+|.||++.|..|+.+.+.
T Consensus 62 ----l~~---~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 62 ----LDE---FKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp ----GGS---CCCSEEEECTTCCTTCHHHH
T ss_pred ----cCC---CCCCEEEECCCcCCCCHHHH
Confidence 000 14799999999998876543
No 372
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.38 E-value=0.0061 Score=63.18 Aligned_cols=65 Identities=15% Similarity=0.235 Sum_probs=44.2
Q ss_pred HHHHHHHHhcCcEEEEcCceEEEEEeC---CC-CcEEEEEeCC--C-c--EEEc-CEEEEccCCCCCCchhhhcCC
Q 011267 253 QRYEQLYQQNGVKFVKVGASIKNLEAG---SD-GRVAAVKLED--G-S--TIDA-DTIVIGIGAKPTVSPFERVGL 318 (489)
Q Consensus 253 ~~l~~~l~~~Gv~~~~~~~~v~~i~~~---~~-~~v~~v~~~~--g-~--~i~a-D~vi~a~G~~p~~~~~~~~gl 318 (489)
.++...+++.++++++ ++.|++|.-+ ++ +++++|++.+ | + ++.| ..||+|.|..-...+|..+||
T Consensus 212 ayL~p~~~r~NL~Vlt-~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGI 286 (566)
T 3fim_B 212 AYLRPAQSRPNLSVLI-NAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGI 286 (566)
T ss_dssp HTHHHHTTCTTEEEES-SCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred HHhhhhccCCCeEEEC-CCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCC
Confidence 4555556678999999 9999999854 13 5677787643 4 3 5677 789999996433245554444
No 373
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.18 E-value=0.024 Score=46.94 Aligned_cols=37 Identities=11% Similarity=0.271 Sum_probs=32.2
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
...+.+|+|||.|.-|...|..|.+.|+ +|+++|+++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~---~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDI---PLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCH
Confidence 3446789999999999999999999887 699999864
No 374
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.98 E-value=0.026 Score=47.52 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=31.6
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
.....+|+|||+|.-|...|..|++.|+ +|+++++++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~---~V~vid~~~ 52 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGH---SVVVVDKNE 52 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 3456789999999999999999999876 799999764
No 375
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.94 E-value=0.017 Score=51.90 Aligned_cols=107 Identities=15% Similarity=0.231 Sum_probs=66.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEE
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVA 285 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~ 285 (489)
.+++++|||||.+|...+..|.+.|.+|+++.+. +.+. +.++.++.+++++. +. +.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~----l~~l~~~~~i~~i~-~~----~~-------- 85 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAE----INEWEAKGQLRVKR-KK----VG-------- 85 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHH----HHHHHHTTSCEEEC-SC----CC--------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHH----HHHHHHcCCcEEEE-CC----CC--------
Confidence 5789999999999999999999999999999764 2333 33444555677665 21 11
Q ss_pred EEEeCCCcEEEcCEEEEccCCCCCCchhhhcCCeecCCcEEeCC----CCCC-CCCCeEEecccc
Q 011267 286 AVKLEDGSTIDADTIVIGIGAKPTVSPFERVGLNSSVGGIQVDG----QFRT-RMPGIFAIGDVA 345 (489)
Q Consensus 286 ~v~~~~g~~i~aD~vi~a~G~~p~~~~~~~~gl~~~~g~i~vd~----~~~t-~~~~Iya~GD~a 345 (489)
.+.--.+|+||.|||.......+... .. .++.||- .+.+ ..|.++--||+.
T Consensus 86 -----~~dL~~adLVIaAT~d~~~N~~I~~~---ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 86 -----EEDLLNVFFIVVATNDQAVNKFVKQH---IK-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp -----GGGSSSCSEEEECCCCTHHHHHHHHH---SC-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred -----HhHhCCCCEEEECCCCHHHHHHHHHH---Hh-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 01012489999999976443332222 11 2444432 2222 457777777665
No 376
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.83 E-value=0.059 Score=51.62 Aligned_cols=35 Identities=17% Similarity=0.119 Sum_probs=29.7
Q ss_pred CCCcEEEEcCchHHHH-HHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGY-AARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~-aA~~L~~~g~~~~~V~li~~~~ 87 (489)
.+++|.|||.|.+|++ +|+.|+++|+ +|++.|...
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~---~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGF---EVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCC---EEEEEcCCC
Confidence 3568999999999997 7888899987 799988754
No 377
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.72 E-value=0.04 Score=46.22 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=30.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
.+.+|+|+|+|..|...+..|.+.|+ +|+++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~---~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ---NVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC---CEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEECC
Confidence 45689999999999999999999886 69999986
No 378
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.50 E-value=0.04 Score=56.10 Aligned_cols=39 Identities=26% Similarity=0.339 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 244 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 244 (489)
...+|+|||+|++|+.+|..|.+.|.+|+++++.+++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357899999999999999999999999999998876543
No 379
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.36 E-value=0.038 Score=54.90 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
++|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 36899999999999999999999999999987654
No 380
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.23 E-value=0.044 Score=45.19 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=30.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
++.+|+|+|+|.-|...|..|.+.|+ +|+++|+++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~---~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK---KVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---eEEEEECCH
Confidence 34689999999999999999999987 699999754
No 381
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=94.16 E-value=0.043 Score=54.48 Aligned_cols=34 Identities=24% Similarity=0.168 Sum_probs=31.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 6899999999999999999999999999998654
No 382
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.92 E-value=0.053 Score=52.40 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~ 240 (489)
.+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999885
No 383
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.89 E-value=0.05 Score=54.09 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
+|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6899999999999999999999999999987654
No 384
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.74 E-value=0.065 Score=53.15 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCC-CcEEEEccCCcc
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHL 242 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g-~~V~lv~~~~~~ 242 (489)
...+|+|||+|..|+-+|..|++.| .+|+++++.+++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4568999999999999999999999 899999987665
No 385
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.72 E-value=0.047 Score=54.52 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~ 240 (489)
.++|+|||||+.|+.+|..|++.|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3689999999999999999999999999999875
No 386
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.71 E-value=0.054 Score=54.70 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--cEEEEccCCcc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHL 242 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~--~V~lv~~~~~~ 242 (489)
++|+|||||.+|+-+|..|++.|. +|+++++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 579999999999999999999999 99999987654
No 387
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.55 E-value=0.077 Score=43.32 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=29.2
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
.+|+|||+|..|...|..|.+.|+ +|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~---~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH---DIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 579999999999999999999876 699998753
No 388
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.55 E-value=0.073 Score=51.95 Aligned_cols=37 Identities=24% Similarity=0.402 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccC-Ccc
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHL 242 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~-~~~ 242 (489)
...+|+|||+|+.|+-+|..|.+.|.+|+++++. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 3578999999999999999999999999999988 543
No 389
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.52 E-value=0.082 Score=55.19 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCC-CcEEEEEeCCCcEEEcCEEEEccCCCCC
Q 011267 248 TPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSD-GRVAAVKLEDGSTIDADTIVIGIGAKPT 309 (489)
Q Consensus 248 ~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~-~~v~~v~~~~g~~i~aD~vi~a~G~~p~ 309 (489)
...+.+.+.+.++..|.++++ ++.|++|..+++ +++.+|++.+|+++.||.||+.....|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l-~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCL-RHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEES-SCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEe-CCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 347778888999999999999 999999976543 7888888888999999999998777664
No 390
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=93.46 E-value=0.068 Score=54.76 Aligned_cols=61 Identities=28% Similarity=0.366 Sum_probs=46.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhh-----------------hCHHHHHHHHHHHHhcCcEEEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-----------------FTPSLAQRYEQLYQQNGVKFVK 268 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~-----------------~~~~~~~~l~~~l~~~Gv~~~~ 268 (489)
..+|+|||+|..|+-+|..|++.|.+|+++++++++..+. +... ...+.+.+++.|++...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~~ 81 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-QNRILRLAKELGLETYK 81 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-CHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-cHHHHHHHHHcCCccee
Confidence 4579999999999999999999999999999987653221 1111 24566778888987654
No 391
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.46 E-value=0.2 Score=41.13 Aligned_cols=77 Identities=14% Similarity=0.188 Sum_probs=51.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAA 286 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~ 286 (489)
.++++|+|.|.+|..+|..|.+.|.+|+++++.+ +.. +.+++.|+.++. +.. .+..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~---------~~~----~~~~~~g~~~i~-gd~-------~~~~--- 62 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR---------TRV----DELRERGVRAVL-GNA-------ANEE--- 62 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH---------HHH----HHHHHTTCEEEE-SCT-------TSHH---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH---------HHH----HHHHHcCCCEEE-CCC-------CCHH---
Confidence 5689999999999999999999999999998763 211 234457888776 310 0000
Q ss_pred EEeCCCcEEEcCEEEEccCCCC
Q 011267 287 VKLEDGSTIDADTIVIGIGAKP 308 (489)
Q Consensus 287 v~~~~g~~i~aD~vi~a~G~~p 308 (489)
+...-+ .-.+|.||++++...
T Consensus 63 ~l~~a~-i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 63 IMQLAH-LECAKWLILTIPNGY 83 (140)
T ss_dssp HHHHTT-GGGCSEEEECCSCHH
T ss_pred HHHhcC-cccCCEEEEECCChH
Confidence 000011 126899999988643
No 392
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.41 E-value=0.075 Score=53.89 Aligned_cols=38 Identities=24% Similarity=0.276 Sum_probs=34.1
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
....+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 34678999999999999999999999999999988654
No 393
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.39 E-value=0.072 Score=41.99 Aligned_cols=35 Identities=11% Similarity=0.201 Sum_probs=29.4
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+++|+|+|+|..|..++..|.+.|. .+|+++++.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~--~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSN--YSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSS--EEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC--ceEEEEeCCH
Confidence 4579999999999999999999871 2798888753
No 394
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=93.39 E-value=0.067 Score=54.74 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CcEEEEccCCc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENH 241 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g-~~V~lv~~~~~ 241 (489)
..+|+|||+|..|+-+|..|.+.| .+|++++++++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~r 43 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 357999999999999999999999 99999997753
No 395
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.33 E-value=0.073 Score=51.99 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~ 240 (489)
.+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 369999999999999999999999999999865
No 396
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.30 E-value=0.45 Score=45.18 Aligned_cols=86 Identities=13% Similarity=0.154 Sum_probs=55.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEE-cCceEEEEEeCCCCcEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVK-VGASIKNLEAGSDGRVAA 286 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~-~~~~v~~i~~~~~~~v~~ 286 (489)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.+ . +.+++.|+.+.. +..... +.+ + .
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~-------------~~i~~~Gl~~~~~~~g~~~-~~~-----~-~ 60 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--Y-------------ETVKAKGIRIRSATLGDYT-FRP-----A-A 60 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--H-------------HHHHHHCEEEEETTTCCEE-ECC-----S-C
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--H-------------HHHHhCCcEEeecCCCcEE-Eee-----e-e
Confidence 479999999999999999999999999998753 0 235566766542 011111 100 0 1
Q ss_pred EEeCCC-cEE-EcCEEEEccCCCCCCchhhhc
Q 011267 287 VKLEDG-STI-DADTIVIGIGAKPTVSPFERV 316 (489)
Q Consensus 287 v~~~~g-~~i-~aD~vi~a~G~~p~~~~~~~~ 316 (489)
+. .+- +.. .+|.||+|+-.....+.++.+
T Consensus 61 ~~-~~~~~~~~~~DlVilavK~~~~~~~l~~l 91 (320)
T 3i83_A 61 VV-RSAAELETKPDCTLLCIKVVEGADRVGLL 91 (320)
T ss_dssp EE-SCGGGCSSCCSEEEECCCCCTTCCHHHHH
T ss_pred eE-CCHHHcCCCCCEEEEecCCCChHHHHHHH
Confidence 11 221 222 689999998877665655554
No 397
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.26 E-value=0.057 Score=54.97 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=57.3
Q ss_pred cCCCcEEEECCCHHHHH-HHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCc
Q 011267 205 EKAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGR 283 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e-~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~ 283 (489)
...+++.|||-|-+|+- +|..|.++|.+|+..+.... + ..+.|++.|++++. +.... .
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~-------~-----~~~~l~~~gi~~~~-g~~~~--------~ 78 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN-------S-----VTQHLTALGAQIYF-HHRPE--------N 78 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC-------H-----HHHHHHHTTCEEES-SCCGG--------G
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC-------H-----HHHHHHHCCCEEEC-CCCHH--------H
Confidence 34689999999999996 89999999999999986532 1 12457888999987 52110 0
Q ss_pred EEEEEeCCCcEEEcCEEEEccCCCCCCchh
Q 011267 284 VAAVKLEDGSTIDADTIVIGIGAKPTVSPF 313 (489)
Q Consensus 284 v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~ 313 (489)
+ -.+|.||++.|..++.+.+
T Consensus 79 -----~-----~~~d~vV~Spgi~~~~p~~ 98 (494)
T 4hv4_A 79 -----V-----LDASVVVVSTAISADNPEI 98 (494)
T ss_dssp -----G-----TTCSEEEECTTSCTTCHHH
T ss_pred -----c-----CCCCEEEECCCCCCCCHHH
Confidence 1 1379999999998876553
No 398
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.25 E-value=0.077 Score=51.74 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~ 240 (489)
..+|+|||+|.+|+.+|..|++.|.+|+++++..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4579999999999999999999999999999873
No 399
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.23 E-value=0.088 Score=51.38 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~ 240 (489)
++|+|||+|..|+++|..+++.|.+|.++++.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999754
No 400
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.21 E-value=0.084 Score=51.16 Aligned_cols=33 Identities=30% Similarity=0.435 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~ 239 (489)
...|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 457999999999999999999999999999975
No 401
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=93.20 E-value=0.078 Score=51.53 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
..++|+|||+|.+|+-+|..|+ .|.+|+++++.+.+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 3578999999999999999999 59999999988644
No 402
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.13 E-value=0.032 Score=55.95 Aligned_cols=79 Identities=16% Similarity=0.175 Sum_probs=57.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEE
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVA 285 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~ 285 (489)
.++++.|||.|.+|+.+|..|.++|.+|+..+....... . ..++ .|+++.. +... . .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~-----~------~~l~-~G~~~~~-g~~~---~-~------ 60 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG-----L------DKLP-EAVERHT-GSLN---D-E------ 60 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT-----G------GGSC-TTSCEEE-SSCC---H-H------
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch-----h------HHhh-CCCEEEE-CCCc---H-H------
Confidence 468899999999999999999999999999987754221 0 3356 7999887 5421 0 0
Q ss_pred EEEeCCCcEEEcCEEEEccCCCCCCchhh
Q 011267 286 AVKLEDGSTIDADTIVIGIGAKPTVSPFE 314 (489)
Q Consensus 286 ~v~~~~g~~i~aD~vi~a~G~~p~~~~~~ 314 (489)
.+ . .+|.||+++|..|+.+.+.
T Consensus 61 ~~------~-~~d~vV~s~gi~~~~p~~~ 82 (439)
T 2x5o_A 61 WL------M-AADLIVASPGIALAHPSLS 82 (439)
T ss_dssp HH------H-TCSEEEECTTSCTTCHHHH
T ss_pred Hh------c-cCCEEEeCCCCCCCCHHHH
Confidence 00 1 4789999999988765543
No 403
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.10 E-value=0.1 Score=46.84 Aligned_cols=37 Identities=24% Similarity=0.508 Sum_probs=32.5
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
..+.++|+|||||..|...+..|.+.|. +|+||+++.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA---~VtVvap~~ 64 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA---AITVVAPTV 64 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC---CEEEECSSC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 3567899999999999999999999875 799999864
No 404
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=93.05 E-value=0.085 Score=53.25 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=31.9
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 241 (489)
....+|+|||+|..|+-+|..|++.|.+|+++++.++
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~ 50 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSAR 50 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 3467899999999999999999999999999998754
No 405
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.68 E-value=0.12 Score=44.78 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=31.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHc-CCCCCcEEEEcCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEA 87 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~-g~~~~~V~li~~~~ 87 (489)
....+|+|||.|..|...|..|.+. |+ +|+++|+++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~---~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK---ISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS---CEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC---eEEEEECCH
Confidence 3456899999999999999999998 87 699998764
No 406
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=92.65 E-value=0.11 Score=52.94 Aligned_cols=37 Identities=30% Similarity=0.378 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
...+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 4578999999999999999999999999999998765
No 407
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.61 E-value=0.31 Score=39.87 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~ 239 (489)
.++++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999999999999999875
No 408
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.54 E-value=0.18 Score=42.22 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=33.2
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc
Q 011267 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 241 (489)
...++++|+|+|.+|..+|..|.+.|.+|+++++.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4578999999999999999999999999999987653
No 409
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.45 E-value=0.11 Score=50.83 Aligned_cols=35 Identities=26% Similarity=0.463 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
.+++|||+|.+|+.+|..|.+.|.+|+++++.+++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 47999999999999999999999999999987654
No 410
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.41 E-value=0.12 Score=51.77 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
.+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 57999999999999999999999999999987543
No 411
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.24 E-value=0.12 Score=51.39 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-cEEEEccCCc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH 241 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~-~V~lv~~~~~ 241 (489)
...|+|||+|..|+-+|..|++.|. +|+++++.+.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 4579999999999999999999999 9999998754
No 412
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=92.20 E-value=0.1 Score=51.18 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHh-CC-CcEEEEccCC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVG-WK-LDTTIIFPEN 240 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~-~g-~~V~lv~~~~ 240 (489)
.+|+|||+|..|+.+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 9999999875
No 413
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=92.18 E-value=0.14 Score=50.40 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
..+++|||+|+.|+-+|..|++.|.+|+++++.+++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 457999999999999999999999999999987654
No 414
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.15 E-value=0.2 Score=50.26 Aligned_cols=38 Identities=11% Similarity=0.209 Sum_probs=34.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
..+||||||||++|++||..|++.|+ +|+|+|+++..+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~---~V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGK---KVLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCCCCC
Confidence 56899999999999999999999987 699999998765
No 415
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=92.13 E-value=0.12 Score=50.90 Aligned_cols=36 Identities=19% Similarity=0.388 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCcEEEEccCCcc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHL 242 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~ 242 (489)
..+++|||+|..|+-+|..|++. |.+|+++++++++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 46899999999999999999998 9999999988654
No 416
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=92.06 E-value=0.29 Score=49.54 Aligned_cols=37 Identities=16% Similarity=0.345 Sum_probs=33.3
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
.+||+|||||++||+||..|++.|+ +|+|+|+++...
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~---~v~v~E~~~~~G 75 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGF---KTLLLEARDRIG 75 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTC---CEEEECSSSBSB
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC---CEEEEeCCCCCC
Confidence 3799999999999999999999986 799999987654
No 417
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.06 E-value=0.15 Score=41.72 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=29.6
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+.+|+|+|+|..|...+..|.+.|. +|+++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~---~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH---EVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4579999999999999999999886 688988753
No 418
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=91.99 E-value=0.37 Score=50.26 Aligned_cols=39 Identities=18% Similarity=0.321 Sum_probs=35.4
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
.+++||+|||+|..|...|..|.+.|. +|.+||++++.+
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~---~vl~id~~~~~g 44 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQ---RVLHVDSRSYYG 44 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCCccc
Confidence 347999999999999999999999987 699999999865
No 419
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.92 E-value=0.15 Score=54.21 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 241 (489)
..|+|||||..|+-+|..|++.|.+|+++++.+.
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 298 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCADAQ 298 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 5799999999999999999999999999998643
No 420
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.79 E-value=0.16 Score=53.95 Aligned_cols=33 Identities=15% Similarity=0.349 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~ 240 (489)
.+|+|||||..|+-+|..|++.|.+|+++++.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 579999999999999999999999999999864
No 421
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=91.63 E-value=0.16 Score=49.51 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=31.1
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
+++|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 5899999999999999999999999999987643
No 422
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.59 E-value=0.43 Score=45.08 Aligned_cols=75 Identities=20% Similarity=0.303 Sum_probs=48.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAV 287 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v 287 (489)
.+++|||+|.+|.-+|..|. .|.+|+++.|.+. -.+.+++.|+.+.. .... ... .+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~-------------~~~~l~~~G~~~~~-~~~~-~~~--------~~ 58 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQE-------------QAAAIQSEGIRLYK-GGEE-FRA--------DC 58 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH-------------HHHHHHHHCEEEEE-TTEE-EEE--------CC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHH-------------HHHHHHhCCceEec-CCCe-ecc--------cc
Confidence 47999999999999999999 9999999987631 11335566887765 3221 111 11
Q ss_pred EeCCCcEEEcCEEEEccCC
Q 011267 288 KLEDGSTIDADTIVIGIGA 306 (489)
Q Consensus 288 ~~~~g~~i~aD~vi~a~G~ 306 (489)
.......-++|.||+|+-.
T Consensus 59 ~~~~~~~~~~D~vilavK~ 77 (307)
T 3ego_A 59 SADTSINSDFDLLVVTVKQ 77 (307)
T ss_dssp EEESSCCSCCSEEEECCCG
T ss_pred cccccccCCCCEEEEEeCH
Confidence 1111111258999998654
No 423
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.58 E-value=0.11 Score=50.04 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCC------CcEEEEccCC
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWK------LDTTIIFPEN 240 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g------~~V~lv~~~~ 240 (489)
.|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999999874
No 424
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.51 E-value=0.21 Score=47.07 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=31.7
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
.+..++|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 12 ~~~~~~I~VIG~G~mG~~iA~~la~~G~---~V~~~d~~~ 48 (302)
T 1f0y_A 12 KIIVKHVTVIGGGLMGAGIAQVAAATGH---TVVLVDQTE 48 (302)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred cccCCEEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 3445689999999999999999999987 799998764
No 425
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.43 E-value=0.1 Score=48.42 Aligned_cols=37 Identities=19% Similarity=0.411 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
.+.++|+|||||-.|...+..|.+.|. +|+||+++..
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga---~VtViap~~~ 47 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGC---KLTLVSPDLH 47 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTC---EEEEEEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCCC
Confidence 456889999999999999999999976 7999998643
No 426
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.35 E-value=0.3 Score=46.25 Aligned_cols=85 Identities=16% Similarity=0.158 Sum_probs=52.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAV 287 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v 287 (489)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.+ . +.+++.|+.+.. ...-..+.+ + .+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~-------------~~i~~~g~~~~~-~~g~~~~~~-----~-~~ 60 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--Y-------------EAIAGNGLKVFS-INGDFTLPH-----V-KG 60 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--H-------------HHHHHTCEEEEE-TTCCEEESC-----C-CE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--H-------------HHHHhCCCEEEc-CCCeEEEee-----c-ee
Confidence 479999999999999999999999999998753 0 335667877653 211011100 0 01
Q ss_pred EeCCCc-EEEcCEEEEccCCCCCCchhhh
Q 011267 288 KLEDGS-TIDADTIVIGIGAKPTVSPFER 315 (489)
Q Consensus 288 ~~~~g~-~i~aD~vi~a~G~~p~~~~~~~ 315 (489)
. .+-+ .-.+|.||+|+-.....+.++.
T Consensus 61 ~-~~~~~~~~~D~vilavk~~~~~~~l~~ 88 (312)
T 3hn2_A 61 Y-RAPEEIGPMDLVLVGLKTFANSRYEEL 88 (312)
T ss_dssp E-SCHHHHCCCSEEEECCCGGGGGGHHHH
T ss_pred e-cCHHHcCCCCEEEEecCCCCcHHHHHH
Confidence 1 1111 1258999999776554444444
No 427
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=91.34 E-value=0.16 Score=48.50 Aligned_cols=66 Identities=15% Similarity=0.162 Sum_probs=45.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHh--CCCcEEEEccCCcchhhhh------C-HHHHHHHHHHHHhcCcEEEEcCceE
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHLLQRLF------T-PSLAQRYEQLYQQNGVKFVKVGASI 273 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~--~g~~V~lv~~~~~~l~~~~------~-~~~~~~l~~~l~~~Gv~~~~~~~~v 273 (489)
...|+|||+|+.|+-+|..|++ .|.+|+++++.+.+-.... + ..+...+.+.+++.|+++.. +...
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~-~~~~ 139 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYED-EGDY 139 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEE-CSSE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEE-CCcc
Confidence 4579999999999999999964 6999999998764421110 0 01112334556778988887 5443
No 428
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=91.31 E-value=0.15 Score=51.48 Aligned_cols=34 Identities=32% Similarity=0.462 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC--CcEEEEccCCc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENH 241 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g--~~V~lv~~~~~ 241 (489)
.+|+|||+|..|+-+|..|.+.| .+|+++++.++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 57999999999999999999999 99999998643
No 429
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.26 E-value=0.16 Score=50.80 Aligned_cols=36 Identities=17% Similarity=0.289 Sum_probs=31.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
+.++|+|||.|.+|+++|+.|+++|+ +|++.|....
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~---~v~~~D~~~~ 39 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGV---TPRVMDTRMT 39 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTC---CCEEEESSSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCC---EEEEEECCCC
Confidence 34689999999999999999999987 6999987654
No 430
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=91.22 E-value=0.2 Score=51.28 Aligned_cols=80 Identities=20% Similarity=0.136 Sum_probs=57.9
Q ss_pred cCCCcEEEECCCHHHHH-HHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCc
Q 011267 205 EKAKKVVVVGGGYIGME-VAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGR 283 (489)
Q Consensus 205 ~~~~~vvViG~G~~g~e-~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~ 283 (489)
...+++.+||-|-+|+- +|..|.++|.+|+..+.... ++ ..+.|++.|++++. +.....+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~------~~-----~~~~L~~~gi~~~~-G~~~~~~------- 77 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY------PP-----MSTQLEQAGVTIEE-GYLIAHL------- 77 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------TT-----HHHHHHHTTCEEEE-SCCGGGG-------
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC------cH-----HHHHHHHCCCEEEC-CCCHHHc-------
Confidence 46789999999999997 68889999999999987642 11 23457788999988 5311000
Q ss_pred EEEEEeCCCcEEEcCEEEEccCCCCCCchh
Q 011267 284 VAAVKLEDGSTIDADTIVIGIGAKPTVSPF 313 (489)
Q Consensus 284 v~~v~~~~g~~i~aD~vi~a~G~~p~~~~~ 313 (489)
.-.+|.||++.|..++.+.+
T Consensus 78 ----------~~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 78 ----------QPAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp ----------CSCCSEEEECTTCCTTSHHH
T ss_pred ----------CCCCCEEEECCCcCCCCHHH
Confidence 01479999999998876654
No 431
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.22 E-value=0.22 Score=48.24 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=32.8
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
+++|+|||||..|..+++.+++.|+ +++++|.++..+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~---~vv~vd~~~~~~ 37 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGM---KVVLVDKNPQAL 37 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCTTCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCCCCh
Confidence 5789999999999999999999998 799999877644
No 432
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.05 E-value=0.2 Score=51.62 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHh---CCCcEEEEccCC
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPEN 240 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~---~g~~V~lv~~~~ 240 (489)
...+|+|||||..|+-+|..|++ .|.+|+++++.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 35689999999999999999999 999999999864
No 433
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.89 E-value=0.22 Score=48.21 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=34.1
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
.....+|||+|+|.+|..+|+.|...|.+ +|+++|+....
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~Gli 228 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRKGIL 228 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTEEC
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCCcc
Confidence 34678999999999999999999999853 89999998443
No 434
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.81 E-value=0.23 Score=48.19 Aligned_cols=38 Identities=24% Similarity=0.417 Sum_probs=33.2
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
.....+|||+|+|.||+.+|+.|...|.+ +|+++|+..
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECCC
Confidence 34567999999999999999999999863 899999875
No 435
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.78 E-value=0.31 Score=40.64 Aligned_cols=33 Identities=12% Similarity=0.136 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~ 239 (489)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999875
No 436
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.75 E-value=0.27 Score=46.37 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccC
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~ 239 (489)
.++.|||+|.+|.-+|..|.+.|.+|+++.+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 47999999999999999999999999999765
No 437
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.74 E-value=0.23 Score=52.50 Aligned_cols=36 Identities=25% Similarity=0.518 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 241 (489)
..++|+|||+|..|+.+|..|.+.|.+|+++++.++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 457899999999999999999999999999997653
No 438
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.73 E-value=0.4 Score=45.50 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=29.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccC
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~ 239 (489)
...++.|||+|.+|.-+|..|.+.|.+|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4678999999999999999999999999998 54
No 439
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=90.72 E-value=0.29 Score=50.60 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCC
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~ 240 (489)
..-.|+|||||..|+-+|..|++.|.+|.++++.+
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34579999999999999999999999999999874
No 440
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=90.69 E-value=0.24 Score=53.76 Aligned_cols=35 Identities=23% Similarity=0.502 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 241 (489)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 46899999999999999999999999999997653
No 441
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.65 E-value=0.38 Score=45.57 Aligned_cols=39 Identities=21% Similarity=0.234 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 244 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 244 (489)
..++|.|||+|..|.-+|..++..|.+|++++..+..+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~ 43 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQIT 43 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 357899999999999999999999999999998765544
No 442
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.63 E-value=0.2 Score=44.62 Aligned_cols=32 Identities=28% Similarity=0.580 Sum_probs=29.0
Q ss_pred cEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 53 ~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+|+|||+|.-|...|..|.+.|+ +|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~---~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY---GVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 69999999999999999999886 699999764
No 443
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=90.53 E-value=0.16 Score=50.64 Aligned_cols=38 Identities=13% Similarity=0.306 Sum_probs=34.2
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
+.+||+|||+|++|+++|..|++.|. +|+++|+++..+
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~g 42 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGK---KVLHMDRNPYYG 42 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEecCCCcc
Confidence 46899999999999999999999987 699999987654
No 444
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=90.36 E-value=0.25 Score=49.50 Aligned_cols=133 Identities=14% Similarity=0.203 Sum_probs=78.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCChhH
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (489)
+.++|+|||.|.+|+++|+.|+++|+ +|++.|..+.. . ....+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~---~V~~~D~~~~~---~------------------------------~~~~~~ 51 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGA---IVTVNDGKPFD---E------------------------------NPTAQS 51 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTC---EEEEEESSCGG---G------------------------------CHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC---EEEEEeCCccc---C------------------------------ChHHHH
Confidence 46799999999999999999999987 79999875420 0 011345
Q ss_pred HHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcCCCc
Q 011267 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKK 209 (489)
Q Consensus 130 ~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~~ 209 (489)
+++.|+++..+... +. + + ++ .+|.+|+++|..+. .|......-.++..+... +-+.. +...+-
T Consensus 52 L~~~gi~~~~g~~~-----~~--~-~-~~---~~d~vv~spgi~~~-~p~~~~a~~~gi~v~~~~---e~~~~-~~~~~~ 114 (451)
T 3lk7_A 52 LLEEGIKVVCGSHP-----LE--L-L-DE---DFCYMIKNPGIPYN-NPMVKKALEKQIPVLTEV---ELAYL-VSESQL 114 (451)
T ss_dssp HHHTTCEEEESCCC-----GG--G-G-GS---CEEEEEECTTSCTT-SHHHHHHHHTTCCEECHH---HHHHH-HCCSEE
T ss_pred HHhCCCEEEECCCh-----HH--h-h-cC---CCCEEEECCcCCCC-ChhHHHHHHCCCcEEeHH---HHHHH-hcCCCE
Confidence 67789988876431 10 0 0 00 27899999997654 232111111233333322 22222 223344
Q ss_pred EEEECC-C--HHHHHHHHHHHhCCCcEEE
Q 011267 210 VVVVGG-G--YIGMEVAAAAVGWKLDTTI 235 (489)
Q Consensus 210 vvViG~-G--~~g~e~A~~l~~~g~~V~l 235 (489)
+.|-|+ | -+...++..|...|.++.+
T Consensus 115 IaVTGTnGKTTTt~ml~~iL~~~g~~~~~ 143 (451)
T 3lk7_A 115 IGITGSNGKTTTTTMIAEVLNAGGQRGLL 143 (451)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEECCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 555554 2 3445567777888877644
No 445
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.14 E-value=0.27 Score=49.98 Aligned_cols=127 Identities=18% Similarity=0.248 Sum_probs=72.0
Q ss_pred CCCCcEEEEcCchHHHH-HHHHHHHcCCCCCcEEEEcCCCCCCCCCCCCccccCCCCCCCCCCCCCCccccCCCCCCCCh
Q 011267 49 NENREFVIVGGGNAAGY-AARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~-aA~~L~~~g~~~~~V~li~~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (489)
...++|.|||-|-+|++ +|+.|+++|+ +|++.|.... ...
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~---~V~~~D~~~~------------------------------------~~~ 60 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGY---QISGSDLAPN------------------------------------SVT 60 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTC---EEEEECSSCC------------------------------------HHH
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCC---eEEEEECCCC------------------------------------HHH
Confidence 34578999999999997 6999999987 7998875421 012
Q ss_pred hHHHHCCcEEEeCCcEEEEeCCCCEEEeCCCeEEeeCcEEecCCCCCCCCCCCCCCCCCceEeecCHHHHHHHHHhhcCC
Q 011267 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKA 207 (489)
Q Consensus 128 ~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~i~yd~lvlATG~~~~~~p~~~g~~~~gv~~~~~~~~~~~~~~~~~~~ 207 (489)
+.+++.|+++..+.. .+. + -.+|.+|+.+|..+. -|......-.++..+... +-+...+ ..
T Consensus 61 ~~l~~~gi~~~~g~~-----~~~----~-----~~~d~vV~Spgi~~~-~p~~~~a~~~gi~v~~~~---e~l~~~~-~~ 121 (494)
T 4hv4_A 61 QHLTALGAQIYFHHR-----PEN----V-----LDASVVVVSTAISAD-NPEIVAAREARIPVIRRA---EMLAELM-RY 121 (494)
T ss_dssp HHHHHTTCEEESSCC-----GGG----G-----TTCSEEEECTTSCTT-CHHHHHHHHTTCCEEEHH---HHHHHHH-TT
T ss_pred HHHHHCCCEEECCCC-----HHH----c-----CCCCEEEECCCCCCC-CHHHHHHHHCCCCEEcHH---HHHHHHh-cC
Confidence 345677888887621 111 1 137899999997653 232111111233333322 2222222 23
Q ss_pred Cc-EEEECC-C--HHHHHHHHHHHhCCCcE
Q 011267 208 KK-VVVVGG-G--YIGMEVAAAAVGWKLDT 233 (489)
Q Consensus 208 ~~-vvViG~-G--~~g~e~A~~l~~~g~~V 233 (489)
++ +.|-|+ | -+...++..|...|.+.
T Consensus 122 ~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~ 151 (494)
T 4hv4_A 122 RHGIAVAGTHGKTTTTAMLSSIYAEAGLDP 151 (494)
T ss_dssp SEEEEEECSSSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEecCCChHHHHHHHHHHHHhcCCCC
Confidence 33 555553 2 34455666777777653
No 446
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=90.02 E-value=0.32 Score=49.26 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCC-CcEEEEccCCcc
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHL 242 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g-~~V~lv~~~~~~ 242 (489)
...+++|||+|+.|+-+|..|.+.| .+|+++++.+++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 3568999999999999999999998 799999988654
No 447
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.94 E-value=0.37 Score=39.09 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=29.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~ 239 (489)
..+++|+|+|.+|..+|..|.+.|.+|+++++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 357999999999999999999999999999764
No 448
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=89.88 E-value=0.17 Score=50.61 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC-CcEEEEcc
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFP 238 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g-~~V~lv~~ 238 (489)
.+|+|||+|..|+.+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 449
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.67 E-value=0.32 Score=44.44 Aligned_cols=37 Identities=22% Similarity=0.401 Sum_probs=32.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
...+|+|||+|-.|..+|..|++.|. ++|+|+|.+..
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv--~~i~lvD~d~v 66 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGV--GNLTLLDFDTV 66 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECCCBC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCC--CeEEEEcCCCc
Confidence 35689999999999999999999986 48999998753
No 450
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.52 E-value=0.32 Score=38.04 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=29.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CcEEEEccC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPE 239 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g-~~V~lv~~~ 239 (489)
.++++|+|+|.+|..++..|.+.| .+|+++.+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 889888775
No 451
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=89.48 E-value=0.38 Score=49.81 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP 161 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 458999999999999999999999999999987643
No 452
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.36 E-value=0.56 Score=44.84 Aligned_cols=77 Identities=16% Similarity=0.248 Sum_probs=49.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHhcCcEEEEcCceEEEEEeCCCCcEEEE
Q 011267 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKVGASIKNLEAGSDGRVAAV 287 (489)
Q Consensus 208 ~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~~~~~~~~v~~i~~~~~~~v~~v 287 (489)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.+ . .+.+++.|+.+.. ... . .... + .+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~---------~-----~~~~~~~g~~~~~-~~~-~-~~~~----~-~~ 61 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARGA---------T-----LQALQTAGLRLTE-DGA-T-HTLP----V-RA 61 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH---------H-----HHHHHHTCEEEEE-TTE-E-EEEC----C-EE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH---------H-----HHHHHHCCCEEec-CCC-e-EEEe----e-eE
Confidence 579999999999999999999999999987531 1 1235667877654 211 1 1100 0 11
Q ss_pred EeCCC-cEEEcCEEEEccCCC
Q 011267 288 KLEDG-STIDADTIVIGIGAK 307 (489)
Q Consensus 288 ~~~~g-~~i~aD~vi~a~G~~ 307 (489)
..+- ..-.+|.||+|+-..
T Consensus 62 -~~~~~~~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 62 -THDAAALGEQDVVIVAVKAP 81 (335)
T ss_dssp -ESCHHHHCCCSEEEECCCHH
T ss_pred -ECCHHHcCCCCEEEEeCCch
Confidence 1121 112589999998653
No 453
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.18 E-value=0.42 Score=38.89 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~ 239 (489)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568999999999999999999999999998765
No 454
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=89.15 E-value=0.43 Score=46.71 Aligned_cols=35 Identities=17% Similarity=0.139 Sum_probs=30.7
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
..+|+|||+|.+|+.+|..++..|. +|+++|..+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGA---VVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC---EEEEEcCCHH
Confidence 4689999999999999999999876 7999887653
No 455
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.99 E-value=0.46 Score=45.05 Aligned_cols=37 Identities=11% Similarity=0.270 Sum_probs=31.8
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
.++..+|.|||+|..|.+.|..|++.|. .+|+++|..
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~ 41 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIP 41 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEecc
Confidence 3456789999999999999999999876 479999875
No 456
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.93 E-value=0.46 Score=44.23 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=30.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+.++|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~---~V~l~d~~~ 37 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGF---AVTAYDINT 37 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCH
Confidence 35689999999999999999999987 799988764
No 457
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.90 E-value=0.44 Score=45.26 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=31.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
++.+|+|||+|..|.++|..|...+. -.+|+++|.++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~-~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQT-ANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC-SSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 34689999999999999999999876 55899999764
No 458
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.68 E-value=0.37 Score=46.60 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=31.5
Q ss_pred CCCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 47 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 47 ~~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
|.+++.+|.|||+|.-|.+.|..|++.|+ +|+++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~---~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQ---KVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTC---CEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 33445689999999999999999999986 699998864
No 459
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=88.59 E-value=0.51 Score=44.91 Aligned_cols=38 Identities=11% Similarity=0.187 Sum_probs=31.6
Q ss_pred CCCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 48 ~~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
.|++.+|.|||+|..|.+.|..|...+. . +|+|+|..+
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~-~-~v~L~Di~~ 41 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKEL-G-DVVLFDIAE 41 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTC-C-EEEEECSSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCC-C-eEEEEeCCc
Confidence 3556789999999999999999999886 3 899998754
No 460
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.41 E-value=0.53 Score=44.84 Aligned_cols=36 Identities=14% Similarity=0.370 Sum_probs=31.1
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
...+|.|||+|..|.++|..|+..+. -.+|+++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~-~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGI-TDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEecc
Confidence 45689999999999999999999886 4589999874
No 461
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=88.28 E-value=0.33 Score=44.89 Aligned_cols=34 Identities=24% Similarity=0.492 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccC
Q 011267 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (489)
Q Consensus 206 ~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~ 239 (489)
.+++++|||+|-+|...+..|.+.|.+|+++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5789999999999999999999999999999865
No 462
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.12 E-value=0.7 Score=42.99 Aligned_cols=38 Identities=21% Similarity=0.239 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 244 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 244 (489)
-++|.|||+|.+|..+|..++..|.+|+++++.+..+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~ 41 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALD 41 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence 46899999999999999999999999999988764443
No 463
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=88.05 E-value=0.48 Score=47.61 Aligned_cols=36 Identities=28% Similarity=0.461 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-cEEEEccCCcc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHL 242 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~-~V~lv~~~~~~ 242 (489)
..+++|||+|..|+-+|..|.+.|. +|+++++.+++
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 4579999999999999999999998 89999987654
No 464
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.01 E-value=0.46 Score=46.11 Aligned_cols=35 Identities=17% Similarity=0.070 Sum_probs=30.7
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
...+|+|||+|..|+.+|+.++..|. +|+++|+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA---KTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 35689999999999999999999986 799998764
No 465
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.95 E-value=0.64 Score=44.55 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=31.4
Q ss_pred CCCCcEEEEcC-chHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 49 NENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 49 ~~~~~vvIIGg-G~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
+++.+|+|||+ |..|.++|..+...|. ..+|+++|..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~ 43 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPF 43 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 34578999997 9999999999999886 4589999864
No 466
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.54 E-value=0.56 Score=44.53 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=29.5
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
.+|.|||+|.-|.+.|..|.+.|. +|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH---CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC---EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC---eEEEEeCCh
Confidence 579999999999999999999876 799988753
No 467
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.46 E-value=0.54 Score=42.93 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=32.6
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
...+|+|||+|-.|..+|..|++.|. ++++|+|.+..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gv--g~i~lvD~d~v 63 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGV--GTLVLADDDDV 63 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTC--SEEEEECCCBC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCC--CeEEEEeCCCc
Confidence 35789999999999999999999997 38999998753
No 468
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.43 E-value=0.63 Score=44.14 Aligned_cols=37 Identities=19% Similarity=0.366 Sum_probs=31.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
+++.+|+|||+|..|.++|..|...+. -.+|.++|.+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~-~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSI-VDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCS-CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 345689999999999999999998875 4579998864
No 469
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.39 E-value=0.63 Score=44.38 Aligned_cols=37 Identities=19% Similarity=0.534 Sum_probs=33.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
...+|+|||+|-.|-.+|..|+..|. ++++|+|.+..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGV--g~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGV--RKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCC--CEEEEecCCEe
Confidence 46789999999999999999999997 48999998754
No 470
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=86.99 E-value=0.66 Score=44.34 Aligned_cols=33 Identities=21% Similarity=0.445 Sum_probs=29.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
..+|.|||+|.-|.+.|..|.+.|+ +|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~---~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE---AINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC---CEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC---EEEEEECh
Confidence 4589999999999999999999886 69998763
No 471
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=86.98 E-value=0.77 Score=43.85 Aligned_cols=35 Identities=9% Similarity=0.209 Sum_probs=30.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+.+|+|||+|..|.+.|..|++.|+ .+|+|+|.++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~--~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALREL--ADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC--CEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEECCh
Confidence 4589999999999999999999875 2599998764
No 472
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.95 E-value=0.5 Score=47.37 Aligned_cols=36 Identities=36% Similarity=0.565 Sum_probs=31.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
.+.++|+|||+|..|...+..|.+.|. +|++++++.
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga---~V~vi~~~~ 45 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGA---RLTVNALTF 45 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTB---EEEEEESSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC---EEEEEcCCC
Confidence 356789999999999999999999875 799999864
No 473
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=86.95 E-value=0.72 Score=42.70 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=30.5
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
++++|+|.|+|+-|...+..|.+.|+ +|+++++..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~---~V~~~~r~~ 36 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH---EVTGLRRSA 36 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC---CEEEEECTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCc
Confidence 34679999999999999999999987 699988764
No 474
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.90 E-value=1.2 Score=39.48 Aligned_cols=32 Identities=25% Similarity=0.403 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCcEEEEccCC
Q 011267 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (489)
Q Consensus 209 ~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~ 240 (489)
+++|+|+|.+|..+|..|.+.|.+|+++++.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 68999999999999999999999999998653
No 475
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.89 E-value=0.61 Score=40.04 Aligned_cols=34 Identities=18% Similarity=0.084 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCcEEEEccCC
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPEN 240 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~-g~~V~lv~~~~ 240 (489)
+.+++|+|.|.+|..+|..|.+. |.+|+++++.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 56899999999999999999999 99999998753
No 476
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.82 E-value=0.76 Score=40.57 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=30.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
...+|.|||+|.-|.+.|..|.+.|+ +|+++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~---~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH---EVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC---EEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCHH
Confidence 45689999999999999999999886 7999987654
No 477
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.81 E-value=0.57 Score=43.74 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=32.9
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
...+|+|||+|-.|-.+|..|++.|. ++++|+|.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV--G~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI--GKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC--CEEEEECCCcc
Confidence 45789999999999999999999996 48999998753
No 478
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=86.74 E-value=0.8 Score=43.49 Aligned_cols=37 Identities=16% Similarity=0.303 Sum_probs=31.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
|+..+|.|||+|..|.+.|..|+..+. . +|+|+|.++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~-~-~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQL-G-DVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-C-EEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-c-eEEEEeCCh
Confidence 445789999999999999999999876 3 899998764
No 479
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=86.64 E-value=0.6 Score=48.86 Aligned_cols=36 Identities=28% Similarity=0.257 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcc
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 242 (489)
...++|||+|..|+.+|..|++.|.+|+++++.+..
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~ 81 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEID 81 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCC
Confidence 347999999999999999999999999999987643
No 480
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.58 E-value=0.82 Score=43.32 Aligned_cols=36 Identities=11% Similarity=0.362 Sum_probs=31.0
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
+..+|+|||+|..|.+.|..|+..+. ..+|+++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~-~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGI-ADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 45689999999999999999998875 4579999875
No 481
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.35 E-value=0.69 Score=43.49 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=28.6
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
.+|.|||+|.-|...|..|.+.|+ +|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN---DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC---cEEEEECC
Confidence 479999999999999999999886 79998764
No 482
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.29 E-value=0.63 Score=43.97 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=28.3
Q ss_pred CcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 52 ~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
.+|.|||+|.-|.+.|..|.+.|. +|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE---DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC---CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---eEEEEEcC
Confidence 579999999999999999999886 69998875
No 483
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.14 E-value=0.71 Score=45.37 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=30.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
..+|+|||+|.+|+.++..++..|. +|+++|..+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGA---IVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCH
Confidence 5689999999999999999999875 799988764
No 484
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.12 E-value=0.79 Score=43.35 Aligned_cols=36 Identities=11% Similarity=0.275 Sum_probs=30.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+.+|+|||+|..|...|..|.+.|+ ..+|+++|.++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 3589999999999999999999875 34799998753
No 485
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=86.08 E-value=0.25 Score=49.67 Aligned_cols=110 Identities=17% Similarity=0.268 Sum_probs=63.4
Q ss_pred CceEeecCHHHHHHHHHhh----cCCCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchhhhhCHHHHHHHHHHHHh
Q 011267 186 PGVHYIRDVADADALISSL----EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ 261 (489)
Q Consensus 186 ~gv~~~~~~~~~~~~~~~~----~~~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~~l~~~l~~ 261 (489)
+.++.+.+..+..++.+.+ ...++++|+|||.+|..+|..|.+ ..+|+++++.. +-.+.+.+.|.
T Consensus 210 D~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d~---------~r~~~la~~l~- 278 (461)
T 4g65_A 210 DEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERNL---------QRAEKLSEELE- 278 (461)
T ss_dssp CEEEEEEETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCH---------HHHHHHHHHCT-
T ss_pred CEEEEEeccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhh-cCceEEEecCH---------HHHHHHHHHCC-
Confidence 3455444444455554443 245789999999999999999865 47899998653 33444445443
Q ss_pred cCcEEEEcCceEEEEEeCCCCcEEEEEeCCCcEEEcCEEEEccCCCCCC----chhhhcCCe
Q 011267 262 NGVKFVKVGASIKNLEAGSDGRVAAVKLEDGSTIDADTIVIGIGAKPTV----SPFERVGLN 319 (489)
Q Consensus 262 ~Gv~~~~~~~~v~~i~~~~~~~v~~v~~~~g~~i~aD~vi~a~G~~p~~----~~~~~~gl~ 319 (489)
+..++. + ++.-..+ +.....-++|.+|.+|+..-.. -+++++|.+
T Consensus 279 -~~~Vi~-G----------D~td~~~-L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~ 327 (461)
T 4g65_A 279 -NTIVFC-G----------DAADQEL-LTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAK 327 (461)
T ss_dssp -TSEEEE-S----------CTTCHHH-HHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCS
T ss_pred -CceEEe-c----------cccchhh-HhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCc
Confidence 233433 1 2210011 1122235789999999864211 135556653
No 486
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.02 E-value=0.58 Score=41.70 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=29.9
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEE-EcCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCI-VSKEA 87 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~l-i~~~~ 87 (489)
|++.+|.|||+|.-|.+.|..|.+.|+ +|++ +++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~---~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQI---PAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTC---CEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEECCCH
Confidence 445689999999999999999999886 6887 66543
No 487
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.87 E-value=0.68 Score=43.84 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=30.3
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
...+|.|||+|.-|...|..++..|+ +|+|+|.++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~---~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 35689999999999999999999988 699999865
No 488
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=85.77 E-value=0.89 Score=43.20 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=31.7
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
....+|+|||+|..|.++|..|+..+. -.++.|+|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~-~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGI-AQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-CCeEEEEeCC
Confidence 455789999999999999999999886 4589999874
No 489
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.75 E-value=0.65 Score=45.85 Aligned_cols=35 Identities=14% Similarity=0.376 Sum_probs=31.0
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
+.+|+|||.|..|...|..|.+.|+ +|++||.++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~---~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV---KMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC---CEEEEECCHH
Confidence 4579999999999999999999987 6999998753
No 490
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.69 E-value=0.69 Score=43.88 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=30.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+...+|.|||+|.-|...|..|++.|+ +|+++|.++
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~---~V~l~d~~~ 39 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEP 39 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 345789999999999999999999987 699998764
No 491
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=85.69 E-value=1.2 Score=43.45 Aligned_cols=39 Identities=21% Similarity=0.388 Sum_probs=33.2
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~~ 90 (489)
...++|+|||+|..|...+..+++.|+ ++.++|..+..|
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~---~vi~~d~~~~~~ 50 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGY---KIAVLDPTKNSP 50 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSTTCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCCCCc
Confidence 356789999999999999999999988 699998776543
No 492
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.49 E-value=0.91 Score=44.32 Aligned_cols=35 Identities=20% Similarity=0.113 Sum_probs=30.4
Q ss_pred CCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 50 ~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
...+|+|||+|.+|+.++..++..|. +|+++|..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA---VVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46789999999999999999999875 699988764
No 493
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.41 E-value=0.86 Score=42.87 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=30.5
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+.+|.|||+|..|...|..|...++ -.+|+|+|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~-~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGI-ADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-CCEEEEEcCCc
Confidence 4689999999999999999998886 55799998754
No 494
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=85.32 E-value=0.9 Score=42.76 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=29.9
Q ss_pred cEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 53 ~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
+|+|||+|..|.+.|..|+..|+ ..+|+++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~-~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGS-CSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCH
Confidence 69999999999999999999886 45799999764
No 495
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=85.24 E-value=0.4 Score=50.71 Aligned_cols=38 Identities=21% Similarity=0.337 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC--------CcEEEEccCC-cchh
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWK--------LDTTIIFPEN-HLLQ 244 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g--------~~V~lv~~~~-~~l~ 244 (489)
.++|+|||+|+.|+-+|..|.+.| .+|+++++.+ ++..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~ 102 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLH 102 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccccc
Confidence 357999999999999999999988 8999999998 8754
No 496
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.24 E-value=0.85 Score=43.83 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=29.1
Q ss_pred CCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCC
Q 011267 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (489)
Q Consensus 51 ~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~ 86 (489)
+.+|.|||+|.-|...|..|.+.|+ +|+++++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~---~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ---SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC---EEEEEeCC
Confidence 4589999999999999999999876 69998765
No 497
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=85.20 E-value=0.76 Score=45.24 Aligned_cols=41 Identities=15% Similarity=0.290 Sum_probs=34.8
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~~ 89 (489)
....+|||.|+|.||+.+|..|.+.|.+..+|.++|+....
T Consensus 217 l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli 257 (487)
T 3nv9_A 217 IHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSL 257 (487)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEEC
T ss_pred hhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccc
Confidence 34678999999999999999999999744689999987543
No 498
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=85.12 E-value=0.96 Score=42.66 Aligned_cols=36 Identities=11% Similarity=0.219 Sum_probs=30.9
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~ 87 (489)
.++.+|.|||.|.-|...|..|++.|+ +|+++++.+
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~---~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGF---KVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 345789999999999999999999987 699887653
No 499
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.91 E-value=1.3 Score=41.95 Aligned_cols=38 Identities=21% Similarity=0.244 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCcEEEEccCCcchh
Q 011267 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 244 (489)
Q Consensus 207 ~~~vvViG~G~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 244 (489)
-++|.|||+|..|.-+|..+++.|.+|+++++.+.-+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~ 43 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQIT 43 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 46899999999999999999999999999988764433
No 500
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=84.83 E-value=1.4 Score=43.99 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=32.3
Q ss_pred CCCCcEEEEcCchHHHHHHHHHHHcCCCCCcEEEEcCCCC
Q 011267 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (489)
Q Consensus 49 ~~~~~vvIIGgG~AGl~aA~~L~~~g~~~~~V~li~~~~~ 88 (489)
+...+|.|||+|.-|...|..|++.|+ +|+++|.++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~---~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGI---ETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC---eEEEEECcHH
Confidence 345789999999999999999999987 7999998754
Done!